Rfam: Seed sequence alignment for RF03064

URS0000D6A100_12908/1-85 unclassified sequences 0.0 URS0000D65B3B_12908/1-77 unclassified sequences 0.0 URS0000D6AC5A_12908/1-77 unclassified sequences 0.0 URS0000D683AD_12908/1-83 unclassified sequences 0.0 URS0000D66479_12908/1-79 unclassified sequences 0.0 URS0000D6A689_12908/1-71 unclassified sequences 0.0 URS0000D6CE5E_12908/1-82 unclassified sequences 0.0 URS0000D6D364_12908/1-66 unclassified sequences 0.0 URS0000D6794F_12908/1-66 unclassified sequences 0.0 URS0000D6B1BD_12908/1-66 unclassified sequences 0.0 URS0000D68C52_12908/1-66 unclassified sequences 0.0 URS0000D6CCA7_12908/1-66 unclassified sequences 0.0 URS0000D67985_12908/1-85 unclassified sequences 0.0 URS0000D6C62C_12908/1-85 unclassified sequences 0.0 URS0000D66126_12908/1-66 unclassified sequences 0.0 URS0000D69736_12908/1-66 unclassified sequences 0.0 URS0000D6CD06_12908/1-85 unclassified sequences 0.0 URS0000D6A732_12908/1-85 unclassified sequences 0.0 URS0000D6CBC6_12908/1-85 unclassified sequences 0.0 URS0000D6AFB0_12908/1-85 unclassified sequences 0.0 URS0000D66D3E_12908/1-85 unclassified sequences 0.0 URS0000D6A2B0_12908/1-85 unclassified sequences 0.0 URS0000D6A2B2_12908/1-85 unclassified sequences 0.0 URS0000D6D303_12908/1-85 unclassified sequences 0.0 URS0000D6880A_12908/1-85 unclassified sequences 0.0 URS0000D69153_12908/1-85 unclassified sequences 0.0 URS0000D68164_12908/1-76 unclassified sequences 0.0 URS0000D677BD_12908/1-68 unclassified sequences 0.0 URS0000D688BE_12908/1-62 unclassified sequences 0.0 URS0000D67667_12908/1-61 unclassified sequences 0.0

AUUGU.GAAUCGUU.ACAUCAAA...............................UGAAAGU.AGUU.-AGUaaugauga.......GAAA-.............ucaaaguuAC....AAC.AAAAUCA.GACGG.GAUGA.AGCAGAAA UCUGU.GGAUCGUC.AUAUCAAA...............................UGAAAGU.AGUUgUAGAc..............AGUAAu...................gUCau..AAC.AAAAUCA.GACGG.GAUGA.AACAGAAA UCUGU.GGAUCGUC.ACAUCAAA...............................UGAGAGU.AGUUgUUGA...............UAGUAaua..................UCac..AAC.AAAAUCA.GACGG.GAUGA.AACAGAAA UCUGU.GGAUCGUU.ACAUCAAA...............................UGAGAGU.AGUU.-GGUagcagag........AGAUCaa............c...guuAC....AAC.CAAAUCA.GACGG.GAUGA.AGCAGAAA UCUGU.GAAUCGUC.AUA--AAA...............................UGAAAGU.AGUU.-AGUaaug...........CAAAGuga..............uauuGC....AAC.AAAAUCA.GACGG.GAUGA.AGCAGAAA UCUGU.GGAUCGUU.AUAUCAAA...............................UGAGAGU.AGUU.-AGU...............AAUAUu....................AC....AAC.AAAAUCA.GACGG.AAUGA.AGCAGAAA UCUGU.GGAUCGUU.ACAUCAAA...............................UGAAAGU.AGUU.-AGUaacauu.........GAGUA...............aacguuAC....AAC.AAAAUCA.GACGG.GAUGA.AGCAGAAA UCUGU.GGAUCGUC.AUAUCAAA...............................UGAGAGU.AGUU.-AU-...............UAAC-.....................--....AAC.AAAAUCA.GACGG.GAUGA.AGCAGAAA UCUGU.GGAUCGUC.AUAUUAAA...............................UGAGAGU.AGUU.-A--...............UCAA-.....................--.u..AAC.AAAAUCA.GACGG.GAUGA.AGCAGAAA UCUGU.GGAUCGUU.AUAUCAAA...............................UGAGAGU.AGUU.-A--...............GCAAC.....................--....AAC.AAAAUCA.GACGG.GAUGA.AGCAGAAA UCUGU.GGAUCGUC.AUAUCAAA...............................UGAGAGU.AGUU.-A-U...............CA---.....................AU....AAC.AAAAUCA.GACGG.GAUGA.AGCAGAAA UCUGU.GGAUCGUC.ACAUCAAA...............................UGAGAGU.AGUU.-A-U...............CA---.....................AU....AAC.AAAAUCA.GACGG.GAUGA.AGCAGAAA UCUGU.GGAUCGUU.ACAUCAAA...............................UGAGAGU.AGUU.-AGUaauaacgg.......GUAA-.............ccaauguuAU....GAC.AAAAUCA.GACGG.GAUGA.AGCAGAAA UCUGU.GGAUCGUU.AUAUCAAA...............................UGAGAGU.AGUU.-AGUagcaaug........AGCAAu.............caucguuAC....AAC.AAAAUCA.GACGG.GAUGA.AACAGAAA UCUGU.GGAUCGUC.AUAUCAAA...............................UGAGAGU.AGUU.-A--...............CUAAU.....................--....AAC.AAAAUCA.CCUGG.GAUGA.AGCAGAAA UUUGU.GGAUCGUC.ACAUCAAA...............................UGAGAGU.AGUU.-A--...............CUAAU.....................--....AAC.AAAAUCA.GACGG.GAUGA.AGCAGAAA UCUGU.GGAUCGUC.ACACCAAA...............................UGAAAGU.AGUC.-AGUaagaaug........AUUAUu.............cauuuuuGC....GAC.AAAAUCA.GACGG.GUUUA.AGCAGAAA UCUGU.GGAUCGUC.ACACCAAA...............................UGAAAGU.AGUC.-AGUaaugaug........AUUAUu.............cauucuuAC....GAC.AAAAUCA.GACGG.GUUGA.AACAGAAA UCUGU.GGAUCGUC.ACACCAAA...............................UGAAAGU.AGUC.-AGUaaugaug........AUUAUu.............cauucuuAC....GAC.AAAAUCA.GACGG.GUUGA.AGCAGAAA UCUGU.GGAUCGUC.ACAUCAAA...............................UGAAAGU.AGUC.-AGUaaugaug........AUUAUu.............cauuuuuAC....GAC.AAAAUCA.GACGG.GUUGA.AGCAGAAA UCUGU.GGAUCGUC.ACACCAAA...............................UGAAAGU.AGUC.-AGUaaugaug........AUUAUu.............cauuuuuAC....GAC.AAAAUCA.GACGG.GUUGA.AACAGAAA UCUGU.GGAUCGUC.ACACCAAA...............................UGAAAGU.AGUC.-AGUaaugaug........AUUAUu.............cauuuuuAC....GAC.AAAAUCA.GACGG.GUUGA.AGCAGAAA UCUGU.GGAUCGUC.ACACCAAA...............................UGAAAGU.AGUC.-AGUaagaaug........AUUAUu.............cauuuuuAC....GAC.AAAAUCA.GACGG.GUUGA.AGCAGAAA UCUGU.GGAUCGUC.ACACCAAA...............................UGAAAGU.AGUC.-AGUaagaau.........AAUUAuuc............auuuuuAC....GAC.CAAAUCA.GACGG.GUUGA.AACAGAAA UCUGU.GGAUCGUC.AUACCAAA...............................UGAAAGU.AGUC.-AGUaagaau.........AAUUAuuc............auuuuuAC....GAC.CAAAUCA.GACGG.GUUGA.AACAGAAA UCUGU.GGAUCGUC.AUACCAAA...............................UGAAAGU.AGUC.-AGUcagaau.........AAUUAuuc...........a.uuuuuAC....GAC.CAAAUCA.GACGG.GUUGA.AACAGAAA CCUGU.GGAUCGUU.AUAUCAAA...............................UGAAAGU.AGUU.-AGCaa.............UAUUAu.................guuGC....AAC.AAAAUCA.GACGG.AAGGA.AGCAGGAA CCUUU.GGAGCAUU.AUAUCAAA...............................CAGGAGU.AGCU.GG--...............UUUUAa....................--....AGC.GAAACUG.GAUGC.GAUGA.AUUAGGAA CCUUU.GGAGUAUU.AUAUCAAA...............................CACGAGU.AGA-.----...............UUUU-.....................--....-UC.GAAAGUG.GAUAC.UAUGA.AUAAGGAA GCUGU.GGAGUGUC.AUACAAA-...............................CCUGAGU.AGCU.U---...............C----.....................--....GGC.AAAAGGG.GACAC.GAUGA.AGCAGUGA