Seed sequence alignment for RF03069

URS0000D6C7C0_12908/1-185 unclassified sequences 0.0 URS0000D6571E_12908/1-176 unclassified sequences 0.0 URS0000D690BE_445972/1-184 Anaerotruncus colihominis DSM 17241 0.0 URS0000D690BE_12908/1-184 unclassified sequences 0.0 URS0000D6C2A9_411467/1-204 Pseudoflavonifractor capillosus ATCC 29799 0.0 URS0000D6B288_12908/1-180 unclassified sequences 0.0 URS0000D6943B_12908/1-179 unclassified sequences 0.0 URS0000D6BE6C_411475/1-178 Flavonifractor plautii ATCC 29863 0.0 URS0000D677CF_649724/1-178 Clostridium sp. ATCC BAA-442 0.0 URS0000D677CF_658087/1-178 Lachnospiraceae bacterium 7_1_58FAA 0.0 URS0000D677CF_12908/1-178 unclassified sequences 0.0 URS0000D6694E_12908/1-183 unclassified sequences 0.0 URS0000D68BFC_12908/1-182 unclassified sequences 0.0 URS0000D67CAA_12908/1-182 unclassified sequences 0.0 URS0000D65736_12908/1-182 unclassified sequences 0.0 URS0000D65AE0_12908/1-182 unclassified sequences 0.0 URS0000D67073_12908/1-173 unclassified sequences 0.0 URS0000D6796C_12908/1-177 unclassified sequences 0.0 URS0000D6B717_12908/1-183 unclassified sequences 0.0 URS0000D6BAB3_12908/1-183 unclassified sequences 0.0 URS0000D6B014_12908/1-183 unclassified sequences 0.0 URS0000D69E57_12908/1-183 unclassified sequences 0.0 URS0000D6838B_12908/1-181 unclassified sequences 0.0 URS0000D6843D_12908/1-184 unclassified sequences 0.0 URS0000D6B82B_12908/1-184 unclassified sequences 0.0 URS0000D694FC_12908/1-184 unclassified sequences 0.0 URS0000D69B01_12908/1-184 unclassified sequences 0.0 URS0000D68D76_12908/1-184 unclassified sequences 0.0 URS0000D683A1_12908/1-184 unclassified sequences 0.0 URS0000D65B04_1263000/1-184 Firmicutes bacterium CAG:110 0.0
UUAAACUAGAAA.G.A...AAGACUCCACGAUAAa............................................GCUUUCUG.U..GCAAa.....CAAAGCAAAGGAGGAAAAAAUU...................CCGC.-AGGCUU.GCGGUGCGGCAGUGU.GGAG............ACCUGCCGUA.AUGCGGCGCACUc............UUCUACc.....................................................gGGUG-GCUGCGAGGUGAUCG--.GGCGGAG........GCC...UGAUCA.UCAGAGUCU-UaauaAAAUAUGGCU UCUGGUAUGGGG.G.A...ACUACUU-ACCAACA.............................................UGGUUUUU.C..UA--......UGCCAACAAGAAGGAAAUAU--...................CCGU.CGGAUUC.ACGGUGAGGCAGUGU.GGAG............ACCUGCCGUA.GUGUAUCUGGAA.............UUUGCU.......................................................UUCCGGUUGUAAGAACGCAU--.---GCGAaaugguag---...GUGCGU.UUAGAGCCAGA....AAUAAUGGCA AUAGGCUGCAGG.C.C...UCUACUCCUACUUUA.............................................UAGGGGCG.U..GUAAgc....CAUAAAAAAGGAGGAAGCAAAUc..................CCGU.CGGGCCG.GCGGUGCGGCAGUGU.GGAG............ACCUGUCGUA.AUGUCCGUGCAG.............GUUCGCu......................................................CUGCGCGGAUAAGGGGCG---CuUGCGGGA........GCAgg.-UAGUC.CCACGGCUUGU....AUACAUGGCA AUAGGCUGCAGG.C.C...UCUACUCCUACUUUA.............................................UAGGGGCG.U..GUAAgc....CAUAAAAAAGGAGGAAGCAAAUc..................CCGU.CGGGCCG.GCGGUGCGGCAGUGU.GGAG............ACCUGUCGUA.AUGUCCGUGCAG.............GUUCGCu......................................................CUGCGCGGAUAAGGGGCG---CuUGCGGGA........GCAgg.-UAGUC.CCACGGCUUGU....AUACAUGGCA UCAGGCGAGGCG.G.G...GCUACUCCAACUUUAaauuacauacuaauuuaaua.........................UAGGCCCG.U..CUCCc.....CGUAAAAAAGGAGGAGACCAAAau.................CCGC.CGGGUCG.GCGGUGCGGCAGUGU.GGAG............ACCUGCUGUA.AAGCAUACGGGG.............UUUUGCu......................................................CCCCGGAUGCAAGGCUGUAUU-.UGCGGAG........GCAu..-UGCAG.UCACGGCCCGU....GUACAUGGCA AAAGGCAUCCCA.U.U...UCUACUCCAUUUCAA.............................................UAGAAAUG.G..GGGAgc....CGUAAAAAAGGAGGAAAACC--...................CCGC.CGGGCCG.GCGGUGCGGCAGUGU.GGAG............ACCUGUCGUA.ACGUCCGCAGGA.............CCAAGC.......................................................GCCUGCGGACAAGGGGGUAGG-.UGCGAAG........GCU...CUGCCC.UUACGGCCCAU....GCGCAUGGCA UCAAGCCUUCCG.A.C...CCUACUCCAUUUUCAg............................................UAGGG-CG.G..AGGAgc....GGUCAAAAAGGNGGAACGC---...................CCGC.CGGGCCG.GCGGUGCGGCAGUGU.GGAG............ACCUGCCGUA.ACGUCCGCAGAG.............UGACGCu......................................................CUCUGCGGGCAAGAGGGUAUU-.UGCGGAG........GCA...UUGCCC.UUACGGCCCU-....GAACAUGGCA UCAAGCCUUCCG.A.C...CCUACUCCAUUUUCA.............................................UAGGG-CG.G..AGGAgc....GGUCAAAAAGGAGGAACGU---...................CCGC.CGGGCCG.GCGGUGCGGCAGUGU.GGAG............ACCUGCCGUA.ACGUCCGCAGAG.............UGACGCu......................................................CUCUGCGGGCAAGAGGGUAUU-.UGCGGAG........GCA...UUGCCC.UUACGGCCCU-....GAACAUGGCA UCAAGCCUUCCG.A.C...CCUACUCCAUUUUCA.............................................UAGGG-CG.G..AGGAgc....GGUCAAAAAGGAGGAACGC---...................CCGC.CGGGCCG.GCGGUGCGGCAGUGU.GGAG............ACCUGCCGUA.ACGUCCGCAGAG.............UGACGCu......................................................CUCUGCGGGCAAGAGGGUAUU-.UGCGGAG........GCA...UUGCCC.UUACGGCCCU-....GAACAUGGCA UCAAGCCUUCCG.A.C...CCUACUCCAUUUUCA.............................................UAGGG-CG.G..AGGAgc....GGUCAAAAAGGAGGAACGC---...................CCGC.CGGGCCG.GCGGUGCGGCAGUGU.GGAG............ACCUGCCGUA.ACGUCCGCAGAG.............UGACGCu......................................................CUCUGCGGGCAAGAGGGUAUU-.UGCGGAG........GCA...UUGCCC.UUACGGCCCU-....GAACAUGGCA UCAAGCCUUCCG.A.C...CCUACUCCAUUUUCA.............................................UAGGG-CG.G..AGGAgc....GGUCAAAAAGGAGGAACGC---...................CCGC.CGGGCCG.GCGGUGCGGCAGUGU.GGAG............ACCUGCCGUA.ACGUCCGCAGAG.............UGACGCu......................................................CUCUGCGGGCAAGAGGGUAUU-.UGCGGAG........GCA...UUGCCC.UUACGGCCCU-....GAACAUGGCA UUAGGCGCCGGA.C.C...GCUACUCCAUUCCCA.............................................UAGCGG-A.C..GGCAgc....UGUCAAAAAGGAGGAAAAAU--...................CCGC.CGAGCCG.GCGGUGCGGCAGUGU.GGAG............ACCUGUCGUA.AAGCC-CCGGGAg............UUUCGCu.....................................................cUCCCGGCGGCGAGGGGACAGCA.AGCGGAU........GCU...CUGUCC.CUGCGGCUCUU...cAUUUAUGGCU UACCGAGCGGCU.U.C...CGCUCUCCACCUUACg............................................AGCGG--U.A..CGCGgu....UCGAUGAAAGGAGUUUGUUUUCc..................CCGC.AGGAUCC.GCGGUGCGGCAGUGU.GGAG............ACCUGCCGUA.UAGCCUCCGU--.............ACAUUCaucg...................................................--GCGGAGGUAAGGUCUGAGC-.AGCGGAG........GCU...CUCAGA.UCAGGAUCGGU....ACGCAUGGCA UACCGAACGGCU.U.C...CGCUCUCCACCUUACg............................................AGCGGUAU.G..CGGU......UCGAUGAAAGGAGUUUGUUUUCc..................CCGC.AGGAUCC.GCGGUGCGGCAGUGU.GGAG............ACCUGCCGUA.UGUCCUCCGU--.............ACAUUCaucg...................................................--GCGGAGGUAAGGUCUGAGC-.AGCGGAG........GCU...CUCAGA.UCAGGAUCGGU....ACGCAUGGCA UACCGAACGGCU.U.C...CGCUCUCCACCUUACg............................................AGCGGUAC.G..CGGU......UCGAUGAAAGGAGUUUGUUUUCc..................CCGC.AGGAUCC.GCGGUGCGGCAGUGU.GGAG............ACCUGCCGUA.UGUCCUCCGU--.............ACAUUCaucg...................................................--GCGGAGGUAAGGUCUGAGC-.AGCGGAG........GCU...CUCAGA.UCAGGAUCGGU....ACACAUGGCA UACCGAACGGCU.U.C...CGCUCUCCACCUUACg............................................AGCGGUAC.G..CGGU......UCGAUGAAAGGAGUUUGUUUUCc..................CCGC.AGGAUCC.GCGGUGCGGCAGUGU.GGAG............ACCUGCCGUA.UGUCCUCCGUAC.............AUUUAUc......................................................G-GCGGAGGUAAGGUCUGAGC-.AGCGGAG........GCU...CUCAGA.UCAGGAUCGGU....ACACAUGGCA UAAAAUGGAUUG.C.G...CCUACUCCACUAAAA.............................................UAGACGCU.G..UUC-......AUUAAAAAAGGAGGAAAAAC--...................CCGU.UAGGUUC.ACGGUGCGGCAGAGU.GGAG............ACCUGUCGUA.ACGCGCAGCGC-.............CAAAG-.......................................................-GCG-UGCGCGAGAGCAUUUG-.CGCGGAG........GUG...CUGUGC.UCAGAGCCAAA....UGUAAUGGCA GAUCAUGGGCUG.C.G...UCUACUCCACCACAA.............................................UAGGCGCG.G..UUC-......UGAAAAUAAGGAGGAAAAAACAuu.................CCGU.CAGAUUC.ACGGUGCGGCAGUGU.GGAG............ACCUGUCGUA.AUGCGGAGGGU-.............CAAAAA.......................................................-ACC-UCCGCGAGAGCAUUUG-.CGCGGAG........GCG...CAAUGC.UUAGAAUCAAA....-ACUAUGGCU AUACAUGGUGUC.C.G...CCUACUCCACGAUA-.............................................UAGACGGG.C..AUAC......AUACGAAAAGGAGGUUACCCCAuc.................CCGC.AGGGCCC.GCGGUGCGGCAGUGU.GGAG............ACCUGUCGCA.AGGCGGUUCGCUg............AGAUUGgca...................................................cAGCGA--CGCGAGGGCACGGC-.---AAAGgacc....---..gCCGCGC.UCAGGGCCGGA....CGCAAUGGCA UUCAAUGGGGUU.C.G...CCUACUCCACUCAA-.............................................UAGGCGUU.C..AACCa.....UUUAAAAAAGGAGGUUUACCUAu..................CCGC.GAGGCCC.GCGGUGCGGCAGUGU.GGAG............ACCUGUCGCA.AGGCGGUUCGCUg............AGAUUGaca...................................................cAGCGA--CGCGAGGGCACGGCAaAG--GAC........-C-..gUCGUGC.UCAGGGCCGGA....CACAAUGGCA CCCGGUGAAGUG.C.G...UCUACUCCACUAUUC.............................................UAGGCGUG.U..UUCGc.....UAAAUUUAAGGAGGAUAAAU--...................CCGU.CUGACUU.ACGGUGCGGCAGUGU.GGAG............ACCUGUCGUA.GUGCUUCCGGAA.............UUUUGCu......................................................UUCCGGCAGCGAGGACGCGCGC.----GAAaaugguag---...GCGCGU.CUAGAGUCAAG...aAAGUAUGGCA CCCGGUGAAGUG.C.G...UCUACUCCACUAUUC.............................................UAGGCGUA.U..UUCGc.....UAAAUUUAAGGAGGAUAAAU--...................CCGU.CUGACUU.ACGGUGCGGCAGUGU.GGAG............ACCUGUCGUA.GUGCUUCCGGAA.............UUUUGCu......................................................UUCCGGCAGCGAGGACGCGCGC.----GAAaaugguag---...GCGCGU.CUAGAGUCAAG...aAAGUAUGGCA CCAGGUGGGUUC.U.G...CCUACUCCACAUAA-.............................................UAGGCAGC.A..UCCGc.....UAAAUUAAAGGAGGAUAACC--...................CCGU.UGGACGC.ACGGUGCGGCAGUGU.GGAG............ACCUGUCGUA.AUGCUGCCGGG-.............AUAUGAccg....................................................-CUUGGCAGCGAGGGCACAU--.---GCGAaaugguag---...GUGUGC.CUGGCGUCAAA...gAAGUAUGGCA CCAGGUGGAUUC.U.G...CCUACUCCACAUAA-.............................................UAGACAGA.A..UACCgc....UAAAAUAAAGGAGGAUAAAC--...................CCGU.CUGACGC.ACGGUGCGGCAGUGU.GGAG............ACCUGUCGUA.AUGCU-CCCGGAa............GAUUGCu.....................................................uUCCGGUCAGCGAGAACGCACGC.----GAAaaugguag---...GUGCGU.UCGGCGUCGAA...aCAGUAUGGCA CCAGGUGGAUUC.U.G...CCUACUCCACAUAA-.............................................UAGACAGA.A..UACCgc....UAAAAUAAAGGAGGAUAAAC--...................CCGU.CUGACGC.ACGGUGCGGCAGUGU.GGAG............GCCUGUCGUA.AUGCU-CCCGGAa............GAUUGCu.....................................................uUCCGGUCAGCGAGAACGCACGC.----GAAaaugguag---...GUGCGU.UCGGCGUCGAA...aCAGUAUGGCA CCAGGUGGAUUC.U.G...CCUACUCCACAUAA-.............................................UAGACAGA.A..UGCCgc....UAAAAUAAAGGAGGAUAAAC--...................CCGU.CUGACGC.ACGGUGCGGCAGUGU.GGAG............ACCUGUCGUA.AUGCU-CCCGGAa............GAUUGCu.....................................................uUCCGGUCAGCGAGAACGCACGC.----GAAaaugguag---...GUGCGU.UCGGCGUCGAA...aCAGUAUGGCA CCAGGUGGAUUC.U.G...CCUACUCCACAUAA-.............................................UAGACAGA.A..UACCgc....UAAAAUAAAGGAGGAUAAAC--...................CCGU.CUGACGC.ACGGUGCGGCAGUGU.GGAG............ACCUGCCGUA.AUGCU-CCCGGAa............GAUUGCu.....................................................uUCCGGUCAGCGAGAACGCACGC.----GAAaaugguag---...GUGCGU.UCGGCGUCGAA...aCAGUAUGGCA CUAGGUGGAUUC.U.G...UCUACUCCACAUAA-.............................................UAGACAGA.A..UACCgc....UAAAAUAAAGGAGGAUAAAC--...................CCGU.CUGACGC.ACGGUGCGGCAGUGU.GGAG............ACCUGUCGUA.AAGCU-CCCGGAa............UAUUGCu.....................................................uUCCGGUCAGUGAGAACGCAUGC.----GAAaaugguag---...GUGCGU.UCGGCGUCGAA...aCAGUAUGGCA CCAGGUGGGUUC.U.G...UCUACUCCACAUAA-.............................................UAGACAGA.A..UACCgc....UAAAAUAAAGGAGGAUAAAC--...................CCGU.CUGACGC.ACGGUGCGGCAGUGU.GGAG............ACCUGUCGUA.AUGCU-CCCGGAa............UAUUGCu.....................................................uUCCGGUCAGUGAGAACGCAUGC.----GAAaaugguag---...GUGCGU.UCGGCGUCGAA...aCAGUAUGGCA CCAGGUGGAUUC.U.G...UCUACUCCACAUAA-.............................................UAGACAGA.A..UACCgc....UAAAAUAAAGGAGGAUAAAC--...................CCGU.CUGACGC.ACGGUGCGGCAGUGU.GGAG............ACCUGUCGUA.AUGCU-CCCGGAa............UAUUGCu.....................................................uUCCGGUCAGUGAGAACGCAUGC.----GAAaaugguag---...GUGCGU.UCGGCGUCGAA...aCAGUAUGGCA

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