Rfam: Seed sequence alignment for RF03064

URS0000D6B8DB_12908/1-88 unclassified sequences 0.0 URS0000D69875_12908/1-88 unclassified sequences 0.0 URS0000D6701B_12908/1-80 unclassified sequences 0.0 URS0000D6BEDF_12908/1-80 unclassified sequences 0.0 URS0000D67E43_12908/1-80 unclassified sequences 0.0 URS0000D6C6E8_12908/1-76 unclassified sequences 0.0 URS0000D6BCC8_12908/1-76 unclassified sequences 0.0 URS0000D66466_12908/1-80 unclassified sequences 0.0 URS0000D660F8_12908/1-61 unclassified sequences 0.0 URS0000D6BC1D_12908/1-80 unclassified sequences 0.0 URS0000D66DC0_12908/1-80 unclassified sequences 0.0 URS0000D6B4CD_12908/1-83 unclassified sequences 0.0 URS0000D6809A_12908/1-83 unclassified sequences 0.0 URS0000D66683_12908/1-80 unclassified sequences 0.0 URS0000D68628_12908/1-80 unclassified sequences 0.0 URS0000D66868_12908/1-80 unclassified sequences 0.0 URS0000D6C8D2_12908/1-80 unclassified sequences 0.0 URS0000D66FE0_12908/1-80 unclassified sequences 0.0 URS0000D6A6F9_12908/1-80 unclassified sequences 0.0 URS0000D68DAB_12908/1-78 unclassified sequences 0.0 URS0000D68F44_12908/1-75 unclassified sequences 0.0 URS0000D660D5_12908/1-78 unclassified sequences 0.0 URS0000D67B3A_12908/1-79 unclassified sequences 0.0 URS0000D65D03_12908/1-80 unclassified sequences 0.0 URS0000D6729A_12908/1-80 unclassified sequences 0.0 URS0000D69681_12908/1-80 unclassified sequences 0.0 URS0000D6A11F_12908/1-80 unclassified sequences 0.0 URS0000D69095_12908/1-80 unclassified sequences 0.0 URS0000D67829_12908/1-80 unclassified sequences 0.0 URS0000D67F41_12908/1-80 unclassified sequences 0.0

CUUGU.GGACUGUU.AUAGUAAA...............................UGGAAGU.AGAU.-UUUauauuau........UUUGAgau...........auaauauAAa...AAC.AAAACCA.GACAG.GGUGA.AGCAAGAA CUUGU.GGACUGUU.AUAGCAAA...............................UGGAAGU.AGAU.-UUUauauugu........UUUGAgau...........auaauauAAa...AAC.AAAACCA.GACAG.GGUGA.AGCAAGAA CUUGU.GGACUGUU.AUAGCAAA...............................UGGGAGU.AGUC.-UUUuuuc...........UUCAA.................gaaaUGag..GAC.AAAACCA.GACAG.GUUGA.AGCAAGAA CUUGU.GGACUGUU.AUAGCGAA...............................UGGGAGU.AGUU.UUUAuuc............UUCAAa.................gaaUGaa..GAC.AAAACCA.GACAG.GGUGA.AGCAAGAA CUUGU.GGACUGUU.AUAUCAAA...............................UGGGAGU.AGUC.--UUuuuuu..........CUUC-................aaaaaAGag..GAC.AAAACCA.GACAG.GUUGA.AGCAAGAA CUUGU.GGACUGUU.AUAUCAAA...............................UGGGAGU.AGAU.UUAU...............AUAAUgau..................AUaa..AAC.CAAACCA.GACAG.GAAGA.AGCAAGAA CUUGU.GGACUGUU.AUACAAA-...............................CGAAAGU.AGU-.-AGAaa.............UAAAUuca................uuUCua..-AC.GAAAUCG.GACAG.GAUGA.AGCAAGAA CUUGU.GGACUGUU.AUAUCAAA...............................UGGGAGU.AGCC.-UUUuuucuu.........CAA--...............gagaugAG....GGC.AAAAUCA.GACAG.GUUGA.AGCAAGAA CUUGU.GGACUGUU.AUAAAAA-...............................CGAGAGU.AGCC.CA--...............-----.....................--....GGC.AAAAUCG.GACAG.GAUGA.AGCAAGAA CUUGU.GGACUGUU.AUAUCAAA...............................UGAGAGU.AGAC.UUU-acgcu..........UCGA-................agugu-Aaa..GUC.AAAAUCA.GACAG.GUUGA.AACAAGAA CUUGU.GGACUGUU.AUAGCAAA...............................UGGAAGU.AGAU.---Uuuauauc........UCAU-..............gauauaaA-....AAC.AAAACCA.GACAG.GUUGA.AGCAAGAA CUUGU.GGACUGUU.AUGACAAA...............................UGGAAGU.AGAU.---Uuuauauc........AUGAUgu............gauauaaA-....AAC.AAAACCA.GACAG.GGUGA.AGCAAGAA CUUGU.GGACUGUU.AUAACAAA...............................UGGAAGU.AGAU.---Uuuauauc........AUGAUgu............gauauaaA-....AAC.AAAACCA.GACAG.GGUGA.AGCAAGAA CUUGU.GGACUGUU.ACAUCAAA...............................UGGAAGU.AGAU.UU--.uauau.........UUCAUg..............aua...UAaa..AAC.AAAACCA.GACAG.GUUGA.AGCAAGAA CUUGU.GAACUGUU.AUAUCAAA...............................UGGAAGU.AGAU.UU--.uauau.........UUCAUg..............aua...UAaa..AAC.AAAACCA.GACAG.GUUGA.AGCAAGAA CUUGU.GGACUGUU.AUAGCAAA...............................UGGAAGU.AGAU.UU--.uauau.........UUCAUg..............aua...UAaa..AAC.AAAACCA.GACAG.GUUGA.AGCAAGAA CUUGU.GGACUGUU.AUAGCAAA...............................UGGGAGU.AGAU.UUUA...uau.........CUUAUa..............aua...UAaa..AAC.AAAACCA.GACAG.GAUGA.AGCAAGAA UUUGU.GGACUGUU.AUAACAAA...............................UGGAAGU.AGAU.UUUAua.............UUUCAuga..................UAuaaaAAC.AAAACCA.GACAG.GUUGA.AGCAAGAA CUUGU.GGACUGUU.AUAACAAA...............................UGGGAGU.AGAU.UUUAug.............UUUUAgga..................UAuaaaAAC.CAAACCA.GACAG.GAUGA.AGCAAGAA CUUGU.GGACUGUU.AUAACAAA...............................UGGGAGU.AGAU.UUUA...............UAUGAuga..................UAuaaaAAC.CAAACCA.GACAG.GAAGA.AGCAAGAA CUUGU.GGACUGUC.AUAACAAA...............................UGGGAGU.AGAU.UUUAu..............AUGAU....................aUAaa..AAC.CAAACCA.GACAG.GGAGA.AGCAAGAA CUUGU.GGACUGUU.AUAUCAAA...............................UGGAAGU.AGAU.UUUAua.............UUAAGa..................uaUAaa..AAC.CAAACCA.GACAG.GAAGA.AGCAAGAA CUUGU.GGACUGUU.AUAUCAAA...............................UGGAAGU.AGAU.UUUAua...u.........AUCAA...............g...uaUAaa..AAC.AAAACCA.GACAG.GAAGA.AACAAGAA CUUGU.GGACUGUU.AUAAUAAA...............................UGGAAGU.AGAU.UUUAuau............UUCAUg.................auaUAaa..AUC.AAAACCA.GACAG.GUUGA.AGCAAGAA CUUGU.GGACUGUU.AUAUCAAA...............................UGGGAGU.AGAU.UUUAuau............UUUAUa.................auaUAag..GAC.AAAACCA.GACAG.GGUGA.AGCAAGAA CUUGU.GGACUGUU.AUAUCAAA...............................UGGAAGU.AGAU.UUUAuauu...........UUAU-.................gauaUAag..GAC.AAAACCA.GACAG.GUUGA.AGCAAGAA CUUGU.GGACUGUU.AUAGCAAA...............................UGGGAGU.AGAU.UUUAuauc...........UCAC-..............g...guaUAag..AAC.AAAACCA.GACAG.GGUGA.AACAAGAA CUUGU.GGACUGUU.AUAGUAAA...............................UGGGAGU.AGAU.UUUAuauc...........UUAG-.................gauaUAag..AAC.AAAACCA.GACAG.GUUGA.AGCAAGAA CUUGU.GGACUGUU.AUAGCAAA...............................UGGGAGU.AGAU.UUUAuauc...........UCAG-.................gauaUAag..AAC.AAAACCA.GACAG.GUCGA.AGCAAGAA CUUGU.GGACUGUU.AUAGCAAA...............................UGGGAGU.AGAU.UUUAuauc...........UCAC-.................gguaUAag..AAC.AAAACCA.GACAG.GUUGA.AGCAAGAA