# STOCKHOLM 1.0
#=GF ID Plastid-rpl16
#=GF AC RF04334
#=GF DE Plastid-rpl16 group II-D1 intron
#=GF AU Hua J; 0000-0003-0669-5192
#=GF GA 43.0
#=GF NC 42.9
#=GF TC 43.0
#=GF SE Mehta D
#=GF SS Predicted; LocARNA;
#=GF TP Intron;
#=GF BM cmbuild -F CM SEED
#=GF CB cmcalibrate --mpi CM
#=GF SM cmsearch --cpu 4 --verbose --nohmmonly -T 30.00 -Z 2958934 CM SEQDB
#=GF DR SO; 0000603; group_II_intron;
#=GF DR GO; 0000373; Group II intron splicing;
#=GF RN [1]
#=GF RM 36575799
#=GF RT Retrograde signaling in plants: A critical review focusing on the GUN
#=GF RT pathway and  beyond.
#=GF RA Richter AS, Nagele T, Grimm B, Kaufmann K, Schroda M, Leister D, Kleine T
#=GF RL Plant Commun. 2023;4:100511.
#=GF CC Plastid-rpl16 is a non-coding RNA (ncRNA) recognised in plastids. It was
#=GF CC recognised in and intronic region of a ribosome rpl16 gene.
#=GF WK Chloroplast_DNA
#=GF SQ 538

NC_000932.1/82236-82189   AAGAGCCUU---GAG----CCA-AU-AAAA-A---CUA----AGAAA-A-UUG-ACUCAAA-AACAAAU
NC_030350.1/82157-82111   AAGAGCCUU---GAG----CCA-AU-AAAA-A---CUA----AGAAA-A-UUG-ACUCAAA-AACAAA-
NC_029378.1/81903-81856   AAGAGCCUU---GAG----CCA-AU-AAAA-A---CUG----AGAAA-A-UUG-ACUCAAA-AACAAAU
NC_009272.1/80533-80486   AAGAGCCUU---GAG----CCA-AU-AAAA-A---CUA----AGAAC-A-UUG-ACUCAAA-AACAAAU
NC_037760.1/80728-80682   AAGAGCCUU---GAG----CCA-AU-AAAA-A---CUG----AGAAA-A-UUG-ACUCAAA-AACGAA-
NC_009270.1/81807-81761   AAGAGCCUU---GAG----CCA-AU-AAAA-A---CUG----AGAAA-A-UUG-ACUCAAA-AACACA-
NC_045117.1/83763-83716   AAGAGCCUU---GAG----CCA-AU-AAAG-A---CUA----AGAAA-A-UUG-ACUCAAG-AACAAAU
NC_034357.1/81048-81002   AAGAGCCUU---GAG----CCA-AU-AAAA-A---CUG----AGAAA-A-UUG-ACUCAAA-AAUAAA-
NC_034331.1/81532-81485   AAGAGCCUU---GAG----CCA-AU-AAAG-A---CUG----AGAAA-A-UUG-ACUCAAA-AACAAAU
NC_028727.1/82151-82104   AAGAGCCCU---GAG----CCA-AU-AAAA-A---CUG----AGAAA-A-UUG-ACUCAAA-AACAAAU
NC_036962.1/82324-82277   AAGAGCCUU---GAG----CCA-AU-CAAA-A---CUG----AGAAA-A-UUG-ACUCAAA-AACAAAU
NC_039952.1/81568-81522   AAGAGCCUU---GAG----CCA-AU-AAAA-A---CUG----AGAAA-A-UUG-ACUCAAA-AAGAAA-
NC_033499.1/81148-81102   AAGAGCCUU---GAG----CCA-AU-AAAA-A---CUG----AGAAA-A-UUG-ACUCAAA-AAAAAA-
NC_028728.1/82016-81971   --GAGCCCU---GAG----CCA-AU-AAAA-A---CUG----AGAAA-A-UUG-ACUCAAA-AACAAAU
NC_036110.1/81585-81540   AAGAGCCUU---GAG----CCA-AU-AAAA-A---CUG----AGAAA-A-UUG-ACUCAAA-AAAAA--
NC_039955.1/81848-81803   -GGAGCCUU---GAG----CCA-AU-AAAA-A---CUG----AGAAA-A-UUG-ACUCAAA-AAGAAA-
NC_030609.1/80263-80217   AAGAGCCUU---GAG----CCA-AU-AAAG-A---CUG----AGAAA-A-UUG-ACUCAAA-AAUAAA-
NC_034359.1/80940-80894   AAGAGCCUU---GAG----CCA-AU-AAAA-A---CUG----AGAAA-A-UUG-ACUCUAA-AAUAAA-
NC_034371.1/82456-82409   AAGAGCUUU---GAG----CCA-AU-AAAG-A---CUG----AGAAA-A-UUG-ACUCAAA-AACAAAU
NC_037753.1/85067-85020   AAGAGCCUU---GAG----CCA-AU-AAAA-A---CUG----AGAAG-A-UUG-ACUCAAG-AACAAAU
NC_045098.1/84229-84182   AAGAGCCCU---GAG----CCA-AU-AAAG-A---CUA----AGAAA-A-UUG-ACUCAAG-AACAAAU
NC_035706.1/85228-85181   AAGAGCCUC---GAG----CCA-AU-AAAG-A---CUA----AGAAA-A-UUG-ACUCAAG-AACAAAU
NC_044804.1/83210-83163   AAGAGCCUC---GAG----CCA-AU-AAAG-A---CUG----AGAAA-A-UUG-ACUCAAA-AACAAAU
NC_030775.1/81860-81814   AAGAGCCUU---GAG----CCA-AU-AAAA-A---CUG----AGAAA-A-UUG-ACUCAAA-AAAAAA-
NC_009265.1/81512-81467   AAGAGCCUU---GAG----CCA-AU-AAAA-A---CUG----AGAAA-A-UUG-ACUCAAA-AAAAA--
NC_034360.1/81769-81722   AAGAGCCUU---GAG----CCA-AU-AAAA-G---CUG----AGAAA-A-UUG-CCUCAAA-AACAAAU
NC_036963.1/81257-81213   AAGAGCCUU---GAG----CCA-AU-AAAA-A---CUG----AGAAA-A-UUG-ACUCAAA-AAAA---
NC_009269.1/81476-81430   AAGAGCCUU---GAG----CCA-AU-CAAA-A---CUG----AGAAA-A-UUG-ACUCAAA-AAAAAA-
NC_034364.1/85518-85474   ---AGCCUU---GAG----CCA-AU-AAAA-A---CUG----AGAAG-A-UUG-ACUCAAA-AACAAAU
NC_034640.1/78780-78734   AAGAGCCUU---GAG----CCA-AU-AAAG-A---CUG----AGAAA-A-UUG-ACUCAAG-AAUAAA-
NC_044475.1/86116-86070   AAGAGCCUC---GAG----CCA-AU-AAAG-A---CUA----AGAAA-A-UUG-ACUCAAG-AAUAAA-
NC_034358.1/81617-81571   AAGAGCCUU---GAG----CCA-AU-AA-A-A---CUG----AGAAA-A-UUG-ACUCAAA-AACAAAU
NC_045113.1/85076-85029   AAGAGCUCU---GAG----CCA-AU-AAAG-A---CUA----AGAAA-A-UUG-ACUCAAG-AACAAAU
NC_041440.1/92003-91956   AAGAGCUUC---GAG----CCA-AU-AAAG-A---CUA----AGAAA-A-UUG-ACUCAAG-AACAAAU
NC_029420.1/86547-86500   AAGAGCCUC---GAG----CCA-AU-AAAG-A---CUA----AGAAA-A-UUG-ACUUAAG-AACAAAU
NC_045112.1/84676-84629   AAGAGCCCU---GAG----CCA-AU-AAAG-A---UUA----AGAAA-A-UUG-ACUCAAG-AACAAAU
NC_034698.1/84201-84154   AAGAGCUUC---GAG----CCA-AU-AAAG-A---CUG----AGAAA-A-UUG-ACUCAAA-AACAAAU
NC_037885.1/86187-86140   AAGAGCCUC---GAG----UCA-AU-AAAG-A---CUG----AGAAA-A-UUG-ACUCAAA-AACAAAU
NC_026197.1/83276-83229   AAGAGCCCU---GAG----CCA-AU-AAAG-A---CUG----AGAAA-A-UUG-ACUCAAG-AACAAAU
NC_026691.1/84239-84192   AAGAGCCUC---GAG----CCA-AU-AAAG-A---CUA----AGAAG-A-UUG-ACUCAAG-AACAAAU
NC_035662.1/84634-84587   AAGAGCCUC---GAG----CCA-AU-AAAG-A---CUG----AGAAA-A-UUG-ACUCAAG-AACAAAU
NC_040951.1/84298-84251   AAGAGCCUC---GAG----CCA-AU-AAAG-A---CUA----AGAAA-G-UUG-GCUCAAA-AACAAAU
NC_035650.1/85540-85493   AAGAGCCUC---GAG----CCA-AU-AAAG-A---CUG----AGAAG-A-UUG-ACUCAAA-AACAAAU
NC_045108.1/70599-70552   AAGAGCUUC---GAG----CCA-AU-AAAG-A---CUA----AGAAU-A-UUG-ACUCAAA-AACAAAU
NC_035542.1/85281-85234   AAGAGCCUU---GAG----CCA-AU-AAAG-A---CUG----AGAAG-A-UUG-ACUCAAG-AACAAAU
NC_037884.1/86790-86743   AAGAGCCUC---GAG----CCA-AU-AAAG-A---CUA----AGAAU-A-UUG-ACUCAAG-AACAAAU
NC_040849.1/81347-81301   AAGAGCCUU---GAG----CCA-AU-AAAA-A---CUG----AGAAA-A-UUG-CCUCAAA-AAAAAA-
NC_037425.1/82220-82174   AAGAGCCUC---GAG----CCA-AU-AAAG-A---CUA----AGAAC-A-UUG-ACUCAAA-AAUAAA-
NC_044767.1/86301-86254   AAGAGCCUC---GAG----CCA-AU-AAAG-A---CUG----AGAAA-A-UUG-ACUCAAC-AACAAAU
NC_034915.1/84621-84574   AAGAGCCUC---GAG----CCA-AU-AAAG-A---CUA----AGAAC-A-UUG-ACUCAAG-AACAAAU
NC_040953.1/83117-83070   AAGAGCCUC---GGG----CCA-AU-AAAG-A---CUA----AGAAC-A-UUG-ACUCAAA-AACAAAU
NC_030571.1/87061-87014   AAGAGCCUG---GAG----CCA-AU-AAAG-A---CUG----AGAAA-A-UUG-ACUCAAU-AACAAAU
NC_040939.1/82864-82817   AAGAGCCUA---GAG----CCA-AU-AAAG-A---CUA----AGAAA-G-UUG-ACUCAAG-AACAAAU
NC_035707.1/86050-86003   AAGAGCCUA---GAG----CCA-AU-AAAG-A---CUG----AGAAA-A-UUG-ACUCAAG-AACAAAU
NC_024062.1/87257-87210   AAGAGCCUA---GAG----CCA-AU-AAAG-A---CUG----AGAAA-A-UUG-ACUCAAU-AACAAAU
NC_037422.1/83574-83528   AAGAGCCUC---GAG----CCA-AU-AAAG-A---CUA----AGAAC-A-UUG-ACUCAAA-AAGAAA-
NC_039954.1/81783-81737   AAGAGCCUU---GAG----CCA-AU-AAAA-A---CUG----AUAAA-A-UUG-ACUCAAA-AUGAAA-
NC_034367.1/81514-81469   AAGAGCCUU---GAG----CCA-AU-AAAA-A---CUG----AUAAA-A-UUG-ACUCAAA-AAAAA--
NC_035642.1/84558-84513   AAGAGCCUC---GAG----CCA-AU-AAAG-A---CUG----AGAAA-A-UUG-ACUCAAG-AACAA--
NC_035551.1/84616-84571   AAGAGCCUC---GAG----CCA-AU-AAAA-A---CUG----AGAAA-A-UUG-ACUUAAA-AAAAA--
NC_041298.1/82582-82537   --GAGCCUC---GAG----CCA-AU-AAAG-A---CUA----AGAAA-A-UUG-GCUCAAG-AACAAAU
NC_009274.1/80458-80410   AAGAGCCUU---GAG----CCA-AU-AAAA-A---CUG----AGAAA-A-UUGUACUCAAA-AACAAAU
NC_040938.1/92929-92884   -AGAGCCUC---GAG----CCA-AU-AAAG-A---CUA----AGAAA-A-UUG-ACUCAAG-AAAAAA-
NC_027960.1/82426-82380   AAGAGCUUC---GAG----CCA-AU-AAAG-A---CUG----AGAAA-A-UUG-ACUCAAA-AACGAA-
NC_035417.1/22731-22685   AAGAGCCUC---GAG----CCA-AU-AAAG-A---CUA----AGAAA-G-UUG-ACUCAAG-AAUAAA-
NC_035416.1/136822-136868 AAGAGCCUC---GAG----CCA-AU-AAAG-A---CUA----AGAAG-A-UUG-ACUCAAG-AAUAAA-
NC_044834.1/83628-83582   AAGAGCCUC---GAG----CCA-AU-AAAG-A---CUG----AGAAA-A-UUG-ACUCAAG-AAUAAA-
NC_040932.1/81184-81137   AAGAGCUUU---GAG----CUA-AU-AAAG-A---CUA----AGAAA-G-UUG-GCUCAAA-AACAAAU
NC_034792.1/84156-84109   AAGAGCUUC---GAG----CCA-AU-AAAG-A---CUG----AGAAA-A-UUG-ACUUAAA-AACAAAU
NC_041137.1/84242-84195   AAGAGUCUC---GAG----CCA-AU-AAAA-A---CUG----AGAAG-A-UUG-ACUCAAG-AACAAAU
NC_042149.1/82040-81994   AAGAGCUUU---GAG----CCA-AU-AAAG-A---CUA----AGAAU-A-UUG-ACUCAAU-AACUAA-
NC_029460.1/89884-89837   AAGAGCUUC---GAG----CCA-AU-AAAG-A---CUA----AGAAG-A-UUG-ACUCAAG-AACAAAU
NC_031207.1/85112-85065   AAGAGCUUC---GAG----CCA-AU-AAAG-A---CUG----AGAAA-A-UUG-ACUCAAG-AACAAAU
NC_035239.1/84721-84674   AAGAGCCUC---GAG----CCA-AU-AAAG-A---CUG----AGAAA-A-UUG-ACUUAAG-AACAAAU
NC_044098.1/84395-84348   AAGAGCCUC---GAG----UCA-AU-AAAG-A---CUA----AGAAG-A-UUG-ACUCAAG-AACAAAU
NC_041274.1/84421-84375   AAGAGCCUC---GAG----CCA-AU-AAAG-A---CUA----AGAAG-G-UUG-ACUCAAA-AACACA-
NC_041482.1/82126-82079   AAGAGCUUU---GAG----CCA-AU-AAAG-A---CUG----AGAAG-A-UUG-ACUCAAG-AACAAAU
NC_037758.1/86348-86301   AAGAGCCUU---GAG----UCA-AU-AAAG-A---CUG----AGAAG-A-UUG-ACUCAAG-AACAAAU
NC_032684.1/85642-85595   AAGAGCCCC---GAG----CCA-AU-AAAA-A---CUG----AGAAA-A-UUG-ACUUAAG-AACAAAU
NC_039653.1/85320-85273   AAGAGCCCC---GAG----CCA-AU-AAAA-A---CUG----AGAAG-A-UUG-ACUCAAG-AACAAAU
NC_044828.1/84170-84123   AAGAGCCCC---GAG----CCA-AU-AAAG-A---CUG----AGAAA-A-UUG-ACUCAAG-AACAAAU
NC_014807.1/86844-86797   AAGAGCCCC---GAG----CCA-AU-AAAG-A---CUG----AGAAG-A-UUG-ACUCAAA-AACAAAU
NC_044802.1/84913-84866   AAGAGCCUC---GAG----CCA-AU-AAAG-A---CUG----AGAAA-G-UUG-ACUCAAG-AACAAAU
NC_042892.1/82280-82233   AAGAGCCUC---GAG----CCA-AU-AAAG-A---CUG----AGAAG-A-UUG-ACUCAAG-AACAAAU
NC_037883.1/86045-85998   AAGAGCCUC---GGG----CCA-AU-AAAG-A---CUG----AGAAG-A-UUG-ACUCAAA-AACAAAU
NC_041432.1/86666-86620   AAGAGCCUU---GAG----UCA-AU-AAAA-A---CUG----AGAAG-A-UUG-ACUCAAG-AAGAAA-
NC_035743.1/82766-82720   AAGAGCCCC---GAG----CCA-AU-AAAG-A---CUA----AGAAC-A-UUG-ACUCAAA-AAUAAA-
NC_041239.1/86483-86438   AAGAGCCUC---GAG----CCA-AU-AAAG-A---CUA----AGAAU-A-UUG-ACUCAAA-AAAAA--
NC_041281.1/84731-84684   AAGAGCUUC---GAG----CCA-AU-AAAG-A---CUG----AGAAA-A-UUG-ACUCAAC-AACAAAU
NC_024681.1/84272-84226   AAGAGCCUC---GAG----CCA-AU-AAAG-A---CUA----AGAAC-A-UUG-ACUCAAA-ACUAAA-
NC_030582.1/87198-87151   AAGAGUCUG---GAG----CCA-AU-AAAG-A---CUG----AGAAA-A-UUG-ACUCAAU-AACAAAU
NC_037413.1/83059-83012   AAGAGCCUC---GGG----UCA-AU-AAAG-A---CUA----AGAAC-A-UUG-ACUCAAA-AACAAAU
NC_044835.1/84613-84567   AAGAGCCUA---GAG----CCA-AU-AAAG-A---CUG----AGAAA-A-UUG-ACUCAAG-AAUAAA-
NC_044667.1/1463-1507     --GAG-CUU---GAG----CCA-AU-AAAA-A---CUG----AGAAG-A-UUG-ACUCAAA-AACAAAU
NC_029211.1/87826-87779   AAGAGCCUG---GAG----CCA-AU-AAAG-A---CUG----AGAAG-A-UUG-ACUCAAG-AACAAAU
NC_030534.1/86850-86803   AAGAGCCCG---GAG----CCA-AU-AAAG-A---CUG----AGAAA-A-UUG-ACUCAAU-AACAAAU
NC_044821.1/84426-84380   AAGAGCCUC---GAG----CCA-AU-AAAG-A---CUG----AGAAA-A-UUG-ACUCAAG-AAAAAA-
NC_041582.1/84339-84293   AAGAGCCUC---GAG----CCA-AU-AAAG-A---CUA----AAAAA-A-UUG-ACUCAAG-AACAAA-
NC_044830.1/86267-86220   AAGAGCCUC---GAG----CCA-AU-AAAG-A---CUG----AGACA-A-UUG-ACUCAAG-AACAAAU
NC_041261.1/85770-85723   AAGAGCCUC---GAG----CCA-AU-AAAG-A---CUA----AGAAG-G-UUG-ACUCCAA-AACAAAU
NC_030553.1/86930-86883   AAGAGCCUG---GGG----CCA-AU-AAAG-A---CUG----AGAAA-A-UUG-ACUCAAU-AACAAAU
NC_032060.1/83094-83047   AAGAGCCUC---GGG----CCA-AU-AAAG-A---CUA----AGAGC-A-UUG-ACUCAAA-AACAAAU
NC_037696.1/86680-86634   AAGAGCCUC---GAG----CCA-AU-AAAA-A---CUG----AGAAA-A-UUG-ACUUAAG-AAAAAA-
NC_037711.1/82155-82109   AAGAGCUUC---GAG----CCA-AU-AAAG-A---CUA----AGAAA-A-UUG-ACUCAAG-AAAAAA-
NC_039575.1/86939-86892   AAGAGCCUA---GAG----CCA-AU-AAAG-A---CUG----AGAAG-A-UUG-ACUCAAG-AACAAAU
NC_041113.1/84234-84187   AAGAGCCUA---GAG----CCA-AU-AAAG-A---CUA----AGAAG-G-UUG-GCUCAAA-AACAAAU
NC_033350.1/85125-85078   AAGAGCCCA---GAG----CCA-AU-AAAG-A---CUG----AGAAA-A-UUG-ACUCAAG-AACAAAU
NC_033355.1/85710-85663   AAGAGCAUC---GAG----CCA-AU-AAAG-A---CUG----AGAAA-A-UUG-ACUCAAG-AACAAAU
NC_034936.1/84706-84659   AAGAGCCUC---GAG----CCA-AU-AAAG-A---CUG----AUAAA-A-UUG-ACUCAAG-AACAAAU
NC_030560.1/87302-87255   AAGAGCCUG---GAG----CCA-AU-AAAG-A---CUG----AGCAA-A-UUG-ACUCAAU-AACAAAU
NC_034228.1/73000-72955   AAGAGCUUU---GAG----CCA-AU-AAAG-A---CUA----AAAAU-A-UUG-ACUCAAA-AACAA--
NC_042895.1/86552-86506   -AGAGCCUC---GAG----CCA-AU-AAAG-A---CUG----AGAAG-A-UUG-ACUCAAG-AACAAAU
NC_022397.1/87028-86981   AAGAGCCUC---GAG----CCA-AU-AAAG-A---CUA----AAAAG-A-UUG-ACUCAAG-AACAAAU
NC_043793.1/87798-87752   AAGAGCCUC---GAG----CCA-AU-AAAG-A---CUG----AGAAG-A-UUG-ACUCAAG-AACAAA-
NC_042720.1/89738-89693   AAGAGCCUC---GAG----UCA-AU-AAAG-A---CUG----AGAAA-A-UUG-ACUCAAG-AACAA--
NC_023259.1/79719-79674   --AAGCCUA---GAG----CCA-AU-AAAG-A---CUA----AGAAG-A-UUG-ACUCAAG-AACAAAU
NC_035719.1/79896-79851   AAGAGCUUC---GAG----CCA-AU-AAAG-A---CUU----AGAAA-A-UUG-ACUCAAG-AACAA--
NC_035693.1/84338-84293   AAGAGCCUC---GAG----CCA-AU-AAAG-A---CUG----AGAAG-A-UUG-ACUCAAG-AACAA--
NC_042161.1/85375-85329   -GGAGCCUC---GAG----CCA-AU-AAAG-A---CUG----AGAAG-A-UUG-ACUCAAG-AACAAAU
NC_043808.1/81907-81861   AAGAGCCUU---GAG----CUA-AU-AAAA-G---CUG----AGAAG-A-UUG-ACUCAAA-AAAAAA-
NC_044824.1/84487-84441   AAGAGCCUC---GAG----CCA-AU-AAAG-A---CUG----AGAAA-A-UUG-ACUCAAG-AAUCAA-
NC_022462.1/84283-84238   AAGAGCCUC---GAG----CCA-AU-AAAG-A---CUG----AGAAG-A-UUG-ACUCAAG-AACAA--
NC_022378.1/86260-86214   -AGAGCCUC---GAG----CCA-AU-AAAG-A---CUA----AAAAG-A-UUG-ACUCAAG-AACAAAU
NC_030212.1/82338-82292   AAGAGCUUC---GAG----CCA-AU-AAAG-A---CUA----AGAAA-G-UUG-ACUCAAG-AAUAAA-
NC_034695.1/83626-83580   AAGAGCUUC---GAG----CCA-AU-AAAG-A---CUA----AGAAG-A-UUG-ACUCAAG-AAUAAA-
NC_022859.1/83657-83611   AAGAGCUUU---GAG----CCA-AU-AAAG-A---CUA----AGAAG-G-UUG-ACUCAAG-AAUAAA-
NC_044837.1/83379-83334   --GAGCCUC---GAG----CCA-AU-AAAG-A---CUG----AGAAA-G-UUG-ACUCAAG-AACAAAU
NC_036111.1/81733-81690   AAGAGCCUU---GAG----CCA-AU-AA-A-A---CUG----AGAAA-A-UUG-ACUCAAA-AAAA---
NC_035006.1/86649-86603   AAGAGCCCU---GAG----UCA-AU-AAAG-A---CUG----AGAAA-A-UUG-ACUCAAG-AACACA-
NC_022451.2/80442-80397   -AGGGCUUG---GAG----CCA-AU-AAAG-A---CUA----AGAAA-G-UUG-ACUCAAA-AAUAAA-
NC_042724.1/81826-81780   AAGAGCUUC---GAG----CCA-AU-AAAG-A---CUA----AGAAU-A-UUG-ACUCAAG-AACGAA-
NC_032040.1/84257-84210   AAGAGCUUC---GAG----CCA-AU-AAAG-A---CUG----AGAAA-A-UUG-ACUUAAG-AACAAAU
NC_044474.1/78943-78898   AAGAGCUUU---GAG----CCA-AU-AAAG-A---CUG----AGAAA-A-UUG-CCUCAAG-AACAA--
NC_022432.1/87231-87184   AAGAGCUUC---GAG----UCA-AU-AAAG-A---CUA----AGAAG-A-UUG-ACUCAAG-AACAAAU
NC_044102.1/84297-84250   AAGAGCUUC---GAG----UCA-AU-AAAG-A---CUG----AGAAA-A-UUG-ACUCAAG-AACAAAU
NC_034634.1/80085-80038   AAGAGCCUU---GGG----UUA-AU-AGAA-A---CUA----AGAAA-A-UUG-ACUCAGG-AACAAAU
NC_035973.1/88188-88141   AAGAGCCUC---GAG----UCA-AU-AAAG-A---CUG----AGAAA-A-UUG-ACUUAAG-AACAAAU
NC_036356.1/75549-75502   AAGAGCCUC---GAC----CCA-AU-AAAA-A---UUA----AGAAA-A-UUG-AGUCAAG-AACAAAU
NC_030260.1/85839-85794   AAGAGCCUC---GAG----CCA-AU-AAAG-A---CUG----AGAAA-A-UUG-ACUCAAG-AAAUA--
NC_034903.1/81405-81359   AAGAGCUUC---GAG----CCA-AU-AAAG-A---CUA----AGAAU-A-UUG-ACUCAAG-AACUAA-
NC_035415.1/77406-77360   AAGAGCCUC---GAG----CCA-AU-AAAG-A---CUA----AGAAG-G-UUG-ACUCAAG-AAUAAA-
NC_037518.1/84096-84049   AAGAGUCCC---GAG----CCA-AU-AAAG-A---CUG----AGAAA-A-UUG-ACUCAAG-AACAAAU
NC_034875.1/82020-81974   AAGAGCUUC---GAG----CCA-AU-AAAG-A---CUA----AGAAU-A-UUG-ACUCAAU-AACUAA-
NC_039729.1/84458-84411   AAGAGCCCC---GAG----UCA-AU-AAAA-A---CUG----AGAGA-A-UUG-ACUCAAG-AACAAAU
NC_036990.1/156973-157020 AAGAGCCCC---GAG----UCA-AU-AAAG-A---CUA----AGAAG-A-UUG-ACUCAAG-AACAAAU
NC_036084.1/160883-160930 AAGAGCUCU---GAG----CCA-AU-AAAG-A---CUG----AGAAG-A-UUG-ACUCAAG-AACAAAU
NC_031892.1/81726-81679   AAGAGUCUC---GAG----CCA-AU-AAAG-A---CUG----AGAAG-A-UUG-ACUCAAG-AACAAAU
NC_025655.1/82847-82800   AAGAGCUUC---GGG----CCA-AU-AAAG-A---CUA----AGAAG-A-UUG-ACUCAAG-AACAAAU
NC_042178.1/84002-83955   AAGAGCUUC---GAG----CCA-AU-AAAG-A---CUG----AGAAG-A-UUG-ACUCAAG-AACAAAU
NC_043884.1/82963-82917   AAGAGCCUC---GGG----CCA-AU-AAAG-A---CUA----AGAAC-A-UUG-ACUCAAA-AAAAAA-
NC_039727.1/84979-84934   AAGAGCCCU---GAG----UCA-AU-AAAA-A---CUG----AGAAA-A-UUG-ACUCAAG-ACAAA--
NC_032718.1/85810-85763   AAGAGCCCU---GAG----UCA-AU-AAAG-A---CUG----AGAAG-A-UUG-ACUCAAG-AACAAAU
NC_044844.1/83892-83845   AAGAGCCUC---GGG----UCA-AU-AAAG-A---CUG----AGAAA-A-UUG-ACUCAAG-AACAAAU
NC_033501.1/85083-85036   AAGAGCCUC---GAG----CCA-AU-AAAG-A---UUG----AGAAG-A-UUG-ACUCAAG-AACAAAU
NC_044845.1/83162-83115   AAGAGCCUC---GAG----UCA-AU-AAAG-A---CUG----GGAAA-A-UUG-ACUCAAG-AACAAAU
NC_026876.1/83959-83913   AAGAGCUUC---GAG----CCA-AU-AAAG-A---CUA----AGAAG-A-UUG-ACUCAAG-AACCAA-
NC_007943.1/83868-83822   AAGAGCUUC---GAG----CCA-AU-AAAG-A---CUG----AGAAA-A-UUG-ACUCAAG-AACCAA-
NC_040948.1/89239-89192   AAGAGCCUC---GAG----UCA-AU-AAAG-A---CUA----AGAAA-G-UUG-GCUCAAG-AACAAAU
NC_035694.1/84551-84506   AAGAGCCUC---GAG----ACA-AU-AAAG-A---CUG----AGAAA-A-UUG-ACUCAAG-AACAA--
NC_030784.1/84955-84910   --GAGCCUC---GAG----CCA-AU-AAAG-A---CUG----AGAAG-A-UUG-ACUCAAG-AACAAAU
NC_044154.1/84668-84622   AAGAGCUUU---GAG----CCA-AU-AAAG-A---CUG----AGAAG-A-UUG-ACUCAAG-AACCAA-
NC_018767.1/83554-83507   AAGAGCCCC---GAG----CCA-AU-AAAG-A---CUG----AGAAG-G-UUG-ACUCAAA-AACAAAU
NC_043806.1/89209-89163   AAGAGCCCC---GAG----CCA-AU-AAAG-A---CUG----AGAAA-A-UUG-ACUCAAG-AACCAA-
NC_041439.1/88066-88020   AAGAGCCUC---GAG----CCA-AU-AAAG-A---CUG----AGAAG-A-UUG-ACUCAAG-AGCAAA-
NC_029824.1/79718-79672   AAGAGCUUC---GAG----CCA-AU-AAAG-A---CUA----AGAAG-A-UUG-ACUCAAG-AAGAAA-
NC_045062.1/84513-84466   AAGAGCCUC---GAG----CCA-AU-AAAG-A---CUG----AGGAG-A-UUG-ACUCAAG-AACAAAU
NC_044797.1/85309-85262   AAGAGCCUC---GAG----CCA-AU-AAAG-A---CUG----GGAAA-G-UUG-ACUCAAG-AACAAAU
NC_041264.1/84596-84549   AAGAGCCUC---GAG----CCA-AU-AAAG-A---CUA----AGAAG-G-UUG-GCUCAAG-AACAAAU
NC_041275.1/85852-85805   AAGAGCCUC---GAG----CCA-AU-AAAG-A---CUG----AGAAG-A-UUG-GCUCAAG-AACAAAU
NC_042447.1/84567-84520   AAGAGCUUG---GAG----CCA-AU-AAAG-A---CUA----AGAAG-A-UUG-ACUCAGG-AACAAAU
NC_036311.1/83493-83447   AAGAGCUUC---GAG----CCA-AU-AAAG-A---CUG----AGAAG-A-UUG-ACUCAAA-ACCAAA-
NC_041280.1/83553-83506   AAGAGCCUC---GAG----CCA-AU-AAAG-A---CUA----AGAGG-G-UUG-GCUCAAA-AACAAAU
NC_030564.1/87387-87340   AAGAGUCCG---GAG----CCA-AU-AAAG-A---CUG----AGAAA-A-UUG-ACUCAAU-AACAAAU
NC_036940.1/85377-85331   AAGAGCCUU---GAG----UCA-AU-AAAG-A---CUA----AGAAG-A-UUG-AUUCAAG-AAAAAA-
NC_020607.1/80788-80742   AAGAGCUUA---GAG----CCA-AU-AAAG-A---CUA----AGAAU-A-UUG-ACUCAAG-AACUAA-
NC_030702.1/85063-85017   AAGAGCCUC---GAG----CCA-AU-AAAA-A---CUG----AGAAA-G-UUG-ACUUAAG-AAAAAA-
NC_035955.1/82834-82788   AAGAGCCUC---GAG----CCA-AU-AAAG-A---CUG----AGAAA-A-UUG-ACUUAAG-AAAAAA-
NC_045096.1/74037-73990   AAGAGCCCU---GAG----UCA-AU-AAAG-A---CUG----AGAAG-A-UUG-ACUCAAC-AACAAAU
NC_037852.1/82993-82947   AAGAGCUUC---GAG----CCA-AU-AAAG-A---CUA----AGAAA-A-UUG-GCUCAAG-AAAAAA-
NC_043953.1/84186-84140   AAGAGCUUC---GAG----CCA-AU-AAAG-A---CUA----AGAAG-A-UUG-ACUCAAG-AAAAAA-
NC_041585.1/84341-84295   AAGAGCCUC---GAG----UCA-AU-AAAG-A---CUA----AAAAA-A-UUG-ACUCAAG-AACAAA-
NC_037176.1/88587-88541   AAGAGCCUC---GAG----CCA-AU-AAAG-A---CUG----AGAAA-A-UUG-ACUUAAU-AAAAAA-
NC_015113.1/82864-82818   AAGAGCUUC---GAG----CCA-AU-AAAG-A---CUA----AGAAA-A-UUG-GCUCAAU-AAAAAA-
NC_036021.1/83141-83095   AAGAGCCUC---GAG----CCA-AU-AAAG-A---CUG----AGAAG-A-UUG-ACUCAAG-AAAAAA-
NC_041263.1/80646-80693   AAGAGCCUA---GAG----UCA-AU-AAAG-A---CUA----AGAAA-G-UUG-GCUCAAG-AACAAAU
NC_042740.1/86222-86175   AAGAGCCUA---GAG----UCA-AU-AAAG-A---CUG----AGAAG-A-UUG-ACUCAAG-AACAAAU
NC_031887.1/83052-83006   AAGAGCCCC---GAG----CCA-AU-AAAG-A---CUG----AGAAA-A-UUG-ACUCAAG-AAAAAA-
NC_033910.1/88582-88535   AAGAGCCUU---GAG----UCA-AU-ACAG-A---CUG----AGAAG-A-UUG-ACUCAAG-AACAAAU
NC_032687.1/86019-85973   AAGAGCCCC---GAG----CCA-AU-AAAA-A---CUG----AGAAA-A-UUG-ACUUAAG-AAAAAA-
NC_031888.1/82283-82237   AAGAGCCUC---GAG----CCA-AU-AAAG-A---CUG----AGAAG-A-UUG-ACUCAAU-AAAAAA-
NC_043809.1/84450-84404   AAGAGCCUC---GAG----CCA-AU-AAAG-A---CUG----AGAAU-A-UUG-ACUCAAG-AAAAAA-
NC_033878.1/84853-84807   -AGAGCUUC---GAG----CCA-AU-AAAG-A---CUG----AGAAA-A-UUG-ACUUAAG-AACAAAU
NC_044718.1/81393-81347   AAGAGACUC---GAG----CCA-AU-AAAG-A---CUG----AGAAG-A-UUG-ACUCAAA-AAUAAA-
NC_040992.1/79039-78992   AAGAGCCCA---GAG----CCA-AU-AAAA-A---CUG----AGAGG-A-UUG-ACUCAAG-AACAAAU
NC_041245.1/90047-90000   AAGAGCCUC---GAG----CCA-AU-AAAG-A---CUA----AGAAG-G-UUG-ACUCCAG-AACAAAU
NC_040941.1/83294-83247   AAGAGCCUA---GAG----CCA-AU-AAAG-G---CUA----AGAAG-G-UUG-GCUCAAA-AACAAAU
NC_035054.1/86721-86675   AAGAGCUUC---GAG----CCA-AU-AAAG-A---CUA----AGAAA-A-UUG-GCUCAAC-AAAAAA-
NC_039781.1/82994-82948   AAGAGCUUU---GAG----CCA-AU-AAAG-A---CUA----AAAAG-A-UUG-ACUCAAG-AAUAAA-
NC_030053.1/82950-82903   AAGAGCUUC---GAG----ACA-AU-AAAG-A---CUG----AGAAA-A-UUG-ACUCAAG-AACAAAU
NC_019616.1/89672-89625   AAGAGACUC---GAG----CCA-AU-AAAG-A---CUG----AGAAG-A-UUG-ACUCAAG-AACAAAU
NC_044106.1/86551-86504   AAGAGCAUC---GAG----CCA-AU-AAAG-A---CUG----AGAAG-A-UUG-ACUCAAG-AACAAAU
NC_033871.1/84880-84833   AAGAGCCCC---GAG----ACA-AU-AAAG-A---CUG----AGAAG-A-UUG-ACUCAAA-AACAAAU
NC_041492.1/85638-85592   AAGAGCUUC---GAG----CCA-AU-AAAG-A---CUG----AGAAG-A-UUG-ACUCAAG-AACAAA-
NC_043919.1/88103-88057   AAGAGCCUU---AAG----CCA-AU-AAAG-A---CUG----AGAAA-A-UUG-ACUUAAG-AACCAA-
NC_034641.1/81109-81063   AAGAGCCUU---AAG----CCA-AU-AUAG-A---CUG----AGAAA-A-UUG-ACUUAAA-AAUAAA-
NC_023256.1/83658-83613   --AAGCCUC---GAG----CCA-AU-AAAG-A---CUG----AGAAG-A-UUG-ACUCAAG-AACAAAU
NC_022406.1/86675-86628   AAGAGCCUC---GAG----UCA-AU-AAAG-A---CUA----AAAAG-A-UUG-ACUCAAG-AACAAAU
NC_041258.1/87330-87283   AAGAGCCUC---GAG----CCA-AU-AAAG-A---CUA----AUAAG-G-UUG-ACUCAAG-AACAAAU
NC_022414.1/86272-86225   AAGAGCCUC---GAG----CCA-AU-AAAG-A---CUG----AAAAG-A-UUG-ACUCAAG-AACAAAU
NC_030331.1/84029-83983   AAGAGCCUC---GAG----CCA-AU-AAAG-A---CUG----AGAAA-A-UUG-ACUUAAG-AAAAAA-
NC_037400.1/82965-82919   AAGAGACUC---GAG----CCA-AU-AAAG-A---CUG----AGAAG-A-UUG-ACUCAAA-AAGAAA-
NC_033343.1/83964-83918   AAGAGCUUU---GAG----CCA-AU-AAAG-A---CUA----AUAAA-A-UUG-GCUCAAG-AAAAAA-
NC_028023.1/79174-79130   AAGAGCCUA---GAG----CCA-AU-AAAG-A---CUA----AGAAG-A-UUG-GCUCAAA-A-CAA--
NC_016734.1/81076-81030   AAGAGCCUU---GAG----ACA-AU-CAAA-A---CUG----AGAAA-A-UUG-CCUCAAA-AAAAAA-
NC_035502.1/81981-81935   AAGAGCUUC---GAG----CCA-AU-AAAG-A---CUA----AUAAA-A-UUG-ACUCAAG-AAAAAA-
NC_036098.1/79413-79368   --GAGCUUC---GAG----CCA-AU-AAAG-A---CUG----AGAAG-A-UUG-ACUCAAG-AACAAAU
NC_028032.1/82401-82357   --GAGCCCU---GAG----UCA-AU-AAAA-A---CUG----AGAAG-A-UUG-ACUCAAG-AUCAAA-
NC_036972.1/80724-80678   AAGAGCUUC---GAG----CCA-AU-AAAG-A---CUA----AGAAG-A-UUG-ACUCAAG-GAUAAA-
NC_041091.1/80806-80760   AAGAGCUUU---GAG----UCA-AU-AAAG-A---CUA----AGAAG-G-UUG-ACUCAAG-AAUAAA-
NC_037392.1/83649-83603   AAGAGCCCC---GAG----CCA-AU-AAAG-A---CUG----AGAAA-G-UUG-ACUCAAA-AAAAAA-
NC_044779.1/84454-84408   AAGAGCCCC---GAG----CCA-AU-AAAG-A---CUG----AGAAA-A-UUG-ACUCAAG-AAUCAA-
NC_033503.1/86917-86871   AAGAGCCCC---GAG----UCA-AU-AAAG-A---CUG----AGAAA-A-UUG-ACUCAAG-AACAUA-
NC_038062.1/80885-80839   AAGAGCUUC---GAG----CCA-AU-AAAG-A---CUA----AGAAG-A-UUG-ACUCAAG-UAUAAA-
NC_036412.1/85420-85376   AAGAGCCUC---GAG----CCA-AU-AAAG-A---CUG----AGAAG-A-UUG-ACUCAAG-AACC---
NC_037882.1/81038-80990   AAGAGCCUC---GAG----CCA-AUUAAAG-A---CUA----AGAAG-A-UUG-ACUCAAG-AACAAAU
NC_025658.1/82680-82634   AAGAGCUUC---GGG----CCA-AU-AAAG-A---CUA----AGAAG-A-UUG-ACUCAAG-AAUAAA-
NC_042916.1/158274-158320 AAGAGCUUC---GAG----CCA-AU-AAAG-A---CUA----AGAAG-G-UUG-ACUCAAG-AAUAAA-
NC_030482.1/84213-84169   --GAGCCUC---GAG----CCA-AU-AAAA-A---CUG----AGAAG-A-UUG-ACUUAAG-AAAAAA-
NC_036076.1/77133-77087   AAGAGCUUC---GAG----CCA-AU-AAAG-A---CUG----AGAAG-A-UUG-ACUCAAG-AAUAAA-
NC_023833.1/82805-82759   AAGAGCUUC---GAG----CUA-AU-AAAG-A---CUA----AGAAU-A-UUG-ACUCAAG-AACUAA-
NC_040141.1/85579-85534   AAGAGCUUU---GAG----CCA-AU-AAAG-A---CUG----AGAAG-A-UUG-ACUCAAG-AAACA--
NC_034693.1/82381-82335   AAGAGCUUC---GGG----CCA-AU-AAAG-A---CUA----AGAAG-G-UUG-ACUCAAA-AAUAAA-
NC_028067.1/84041-83994   AAGAGUCCC---GAG----UCA-AU-AAAG-A---CUG----AGAAA-A-UUG-ACUCAAG-AACAAAU
NC_029817.1/79426-79381   AAGAGCUUC---GAG----CCA-AU-AAAG-A---CUA----AGAAG-A-UUG-ACUCAAG-AAGAA--
NC_036755.1/87413-87367   AAGAGCCCC---GAG----UCA-AU-AAAG-A---CUG----AGAAA-A-UUG-ACUCAAG-AACACA-
NC_033366.1/79798-79753   AAGAGCUUU---GAG----CCA-AU-AAAG-A---CUG----AGAAG-A-UUG-ACUCAAG-CACAA--
NC_026986.1/83567-83523   --GAGCCUC---GAG----CCA-AU-AAAG-A---CUA----AAACA-A-UUG-ACUCAAG-AACAAA-
NC_041241.1/83698-83652   AAGAGCCUC---GAG----CCA-AU-AAAG-A---CUA----AGACG-A-UUG-GCUCAAA-AAAAAA-
NC_042739.1/85958-85911   AAGAGCUUC---GAG----UCA-AU-AAAG-A---CUG----AGAAG-A-UUG-ACUCAAG-AACAAAU
NC_036341.1/84468-84420   -AGAGCCUCGACGAG----CCA-AU-AAAG-A---CUA----AGAAA-A-UUG-ACUCAAA-AAUCAA-
NC_031383.1/87133-87089   AAGAGCCUA---GAG----CCA-AU-AAAG-A---CUG----AGAAG-A-UUG-ACUCAAG-AACA---
NC_031385.1/88129-88084   --GAGCCUC---GGG----CCA-AU-AAAG-A---CUG----AGAAG-A-UUG-ACUCAAG-AACAAAU
NC_042448.1/84576-84530   AAGAGCUUG---GAG----CCA-AU-AAAG-A---CUA----AGAAG-A-UUG-ACUCAGG-AAUAAA-
NC_038194.1/82173-82127   AAGAGCUUC---GGG----CCA-AU-AAAG-A---CUA----AGAAU-A-UUG-ACUCAAG-AACUAA-
NC_039732.1/84847-84802   AAGAGCCCU---GAG----UCA-AU-AAAA-A---CUG----AGAAG-A-UUG-ACUCAAG-ACAAA--
NC_031395.1/81933-81887   AAGAGCUUC---GAG----CCA-AU-AAAG-G---CUA----AGAAU-A-UUG-ACUCAAG-AACUAA-
NC_035140.1/84729-84683   AAGAGCCUC---GAG----CCA-AU-AAAG-A---CUA----AGAAG-G-UUG-GCUCAAG-AAUAAA-
NC_042715.1/54219-54172   AAGAGCCCC---GAG----UCA-AU-AAAG-A---CUG----AGAAG-G-UUG-ACUCAAA-AACAAAU
NC_042444.1/82066-82020   AAGAGCUUG---GAG----CCA-AU-AAAG-A---CUA----AGAAG-G-UUG-ACUCAAG-AAUAAA-
NC_029770.1/177664-177708 -AGAGCCUC---GAG----CCA-AU-AAAC-A---CUA----AGAAG-A-UUG-ACUCAGG-AAAAA--
NC_040113.1/99238-99191   AAGAGCCUC---GAG----UCA-AU-AAAG-A---CUG----AGAAG-A-UUG-ACUCAAG-GACAAAU
NC_012224.1/89441-89396   AAGAGCCUC---GAG----UCA-AU-AAAG-A---CUA----AGCAG-A-UUG-ACUCAAA-GACAA--
NC_037401.1/81308-81262   AAGAGACUC---GAG----CCA-AU-AAAG-A---CUG----AGAAG-A-UUG-ACUCAAA-AAUGAA-
NC_036991.1/80734-80688   AAGAGCCUC---GAG----CCA-AU-AAAG-A---CUA----AGAAG-G-UUG-GCUCUAA-AAUAAA-
NC_036082.1/79687-79640   AAGAGCUUC---GAG----CCA-AU-AAAG-A---CUG----AGAGG-A-UUG-ACUCAAG-AACAAAU
NC_026570.1/85080-85033   AAGAGCUUC---GAG----CCA-AU-AAAG-A---CUG----AGAAG-G-UUG-ACUCAAG-AACAAAU
NC_008335.1/90130-90083   AAGAGCCUC---GAG----UCA-AU-AAAG-A---CUG----AGGAG-A-UUG-ACUCAAG-AACAAAU
NC_040949.1/76455-76408   AAGAGCUUC---GAG----CCA-AU-AAAG-A---CUA----AGAAG-G-UUG-GCUCAAA-AUCAAAU
NC_024929.1/85658-85612   AAGAGCCCC---GAG----CCA-AU-AAAA-A---CUG----AGAAA-A-UUG-ACUUAAG-CAAAAA-
NC_041612.1/83994-83948   AAGAGCUUC---GAG----CCA-AU-AAAG-A---CUG----AGAAG-A-UUG-ACUCAAG-AACCAA-
NC_039129.1/86662-86617   AAGAGCCCC---GAG----UCA-AU-AAAG-A---CUG----AGAAA-A-UUG-ACUCAAG-AACAU--
NC_029431.1/88014-87967   AAGAGCCUC---GAG----UCA-AU-AAAA-A---CUG----AGUAG-A-UUG-ACUCAGG-AACAAAU
NC_021449.1/79779-79733   AAGAGCUUC---GAG----CCA-AU-AAAG-A---CUA----AGAGG-A-UUG-ACUCAAA-AUGAAA-
NC_039599.1/84188-84142   AAGAGCUUC---GAG----CCA-AU-AAAG-A---CUG----AGAAG-A-UUG-ACUCAAU-AACCAA-
NC_021101.1/83963-83917   -AAAGUCUC---GAG----CCA-AU-AAAG-A---CUG----AGAAG-A-UUG-ACUCAAG-AACAAAU
NC_037485.1/81671-81625   AAGAGCUUA---GAG----CCA-AU-AAAG-A---CUA----AGAGG-G-UUG-ACUCAAA-AAUAAA-
NC_043807.1/86682-86636   AAGAGUCUC---GAG----UCA-AU-AAAG-A---CUA----AGAAG-A-UUG-ACUCAAG-AAAAAA-
NC_041293.1/84648-84602   AAGAGCCUC---GAG----CCA-AU-AAAG-A---CUA----AGAAG-G-UUG-GCUCAAG-AACACA-
NC_027685.1/84488-84442   AAGAGCUUC---GAG----UCA-AU-AAAG-A---CUA----AGAAG-A-UUG-ACUCAAG-AAAAAA-
NC_043912.1/86410-86363   AAGAGCCCC---GAG----CCA-AU-AAAG-A---CUG----AGAGG-A-UUG-ACUCAAG-AACAAAU
NC_045126.1/83949-83902   AAGAGCCCC---GAG----CCA-AU-AAAG-A---CUG----AGAGG-G-UUG-ACUCAAA-AACAAAU
NC_036099.1/85597-85551   AAGAGCCUC---GAG----CCA-AU-AGAG-A---CUG----AGAAA-A-UUG-ACUUAAG-AAAAAA-
NC_036069.1/85372-85326   AAGAGCUUC---GAG----CCA-AU-AAAG-A---CUG----AGAAG-A-UUG-ACUCAAG-AAAAAA-
NC_030601.1/89254-89208   AAGAGCCUC---GAG----CCA-AU-AAAG-A---UUG----AGAAG-A-UUG-ACUCAAG-AAAAAA-
NC_037152.1/87240-87193   AAGAGCCCC---GAG----CCA-AU-AAAU-A---CUG----AGAGG-A-UUG-ACUCAAG-AACAAAU
NC_035876.1/80858-80812   AAGAGCUUC---GAG----CCA-AU-AAAG-A---CUA----AGAGG-G-UUG-ACUCAAA-AAGAAA-
NC_034323.1/81759-81713   AAGAGCUUC---GAG----CCA-AU-AAAG-A---CUA----AGACU-A-UUG-ACUCAAG-AACUAA-
NC_044473.1/85457-85411   AAGAGCCCU---GAG----UCA-AU-AAAG-A---CUG----AGAAG-A-UUG-ACUCAAG-ACCAAA-
NC_033377.1/79689-79643   AAGAGCUUC---GAG----CCA-AU-AAAG-A---CUG----AGAAG-A-UUG-ACUCAAG-CACAAA-
NC_035548.1/81910-81863   AAGAGCCCU---GAG----CCA-AU-AAAG-A---CUG----AGAGG-G-UUG-ACUCAAG-AACAAAU
NC_041136.1/86265-86218   AAGAGUCUC---GAG----CCA-AU-AAAG-A---CUG----AGAAG-A-UUG-ACUCACG-AACAAAU
NC_036834.1/82499-82452   AAGAGCCUU---GAG----CCA-AU-AAAAGA---CUG----AGAAG-A-UUG-ACUCAAG-AAUAAA-
NC_040942.1/84197-84151   AAGAGCCUC---GAG----CCA-AU-AAAG-A---CUA----AGAAG-G-UUG-GCUCAAG-AACCAA-
NC_023798.1/83919-83873   AAGAGCCCU---GAG----CCA-AU-AAAG-A---CUG----AGAAG-G-UUG-ACUCAAG-AAAAAA-
NC_033535.1/95548-95501   AAGAGCCUC---GAG----CCA-AU-AAAG-A---CUG----AGAAA-A-UUG-ACUUUAAGAACAAA-
NC_040997.1/83501-83455   AAGAGCCCC---GAG----CCA-AU-AAAG-A---CUG----AGAAG-G-UUG-ACUCAAA-AAAAAA-
NC_039924.1/81759-81713   AAGAGCCCC---GAG----CCA-AU-AAAG-A---CUG----AGAAA-G-UUG-GCUCAAA-AAAAAA-
NC_042713.1/91500-91453   AAGAGACUC---GAG----UCA-AU-AAAG-A---CUG----AGAAG-A-UUG-ACUCAAG-AACAAAU
NC_037412.1/83048-83003   -AAAGCCUC---GGG----CCA-AU-AAAG-A---CUA----AGAAC-A-UUG-ACUCAAA-AAAAAA-
NC_037706.1/82632-82588   -AGAGCCUC---GAG----CCA-AC-AAAG-A---CUA----AGAAC-G-UUG-ACUCAAA-AAAAA--
NC_038120.1/133549-133595 AAGAGCCUC---GAG----CCA-AU-AAAA-A---CUA----AUAAC-A-UUG-GCUCAAG-AAAAAA-
NC_041580.1/83710-83664   AAGAGCUGC---GAG----CCA-AU-AAAG-A---CUA----AGAAA-A-UUG-GCUCAAG-AAAAAA-
NC_031509.1/78916-78869   AAGAGCCCA---GAG----CCA-AU-AAAG-A---CUG----AGAGG-A-UUG-ACUCAAG-AACAAAU
NC_037948.1/84706-84662   AAGAGCUUC---GAG----CCA-AU-AAAG-A---CUG----AGAAG-A-UUG-ACUCAAA-A-CAA--
NC_024258.1/83460-83413   AAGAGACCC---GAG----CCA-AU-AAAG-A---CUG----AGAAG-G-UUG-ACUCAAA-AACAAAU
NC_034310.1/82847-82801   AAGAGCUUC---GAG----CCA-AU-AAAG-A---CUA----AAAAG-A-UUG-ACUCAAG-AAUAAA-
NC_037443.1/85268-85222   AAGAGCCUC---GAG----CCA-AU-ACAG-A---CUG----AGAAA-A-UUG-ACUUAAG-AAAAAA-
NC_035950.1/82908-82864   -GGAGCCUC---GAG----CCA-AU-AAAG-A---CUA----AGAAC-G-UUG-ACUCAAA-AUAAA--
NC_041117.1/85256-85214   AAGAGCCUU---GAG----UCA-AU-AAAG-A---CUA----AGAAG-A-UUG-AUUCAAG-AA-----
NC_040178.1/85219-85174   AAGAGCUUC---GAG----CCA-AU-AAAG-A---CUG----AGAAG-A-UUG-ACUCAAG-AACCA--
NC_039628.1/83179-83132   AAGAGCCCC---GAG----ACA-AU-AAAG-A---CUG----AGAAG-A-UUG-ACUCAAG-AACAAAU
NC_031884.1/83823-83777   AAGAGCCGC---GAG----CCA-AU-AAAG-A---CUG----AGAAG-A-UUG-ACUCAAG-AAAAAA-
NC_032689.1/86074-86032   AAGAGUCCC---GAG----CCA-AU-AAAA-A---CUG----AGAAA-A-UUG-ACUUAAA-AA-----
NC_034931.1/81594-81547   AAGAGCUUC---GAG----CCA-AU-AAAG-A---CUG----AGAAA-G-UUG-ACUCACC-AACAAAU
NC_036807.1/86256-86209   AAGAGCCCC---GAG----ACA-AU-AAAG-A---CUG----AGAAU-A-UUG-ACUCAAG-AACAAAU
NC_032031.1/83660-83616   AAGAGCCUC---GAG----CCA-AU-AAAG-A---CUA----AGAAC-G-UUG-ACUCAAA-GUAA---
NC_027728.1/84703-84660   -GGAGCCUC---GAG----CCA-AU-AAAG-A---CUA----AGAAC-G-UUG-ACUCAAA-AUAA---
NC_022413.1/86245-86198   AAGAGCCUC---GGG----CCA-AU-AAAG-A---CUG----AAAAG-A-UUG-ACUCAAG-AACAAAU
NC_031805.1/82106-82062   --GAGCUUC---GAG----UCA-AU-AAAG-A---CUA----AGAAG-A-UUG-ACUCAAG-AAUAAA-
NC_022814.1/84497-84452   AAGAGCUUC---GAG----UCA-AU-AAAG-A---CUA----AGAAG-A-UUG-ACUCAAG-AAAAA--
NC_036079.1/81359-81314   -AGAGCUUC---GAG----CCA-AU-AAAG-A---CUG----AGAAG-A-UUG-ACUCAAG-AAGAAA-
NC_029394.1/83169-83123   AAGAGCUUC---GAG----CCA-AU-AAAG-A---CUA----AUAAA-A-UUG-GCUCAAG-AAAAAA-
NC_041271.1/85054-85008   AAGAGCCUC---GAG----CCA-AU-AAAG-A---CUA----AUAAG-G-UUG-ACUCAAG-AAAAAA-
NC_038118.1/83910-83864   AAGAGCCUC---GAG----CCA-AU-AAAG-A---CUG----AUAAA-A-UUG-GCUCAAG-AAAAAA-
NC_039379.1/84056-84010   AAGAGCCCU---GAG----CCA-AU-AAAG-A---CUG----AGAAG-G-UUG-ACUCAAG-AAAAAA-
NC_043820.1/82624-82578   AAGAGCCUC---GAG----CCA-AU-AAAG-A---CUG----AUAAA-A-UUG-GCUCAAU-AAAAAA-
NC_041550.1/87295-87249   AAGAGCUUU---GAG----UUA-AU-AAAG-A---CUG----AGAAG-A-UUG-ACUCAAG-AACAGA-
NC_040001.1/86612-86566   AAGAGCCCC---GAG----UCA-AU-AAAG-A---CUG----AGAAA-A-UUG-ACUUAAG-AACAUA-
NC_020431.1/80770-80724   AAGAGCUUU---GAG----UCA-AU-AAAG-A---UUA----AGAAG-G-UUG-ACUCAAG-AAUAAA-
NC_032686.1/86254-86214   AAGAGCCCC---GAG----CCA-AU-AAAA-A---CUG----AGAAA-A-UUG-ACUUAAG--------
NC_036080.1/79637-79592   AAGAGCUUU---GAG----UCA-AU-AAAG-A---CUG----AGAAA-A-UUG-ACUCACG-UACAA--
NC_031345.1/81553-81507   AAGAGCUUC---GAG----UCA-AU-AAAG-A---CUA----AGAAG-G-UUG-ACUCAAG-AAUAAA-
NC_043824.1/83487-83441   AAGAGCCUC---GAG----CCA-AU-AAAA-A---CUG----AUAAC-A-UUG-GCUCAAG-AAAAAA-
NC_040984.1/89381-89334   AAGAGCCGC---GAG----CCA-AU-CAAG-A---CUG----AUAAA-A-UUG-ACUCAAG-AACAAAU
NC_028066.1/80065-80019   AAGAGCCCA---GAG----CCA-AU-AAAG-A---CUG----AGAGG-A-UUG-ACUCAAG-AACAAA-
NC_044094.1/83990-83945   AAGAGCCCC---GAG----CCA-AU-AAAG-A---CUG----AGAGG-G-UUG-ACUCAAA-AACAA--
NC_039730.1/82245-82201   --GAGCCCU---GGG----UCA-AU-AAAA-A---CUG----AGAAG-A-UUG-ACUCAAG-AUCAAA-
NC_041413.1/86511-86465   AAGAGCCCC---GAG----UCA-AU-AAAG-A---CUA----AGAGG-A-UUG-ACUCAAG-AAUAAA-
NC_042926.1/83506-83458   AAGAGCCUC---GAG----CCA-AUUAAAG-A---CUG----AGAAG-A-UUG-ACUCAAG-AACAAAU
NC_045109.1/67901-67855   AAGAGCUUC---GAG----UCA-AU-AAAG-A---CUA----AGAAU-A-UUG-ACUUAAG-AACCAA-
NC_041424.1/81863-81817   AAGAGCUUC---GAG----CCA-AU-AAAG-A---CUA----AGAGG-G-UUG-ACUCAAG-AAUAAA-
NC_016468.1/82783-82739   --GAGCUUC---GAG----CCA-AU-AAAG-A---CUA----AGAAG-G-UUG-ACUCAAG-AAGAAA-
NC_044862.1/81047-81001   AAGAGCUUC---GAG----CCA-AU-AAAG-A---CUA----AGAAG-G-UUG-ACUCAAG-ACUAAA-
NC_035896.1/82959-82913   AAGAGCCUU---GAG----UCA-AU-AAAG-A---CUG----AGAAG-A-UUG-AUUCAAG-AGAAAA-
NC_042390.1/84135-84093   -GGAGCCUC---GAG----CCA-AU-AAAG-A---CUA----AGACC-A-UUG-ACUCAAA-AUU----
NC_042727.1/82958-82912   AAGAGCUUG---GAG----UCA-AU-AAAG-A---CUA----AGAAG-G-UUG-ACUCAAG-AAUAAA-
NC_031433.1/81824-81778   AAGAGCUUC---GAG----CCA-AU-UAAG-A---CUA----AGAAG-G-UUG-ACUCAAG-AAUAAA-
NC_037078.1/78737-78691   AAGAGCUUA---GAG----CCA-AU-AAAG-A---CUA----AGAAG-A-UUG-ACUCAUG-AUUAAA-
NC_033975.1/86019-85973   AAGAGCCCC---GAG----CCA-AU-AAAG-A---CUG----AGAAG-G-UUG-ACUCAAG-AAUAAA-
NC_042884.1/87708-87661   AAGAGCUCU---GAG----UCA-AU-AAAG-A---CUG----AGAGU-A-UUG-ACUCAAU-AACAAAU
NC_037083.1/79865-79819   AAGAGCUUG---GAG----CCA-AU-AAAG-A---CUA----AGAGA-A-UUG-ACUCACG-AUUAAA-
NC_041268.1/84203-84156   AAGAGCCCC---GAG----CCA-AU-AAAG-A---CUA----AGAAG-G-UUG-GUUCAAG-AACAAAU
NC_028410.1/86475-86427   AAGAGCCUC---GAG----CCA-AU-AAAG-A---CUA----AAAAG-AUUUG-ACUCAAG-AACAAAU
NC_025652.1/78496-78450   AAGAGCUUA---GAG----CCA-AU-AAAG-A---CUA----AGAAG-A-UUG-ACUCACG-AUUAAA-
NC_039752.1/86291-86245   AAGAGUCUC---GAG----UCA-AU-AAAG-A---CUA----GGAAG-A-UUG-ACUCAAG-AAAAAA-
NC_025772.2/85286-85239   AAGAGCCCC---GAG----UCA-AU-AAAG-A---CUG----AGAGU-A-UUG-ACUCAAG-AACAAAU
NC_025653.1/81954-81908   AAGAGCUUC---GAG----CCG-AU-AAAG-A---CUA----AGAGG-A-UUG-ACUCAAA-AUAAAA-
NC_035960.1/87731-87685   AAGAGCCCC---GAG----UCA-AU-AAAG-A---CUG----AGAAA-A-UUG-ACUCACG-AACACA-
NC_037705.1/82633-82589   --GAGCCUC---GAG----UCA-AC-AAAG-A---CUA----AGAAC-G-UUG-ACUCAAA-AAAAAA-
NC_031445.1/84753-84706   AAGAGCUUG---GAG----UCA-AU-AAAG-A---CUA----AGAAG-G-UUG-ACUCAGG-AACAAAU
NC_045219.1/85332-85285   AAGAGCUUC---GGG----CCA-AU-AAAG-A---CUG----AGAAG-G-UUG-ACUCAAG-AACAAAU
NC_021425.1/162464-162511 AAGAGCCUC---GAG----UCA-AU-AAAG-A---CUG----AGGAG-A-UUG-ACUCAGG-AACAAAU
NC_042597.1/80096-80050   AAGAGCCUA---GAA----CCA-AU-AAAG-A---CUG----AGAAA-A-UUG-AUUCAAG-AAAAAA-
NC_036761.1/81264-81218   AAGAGCCCC---GAG----UCA-AU-AAAA-A---CUG----AGAAG-A-UUG-GCUCAAG-AAAAAA-
NC_037462.1/83055-83009   AAGAGCUUC---GAG----CCA-AU-AAAG-A---CUA----AGAGG-G-UUG-ACUCAAG-AAAAAA-
NC_036075.1/79980-79936   AAGAGCUUC---GAG----CCA-AU-AAAG-A---CUG----AGAGG-A-UUG-ACUCAAA-AAAA---
NC_029339.1/85899-85855   AAGAGCGUA---GAG----CCA-AU-AAAG-A---CUG----AGAAG-A-UUG-ACUCAAG-AACA---
NC_042204.1/84651-84605   AAGAGCUGC---GAG----CCA-AU-AAAG-A---CUG----AGAAG-A-UUG-ACUCAAG-AACCAA-
NC_029227.1/80702-80655   AAGAGCCUC---GGG----UUA-AU-ACAA-A---CUG----AGUAG-A-UUG-ACUCAAA-AACAAAU
NC_043816.1/135619-135665 AAGAGCCUC---GAG----CCA-AU-AAAG-A---CUA----AUAAC-A-UUG-GCUCAAG-AAAAAA-
NC_043802.1/82238-82191   AAGAGCCCC---GAG----UCA-AU-AAAG-A---CUG----AGAAG-A-UUG-ACUCACG-AACAAAU
NC_039719.1/28438-28392   AAGAGCUCC---GAG----CCA-AU-AAAG-A---CUG----AUAAA-A-UUG-ACUCAAG-AACGAA-
NC_030299.1/87073-87026   AAGAGCCCC---GAG----CCA-AU-AAAU-A---CUG----AGAGG-A-UUG-ACUCGAG-AACAAAU
NC_037880.1/82165-82118   AAGAGCCUU---GGG----CCA-AU-AAAAGA---CUG----AGAAG-A-UUG-ACUCAAG-AAUAAA-
NC_043819.1/85646-85601   -GGAGCCUC---GAG----CCA-AU-AAAG-A---CUG----AUAAA-A-UUG-GCUCAAG-AAAAAA-
NC_039728.1/85464-85418   AAGAGCCCU---GAG----UCA-GU-AAAA-A---CUG----AGAAG-G-UUG-ACUCAAG-ACCAAA-
NC_028009.1/81946-81899   AAGAGCUUG---GGG----CCA-AU-AAAG-A---CUG----AGAAA-G-UUG-ACUCGAG-AACAAAU
NC_042277.1/1999-2046     AAGAGCUUG---GAG----CCA-AU-AAAG-A---CUA----AGAAG-G-UUG-GCUCAGG-AACAAAU
NC_037458.1/82837-82791   AAGAGCUUC---GAG----CCA-AU-AAAG-A---CUA----AAAAG-G-UUG-ACUCAAG-AAUAAA-
NC_036073.1/79372-79325   AAGAGCUUC---GGG----CCA-AU-AAAG-A---CUG----AGAAG-A-UUG-ACUCACG-AACAAAU
NC_039426.1/74340-74295   AAGAGCCUC---GAG----UCA-AU-AAAG-A---CUG----AGAAG-A-UUG-ACUCAAG-AUAAA--
NC_031874.1/79971-79925   AAGAGCUUC---GAG----UCA-AU-AAAG-A---CUA----ACAAA-G-UUG-ACUCAAG-AAUAAA-
NC_042719.1/84837-84792   -AAAGUCUC---GAG----UCA-AU-AAAG-A---CUA----AGAAG-A-UUG-ACUCAAG-AAAAAA-
NC_033337.1/18815-18861   AAGAGCUUC---GAG----CCA-AU-CAAG-A---CUG----AGAAG-A-UUG-ACUCAAG-AAAAAA-
NC_035873.1/78912-78871   ------CUA---GAG----UCA-AU-AAAG-A---CUG----AGAAA-A-UUG-ACUCAGA-AACAAAU
NC_043792.1/83498-83453   -AAAGCCCC---GAG----CCA-AU-AAAG-A---CUG----AGAAG-A-UUG-ACUCAAG-AAAAAA-
NC_036095.1/170253-170299 AAGAGCUUG---GAG----CCA-AU-CAAG-A---CUG----AGAGG-A-UUG-ACUCAAA-AACUAA-
NC_039762.1/81924-81878   AAGAGCUUA---GGG----CCA-AU-AAAG-A---CUA----AGAGG-G-UUG-ACUCAAA-AAGAAA-
NC_044117.1/84215-84169   AAGAGCAUU---GGG----UCA-AU-AAAA-A---CUA----AGAAG-G-UUG-AUUCAAG-AAAAAA-
NC_036744.1/85546-85500   AAGAGCCCC---GAG----UCA-AU-AAAA-A---CUG----AGAAG-G-UUG-ACUCAAG-AAAAAA-
NC_043827.1/85279-85233   AAGAGCCUC---GAG----CCA-AU-AAAG-A---CUG----AUAAA-A-UUG-GUUCAAG-AAAAAA-
NC_040943.1/82935-82890   -AGAGCUUC---GAG----CCA-AU-AAAG-A---CUA----AGAAG-G-UUG-GCUCAAG-AAAAAA-
NC_041270.1/82546-82501   -AGAGCUUC---GAG----CCA-AU-AAAG-A---CUA----AGAAG-G-UUG-GCUCAAG-AAAAAA-
NC_041135.1/86267-86220   AAGAGUCUC---GAG----CCA-AU-AAAG-A---CUG----AUAAG-A-UUG-ACUCACG-AACAAAU
NC_037984.1/77776-77730   AAGAGCUUC---GAG----CCAAAU-AAAG-A---CUU----AGAAA-A-UUG-ACUCAAG-AACAA--
NC_029719.2/62735-62780   AAGAGCUUC---GAG----CCA-AU-AAAG-A---CUA----AGGGG-A-UUG-ACUCAAA-AUUGA--
NC_034774.1/83011-82965   AAGAGCCAU---GAG----UCA-AU-AAAA-A---CUG----AGAAG-G-UUG-AUUCAAG-AAAAAA-
NC_030755.1/81780-81734   AAGAGCUUC---GAG----UUA-AU-AAAG-A---CUA----AGAAG-G-UUG-ACUCAAG-AAUAAA-
NC_035875.1/82346-82299   AAGAGCUUC---GAG----CCA-AUUAAAG-A---CUA----AGAAU-A-UUG-ACUCAAG-AACUAA-
NC_034742.1/81738-81692   AAGAGCCAC---GAG----UCA-AU-AAAA-A---CUA----AGAAG-G-UUG-AUUCAAG-AAAAAA-
NC_036810.2/82071-82024   AAGAGCUUC---GAG----CCA-AUUAAAG-A---CUA----AGAAU-A-UUG-ACUCAAU-AACUAA-
NC_041209.1/83343-83301   AAGAGCCCC---GAG----CCA-AU-AAAG-A---CUG----AGAAG-G-UUG-ACUCAAA-AA-----
NC_041161.1/80895-80849   AAGAGCUUC---GAG----UCA-AU-AAAG-A---CUA----AGAAG-G-UUG-ACUCGAG-AAUAAA-
NC_039740.1/81691-81650   AAGAGCCUC---GAG----UCA-AU-AAAG-A---CUG----AGAAG-A-UUG-ACUCAAG-C------
NC_031442.1/31657-31615   AAGAGCUUA---GAG----CCA-AU-AAAG-A---CUG----AGAAG-G-UUG-ACUCAAA-AA-----
NC_035370.1/80411-80366   AAGAGCUUU---GAG----UCA-AU-AAAG-A---CUG----AGAAG-A-UUG-ACUCACG-UACAA--
NC_043796.1/79566-79522   AAGAGCCGA---GAG----CCA-AU-AAAG-A---CUA----AGAAG-G-UUG-GCUCAAA-ACAA---
NC_035383.1/80751-80706   AAGAGCUUC---GAG----UCA-AU-AAAG-A---CUA----AGAAG-A-UUG-ACUCACG-CACAA--
NC_015996.1/85825-85779   AAGAGCCCC---GAG----CCA-AU-AAAG-A---CUG----AGAAG-G-UUG-ACUCAAG-AAUCAA-
NC_036961.1/84147-84101   AAGAGCAUU---GGG----UCA-AU-AAAA-A---CUA----AGAAG-G-UUG-AUUCAAG-AAAAAA-
NC_036074.1/81099-81055   --GAGCUUC---GAG----CCA-AU-AAAG-A---CUG----AGAAG-A-UUG-ACUCAAG-ACGAAA-
NC_031344.1/79798-79752   AAGAGCUUC---GAG----UCA-AU-AAAG-A---CUA----AGAAG-G-UUG-ACUCACG-AAUAAA-
NC_033365.1/80682-80637   AAGAGCUUU---GAG----UCA-AU-AAAG-A---CUG----AGAAG-A-UUG-ACUCACG-CACAA--
NC_035241.1/22572-22618   AAGAGCCUG---GGG----UUA-AU-AAAG-A---CUA----AGAAG-G-UUG-ACUCAAG-AAUAAA-
NC_038165.1/80472-80426   AAGAGCUUC---GAG----UCA-AU-AAAG-A---CUA----AGAAG-G-UUG-ACUCCAG-AAUAAA-
NC_037079.1/77865-77819   AAGAGCUUA---GGG----CCA-AU-AAAG-A---CUA----AGAAG-A-UUG-ACUCAUG-AUUAAA-
NC_041637.1/88141-88094   AAGAGCCCC---GAG----UCA-AU-AAAG-A---CUG----AGAGU-A-UUG-AUUCAAG-AACAAAU
NC_035506.1/81847-81801   AAGAGCCUC---GGG----UUA-AU-AGAA-A---CUG----AGAAA-A-UUG-ACUCGGG-AACAAA-
NC_035361.1/80357-80312   AAGAGCUUC---GAG----UCA-AU-AAAG-A---CUG----AGAAG-A-UUG-ACUCACA-CACAA--
NC_023132.1/30140-30098   AAGAGCUUA---GAG----CCA-AU-CAAG-A---CUA----AGAAG-G-UUG-ACUCAAA-AA-----
NC_031434.1/81033-80987   AAGAGCUUC---GAG----CCA-AU-UAAG-A---CUA----AGAAG-G-UUG-ACUCAAG-ACUAAA-
NC_043801.1/97025-96978   AAGAGCCUC---GAG----CCA-AU-AAAG-A---CUG----AGAAAGA-UUG-ACUCAAG-AAAAAA-
NC_039162.1/80317-80272   --GAGCCUC---GGG----UUA-AU-AUAA-A---CUA----AGAAA-A-UUA-ACUCAGG-AACAAAU
NC_041278.1/81144-81101   -AGAGCUUA---GAG----CCA-AU-AAAG-A---CUA----AGAAG-G-UUG-ACUCAAU-CAAA---
NC_035729.1/81264-81218   AAGAGCUCC---GAG----CCA-AU-AAAG-A---CUA----AGAAG-G-UUG-UCUCCAA-AAUAAA-
NC_044084.1/79332-79285   AAGAGCCCA---GAG----UUA-AU-AGAA-A---CUG----AGAAG-A-UUG-ACUCGGA-AACAAAU
NC_039731.1/83857-83811   AAGAGCCCC---GAG----UCA-AU-AAAA-A---CUG----AGAGG-A-UUG-ACUCAAG-ACCCAA-
NC_042408.1/86041-85996   -AUAGUCUC---GAG----UCA-AU-AAAG-A---CUA----GGAAG-A-UUG-ACUCAAG-AAAAAA-
NC_037765.1/154911-154957 AAGAGCCCC---GAG----UCA-AU-AAAA-A---CUG----AGAAG-G-UUG-GCUCAAG-AAAAAA-
NC_031886.1/82415-82369   AAGAGUCCC---GAG----CCA-AU-UAAG-A---CUG----AGAAG-A-UUG-ACUCAAG-AAAAAA-
NC_034691.1/87067-87020   AAGAGCUUG---GAG----UCA-AU-AAAG-A---CUA----AGAGG-G-UUG-ACUCAGG-AACAAAU
NC_026565.1/85555-85509   AAGAGCCUU---GAG----UCA-AU-AGAG-A---CUG----AGGAG-A-UUG-ACUCGGA-AACGAA-
NC_045064.1/87158-87111   AAGAGCUUC---GGG----CCA-AU-AAAG-A---CUG----AGAGG-G-UUG-ACUCAAG-AACAAAU
NC_025288.1/86061-86014   AAGAGCCUC---GAG----UCA-AU-AAAG-A---CUG----GGGAG-A-UUG-ACUCAGG-AACAAAU
NC_041536.1/85452-85405   AAGAGCAUC---GAG----UCA-AU-AAAG-A---CUG----AGAAG-A-UUG-AUUCAGG-AACAAAU
NC_035581.1/18455-18498   --GAGACUA---GAG----GCA-GU-AAAG-A---CUA----AGACA-A-UUG-ACUCAAG-AACAA--
NC_040959.1/84880-84833   AAGAGCUUC---GGG----CCA-AU-AAAU-A---CUG----AGAGG-G-UUG-ACUCAAG-AACAAAU
NC_029813.1/82547-82500   AAGAGCCUU---GAG----UUA-AU-AAAA-A---CUG----AGGAG-A-UUA-ACUUAGG-AACAAAU
NC_015605.1/89699-89652   AAGAGCCAC---GAG----UCA-AU-AAAG-A---CUG----AGGAG-A-UUG-ACUCAGG-AACAAAU
NC_035584.1/16607-16651   --GAGACUC---GAG----ACA-GU-AAAG-A---CUA----AGACA-A-UUG-ACUCAAG-AAUAAA-
NC_037762.1/84406-84360   AAGAGCCGC---GAG----UCA-AU-AAAA-A---CUG----AGAAG-G-UUG-GCUCAAG-AAAAAA-
NC_038153.1/10715-10761   AAGAGCCUU---GAA----UCA-AU-AAAG-A---CUG----AGAAG-A-UUG-AUUCAAG-AGAAAA-
NC_035941.1/85104-85057   AAGAGCAUC---GAG----UCA-AU-AAAG-A---CUG----AGGAG-A-UUG-ACUCAGG-AACAAAU
NC_029704.1/4660-4704     --GAGACUC---GAG----ACA-GU-AAAG-A---CUA----AGACA-A-UUG-ACUCAAU-AAUAAA-
NC_029429.1/88438-88391   AAGAGCAUC---GAG----UCA-AU-AAAG-A---CUG----AGUAG-A-UUG-ACUCAGG-AACAAAU
NC_037764.1/82860-82814   AAGAGCCAC---GAG----UCA-AU-AAAA-A---CUG----AGAAG-G-UUG-GCUCAAG-AAAAAA-
NC_023131.1/18697-18652   -AAAGCUUC---GGG----CCA-AU-AAAG-A---CUA----AUAAG-G-UUG-ACUCAAA-AAUAAA-
NC_037832.1/81136-81092   -AGAGCUUC---GAG----UCA-AU-AAAG-A---CUG----AGUAG-A-UUG-ACUCAGA-AACAA--
NC_045071.1/86942-86896   AAGAGCCCC---GAG----UCA-AU-AAAA-A---CUG----AGAAG-G-UUG-AUUCAAG-AAAAAA-
NC_002202.1/80681-80634   AAGAGCUUC---GAG----CCA-AU-AACG-A---CUA----AGAGG-G-UUG-UCUCAAG-AACAAAU
NC_041265.1/82965-82920   -AGAGCUUC---GAG----CCA-AU-AAAG-A---CUA----AGAAG-G-UUG-GUUCAAG-AAAAAA-
NC_036152.1/87645-87602   -GGAGCCUU---GAG----UCA-AU-AAAG-A---CUG----AGAAG-A-UUG-ACUCUGG-AACG---
NC_025651.1/60045-60004   AAGAGCUUC---GAG----CCA-AU-AAAG-A---CUA----AAAAG-G-UUG-ACUCAAA-A------
NC_037763.1/62881-62927   AAGAGCCCC---GAG----UCA-AU-AAAA-A---CUG----AGAAG-G-UUG-GCUCAAG-AAAAAA-
NC_042688.1/83491-83445   AAGAGCCGC---GAG----UCA-AU-AAAA-A---CUG----AGAAG-G-UUG-AUUCAAG-AAAAAA-
NC_035367.1/80570-80528   AAGAGCUUU---GAG----UCA-AU-AAAG-A---CUG----AGAAG-A-UUG-ACUCACG-UA-----
NC_044114.1/80011-79965   AAGAGCUCU---GAA----UCA-AU-AAAA-A---CUG----AGAAG-A-UUG-AUUCAAG-AAAAAA-
NC_036081.1/79342-79297   AAGAGCUUC---GAG----CCA-AU-AAAG-A---CUG----AGAGG-A-UUG-ACUCAUG-AAAAA--
NC_042933.1/158715-158764 -AGAGCUUC---GAGCCAGCCA-AU-AAAG-A---CUA----AGAAG-G-UUG-ACUCAAG-AAUAAA-
NC_031441.1/32775-32734   -AGGGCUUA---GAG----CCA-AU-AAAG-A---CUG----AGAAG-G-UUG-ACUCAAA-AA-----
NC_035381.1/80712-80669   --GAGCUUU---GAG----UCA-AU-AAAG-A---CUG----AGAAG-A-UUG-ACUCACG-CACAA--
NC_021645.1/81782-81737   AAGAGCUCU---GAA----UCA-AU-AAAA-A---CUA----AGAAU-A-UUG-AUUCACG-AAAAA--
NC_035371.1/80513-80468   AAGAGCUUC---GAG----UCA-AU-AAAG-A---CUG----AGAAG-A-UUG-ACUCAUG-CACAA--
NC_039704.1/83289-83245   AAGAGCCCC---GAG----UCA-AU-AAAG-A---CUG----AGAGG-G-UUG-ACUCAAA-AACG---
NC_035358.1/80629-80584   AAGAGCUUC---GAG----UCA-AU-AAAG-A---CUG----AGAAG-A-UUG-ACUCACG-UACAA--
NC_044116.1/83889-83843   AAGAGCUCU---GAA----UCA-AU-AAAA-A---CUG----AGAAU-A-UUG-AUUCAAG-AAAAAA-
NC_044113.1/81056-81010   AAGAGCUCU---GAA----UCA-AU-AAAA-A---CUG----AGAAG-A-UUG-AUUCAAG-AAAAAA-
NC_013991.2/84413-84367   AAGAGCCUC---GGG----UUA-AU-AAAA-A---CUG----AGAAG-A-UUG-ACUCGGG-AACGAA-
NC_036154.1/84340-84294   AAGAGCCUC---GAG----UUA-AU-AAAA-A---CUG----AGGAG-A-UUG-ACUCGGG-AACUAA-
NC_035769.1/81781-81736   AAGAGCUUC---GAG----UCA-AU-AAAG-A---CUG----AGAAG-A-UUG-ACUCACG-CACAA--
NC_044073.1/80155-80109   AAGAGCUCC---GAG----CCA-AU-AAAG-A---CUA----AGAGG-G-UUG-UCUCAAG-AAUAAA-
NC_029969.1/84378-84332   AAGAGCCUC---GGG----UUA-AU-AAAA-A---CUG----AGGAG-A-UUG-ACUCGAG-AACGAA-
NC_042718.1/89550-89505   AAGAGCCUC---GGG----CCA-AU-AAAG-A---UUG----AGAAG-G-UUG-ACUCAAG-AAAUA--
NC_042272.1/85866-85820   AAGAGCUUG---GAG----UCA-AU-AAAG-A---CUA----AGAGG-G-UUG-ACUCAGG-AAUAAA-
NC_042819.1/90659-90610   AAGAGCCUC---GGG----CCA-AU-AAAA-AAGAUUG----AGAAG-G-UUG-ACUCAAA-AACGAA-
NC_035379.1/80870-80825   AAGAGCUUC---GAG----UCA-AU-ACAG-A---CUG----AGAAG-A-UUG-ACUCAAG-CACAA--
NC_040164.1/84768-84722   AAGAGCCUC---GGG----UUA-AU-AGAA-A---CUG----AGAAG-A-UUG-ACUCGGG-AACAAA-
NC_042693.1/80965-80919   AAGAGCUCU---GAA----UCA-AU-AAAA-A---CUG----AGAAG-A-UUG-AUUCAAG-AAAAAA-
NC_043828.1/156903-156950 AAGAGCGCC---GAG----UCA-AU-AAAG-A---CUG----AGAAG-A-UUG-AUUCAGG-AACAAAU
NC_044889.1/85090-85043   AAGAGCCCC---GAG----UCA-AU-AAAG-A---CUG----AGGAG-A-UUG-GCUCAGG-AACAAAU
NC_009598.1/85013-84967   AAGAGCCUU---GAG----UCA-AU-AGAG-A---CUG----AGGAG-A-UUG-ACUCGGG-AACGAA-
NC_037081.1/77967-77921   AAGAGCUUA---GGG----ACA-AU-AAAG-A---CUA----AGAAG-A-UUG-ACUCAUG-AUUAAA-
NC_041532.1/83110-83063   AAGAGCAUC---GAG----UCA-AU-AAAG-A---CUG----AGGAG-A-UUG-AUUCAGG-AACAAAU
NC_024936.1/81034-80988   AAGAGCCUC---GGG----UUA-AU-ACAG-A---CUG----AGUAG-A-UUG-ACUCAAA-AACGAA-
NC_036969.1/81613-81566   AAGAGCUUG---GGG----UCA-AU-AUAG-A---CUG----AGAAA-G-UUG-ACUCGAG-AACAAAU
NC_039825.1/84777-84731   AAGAGCCUC---GGG----UUA-AU-CAAA-A---CUG----AGAAG-A-UUG-ACUCGGG-AACAAA-
NC_008456.1/86553-86507   AAGAGCCUC---GAG----UCA-AU-AGAG-A---CUG----AGGAG-A-UUG-ACUCGGG-AACAAA-
NC_041533.1/86366-86320   AAGAGCAUC---GAG----UCA-AU-AAAG-A---CUG----AGAAG-A-UUG-AUUCAGG-AAAAAA-
NC_039726.1/84184-84137   AAGAGCCAC---GGG----UCA-AU-AAAG-A---CUG----AGAGG-G-UUG-ACUCAAG-AACAAAU
NC_035569.1/86517-86470   AAGAGCCCC---GAA----UCA-AU-AAAG-A---CUG----AGAGU-A-UUG-AUUCAAG-AACAAAU
NC_039160.1/84052-84006   AAGAGCACC---GAG----UCA-AU-AAAA-A---CUG----AGAAG-G-UUG-AUUCAAG-AAAAAA-
NC_041540.1/82772-82726   AAGAGCAUC---GAG----UCA-AU-AAAG-A---CUG----AGGAG-A-UUG-AUUCAAG-AAAAAA-
NC_035583.1/16935-16980   -AGGGACUC---GAG----ACA-GU-AAAG-A---CUA----AGAAA-G-CUG-ACUCAAU-AAUAAA-
NC_039625.1/81873-81829   -AGAGCUUC---GAG----UCA-AU-AAAG-A---CUG----AGUAG-A-UUG-ACUCAGG-AACAA--
NC_043927.1/83607-83560   AAGAGCACC---GGG----CCA-AU-AAAG-A---CUG----AGGAA-A-UUG-GCUCAGG-AACAAAU
NC_036970.1/82556-82509   AAGAGCUUG---GGG----UCA-AU-ACAG-A---CUG----AGAAA-G-UUG-ACUCGAG-AACAAAU
NC_008336.1/83470-83423   AAGAGCACA---GAG----UCA-AU-AAAG-A---CUG----AGGAA-A-UUG-GCUCAGG-AACAAAU
NC_041455.1/87292-87249   -GGAGCCUU---GAG----UCA-AU-AGAG-A---CUG----AGAAG-A-UUG-ACUCUGG-AACG---
NC_041178.1/83249-83206   AAGAGCCUC---GAG----CCA-AUUAAAG-A---CUG----AGAAG-G-UUG-ACUCAAA-AA-----
NC_016921.1/82980-82939   AAGAGACCC---GAG----CCA-AU-AAAG-A---CUG----AGAAG-G-UUG-ACUCAAA-A------
NC_037358.1/83948-83902   AAGAGCACC---GAG----UCA-AU-AAAA-A---CUG----AGAAG-G-UUG-AUUCAAG-AAAAAA-
NC_030329.1/81367-81322   AAGAGCUCU---GAA----UCA-AU-AAAA-A---CUG----AGAAU-A-UUG-AUUCACG-AAAAA--
NC_026681.1/80476-80430   AAGAGCCAA---GAA----UCA-AU-AAAA-A---CUG----AGAAG-A-UUG-AUUCAAG-AAAAAA-
NC_035391.1/79978-79935   --GAGCUUC---GAG----UCA-AU-AAAG-A---CUG----AGAAG-A-UUG-ACUCACG-CACAA--
NC_035357.1/81782-81737   AAGAGCUUC---GAG----UCA-AU-AAAG-A---CUG----AGAAG-A-UUG-AUUCACG-CACAA--
NC_020366.1/84729-84683   AAGAGCUUC---GGG----UUA-AU-AAAA-A---CUG----AGGAG-A-UUG-ACUCGAG-AACGAA-
NC_035377.1/80554-80510   AAGAGCUUC---GAG----UCA-AU-AAAG-A---CUG----AGAAG-A-UUG-ACUCGCG-CACA---
NC_042700.1/82292-82247   AAGAGCUCU---GAA----UCA-AU-AAAA-A---CUG----AGAAU-A-UUG-AUUCACG-AAAAA--
NC_039161.1/83903-83858   AAGAGCACC---GAG----UCA-AU-AAAA-A---CUG----AGAAG-G-UUG-AUUCAAG-AAAAG--
NC_041442.1/185524-185570 AAGAGCUUC---GAG----UCA-AU-AGAG-A---CUG----AGGAA-A-UUG-ACUUGGG-AACAAA-
NC_042225.1/108984-108938 AAGAGCCUC---GAG----UCA-AU-AGAG-A---CUG----AGAAG-A-UUG-ACUUGGG-AACGAA-
NC_038119.1/135543-135593 AAGAGCCUC---GAG----CCA-AU-AAAG-A---CUAAUUAAUAAC-A-UUG-GCUCAAG-AAAAAA-
NC_039677.1/159307-159353 AAGAGCGCC---GAG----UCA-AU-AAAG-A---CUG----AGAAG-A-UUG-GCUCAGA-AAUCAA-
NC_041478.1/80799-80752   AAGAGCACC---GAG----UCA-AU-AAAG-A---UUG----AGGAA-A-UUG-AUUCAGG-AACAAAU
NC_035359.1/74370-74325   AAGAGCUUC---GAG----UCA-AU-AAAG-A---CUG----AGAAG-A-UUG-UCUCACG-CACAA--
NC_026103.1/82745-82698   AAGAGCACC---GAG----UCA-AU-AAAG-A---CUG----AGGAG-A-UUG-AUUCAGG-AACAAAU
NC_029432.1/86614-86570   AAGAGCGCC---GAG----UCA-AU-AAAG-A---CUG----AUAAA-A-UUG-ACUCAGG-AAAA---
NC_041541.1/82691-82644   AAGAGCACC---GAG----UCA-AU-AAAG-A---CUG----AGUAG-A-UUG-AUUCAGG-AACAAAU
NC_022457.1/155160-155207 AAGAGCGCC---GAG----UCA-AU-AAAG-A---UUG----GGAAU-A-UUG-GCUCAGA-AACAAAU
NC_035360.1/75062-75017   AAGAGCUUC---GAG----GCA-AU-AAAG-A---CUG----AGAAU-A-UUG-UCUCAUG-CACAA--
NC_039623.1/86427-86382   AAGAGCACC---GAG----UCA-AU-AAAG-A---CUG----AGUAG-A-UUG-ACUCAGG-AACAA--
NC_029428.1/84865-84818   AAGAGCCCC---GAG----UCA-AU-AAAG-A---CUG----GGGAG-A-UUG-GCUCAGG-AACAAAU
NC_037759.1/82456-82409   AAGAGCGUC---GAG----UCA-AU-AAGG-A---CUG----AGGAG-A-UUG-AUUCAGG-AACAAAU
NC_037908.1/85028-84981   AAGAGCACC---GAG----UCA-AU-AAAG-A---CUG----AGGAG-A-UUG-GCUCAGG-AACAAAU
NC_023236.1/86010-85965   AAGAGCCUC---GAG----UCA-AU-AGAG-A---CUG----AGGAG-A-UUG-ACUUAGG-AACGA--
NC_041537.1/84996-84950   AAGAGCAUC---GAG----UCA-AU-AAAG-A---CUG----AGUAG-A-UUG-AUUCAUU-AAAAAA-
NC_042220.1/87535-87490   AAGAGCGCC---GAG----CCA-AU-AAAG-A---CUG----AGGAG-A-UUG-GCUCAGG-AACAA--
NC_036742.1/86016-85971   AAGAGCCCC---GAG----UCA-AU-AA-A-A---CUG----AGAAG-G-UUG-ACUCAAG-AAAAAA-
NC_042371.1/86830-86784   AAGAGCGUC---GAG----UCA-AU-AAAG-A---CUG----AGGGG-A-UUG-ACUCAGU-AAAAAA-
NC_033376.1/74050-74009   AAGAGCUUC---GAG----UCA-AU-AAAG-A---CUG----AGAAG-A-UUG-UCUCACG-C------
NC_036487.1/80589-80543   AAGAGCCAA---GAA----UCA-AU-AAAA-A---CUG----AGAAG-G-UUG-AUUCAAG-AAAAAA-
NC_005086.1/88890-88844   AAGAGCAUU---GAG----UUG-AU-ACAG-A---CUG----AGAAG-A-UUG-ACUCGGG-AACAAA-
NC_042798.1/82557-82510   AAGAGCUUA---GAG----CCA-AA-AAUG-A---CUA----AGGGG-U-UUG-GCUCAAG-AACAAAU
NC_002694.1/80156-80111   AAGAGCUUC---GAG----UCA-A--AAAA-A---CUG----AGAAG-U-UUG-AUUCAAA-AAAAAA-
NC_041542.1/82912-82867   AAGAGCACC---GAG----UCA-AU-AAAG-A---CUG----AGGAG-A-UUG-AUUCAGG-AACAA--
NC_038103.1/80371-80328   AAGAGCAUC---GAG----UCA-AU-AAAG-A---CUG----AGGAG-A-UUG-ACUUAGG-AAC----
NC_035393.1/80832-80789   --GAGCUUC---GAG----UCA-AU-AAAG-A---CUG----AGACG-A-UUG-ACUCAUG-CACAA--
NC_012615.1/86343-86300   AAGAGCAUC---GAG----UCA-AU-AAAG-A---CUG----AGGAG-A-UUG-AUUCAGG-AAC----
NC_030504.1/85741-85695   AAGAGCCUC---GAG----UCA-AU-AUAG-A---CUG----AGGAG-A-UUG-ACUUGGG-AACGAA-
NC_037766.1/84502-84457   AAGAGCCAC---GAG----UCA-AU-AA-A-A---CUG----AGAAG-G-UUG-GCUCAAG-AAAAAA-
NC_036003.1/83388-83342   AAGAGCCUC---GAG----UCA-AU-AGAG-A---CUG----AGGAG-A-UUG-GCUCGGG-AACGAA-
NC_041475.1/87010-86968   AAGAGCAUC---GAG----UCA-AU-AAAG-A---CUG----AGGAG-A-UUG-AUUCAGG-AA-----
NC_037145.1/84269-84223   AAGAGCCUC---GAG----UCG-AU-CGAG-A---CUG----AGGAG-A-UUG-ACUCAGG-AACAGA-
NC_031446.1/84837-84793   -AGAGUACC---GAG----UCA-AU-AAAG-A---CUG----AGUAG-A-UUG-AUUCAGG-AACAA--
NC_038094.1/84278-84233   AAGAGCAUC---AAG----UCA-AU-AAAG-A---CUG----AGUAG-A-UUG-AUUUAGG-AACAA--
NC_041534.1/83817-83772   AAGAGCAUC---AAG----UCA-AU-AAAG-A---CUG----AGCAG-A-UUG-AUUUAGG-AACAA--
NC_042743.1/83471-83425   AAGAGCCUC---GGG----UCA-AU-AGAG-A---CUG----AGGAG-A-UUG-ACCCGGG-AACGAA-
NC_041419.1/82265-82220   AAGAGCCGC---GAA----UCA-AU-AA-A-A---CUG----AGAAG-G-UUG-AUUCAAC-AAAAAA-
#=GC SS_cons              ::::::<<-...<<<....<<<.<<.____._...___...._____.>.>>>.>>>>->>.::::::.
#=GC RF                   AAGAGCcuC...GAG....uCA.AU.AAAG.A...CUG....AGAAG.A.UUG.aCUCAag.AAcAAA.
//
