Rfam: Seed sequence alignment for RF03064

URS0000D6A38A_12908/1-73 unclassified sequences 0.0 URS0000D6C46B_12908/1-73 unclassified sequences 0.0 URS0000D65FDC_1073376/1-73 Ruminococcus lactaris CC59_002D 0.0 URS0000D6B1B7_657313/1-73 Ruminococcus torques L2-14 0.0 URS0000D6D1B4_12908/1-73 unclassified sequences 0.0 URS0000D68F9A_742765/1-73 Dorea formicigenerans 4_6_53AFAA 0.0 URS0000D6B0F9_657313/1-73 Ruminococcus torques L2-14 0.0 URS0000D6B0F9_411461/1-73 Dorea formicigenerans ATCC 27755 0.0 URS0000D6B0F9_12908/1-73 unclassified sequences 0.0 URS0000D6B0F9_1226324/1-73 Blautia sp. KLE 1732 0.0 URS0000D6B0F9_742765/1-73 Dorea formicigenerans 4_6_53AFAA 0.0 URS0000D6B0F9_470146/1-73 Coprococcus comes ATCC 27758 0.0 URS0000D6B0F9_657323/1-73 Ruminococcus sp. SR1/5 0.0 URS0000D681FD_411461/1-73 Dorea formicigenerans ATCC 27755 0.0 URS0000D681FD_742765/1-73 Dorea formicigenerans 4_6_53AFAA 0.0 URS0000D673B1_12908/1-73 unclassified sequences 0.0 URS0000D66BBB_12908/1-73 unclassified sequences 0.0 URS0000D6B76D_12908/1-73 unclassified sequences 0.0 URS0000D6720B_12908/1-73 unclassified sequences 0.0 URS0000D67C78_12908/1-73 unclassified sequences 0.0 URS0000D69723_12908/1-73 unclassified sequences 0.0 URS0000D65A20_12908/1-73 unclassified sequences 0.0 URS0000D6BD8A_12908/1-73 unclassified sequences 0.0 URS0000D6B366_12908/1-73 unclassified sequences 0.0 URS0000D65F52_12908/1-73 unclassified sequences 0.0 URS0000D6CEA4_12908/1-75 unclassified sequences 0.0 URS0000D6AFBE_12908/1-76 unclassified sequences 0.0 URS0000D69864_12908/1-75 unclassified sequences 0.0 URS0000D679A8_12908/1-75 unclassified sequences 0.0 URS0000D6CEA8_12908/1-75 unclassified sequences 0.0

CCUAU.GGAGAGUA.CAAGAUCU...............................UGUGAGU.AGAU.-AGA...............UAUUUaua..................UC....AUC.AAAAGCA.UACUC.GUUGA.AGUAGGAA CCUAU.GGAGAGUA.CAAGAACU...............................UGUGAGU.AGAU.-AGA...............UAUUUaua..................UC....AUC.AAAAGCA.UACUC.UUUGA.AGUAGGAA CCUAU.GGAGAGUA.CAAGAACU...............................UGUGAGU.AGAU.-AGA...............UAUUUaua..................UC....AUC.AAAAGAA.UACUC.GUUGA.AGUAGGAA CCUAU.GGAGAGUA.CAAGAACU...............................UGUGAGU.AGAU.-AGA...............UAUUUaua..................UC....AUC.AAAAGCA.UACUC.GUUGA.AAUAGGAA CCUAU.GGAGAGUA.CAAGUACU...............................UGUGAGU.AGAU.-AGA...............UAUUUaua..................UC....AUC.AAAAGCA.UACUC.GUUGA.AGUAGGAA CCUAU.GGAGAGUA.CAAGAACU...............................UGUGAGU.AGAU.-AGA...............UAUUUaua..................UC....AUC.AAAAACA.UACUC.GUUGA.AGUAGGAA CCUAU.GGAGAGUA.CAAGAACU...............................UGUGAGU.AGAU.-AGA...............UAUUUaua..................UC....AUC.AAAAGCA.UACUC.GUUGA.AGUAGGAA CCUAU.GGAGAGUA.CAAGAACU...............................UGUGAGU.AGAU.-AGA...............UAUUUaua..................UC....AUC.AAAAGCA.UACUC.GUUGA.AGUAGGAA CCUAU.GGAGAGUA.CAAGAACU...............................UGUGAGU.AGAU.-AGA...............UAUUUaua..................UC....AUC.AAAAGCA.UACUC.GUUGA.AGUAGGAA CCUAU.GGAGAGUA.CAAGAACU...............................UGUGAGU.AGAU.-AGA...............UAUUUaua..................UC....AUC.AAAAGCA.UACUC.GUUGA.AGUAGGAA CCUAU.GGAGAGUA.CAAGAACU...............................UGUGAGU.AGAU.-AGA...............UAUUUaua..................UC....AUC.AAAAGCA.UACUC.GUUGA.AGUAGGAA CCUAU.GGAGAGUA.CAAGAACU...............................UGUGAGU.AGAU.-AGA...............UAUUUaua..................UC....AUC.AAAAGCA.UACUC.GUUGA.AGUAGGAA CCUAU.GGAGAGUA.CAAGAACU...............................UGUGAGU.AGAU.-AGA...............UAUUUaua..................UC....AUC.AAAAGCA.UACUC.GUUGA.AGUAGGAA CCUAU.GGAGAGUA.CAAGAACU...............................UGUGAGU.AGAU.-AGA...............UAUUUaua..................UC....AUC.AAAAGCA.UACUC.GUUGA.AGUGGGAA CCUAU.GGAGAGUA.CAAGAACU...............................UGUGAGU.AGAU.-AGA...............UAUUUaua..................UC....AUC.AAAAGCA.UACUC.GUUGA.AGUGGGAA CCUAU.GGAGAGUA.CAAGAACU...............................UGUGAGU.AGAU.-AGA...............UAUUCaua..................UC....AUC.AAAAGCA.UACUC.GUUGA.AGUAGGAA CCUAU.GGAGAGUA.CAAGAACU...............................UGUGAGU.AGAU.-AGA...............UAUUUaua..................UC....AUC.AAAAGCA.UGCUU.GUUGA.AGUAGGAA CCUAU.GGAGAGUA.CAAGAACU...............................UGUGAGU.AGAU.-GGA...............UAUUUgua..................UC....AUC.AAAAGCA.UACUC.GUUGA.AGUAGGAA CCUAU.GGAGAGUA.CAAGAACU...............................UGUGAGU.AGAU.-GGA...............UAUUUaua..................UC....AUC.AAAAGCA.UAUUC.GUUGA.AGUAGGAA ACUGU.GAAGUAUA.CAAGAACU...............................UGUGAGU.AGAU.-UGA...............UAUUUaua..................UC....AUC.CAAAGCA.UAUAC.GUUGA.AGCAGUAA ACUGU.GGAGUGUA.CAAGAACU...............................UGUGAGU.AGAU.-UGA...............UAUUUaua..................UC....AUC.AAAAGCA.UAUAC.GUUGA.AGCAGUAA CCUAU.GGAGAGUA.CAAGAACU...............................UGUGAGU.AGAU.-UGA...............UAUUUaua..................UC....AUC.CAAAGCA.UAUAC.GUUGA.AGCAGUAA CCUAU.AGAGAGUA.CAAGAACU...............................UGUAAGU.AGUG.-AUUga.............CUUG-...................ucAA....CAC.AAAAGCA.UACUC.GUUGA.AGUAGGAA CCUAU.GGAGAGCA.CAAGAACU...............................UGUGAGU.AGUG.-AUUga.............CUUG-...................ucAA....CAC.AAAAGCA.UACUC.GUUGA.AGUAGGAA CCUAU.GGAGAGUA.CAAGAACU...............................UGUAAGU.AGUG.-AUU...............GACUUguc..................AA....CAC.GAAAGCA.UACUC.GUUGA.AAUAGGAA CCUAU.GAAGAGUA.CAAAAAAA...............................UGUGAGU.AGUG.GUUG...............AAUUUauu..................UGa...CAC.AAAAACA.UACUC.AACGA.AGUAGGAA CUUGU.GGAGAGUA.UACAACGA...............................UGUGAGU.AGUA.UUUA...............AGUAAacu..................UAaa..UAC.GAAAGCA.UACUC.GAUGA.AACAAGAA CUUGU.GGAGAGUA.UACAAAGA...............................UGUAAUU.AGUA.UUUAg..............AGUUAu...................cUAa...UAC.GAAAGCA.UGCUC.GAUGA.AACAAGAA CUUGU.GGAGAGUA.CAAUAAAC...............................UGUGAAU.AGUA.UUUA...............AGUUUacu..................UAa...UAU.GAAAGCA.UACUC.GAUGA.AUCAAGAA CUUGU.GGAGAGUA.AAAGAAAA...............................UGUAAGU.AGUA.UUUAg..............AGUUAu...................cUAa...UAC.GAAAGCA.UACUC.AAUGA.AACAAGAA