Rfam: Seed sequence alignment for RF03064

URS0000D6C4E5_261594/1-67 Bacillus anthracis str. 'Ames Ancestor' 0.0 URS0000D68AF6_1053205/1-67 Bacillus cereus HuA3-9 0.0 URS0000D68AF6_718224/1-67 Bacillus cereus VD142 0.0 URS0000D6CBB0_699184/1-67 Bacillus cereus SJ1 0.0 URS0000D680EC_1053236/1-67 Bacillus cereus VD146 0.0 URS0000D6826A_1053236/1-67 Bacillus cereus VD146 0.0 URS0000D6826A_526976/1-67 Bacillus cereus BDRD-ST196 0.0 URS0000D6826A_1053248/1-67 Bacillus cereus VDM034 0.0 URS0000D6C334_526989/1-67 Bacillus cereus F65185 0.0 URS0000D6C334_1053186/1-67 Bacillus cereus BAG4X12-1 0.0 URS0000D6C334_1053229/1-67 Bacillus cereus VD107 0.0 URS0000D6C334_527019/1-67 Bacillus thuringiensis IBL 200 0.0 URS0000D6C334_1053231/1-67 Bacillus cereus VD118 0.0 URS0000D69865_637380/1-69 Bacillus cereus biovar anthracis str. CI 0.0 URS0000D69865_1053216/1-69 Bacillus cereus ISP3191 0.0 URS0000D6C674_527029/1-67 Bacillus thuringiensis serovar pondicheriensis BGSC 4BA1 0.0 URS0000D6C674_1053182/1-67 Bacillus cereus BAG3O-2 0.0 URS0000D6699B_1209364/1-67 Bacillus sp. WBUNB004 0.0 URS0000D6699B_1053225/1-67 Bacillus cereus VD045 0.0 URS0000D6699B_405532/1-67 Bacillus cereus B4264 0.0 URS0000D6699B_1053241/1-67 Bacillus cereus VD169 0.0 URS0000D67005_1053166/1-67 Bacillus cereus AND1407 0.0 URS0000D6C992_526970/1-67 Bacillus cereus BGSC 6E1 0.0 URS0000D6C992_526975/1-67 Bacillus cereus BDRD-ST26 0.0 URS0000D6C992_1053184/1-67 Bacillus cereus BAG3X2-2 0.0 URS0000D6C992_1053222/1-67 Bacillus cereus MSX-D12 0.0 URS0000D6C992_1053235/1-67 Bacillus cereus VD140 0.0 URS0000D6C992_361100/1-67 Bacillus cereus Q1 0.0 URS0000D6C992_1163722/1-67 Bacillus cereus LCT-BC244 0.0 URS0000D6C992_405533/1-67 Bacillus cereus AH1134 0.0

CCUGU.GGAGUGUU.AGAUCAAA...............................CUGUAGU.AGCG.----...............AGUGGuu...................--....GGC.AAGGCAG.GACAC.GUAGA.AGCAGGAA CCUGU.GGAGUGUU.AAAUCAAA...............................CUGUAGU.AGCA.-A--...............GUAAU.....................--u...AGC.GAAACAG.GAUAC.AUAGA.AGCAGGAA CCUGU.GGAGUGUU.AAAUCAAA...............................CUGUAGU.AGCA.-A--...............GUAAU.....................--u...AGC.GAAACAG.GAUAC.AUAGA.AGCAGGAA CCUGU.GGAGUGUC.AUAGCAAA...............................CUGUAGU.AGCG.----...............AGGUAgu...................--....GGC.GAGACAG.GACAC.GUAGA.AGCAGGAA CCUGU.GGAGUGUU.AUAGCAAA...............................CUGUAGU.AGCG.-AAU...............G----.....................AUu...GGC.GAGACAG.GACAC.AUAGA.AGCAGGAA CCUGU.GGAGUGUU.AUAGCAAA...............................CUGUAGU.AGCG.-AGU...............--G--.....................AUu...GGC.GAGACAG.GACAC.GUAGA.AGCAGGAA CCUGU.GGAGUGUU.AUAGCAAA...............................CUGUAGU.AGCG.-AGU...............--G--.....................AUu...GGC.GAGACAG.GACAC.GUAGA.AGCAGGAA CCUGU.GGAGUGUU.AUAGCAAA...............................CUGUAGU.AGCG.-AGU...............--G--.....................AUu...GGC.GAGACAG.GACAC.GUAGA.AGCAGGAA CCUGU.GGAGUGUU.ACAGCAAA...............................CUGUAGU.AGCG.-AGU...............--G--.....................AUu...GGC.GAGACAG.GACAC.GUAGA.AGCAGGAA CCUGU.GGAGUGUU.ACAGCAAA...............................CUGUAGU.AGCG.-AGU...............--G--.....................AUu...GGC.GAGACAG.GACAC.GUAGA.AGCAGGAA CCUGU.GGAGUGUU.ACAGCAAA...............................CUGUAGU.AGCG.-AGU...............--G--.....................AUu...GGC.GAGACAG.GACAC.GUAGA.AGCAGGAA CCUGU.GGAGUGUU.ACAGCAAA...............................CUGUAGU.AGCG.-AGU...............--G--.....................AUu...GGC.GAGACAG.GACAC.GUAGA.AGCAGGAA CCUGU.GGAGUGUU.ACAGCAAA...............................CUGUAGU.AGCG.-AGU...............--G--.....................AUu...GGC.GAGACAG.GACAC.GUAGA.AGCAGGAA CCUGU.GGAGUGUC.ACAGCAAA...............................CUGUAGU.AGC-.AAGA...............AUGA-.....................UUa...-GC.GAGGCAG.GGCAC.GUAGA.AGCAGGAA CCUGU.GGAGUGUC.ACAGCAAA...............................CUGUAGU.AGC-.AAGA...............AUGA-.....................UUa...-GC.GAGGCAG.GGCAC.GUAGA.AGCAGGAA CCUGU.GGAGUGUU.ACAGCAAA...............................CUGUAGU.AGC-.AA--...............GUGAUua...................--....-GC.GAGGCAG.GGCAC.GUAGA.AGCAGGAA CCUGU.GGAGUGUU.ACAGCAAA...............................CUGUAGU.AGC-.AA--...............GUGAUua...................--....-GC.GAGGCAG.GGCAC.GUAGA.AGCAGGAA CCUGU.GAAGUGUC.ACAGCAAA...............................CUGUAGU.AGC-.AA--...............GUGAUua...................--....-GC.GAGGCAG.GGCAC.GUAGA.AGCAGGAA CCUGU.GAAGUGUC.ACAGCAAA...............................CUGUAGU.AGC-.AA--...............GUGAUua...................--....-GC.GAGGCAG.GGCAC.GUAGA.AGCAGGAA CCUGU.GAAGUGUC.ACAGCAAA...............................CUGUAGU.AGC-.AA--...............GUGAUua...................--....-GC.GAGGCAG.GGCAC.GUAGA.AGCAGGAA CCUGU.GAAGUGUC.ACAGCAAA...............................CUGUAGU.AGC-.AA--...............GUGAUua...................--....-GC.GAGGCAG.GGCAC.GUAGA.AGCAGGAA CCUGU.GGAGUGUC.ACAGCAAA...............................CUGUAGU.GGC-.AA--...............GUGAUua...................--....-GC.GAGGCAG.GGCAC.GUAGA.AGCAGGAA CCUGU.GGAGUGUC.ACAGCAAA...............................CUGUAGU.AGC-.AA--...............GUGAUua...................--....-GC.GAGGCAG.GGCAC.GUAGA.AGCAGGAA CCUGU.GGAGUGUC.ACAGCAAA...............................CUGUAGU.AGC-.AA--...............GUGAUua...................--....-GC.GAGGCAG.GGCAC.GUAGA.AGCAGGAA CCUGU.GGAGUGUC.ACAGCAAA...............................CUGUAGU.AGC-.AA--...............GUGAUua...................--....-GC.GAGGCAG.GGCAC.GUAGA.AGCAGGAA CCUGU.GGAGUGUC.ACAGCAAA...............................CUGUAGU.AGC-.AA--...............GUGAUua...................--....-GC.GAGGCAG.GGCAC.GUAGA.AGCAGGAA CCUGU.GGAGUGUC.ACAGCAAA...............................CUGUAGU.AGC-.AA--...............GUGAUua...................--....-GC.GAGGCAG.GGCAC.GUAGA.AGCAGGAA CCUGU.GGAGUGUC.ACAGCAAA...............................CUGUAGU.AGC-.AA--...............GUGAUua...................--....-GC.GAGGCAG.GGCAC.GUAGA.AGCAGGAA CCUGU.GGAGUGUC.ACAGCAAA...............................CUGUAGU.AGC-.AA--...............GUGAUua...................--....-GC.GAGGCAG.GGCAC.GUAGA.AGCAGGAA CCUGU.GGAGUGUC.ACAGCAAA...............................CUGUAGU.AGC-.AA--...............GUGAUua...................--....-GC.GAGGCAG.GGCAC.GUAGA.AGCAGGAA