Rfam: Seed sequence alignment for RF03064

URS0000D6CB72_12908/1-63 unclassified sequences 0.0 URS0000D66E76_12908/1-63 unclassified sequences 0.0 URS0000D67F6F_12908/1-63 unclassified sequences 0.0 URS0000D6A320_12908/1-63 unclassified sequences 0.0 URS0000D67337_12908/1-63 unclassified sequences 0.0 URS0000D6796E_12908/1-63 unclassified sequences 0.0 URS0000D69F2E_12908/1-63 unclassified sequences 0.0 URS0000D68D53_12908/1-63 unclassified sequences 0.0 URS0000D68BC6_12908/1-66 unclassified sequences 0.0 URS0000D6AD51_12908/1-66 unclassified sequences 0.0 URS0000D6AD37_12908/1-66 unclassified sequences 0.0 URS0000D6C920_12908/1-64 unclassified sequences 0.0 URS0000D6AC19_12908/1-64 unclassified sequences 0.0 URS0000D6B5C6_12908/1-64 unclassified sequences 0.0 URS0000D6C6FF_12908/1-66 unclassified sequences 0.0 URS0000D68F8B_12908/1-63 unclassified sequences 0.0 URS0000D67D6F_212717/1-61 Clostridium tetani E88 0.0 URS0000D6917A_592027/1-61 Clostridium botulinum D str. 1873 0.0 URS0000D6A440_929506/1-61 Clostridium botulinum BKT015925 0.0 URS0000D6C36D_929506/1-61 Clostridium botulinum BKT015925 0.0 URS0000D65CC1_12908/1-61 unclassified sequences 0.0 URS0000D67A97_12908/1-63 unclassified sequences 0.0 URS0000D6766D_12908/1-62 unclassified sequences 0.0 URS0000D69F0A_12908/1-62 unclassified sequences 0.0 URS0000D6CC75_12908/1-62 unclassified sequences 0.0 URS0000D6C94F_12908/1-73 unclassified sequences 0.0 URS0000D6CFC7_12908/1-73 unclassified sequences 0.0 URS0000D6B9E9_12908/1-73 unclassified sequences 0.0 URS0000D6B552_12908/1-73 unclassified sequences 0.0 URS0000D6AB89_12908/1-73 unclassified sequences 0.0

CCUUU.GGAGAGUU.AUAUCAAA...............................CUGAAGU.AGC-.----...............GUUUA.....................--....-GC.AAAACAA.GACUC.GAUGA.ACAAGGAA CCUUU.GGAGAGUU.AUAUCAAA...............................CUGAAGU.AGC-.----...............GUUUA.....................--....-GC.AAAACAG.GACUC.GAUGA.ACAAGGAA CCUCA.GGAGAGUU.AUAUCAAA...............................CUGAAGU.AGCU.U---...............UU---.....................--....AGC.AAAACAG.GACUC.UAUGA.AUAAGGAA CCUUU.GGAGAGUU.AUAUCAAA...............................CUGGAGU.AGCU.U---...............UU---.....................--....AGC.AAAACAA.GACUC.UAUGA.AUAAGGAA CCUUG.GGAGAGUU.AUAUCAAA...............................CUGAAGU.AGCU.U---...............UU---.....................--....AGC.AAAACAG.GACUC.UGUGA.AUAAGGAA CCUUG.GGAGAGUU.AUAUCAAA...............................CUGGAGU.AGCU.U---...............UU---.....................--....AGC.AAAACAG.GACUC.UGUGA.AUAAGGAA CCUUG.GGAGAGUU.AUAUCAAA...............................CUGGAGU.AGCU.U---...............UU---.....................--....AGC.GAAACAG.GACUC.UGUGA.AUAAGGAA CCUUG.GGAGAGUU.AUAUCAAA...............................CUGAAGU.AGCC.U---...............UU---.....................--....AGC.AAAACAG.GAUUC.UGUGA.AUAAGGAA CCUUU.GGAGAGUU.AUACCAAA...............................CUAAAGU.AGCU.U---...............UUGUU.....................--....AGC.AAAAUAG.GACUC.GACGA.AUAAGGAA CCUUU.GGAGAGUU.AAACCAAA...............................CUAAAGU.AGCU.U---...............UUAUU.....................--....AGC.AAAAUAG.GACUC.AAUGA.AGAAGGAA CCUUU.GGAGAGUU.AUACCAAA...............................CUAAAGU.AGCU.U---...............UUAUU.....................--....AGC.AAAAUAG.GACUC.UGUGA.AUAAGGAA CCUUU.GGAGAGUU.AUACCAAA...............................CUAAAGU.AGCU.U---...............UUU--.....................--....AGC.AAAAUAG.GACUC.UGUGA.ACAAGGAA CCUUU.GGAGAGUU.AUACCAAA...............................CUAAAGU.AGC-.----...............GUUUUa....................--....-GC.AAAAUAG.GACUC.UGUGA.AUAAGGAA CCUUU.GGAGAGUU.AUACCAAA...............................CUAAAGU.AGC-.----...............GUUUUa....................--....-GC.AAAACAG.GACUC.UGUGA.AUAAGGAA CCUUA.GGAGAGUC.AUACCAAA...............................CUGGAGU.AGCU.UA--...............UUA--.....................--.u..AGC.AAAACAG.GACUC.UAAGA.AUAAGGAA CCUUU.GGAGAGUU.AUACCAAA...............................CAGGAGU.AGUU.U---...............UU---.....................--....AAC.GAAACUG.GACUC.UAUGA.AUUAGGAA CCCUC.GGAGUGCU.AUACAAA-...............................CCAAAGU.AGCU.----...............AU---.....................--....GGC.AAAAUGG.AGUAC.AUUGA.ACAGGGAA CCCUU.GGACUGUU.AUACAAA-...............................CCAAAGU.AGCC.U---...............C----.....................--....GGC.AAAAUGG.AACAG.GUGGA.ACAGGGAA CCCUU.GGACUGUU.AUACAAA-...............................CCAAAGU.AGCU.UA--...............-----.....................--....GGC.AAAAUGG.AACAG.GUUGA.ACAGGGAA CCCUU.GGACUGUU.AUACAAA-...............................CCAAAGU.AGCU.UA--...............-----.....................--....GGC.AAAAUGG.AACAG.GUUGA.AUAGGGAA CCUCU.GGAGUGUC.ACAUCAA-...............................CGCUAGU.AGCU.UU--...............-----.....................--....GGC.GAAAGCG.GACAC.UAUGA.AUGAGGAA CCUCU.GGAGUGUC.ACAUCAA-...............................CGCUAGUuAGCU.UU--...............-----.....................--....GGC.GAAAGCG.GACACgUAUGA.AUGAGGAA CCUCU.GGAGUGUC.ACACAAAA...............................CGCUAGU.AGCU.----...............UU---.....................--....GGC.GAAAGCG.GACAC.UAUGA.AUGAGGAA CCUCU.GGAGUGUC.ACAUCAAA...............................CGCUAGU.AGCU.----...............UU---.....................--....GGC.GAAAGCG.GACAC.UAUGA.AUGAGGAA CCUCU.GGAGUGUC.ACAUCAAA...............................CGCUAGU.AGCU.----...............UU---.....................--....GGC.GAAAGCG.GACAC.GAUGA.AUGAGGAA CCUCC.GGAGCAUU.AUAUCAAA...............................CGUAAGU.AGCU.UGUC...............CUUCGg....................GAg...GGC.AAAAACG.GAUGC.GAUGA.ACGAGGAA CCUCC.GAAGCAUU.AUAUCAAA...............................CGUAAGU.AGCU.UGUC...............CUUCGg....................GAg...GGC.AAAAACG.GAUGC.GAUGA.ACGAGGAA CCUCC.GGAGCAUU.AUAUCAAA...............................CGUGAGU.AGCU.UGUC...............CUUCGg....................GAu...GGC.AAAAACG.GAUGU.GAUGA.ACGAGGAA CCUCC.GGAGCAUU.AUAUCAAA...............................CGUGAGU.AGCU.UGUC...............CUUCGg....................GAg...GGC.AAAAACG.GAUGU.GAUGA.ACGAGGAA CCUCC.GGAGCAUU.AUAUCAAA...............................CGCAAGU.AGCU.UGUC...............CUUCUg....................GAu...GGC.AAAAACG.GAUGU.GAUGA.AUGAGGAA