Rfam: Seed sequence alignment for RF03064

URS0000D6AA33_12908/1-73 unclassified sequences 0.0 URS0000D6C0FB_12908/1-73 unclassified sequences 0.0 URS0000D6986D_12908/1-73 unclassified sequences 0.0 URS0000D6A2AE_657313/1-73 Ruminococcus torques L2-14 0.0 URS0000D6A2AE_12908/1-73 unclassified sequences 0.0 URS0000D67766_12908/1-73 unclassified sequences 0.0 URS0000D66CBD_12908/1-73 unclassified sequences 0.0 URS0000D684FD_1226324/1-73 Blautia sp. KLE 1732 0.0 URS0000D66780_12908/1-73 unclassified sequences 0.0 URS0000D66146_12908/1-69 unclassified sequences 0.0 URS0000D6A355_12908/1-73 unclassified sequences 0.0 URS0000D6CC4E_12908/1-73 unclassified sequences 0.0 URS0000D6B482_12908/1-73 unclassified sequences 0.0 URS0000D6A8D4_12908/1-73 unclassified sequences 0.0 URS0000D6D16E_658656/1-73 Lachnospiraceae bacterium 6_1_37FAA 0.0 URS0000D6D16E_12908/1-73 unclassified sequences 0.0 URS0000D6BDA8_12908/1-73 unclassified sequences 0.0 URS0000D68305_12908/1-73 unclassified sequences 0.0 URS0000D667F7_1262967/1-73 Ruminococcus sp. CAG:9 0.0 URS0000D667F7_457412/1-73 Ruminococcus sp. 5_1_39BFAA 0.0 URS0000D667F7_12908/1-73 unclassified sequences 0.0 URS0000D6C6C0_12908/1-73 unclassified sequences 0.0 URS0000D6A040_12908/1-72 unclassified sequences 0.0 URS0000D6D2F7_12908/1-73 unclassified sequences 0.0 URS0000D695AC_12908/1-73 unclassified sequences 0.0 URS0000D6B513_12908/1-72 unclassified sequences 0.0 URS0000D66AF9_12908/1-73 unclassified sequences 0.0 URS0000D67979_12908/1-73 unclassified sequences 0.0 URS0000D6B758_12908/1-73 unclassified sequences 0.0 URS0000D6ABCE_12908/1-73 unclassified sequences 0.0

ACUAU.GGAGUGUA.CUAGAACU...............................UGUGAGU.AGAU.-AUG...............AUUUCgg..................uCA....AUC.CAAAGCA.UGCAC.GGUGA.CAUAGUAA ACUAU.GGAGUGCA.CUAGAACU...............................UGUGAGU.AGAU.-AUG...............AUUUCgg..................uCA....AUC.CAAAGCA.UGCAC.GGUGA.CAUAGUAA ACUAU.GGAGUGUA.CAUGAACU...............................UGUGAGU.AGAU.-AUG...............AUUUCgg..................uCA....AUC.CAAAGCA.UGCAC.GGUGA.CAUAGUAA ACUGU.GGAGUGUA.CAAGAACU...............................UGUGAGU.AGAU.-AUG...............AUUUCgg..................uUA....AUC.CAAAGCA.UACAC.GAUAA.AGCAGUAA ACUGU.GGAGUGUA.CAAGAACU...............................UGUGAGU.AGAU.-AUG...............AUUUCgg..................uUA....AUC.CAAAGCA.UACAC.GAUAA.AGCAGUAA ACUGC.GGAGUGUA.CAAGAACU...............................UGUGAGU.AGAU.-AUGa..............UCUCGg...................uCA....AUC.AAAAACA.UACAC.GGUGA.AGCAGUAA ACUGC.GGAGUGUA.CAAGAACU...............................UGUGAGU.AGAU.-AUG...............AUUUCgg..................uCA....AUC.AAAAACA.UACAC.GGUGA.AGCAGUAA ACUGU.GGAGUGUA.CAAGAACU...............................UGUGAGU.AGAU.-AUG...............AUUUCggu..................CA....AUC.AAAAACA.UACAC.GGUGA.AGCAGUAA ACUGU.GGAGUGUA.CAGGAACC...............................UGUGAGU.AGAU.-AUG...............GCUUUagu..................CA....AUC.AAAAGCA.UACAC.GAAGA.AGCAGUAA UCUAU.GAAGAGUA.CAAGAAUU...............................UGUGAGU.AAUA.--U-...............UUAUU.....................UGa...UAC.GAAAUCA.UACUC.GAUGA.AGUAGGAA CCUAU.GGAGUGUA.UAAGAACU...............................UGUGAGU.AGUA.UAUC...............AGAAAu....................GAu...UAC.AAAAGCA.UACAC.GAUGA.AAUAGGAA CCUAU.GGAGUGUA.CAAGAACU...............................UGCGAGU.AGAU.UAUG...............AGAAAu....................CAu...GUC.AAAAGCA.UACAC.GAUGA.AAUAGGAA CCUAU.GGAGUGUA.CAAGAACU...............................UGCGAGU.AGAU.UAUG...............AGAAAu....................CAu...GUC.AAAAGCA.UAUAC.GAUGA.AGUAGGAA CCUAU.GGAGUGUA.CAAGAACU...............................UGCGAGU.AGAU.UAUG...............AUAAAu....................CAu...GUC.AAAAGCA.UAUAC.GAUGA.AGUAGGAA CCUAU.GGAGAGUA.CAAGAACU...............................UGUAAGU.AGUG.AUUG...............ACUUAc....................CAa...CAC.GAAAGCA.UACUC.GUUGA.AAUAGGAA CCUAU.GGAGAGUA.CAAGAACU...............................UGUAAGU.AGUG.AUUG...............ACUUAc....................CAa...CAC.GAAAGCA.UACUC.GUUGA.AAUAGGAA CCUAU.GGAGAGUA.CAGGAACU...............................UGUGAGU.AGAUaGAUA...............--UUUau...................AUu...AUC.AAAAGCA.UACUC.GUUGA.AGUAGGAA CCUAU.GGAGAGUA.CAAAAAAC...............................UGUGAGU.AGAU.-GGA...............UAUUUaua..................UC....AUC.AAAAGCA.UAUUC.GUGGA.AGUAGGAA CCCCU.GGAGAGUA.CAAAAACC...............................UGUGAGU.AGAU.-GGA...............UAUUUaua..................UC....AUC.AAAAGCA.UAUUC.GUUGA.AGUAGGAA CCCCU.GGAGAGUA.CAAAAACC...............................UGUGAGU.AGAU.-GGA...............UAUUUaua..................UC....AUC.AAAAGCA.UAUUC.GUUGA.AGUAGGAA CCCCU.GGAGAGUA.CAAAAACC...............................UGUGAGU.AGAU.-GGA...............UAUUUaua..................UC....AUC.AAAAGCA.UAUUC.GUUGA.AGUAGGAA CCCCU.GGAGAGUA.CAAAAACC...............................UGUGAGU.AGAU.-GGA...............UAUUUaua..................UC....AUC.AAAAGCA.UAUUC.GUUGA.GGUAGGAA CCUAU.GGAGAGUA.CAAAACU-...............................UGUGAGU.AGAU.-AGA...............UAUUUaua..................UC....AUC.AAAAGCA.UACUC.GUUGA.AGUAGGAA CCUAU.GGAGAGUA.CAAGAACU...............................UGUGAGU.AGAU.-AGG...............UAUUUaug..................CC....AUC.AAAAGCA.UACUC.GUUGA.AGUAGGAA CCUAU.GGAGAGUA.CAAGAACU...............................UGUGAGU.AGAU.-UGA...............UAUUUaua..................UC....AUC.AAAAGCA.UGCUC.GUUGA.AAUAGGAA CCUAU.GGAGAGUA.CAAGAACC...............................U-UGAGU.AGAU.-UGA...............UAUUUaua..................UC....AUC.AAAAGCA.UACUC.GUUGA.AGUAGGAA CCUAU.GGAGAGUA.CAAGAACC...............................UGUGAGU.AGAU.-UGA...............UAUUUaua..................UC....AUC.AAAAGCA.UACUC.GUUGA.AGUAGGAA CCUAU.GGAGAGUA.CAAGAGCU...............................UGUGAGU.AGAU.-UGA...............UAUUUaua..................UC....AUC.AAAAGCA.UACUC.GUUGA.AGUAGGAA CCUAU.GGAGAGUA.CAGGAACU...............................UGUGAGU.AGAU.-AGA...............UAUUUaua..................UC....AUC.AAAAGCA.UACUC.GUUGA.AGUAGGAA CCUAU.GGAGAGUA.CAAGAACU...............................UGUGAGU.AGAU.-AGA...............UAUUUaua..................UC....GUC.AAAAGCA.UACUC.GUUGA.AGUAGGAA