Rfam: Seed sequence alignment for RF03064

URS0000D69EF9_12908/1-78 unclassified sequences 0.0 URS0000D65EC7_12908/1-77 unclassified sequences 0.0 URS0000D6C73F_12908/1-72 unclassified sequences 0.0 URS0000D68D96_12908/1-76 unclassified sequences 0.0 URS0000D68413_12908/1-76 unclassified sequences 0.0 URS0000D6BF9D_12908/1-76 unclassified sequences 0.0 URS0000D6AD88_12908/1-76 unclassified sequences 0.0 URS0000D68BBE_12908/1-76 unclassified sequences 0.0 URS0000D68E78_12908/1-74 unclassified sequences 0.0 URS0000D6C470_12908/1-76 unclassified sequences 0.0 URS0000D67518_12908/1-76 unclassified sequences 0.0 URS0000D68C26_12908/1-76 unclassified sequences 0.0 URS0000D6C91A_12908/1-76 unclassified sequences 0.0 URS0000D695D7_12908/1-76 unclassified sequences 0.0 URS0000D668FF_12908/1-76 unclassified sequences 0.0 URS0000D6C70F_12908/1-76 unclassified sequences 0.0 URS0000D69B66_12908/1-75 unclassified sequences 0.0 URS0000D6AD42_12908/1-70 unclassified sequences 0.0 URS0000D67223_12908/1-66 unclassified sequences 0.0 URS0000D68AEF_12908/1-64 unclassified sequences 0.0 URS0000D6ACD1_12908/1-66 unclassified sequences 0.0 URS0000D6A94B_12908/1-66 unclassified sequences 0.0 URS0000D68C6B_12908/1-61 unclassified sequences 0.0 URS0000D6C254_12908/1-65 unclassified sequences 0.0 URS0000D6A25D_12908/1-65 unclassified sequences 0.0 URS0000D67A96_12908/1-66 unclassified sequences 0.0 URS0000D6C46E_12908/1-66 unclassified sequences 0.0 URS0000D67A23_12908/1-67 unclassified sequences 0.0 URS0000D6884A_12908/1-66 unclassified sequences 0.0 URS0000D695C0_12908/1-65 unclassified sequences 0.0

CCUAU.UGAGUGUU.CUAUCAAA...............................UGAUAGU.AGAU.--GUaaag...........UCUUUg................cuuuAC....UUU.GAGGUCA.GACAC.GUUGA.UGUAGGAA CCUAU.UGAGUGUU.AUAUCAAA...............................UGAUAGU.AGAA.--GUaa....a........AUUAUacu................uuAC....UUU.GAGGUCA.GACAC.GUUGA.UGUAGGAA CCUAU.UGAGUGUU.AUAUCAAA...............................UGAUAGU.AGAA.--GU...............AAAGUuau..................AC....UUU.GAGGUCA.GACAC.AUUGA.UGUAGGAA CCUAU.UGAGUGUC.AUAUCAAA...............................UGAUAGU.AGAA.GUGA...............GGGUUg.............cu.....UCgc..UUU.GAGGUCA.GACAC.AGUGA.UGUAGGAA CCUAU.UGAGUGUU.AUAUCAAA...............................UGAUAGU.AGAA.GUGA...............GGUUUacu..................UCgc..UUU.GAGGUCA.GACAC.AGUGA.UGUAGGAA CCUAU.UGAGUGUU.AUAUCAAA...............................UGAUAGU.AGAA.GUGA...............GGUUUacu..................UUgc..UUU.GAGGUCA.GACAC.AGUGA.UGUAGGAA CCUAU.UGAGUGUC.AUAUCAAA...............................UGAUAGU.AGAA.GUGA...............GGCUUgcu..................UCgc..UUU.GAGGUCA.GACAC.AGUGA.UGUAGGAA CCUAU.UGAGUGUU.AUAUCAAA...............................UGAUAGU.AGAA.--GUga.............GAUUUacc................ucAC....UUU.GAGGUCA.GACAC.GGUGA.UGUAGGAA CCUAU.UGAGUGUC.AUAUCAAA...............................UGAUAGU.AGAA.--GUg..............AGUUUucu.................cAC....UUU.GAGGUCA.GACAC.GAUGA.UGUAGGAA CCUAU.UGAGUGUU.AUAUCAAA...............................UGAUAGU.AGAA.--GU.....ga........GGUUUacu...........uu.....AC....UUU.GAGGUCA.GACAC.GAUGA.UGUAGGAA CCUAU.UGAGUGUU.AUAUCAAA...............................UGAUAGU.AGAA.--GUg.....a........GGUUUacu...........u.....cAC....UUU.GAGGUCA.GACAU.GAUGA.UGUAGGAA CCUAU.UAAGUGUU.AUAUCAAA...............................UGAUAGU.AGAA.--GUg.....a........GAUUUacu...........u.....cAC....UUU.GAGGUCA.GGCAC.AGUGA.UGUAGGAA CCUAU.UGAGUGUU.AUAUCAAA...............................UGAUAGU.AGAA.--GUg.....a........GGUUUacu...........u.....cAC....UUU.GAGGUCA.GACAC.AGUGA.UGUAGGAA CCUAU.UGAGUGUU.AUAUCAAA...............................UGAUAGU.AGAA.--GUg.....a........GGUUUccu...........u.....cAC....UUU.GAGGUCA.GACAC.AGUGA.UGUAGGAA CCUAU.UGAGUGUU.AUAUCAAA...............................UGAUAGU.AGAA.--GUg.....a........AGUUUgcu................ucAC....UUU.GAGGUCA.GACAC.AGUGA.UGUAGGAA CCUAU.UGAGUGUU.AUAUCAAA...............................UGAUAGU.AGAA.--GUga.............GGUUUgcu................ucAC....UUC.GAGGUUA.GACAC.AGUGA.UGUAGGAA CCUAU.UGAGUGUU.AUAUCAAA...............................UGAUAGU.AGAU.-AUGag.............AGUAU...................cuCAu...AUU.GAGGUCA.GACAC.AAUGA.UGUAGGAA ACUGC.GGAGUAUA.AGUUUAU-...............................UGUAAGU.AGUA.UACU...............AUUU-.....................AGu...UGC.GAAAGCG.UAUAC.AAUGA.AACAGUAA CCUUU.GGAGUAUU.AUAUCAAA...............................UGUUAGU.AGUUcUA--...............CGG--.....................--....AAC.AAGGACA.GAUAC.AAUGA.AAAAGGAA CCUUU.GGAGUAUU.AUAUCAA-...............................UGUUAGU.AGUUcUA--...............CGG--.....................--....AAC.AAGGACA.GAUAC.AAUG-.AAAAGGAA CCUUU.GGACUGUU.AUAUCAAA...............................CCAUAGU.AGUU.-A--...............GCAAU.....................--....AAC.GAGGUGG.GACAG.GUUGA.AGAAGGAA CCUGU.GGAGUGUU.AAGCAAA-...............................CUGUAGU.AGCA.----...............GGAUAga...................--....CGC.GAGGCAG.AACAC.GAUGA.AGCAGGAA GCUGU.GGAGUGCC.ACACAAA-...............................CGCAAGU.AGCU.----...............AC---.....................--....GGC.GAAAGCG.GGUAC.UGAGA.AGCAGUAA GCUGU.GGAGAGCA.AAAACAAA...............................UACAAGU.AGAU.-A--...............UUUU-.....................--....ACC.AAAAGUA.UGUUC.GUUGA.AUCAGCAA GCUGU.GGAGAGCA.AAAACAAA...............................UACAAGU.AGAU.-A--...............UUUU-.....................--....AUC.AAAAGUA.UGUUC.GUUGA.AUCAGCAA GCUGU.GGAGAGCA.AAAACAAA...............................GACGAGU.AGAU.-A--...............UUUUU.....................--....AUC.AAAAGUA.UGUUC.GUUGA.AGCAGCAA GCUGU.GGAGAGCA.AAAACAAA...............................UACGAGU.AGAU.-A--...............UUUUU.....................--....AUC.AAAAGUA.UGUUC.GUUGA.AGCAGCAA GCUGU.GGAGAGCA.AAAACAAA...............................UACGAGU.AGAU.-A--...............UUUUUu....................--....AUC.AAAAGUA.UGUUC.GUUGA.AGCAGCAA GCUGU.GGAGAGCA.AAAACAAA...............................UACAAGU.AGAU.-A--...............UUUUU.....................--....AUC.AAAAGUA.UGUUC.GUUGA.AGCAGCAA GCUGU.GGAGAGCA.AAAACAAA...............................UACGAGU.AGAU.----...............AUUUU.....................--....AUC.AAAAGUA.UGUUC.GUUGA.AGCAGCAA