Rfam: Seed sequence alignment for RF03064

URS0000D68C87_12908/1-75 unclassified sequences 0.0 URS0000D673F2_12908/1-72 unclassified sequences 0.0 URS0000D677D6_12908/1-73 unclassified sequences 0.0 URS0000D677D6_1095771/1-73 Ruminococcus sp. JC304 0.0 URS0000D6A6AA_12908/1-73 unclassified sequences 0.0 URS0000D6A6AA_457412/1-73 Ruminococcus sp. 5_1_39BFAA 0.0 URS0000D688ED_12908/1-73 unclassified sequences 0.0 URS0000D67130_12908/1-73 unclassified sequences 0.0 URS0000D6AD06_12908/1-74 unclassified sequences 0.0 URS0000D6AD06_1262755/1-74 Blautia sp. CAG:237 0.0 URS0000D6C668_12908/1-73 unclassified sequences 0.0 URS0000D67B66_12908/1-73 unclassified sequences 0.0 URS0000D67D49_12908/1-74 unclassified sequences 0.0 URS0000D676AB_12908/1-75 unclassified sequences 0.0 URS0000D66439_476272/1-75 Blautia hydrogenotrophica DSM 10507 0.0 URS0000D66439_12908/1-75 unclassified sequences 0.0 URS0000D65D8B_12908/1-75 unclassified sequences 0.0 URS0000D65D8B_999413/1-75 [Clostridium] innocuum 2959 0.0 URS0000D65D8B_469614/1-75 Erysipelotrichaceae bacterium 6_1_45 0.0 URS0000D680DB_12908/1-75 unclassified sequences 0.0 URS0000D6809D_658657/1-75 Erysipelotrichaceae bacterium 21_3 0.0 URS0000D6809D_12908/1-75 unclassified sequences 0.0 URS0000D6570A_12908/1-104 unclassified sequences 0.0 URS0000D6C061_12908/1-104 unclassified sequences 0.0 URS0000D6D40E_12908/1-73 unclassified sequences 0.0 URS0000D6A289_12908/1-73 unclassified sequences 0.0 URS0000D6C1EF_12908/1-73 unclassified sequences 0.0 URS0000D6AAD9_12908/1-73 unclassified sequences 0.0 URS0000D66DD1_12908/1-78 unclassified sequences 0.0 URS0000D6D2F4_12908/1-80 unclassified sequences 0.0

CUUGU.GGAGAGUA.UAUAAAGA...............................UGUGAGU.AGUA.UUUA...............AGUUUacu..................UAg...UAC.AAAAACA.UACUC.AAUGA.AGCAAGAA CCUAU.GGAGAGUA.CAAGAACU...............................UGUGAGU.AGAU.UGAU...............AUUAU.....................AUc...AUC.AAAAGCA.UACUC.GUUGA.AGUAGGAA CCUAU.GGAGAGUA.CAAGAACU...............................UGUGAGU.AGAU.UGAU...............AUUUAu....................AUc...AUC.AAAAGCA.UACUC.GUUGA.AGUAGGAA CCUAU.GGAGAGUA.CAAGAACU...............................UGUGAGU.AGAU.UGAU...............AUUUAu....................AUc...AUC.AAAAGCA.UACUC.GUUGA.AGUAGGAA CCUAU.GGAGAGUA.CAGGAACU...............................UGUGAGU.AGAU.UGAU...............AUUUAu....................AUc...AUC.AAAAGCA.UACUC.GUUGA.AGUAGGAA CCUAU.GGAGAGUA.CAGGAACU...............................UGUGAGU.AGAU.UGAU...............AUUUAu....................AUc...AUC.AAAAGCA.UACUC.GUUGA.AGUAGGAA CCUAU.GGAGAGUA.CAGGAACU...............................UGUGAGU.AGAU.UGAU...............AUUUAu....................AUu...AUC.AAAAGCA.UACUC.GUUGA.AGUAGGAA ACUGU.GGAGUGUA.CACGAACU...............................UGUGUGU.AGCG.UAUA...............-GUGUaca..................A-...uCGC.CAAAGCA.NACAC.AUAGA.AGCAGUAA ACUGU.GGAGUGUA.CAGGAACU...............................UGUAAGU.AGUG.-AAUua.............UUUGAu...................aAU....CAC.AAAAGCA.UACAC.GGUGA.AGCAGUAA ACUGU.GGAGUGUA.CAGGAACU...............................UGUAAGU.AGUG.-AAUua.............UUUGAu...................aAU....CAC.AAAAGCA.UACAC.GGUGA.AGCAGUAA ACUGU.GGAGUGUA.CAAGAACC...............................UGUUAGU.AGCA.-AGUugc............CA---..................gcaAC....UGC.CAACGCA.UACAC.AAUGA.AGCAGUAA ACUGU.GGAGUGUA.CAAGAACC...............................UGUUAGU.AGCA.-AGUugc............CA---..................gcaAC....UGC.CAAAGCA.UACAC.AAUGA.AGCAGUAA ACUGU.GGAGUGUA.CACAAACC...............................UGCGAGU.AGCG.UAUU...............ACUUUgu...................AAu...CGC.CAAAGCA.UGCAC.AUUGA.AGCAGUAA ACUGU.GGAGUGUA.CAAGAACU...............................UGUGAGU.AGUA.UCUG...............UAUUUauu..................CAgg..-GC.GAAAGCA.UAUAC.AGAGA.AGCAGUAA ACUGU.GGAGUGUA.CAAGAACU...............................UGUGAGU.AGUA.UCUG...............UAUUUacu..................CAg...GGC.GAAAGCA.UAUAC.AGAGA.AGCAGUAA ACUGU.GGAGUGUA.CAAGAACU...............................UGUGAGU.AGUA.UCUG...............UAUUUacu..................CAg...GGC.GAAAGCA.UAUAC.AGAGA.AGCAGUAA ACUGU.GGAGUAUA.CAAGAACU...............................UGUGAGU.AGUA.UCUG............g..AUGUAu.......c............CAg...UAC.AAAAGCA.UAUAC.GGUGA.AGCAGUAA ACUGU.GGAGUAUA.CAAGAACU...............................UGUGAGU.AGUA.UCUG............g..AUGUAu.......c............CAg...UAC.AAAAGCA.UAUAC.GGUGA.AGCAGUAA ACUGU.GGAGUAUA.CAAGAACU...............................UGUGAGU.AGUA.UCUG............g..AUGUAu.......c............CAg...UAC.AAAAGCA.UAUAC.GGUGA.AGCAGUAA ACUGU.GGAGUAUA.CAAGAACU...............................UGUGAGU.AGUA.UCUG...............GAUUUauc..................CAg...UAC.AAAAGCA.UAUAC.GGUGA.AGCAGUAA ACUGU.GGAGUAUA.CAAGAACU...............................UGUGAGU.AGUA.UCUG...............GAUGUauc..................CAg...UAC.AAAAGCA.UAUAC.AGUGA.AGCAGUAA ACUGU.GGAGUAUA.CAAGAACU...............................UGUGAGU.AGUA.UCUG...............GAUGUauc..................CAg...UAC.AAAAGCA.UAUAC.AGUGA.AGCAGUAA ACUGU.GAAGUGUA.CAUAGUUGuuccaacauugguuguuccaacauuggaacuUGUGAGU.AGCG.UAUU...............GUUUAu....................AAu...CGC.CAAAACA.UACAC.AUCGA.AGCAGUAA ACUGU.GAAGUGUA.CAUAGUUGuuccaacauugguuguuccaacauuggaacuUGUGAGU.AGCG.UAUU...............GUUUAu....................AAu...CGC.CAAAGCA.UACAC.AUCGA.AGCAGUAA ACUGU.GGAGUGUA.CCAGAACU...............................UGUGAGU.AGUG.-AGU...............UACUUgua..................AC....CAC.AAAAGCA.UACAU.GGUGA.AGCAGUAA ACUGU.GGAGUGUA.CAAGAACU...............................UGUGAGU.AGAC.-AGAac.............UUCG-...................guUC....GUC.AAAAGCA.UACAC.GGUGA.AGCAGUAA ACUGU.GGAGUGUA.CAAGAACU...............................UGUGAGU.AGAC.-AGAac.............UUCG-...................guUC....GUC.AAAAGCA.UACAC.GAUGA.AGCAGUAA ACUGU.GGAGUGUA.CAAGAACU...............................UGUGAGU.AGAC.-AGAa..............UUUCGa...................uUC....GUC.AAAAGCA.UACAC.GAUGA.AGCAGUAA ACUGU.GGAGUAUA.CAAGAACU...............................UGUGAGU.AGUU.UAUUua.............ACUGUgu.................uaAAu...UAC.AAAAACA.UAUAU.GAUGA.AGCAGUAA ACUGU.GGAGUAUA.CGUGAACU...............................UGUGAGU.AGUA.UAUUuaau...........UUUGU.................guugAAu...UAU.GAAAGCA.UAUAC.GUUGA.AGCAGUAA