Rfam: Seed sequence alignment for RF03064

URS0000D6B110_1263031/1-73 Firmicutes bacterium CAG:56 0.0 URS0000D69A84_12908/1-67 unclassified sequences 0.0 URS0000D6C387_12908/1-73 unclassified sequences 0.0 URS0000D67BFF_12908/1-73 unclassified sequences 0.0 URS0000D65D33_12908/1-71 unclassified sequences 0.0 URS0000D6D0CA_12908/1-73 unclassified sequences 0.0 URS0000D68571_12908/1-73 unclassified sequences 0.0 URS0000D65DA7_12908/1-73 unclassified sequences 0.0 URS0000D6C884_12908/1-63 unclassified sequences 0.0 URS0000D68B33_12908/1-73 unclassified sequences 0.0 URS0000D68D38_12908/1-75 unclassified sequences 0.0 URS0000D6A56F_12908/1-75 unclassified sequences 0.0 URS0000D6C90A_12908/1-75 unclassified sequences 0.0 URS0000D665AA_12908/1-75 unclassified sequences 0.0 URS0000D677F9_12908/1-75 unclassified sequences 0.0 URS0000D692E4_12908/1-75 unclassified sequences 0.0 URS0000D67A59_1263100/1-75 Peptostreptococcus anaerobius CAG:621 0.0 URS0000D67A59_12908/1-75 unclassified sequences 0.0 URS0000D67A59_1035196/1-75 Peptostreptococcus anaerobius VPI 4330 = DSM 2949 0.0 URS0000D6B030_12908/1-75 unclassified sequences 0.0 URS0000D69F45_12908/1-75 unclassified sequences 0.0 URS0000D6B746_12908/1-75 unclassified sequences 0.0 URS0000D67244_12908/1-75 unclassified sequences 0.0 URS0000D6658A_12908/1-75 unclassified sequences 0.0 URS0000D661D2_12908/1-75 unclassified sequences 0.0 URS0000D65D5C_12908/1-75 unclassified sequences 0.0 URS0000D66819_12908/1-75 unclassified sequences 0.0 URS0000D6D3C6_12908/1-75 unclassified sequences 0.0 URS0000D670D5_12908/1-66 unclassified sequences 0.0 URS0000D69F41_12908/1-73 unclassified sequences 0.0

CCUAU.GGAGAGUA.CAAGAACU...............................UGUGAGU.AGUA.UCUG...............UUUC-ga...................CAg...UAC.AAAAGCA.UACUC.AUUGA.AGUAGGAA CCUAU.GGAGAGUA.CUAGAACU...............................UGUGAGU.AGUA.UC--...............UUUGA.....................--....UAC.AAAAGCA.UACUC.AUUGA.AGUAGGAA CCUAU.GGAGUGUA.CAAGAACU...............................UGUGAGU.AGUA.UCUG...............UUUCGg....................CAg...UAC.AAAAGCA.UACAC.GUUGA.AGUAGGAA CCUAU.GGAGAGUA.CAAGAACU...............................UGUGAGU.AGUA.UUUG...............UUUCGa....................CAg...UGC.AAAAGCA.UACUC.GUUGA.AGUAGGAA CCUAU.AGAGAGUA.CAAGAACU...............................UGUGAGU.AGUA.UCUG...............UUGA-.....................CAg...UAC.AAAAGCA.UACUC.GUUGA.AGUAGGAA CCUAU.AGAGAGUA.CAAGAACU...............................UGUGAGU.AGUA.UCUG...............UUUUGa....................CAg...UAC.AAAAGCA.UACUC.GUUGA.AGUAGGAA CCUAU.AGAGAGUA.CAAGAACU...............................UGUGAGU.AGUA.UCUG...............UUUCGa....................CAg...UAC.AAAAGCA.UACUC.GUUGA.AGUAGGAA CCUAU.AGAGAGUA.CAAGAACU...............................UGUGAGU.AGUA.UCUG...............UUUGGa....................CAg...UAC.AAAAGCA.UACUC.GUUGA.AGUAGGAA CCUAU.GGAGAGUA.CAAGAACU...............................UGUGAGU.AGCA.UA--...............G----.....................--....UGC.AAAAGCA.UACUC.GAUGA.AGUAGGAA CCUAU.GGAGAGUA.CAAGAACU...............................UGUGAGU.AGUA.UCUG...............CUU-Cggc..................AG....UGC.GAAAGCA.UACUC.GAUGA.AGUAGGAA CCUAU.GGAGAGUA.CAAGAACU...............................UGUAAGU.AGUA.GUUG...............AAUUUauu..................CAa...UAC.GAAAGCA.UACUC.GAUGA.AGUAGGAA CCUAU.GGAGAGUA.CAAGAACU...............................UGUAAGU.AGUA.GUUG...............AAUUUauu..................CAa...UAC.GAAAGCA.UACUC.UAAGA.AGUAGGAA CCUAU.GGAGAGUA.CAAGAACU...............................UGUAAUU.AGUA.UUUG...............AAUUUauu..................CAg...UAU.GAAAGCA.UACUC.GAUGA.AGUAGGAA CCUAC.GGAGAGUA.CAAGAACU...............................UGUAAUU.AGUA.UUUG...............AAUUUauu..................CAg...UAU.GAAAGCA.UACUC.GAUGA.AGUAGGAA CCUAU.GGAGAGUA.CAAGAACU...............................UGUGAAU.AGUA.UCUG...............AAUUUauu..................CAg...UAU.GAAAGCA.UACUC.GAUGA.AGUAGGAA CCUAU.GGAGAGUA.CAAGAACU...............................UGUGAGU.AGUA.UUUG...............GAUUUauu..................CAg...UAU.GAAAGCA.UACUC.GAUGA.AGUAGGAA UCUAU.GGAGAGUA.CAAGAACU...............................UGUGAGU.AGUA.UCUG...............GAUUUguu..................CAg...UAU.GAAAGCA.UGCUC.GAUGA.AGUAGGAA UCUAU.GGAGAGUA.CAAGAACU...............................UGUGAGU.AGUA.UCUG...............GAUUUguu..................CAg...UAU.GAAAGCA.UGCUC.GAUGA.AGUAGGAA UCUAU.GGAGAGUA.CAAGAACU...............................UGUGAGU.AGUA.UCUG...............GAUUUguu..................CAg...UAU.GAAAGCA.UGCUC.GAUGA.AGUAGGAA CCUAU.GGAGAGUA.CAAGAACU...............................UGUGAGU.AGUG.UCUG...............GAUUAauu..................CAg...UAU.GAAAGCA.UACUC.AAUGA.AAUAGGAA CCUAU.GGAGAGUA.CAAGAACU...............................UGUGAGU.AGUA.UCUG...............AACUAauu..................CAg...UAU.GAAAACA.UACUC.AAUGA.AAUAGGAA CCUAU.GGAGAGUA.CAAGAACU...............................UGUGAGU.AGUA.UUUG...............CAGAAuuu..................CGa...UAU.GAAAGCA.UACUC.GAUGA.AAUAGGAA CCUAG.GGAGAGUA.CAAGAACU...............................UGUGAGU.AGUA.UUUG...............AAGAAuuu..................CAu...UAU.GAAAGCA.UACUC.GAUGA.CAUAGGAA CCUAU.GGAGAGUA.CAAGAACU...............................UGUGAGU.AGUA.UAUG...............AAGAAuuu..................CAa...UAU.GAAAGCA.UACUC.GACGA.AGUAGGAA CCUAU.GGAGAGUA.CAAAAACU...............................UGUGAGU.AGUA.UCUG...............AAGAAuuu..................CAg...UAC.GAAAGCA.UACUC.GAUGA.AGUAGGAA CCCAU.GGAGAGUA.CAAGAACU...............................UGUGAGU.AGUA.UUUG...............AAGAAuuu..................CAg...UAU.GAAAGCA.UACUC.GAUGA.AGUAGGAA CCUAU.GGAGAGCA.CAAGAACU...............................UGUGAGU.AGUA.UUUG...............AAGAAuuu..................CAg...UAC.GAAAACA.UGCUC.GAUGA.AGUAGGAA CCUAU.GGAGAGUA.CAAGAACU...............................UGUAAGU.AGUG.UCUGa..............AAAAU...................uuCAg...GAC.GAAAGCA.UACUC.GAAGA.CGUAGGAA UCUAU.GGAGAGUA.CAAGAACU...............................UGUGAGU.AGUA.--CC...............UU---.....................GG....UAC.GAAAGCA.UACUC.GAUGA.AAUAGGAA CCUAU.GGAGUGUA.CUAGAACU...............................UGUGAGU.AGCA.-AAU...............UACUUgua..................AU....UGC.AAAAGCA.UACAC.GAAGA.AGUAGGAA