INFERNAL1/a [1.1.4 | Dec 2020] NAME Plastid-rpoB ACC RF04332 DESC Plastid-rpoB 5UTR RNA STATES 151 NODES 45 CLEN 49 W 71 ALPH RNA RF no CONS yes MAP yes DATE Wed Sep 3 00:39:12 2025 COM [1] /hps/software/users/agb/rfam/bin/cmbuild -F CM SEED COM [2] /hps/software/users/agb/rfam/bin/cmcalibrate --cpu 8 /nfs/production/agb/rfam/15.1/Chloroplasts/fixed/GOOD/NC_026779.1/CM PBEGIN 0.05 PEND 0.05 WBETA 1e-07 QDBBETA1 1e-07 QDBBETA2 1e-15 N2OMEGA 1.52588e-05 N3OMEGA 1.52588e-05 ELSELF -0.08926734 NSEQ 49 EFFN 4.405334 CKSUM 4098182340 NULL 0.000 0.000 0.000 0.000 GA 45.00 TC 45.10 NC 44.70 EFP7GF -12.2992 0.71935 ECMLC 0.61170 -6.67822 3.36352 1600000 558288 0.002149 ECMGC 0.39576 -18.53611 -1.98694 1600000 279565 0.001431 ECMLI 0.57406 -5.58173 4.31665 1600000 352345 0.003406 ECMGI 0.41553 -14.81103 0.28820 1600000 212265 0.001884 CM [ ROOT 0 ] - - - - - - S 0 -1 0 1 4 1 1 71 103 -7.716 -7.923 -0.499 -1.818 IL 1 1 2 1 4 1 12 74 105 -1.686 -2.369 -1.117 -4.855 0.000 0.000 0.000 0.000 IR 2 2 3 2 3 1 11 73 105 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 1 ] 1 - C - - - ML 3 2 3 5 3 1 11 71 103 -8.256 -0.017 -6.910 -2.457 1.771 -3.286 -1.730 D 4 2 3 5 3 0 6 70 101 -8.486 -0.992 -1.016 IL 5 5 3 5 3 1 10 72 104 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 2 ] 2 - U - - - ML 6 5 3 8 3 1 11 70 102 -8.511 -0.014 -7.165 -2.525 -2.349 -3.295 1.819 D 7 5 3 8 3 0 5 68 100 -7.649 -1.982 -0.431 IL 8 8 3 8 3 1 9 71 103 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 3 ] 3 - A - - - ML 9 8 3 11 3 1 10 69 101 -8.552 -0.014 -7.206 1.657 -2.059 -1.574 -1.890 D 10 8 3 11 3 0 4 68 99 -7.429 -1.388 -0.708 IL 11 11 3 11 3 1 9 70 102 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 4 ] 4 - U - - - ML 12 11 3 14 3 1 9 68 100 -8.613 -0.013 -7.267 -1.502 -1.445 -1.706 1.572 D 13 11 3 14 3 0 3 67 98 -7.010 -1.019 -1.004 IL 14 14 3 14 3 1 7 69 101 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 5 ] 5 - G - - - ML 15 14 3 17 3 1 8 67 99 -9.022 -0.012 -7.340 0.446 -2.247 1.084 -1.705 D 16 14 3 17 3 0 2 66 97 -5.797 -0.627 -1.580 IL 17 17 3 17 3 1 6 68 99 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 6 ] - 57 - A - - MR 18 17 3 20 5 1 8 66 98 -7.744 -0.025 -7.559 -7.772 -8.663 1.902 -3.801 -3.306 -3.484 D 19 17 3 20 5 0 0 65 96 -5.352 -0.707 -2.978 -4.409 -2.404 IR 20 20 3 20 5 1 4 66 98 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 7 ] 6 56 C G - - MP 21 20 3 25 6 2 9 65 97 -9.450 -9.390 -0.017 -8.166 -8.446 -8.841 -5.180 -5.238 -4.741 -1.370 -3.267 -5.049 3.605 -4.125 -4.793 -1.233 -5.015 -3.268 0.213 -5.159 0.374 -3.598 ML 22 20 3 25 6 1 2 64 95 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 23 20 3 25 6 1 2 63 95 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 24 20 3 25 6 0 0 60 92 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 25 25 5 25 6 1 3 65 96 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 26 26 6 26 5 1 4 64 96 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 8 ] 7 55 U A - - MP 27 26 6 31 6 2 8 63 95 -9.450 -9.390 -0.017 -8.166 -8.446 -8.841 -4.652 -4.669 -4.399 -0.893 -3.136 -4.849 1.207 -3.919 -4.424 -0.751 -4.744 -2.696 3.195 -4.734 1.424 -3.266 ML 28 26 6 31 6 1 2 62 93 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 29 26 6 31 6 1 2 61 93 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 30 26 6 31 6 0 0 58 90 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 31 31 5 31 6 1 3 63 94 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 32 32 6 32 5 1 3 62 94 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 9 ] 8 54 G C - - MP 33 32 6 37 6 2 7 61 93 -9.450 -9.390 -0.017 -8.166 -8.446 -8.841 -5.740 -3.625 -5.980 -0.504 -6.911 -5.158 -1.915 -6.344 -4.998 3.790 -5.281 -0.666 -2.202 -5.140 -4.021 -4.849 ML 34 32 6 37 6 1 2 60 91 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 35 32 6 37 6 1 2 59 91 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 36 32 6 37 6 0 0 57 88 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 37 37 5 37 6 1 3 61 92 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 38 38 6 38 5 1 3 60 92 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 10 ] 9 53 u g - - MP 39 38 6 43 6 2 6 59 91 -9.450 -9.390 -0.037 -8.166 -5.884 -8.841 -4.474 -4.500 -4.265 -0.741 -3.056 -4.749 1.806 -3.823 -4.286 -0.598 -4.629 -2.544 2.348 -4.577 2.424 -3.148 ML 40 38 6 43 6 1 2 58 89 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 41 38 6 43 6 1 2 57 89 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 42 38 6 43 6 0 0 55 86 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 43 43 5 43 6 1 2 59 90 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 44 44 6 44 5 1 3 59 90 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 11 ] 10 52 U A - - MP 45 44 6 49 6 2 5 57 89 -9.430 -9.369 -0.017 -8.146 -8.426 -8.821 -6.052 -5.898 -5.669 -2.119 -4.297 -6.059 0.029 -5.094 -5.663 -2.053 -5.949 -3.761 3.799 -6.097 -1.929 -4.179 ML 46 44 6 49 6 1 1 56 87 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 47 44 6 49 6 1 1 55 87 -7.258 -5.987 -1.896 -5.965 -0.649 -4.179 0.157 -0.718 0.491 -0.198 D 48 44 6 49 6 0 0 53 85 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 49 49 5 49 6 1 2 57 88 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 50 50 6 50 5 1 2 57 88 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 12 ] 11 51 C G - - MP 51 50 6 55 4 2 4 55 87 -7.676 -7.883 -0.032 -6.297 -5.183 -5.239 -4.744 -1.373 -3.273 -5.052 3.623 -4.135 -4.800 -1.234 -5.017 -3.268 0.203 -5.164 0.208 -3.605 ML 52 50 6 55 4 1 1 55 86 -3.758 -3.940 -0.507 -2.670 0.368 -0.385 -0.191 0.094 MR 53 50 6 55 4 1 1 54 85 -5.117 -4.146 -2.013 -0.584 0.157 -0.718 0.491 -0.198 D 54 50 6 55 4 0 0 53 84 -4.568 -4.250 -2.265 -0.520 IL 55 55 5 55 4 1 2 56 87 -1.686 -2.369 -1.117 -4.855 0.000 0.000 0.000 0.000 IR 56 56 6 56 3 1 1 55 87 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 13 ] 12 - C - - - ML 57 56 6 59 3 1 3 53 85 -8.651 -0.013 -7.305 -2.197 1.618 -3.082 -0.749 D 58 56 6 59 3 0 0 51 83 -6.661 -2.174 -0.380 IL 59 59 3 59 3 1 1 54 86 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 14 ] 13 - U - - - ML 60 59 3 62 3 1 2 52 84 -8.651 -0.013 -7.305 -0.834 -0.525 -1.914 1.310 D 61 59 3 62 3 0 0 50 82 -6.661 -2.174 -0.380 IL 62 62 3 62 3 1 1 53 85 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 15 ] 14 - G - - - ML 63 62 3 65 3 1 2 51 83 -8.651 -0.013 -7.305 -0.772 -2.136 1.447 -1.117 D 64 62 3 65 3 0 0 50 81 -6.661 -0.977 -1.053 IL 65 65 3 65 3 1 1 52 84 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 16 ] 15 - A - - - ML 66 65 3 68 3 1 2 50 82 -8.689 -0.012 -7.343 1.710 -2.447 -1.947 -1.808 D 67 65 3 68 3 0 0 48 80 -6.174 -1.687 -0.566 IL 68 68 3 68 3 1 1 51 83 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 17 ] 16 - U - - - ML 69 68 3 71 3 1 1 49 81 -8.689 -0.012 -7.343 -1.603 -1.285 -1.970 1.587 D 70 68 3 71 3 0 0 47 79 -6.174 -1.687 -0.566 IL 71 71 3 71 3 1 1 50 82 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 18 ] 17 - U - - - ML 72 71 3 74 3 1 1 48 80 -8.689 -0.012 -7.343 -2.244 -1.692 -2.993 1.746 D 73 71 3 74 3 0 0 46 78 -6.174 -1.687 -0.566 IL 74 74 3 74 3 1 1 49 81 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 19 ] 18 - a - - - ML 75 74 3 77 3 1 1 47 79 -8.689 -0.012 -7.343 0.688 0.499 -1.621 -0.620 D 76 74 3 77 3 0 0 45 77 -6.174 -1.687 -0.566 IL 77 77 3 77 3 1 1 48 80 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 20 ] 19 - U - - - ML 78 77 3 80 3 1 1 46 78 -8.689 -0.012 -7.343 -2.290 -1.775 -3.039 1.758 D 79 77 3 80 3 0 0 44 76 -6.174 -1.687 -0.566 IL 80 80 3 80 3 1 1 47 79 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 21 ] 20 - U - - - ML 81 80 3 83 3 1 1 45 77 -8.689 -0.012 -7.343 -2.853 -2.627 -3.629 1.856 D 82 80 3 83 3 0 0 43 75 -6.174 -1.687 -0.566 IL 83 83 3 83 3 1 1 46 78 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 22 ] 21 - C - - - ML 84 83 3 86 3 1 1 44 76 -8.689 -0.012 -7.343 -1.481 1.517 -2.649 -0.690 D 85 83 3 86 3 0 0 42 74 -6.174 -1.687 -0.566 IL 86 86 3 86 3 1 1 45 77 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 23 ] 22 - U - - - ML 87 86 3 89 3 1 1 43 75 -8.689 -0.012 -7.343 -2.327 -1.841 -3.078 1.767 D 88 86 3 89 3 0 0 41 73 -6.174 -1.687 -0.566 IL 89 89 3 89 3 1 1 44 76 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 24 ] 23 - G - - - ML 90 89 3 92 3 1 1 42 74 -8.689 -0.036 -5.506 -0.833 -1.956 1.483 -1.374 D 91 89 3 92 3 0 0 40 72 -6.174 -1.687 -0.566 IL 92 92 3 92 3 1 1 43 75 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 25 ] 24 - U - - - ML 93 92 3 95 3 1 1 41 73 -4.938 -0.121 -4.377 -2.289 -1.811 -3.039 1.761 D 94 92 3 95 3 0 0 38 70 -6.487 -1.168 -0.879 IL 95 95 3 95 3 1 1 46 78 -0.844 -1.289 -4.893 0.000 0.000 0.000 0.000 [ MATL 26 ] 31 - U - - - ML 96 95 3 98 3 1 1 32 51 -8.629 -0.046 -5.117 -1.348 0.352 -2.165 1.076 D 97 95 3 98 3 0 0 31 50 -6.879 -0.793 -1.270 IL 98 98 3 98 3 1 1 35 54 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 27 ] 32 - U - - - ML 99 98 3 101 3 1 1 31 50 -8.658 -0.013 -7.312 -2.796 -2.579 -3.572 1.850 D 100 98 3 101 3 0 0 30 49 -6.584 -1.056 -0.975 IL 101 101 3 101 3 1 1 34 53 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 28 ] 33 - U - - - ML 102 101 3 104 3 1 1 30 49 -8.689 -0.012 -7.343 -2.322 -1.833 -3.072 1.766 D 103 101 3 104 3 0 0 29 48 -6.174 -1.687 -0.566 IL 104 104 3 104 3 1 1 33 52 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 29 ] 34 - U - - - ML 105 104 3 107 3 1 1 29 48 -8.689 -0.012 -7.343 -2.853 -2.627 -3.629 1.856 D 106 104 3 107 3 0 0 28 47 -6.174 -1.687 -0.566 IL 107 107 3 107 3 1 1 32 51 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 30 ] 35 - A - - - ML 108 107 3 110 3 1 1 28 47 -8.689 -0.012 -7.343 1.560 -1.394 -1.567 -1.585 D 109 107 3 110 3 0 0 27 46 -6.174 -1.687 -0.566 IL 110 110 3 110 3 1 1 31 50 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 31 ] 36 - U - - - ML 111 110 3 113 3 1 1 27 45 -8.689 -0.012 -7.343 -2.853 -2.627 -3.629 1.856 D 112 110 3 113 3 0 0 26 45 -6.174 -1.687 -0.566 IL 113 113 3 113 3 1 1 30 49 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 32 ] 37 - C - - - ML 114 113 3 116 3 1 1 26 44 -8.689 -0.012 -7.343 -1.966 1.747 -3.290 -1.805 D 115 113 3 116 3 0 0 25 44 -6.174 -1.687 -0.566 IL 116 116 3 116 3 1 1 29 48 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 33 ] 38 - U - - - ML 117 116 3 119 3 1 1 25 43 -8.689 -0.012 -7.343 -1.905 -1.886 -2.277 1.703 D 118 116 3 119 3 0 0 24 43 -6.174 -1.687 -0.566 IL 119 119 3 119 3 1 1 27 46 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 34 ] 39 - C - - - ML 120 119 3 122 3 1 1 24 42 -8.689 -0.012 -7.343 -1.949 1.659 -3.015 -1.120 D 121 119 3 122 3 0 0 23 41 -6.174 -1.687 -0.566 IL 122 122 3 122 3 1 1 26 45 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 35 ] 40 - A - - - ML 123 122 3 125 3 1 1 22 41 -8.689 -0.012 -7.343 1.902 -3.801 -3.306 -3.484 D 124 122 3 125 3 0 0 21 40 -6.174 -1.687 -0.566 IL 125 125 3 125 3 1 1 25 44 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 36 ] 41 - U - - - ML 126 125 3 128 3 1 1 21 40 -4.243 -0.088 -7.343 -2.853 -2.627 -3.629 1.856 D 127 125 3 128 3 0 0 20 38 -6.174 -1.687 -0.566 IL 128 128 3 128 3 1 1 22 41 -1.697 -0.635 -4.397 0.000 0.000 0.000 0.000 [ MATL 37 ] 43 - U - - - ML 129 128 3 131 3 1 1 20 38 -8.689 -0.012 -7.343 -2.853 -2.627 -3.629 1.856 D 130 128 3 131 3 0 0 19 38 -6.174 -1.687 -0.566 IL 131 131 3 131 3 1 1 23 42 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 38 ] 44 - C - - - ML 132 131 3 134 3 1 1 19 37 -8.689 -0.012 -7.343 -2.976 1.815 -3.781 -1.824 D 133 131 3 134 3 0 0 18 37 -6.174 -1.687 -0.566 IL 134 134 3 134 3 1 1 22 41 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 39 ] 45 - A - - - ML 135 134 3 137 3 1 1 18 36 -8.689 -0.012 -7.343 1.902 -3.801 -3.306 -3.484 D 136 134 3 137 3 0 0 17 35 -6.174 -1.687 -0.566 IL 137 137 3 137 3 1 1 21 40 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 40 ] 46 - U - - - ML 138 137 3 140 3 1 1 16 34 -6.034 -0.031 -7.343 -2.853 -2.627 -3.629 1.856 D 139 137 3 140 3 0 0 15 34 -6.174 -1.687 -0.566 IL 140 140 3 140 3 1 1 19 37 -1.511 -0.749 -4.211 0.000 0.000 0.000 0.000 [ MATL 41 ] 48 - A - - - ML 141 140 3 143 3 1 1 14 33 -8.689 -0.012 -7.343 1.902 -3.801 -3.306 -3.484 D 142 140 3 143 3 0 0 15 33 -6.174 -1.687 -0.566 IL 143 143 3 143 3 1 1 19 37 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 42 ] 49 - G - - - ML 144 143 3 146 3 1 1 13 31 -8.689 -0.012 -7.343 -1.387 -3.316 1.753 -2.774 D 145 143 3 146 3 0 0 13 32 -6.174 -1.687 -0.566 IL 146 146 3 146 3 1 1 18 36 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 43 ] 50 - A - - - ML 147 146 3 149 2 1 1 1 1 * 0.000 1.902 -3.801 -3.306 -3.484 D 148 146 3 149 2 0 0 0 0 * 0.000 IL 149 149 3 149 2 1 1 13 28 -1.823 -0.479 0.000 0.000 0.000 0.000 [ END 44 ] - - - - - - E 150 149 3 -1 0 0 0 0 0 // HMMER3/f [3.3.2 | Nov 2020] NAME Plastid-rpoB ACC RF04332 DESC Plastid-rpoB 5UTR RNA LENG 49 MAXL 127 ALPH RNA RF no MM no CONS yes CS yes MAP yes DATE Wed Sep 3 00:39:12 2025 COM [1] /hps/software/users/agb/rfam/bin/cmbuild -F CM SEED COM [2] /hps/software/users/agb/rfam/bin/cmcalibrate --cpu 8 /nfs/production/agb/rfam/15.1/Chloroplasts/fixed/GOOD/NC_026779.1/CM NSEQ 49 EFFN 4.955627 CKSUM 4098182340 STATS LOCAL MSV -7.2839 0.71935 STATS LOCAL VITERBI -7.9848 0.71935 STATS LOCAL FORWARD -3.9216 0.71935 HMM A C G U m->m m->i m->d i->m i->i d->m d->d COMPO 1.42839 1.57252 1.80659 0.94528 1.38629 1.38629 1.38629 1.38629 0.34719 4.39084 1.26963 1.46634 0.26236 0.00000 * 1 3.26208 0.13394 3.83166 2.72756 1 C - - : 1.38629 1.38629 1.38629 1.38629 0.03447 4.07812 4.07812 1.46634 0.26236 0.64462 0.74415 2 3.28377 3.13927 3.82062 0.10838 2 U - - : 1.38629 1.38629 1.38629 1.38629 0.02858 4.26246 4.26246 1.46634 0.26236 1.39678 0.28421 3 0.22020 2.87313 2.52543 2.79529 3 A - - : 1.38629 1.38629 1.38629 1.38629 0.02773 4.29227 4.29227 1.46634 0.26236 0.90308 0.51973 4 2.52639 2.45818 2.61750 0.27250 4 U - - : 1.38629 1.38629 1.38629 1.38629 0.02652 4.33623 4.33623 1.46634 0.26236 0.57114 0.83214 5 1.07109 3.04785 0.61358 2.68098 5 G - - : 1.38629 1.38629 1.38629 1.38629 0.02547 4.37621 4.37621 1.46634 0.26236 0.65283 0.73516 6 3.56142 0.24427 3.38807 1.86723 6 C - - < 1.38629 1.38629 1.38629 1.38629 0.02509 4.39084 4.39084 1.46634 0.26236 1.09861 0.40547 7 3.27989 1.93224 3.09070 0.25867 7 U - - < 1.38629 1.38629 1.38629 1.38629 0.02509 4.39084 4.39084 1.46634 0.26236 1.09861 0.40547 8 3.03169 3.99529 0.09106 3.89235 8 G - - < 1.38629 1.38629 1.38629 1.38629 0.02509 4.39084 4.39084 1.46634 0.26236 1.09861 0.40547 9 3.16516 1.49986 2.97288 0.38057 9 U - - < 1.38629 1.38629 1.38629 1.38629 0.05337 4.39084 3.22949 1.46634 0.26236 1.09861 0.40547 10 4.10893 2.83303 3.97674 0.09872 10 U - - < 1.38629 1.38629 1.38629 1.38629 0.02580 4.36327 4.36327 1.46634 0.26236 1.64755 0.21384 11 3.54993 0.23317 3.38046 1.92948 11 C - - < 1.38629 1.38629 1.38629 1.38629 0.02580 4.36327 4.36327 1.46634 0.26236 1.64755 0.21384 12 3.03232 0.24412 3.64926 1.94918 12 C - - _ 1.38629 1.38629 1.38629 1.38629 0.02580 4.36327 4.36327 1.46634 0.26236 1.64755 0.21384 13 2.01082 1.76506 2.79057 0.45640 13 U - - _ 1.38629 1.38629 1.38629 1.38629 0.02580 4.36327 4.36327 1.46634 0.26236 1.64755 0.21384 14 1.96257 2.94277 0.36229 2.20088 14 G - - _ 1.38629 1.38629 1.38629 1.38629 0.02580 4.36327 4.36327 1.46634 0.26236 0.48620 0.95440 15 0.18586 3.16661 2.79979 2.70845 15 A - - _ 1.38629 1.38629 1.38629 1.38629 0.02509 4.39084 4.39084 1.46634 0.26236 1.09861 0.40547 16 2.59709 2.33079 2.81325 0.26360 16 U - - _ 1.38629 1.38629 1.38629 1.38629 0.02509 4.39084 4.39084 1.46634 0.26236 1.09861 0.40547 17 3.05524 2.61959 3.57378 0.16016 17 U - - _ 1.38629 1.38629 1.38629 1.38629 0.02509 4.39084 4.39084 1.46634 0.26236 1.09861 0.40547 18 0.89484 1.01737 2.58238 1.86957 18 a - - _ 1.38629 1.38629 1.38629 1.38629 0.02509 4.39084 4.39084 1.46634 0.26236 1.09861 0.40547 19 3.08770 2.68156 3.60685 0.15222 19 U - - _ 1.38629 1.38629 1.38629 1.38629 0.02509 4.39084 4.39084 1.46634 0.26236 1.09861 0.40547 20 3.51199 3.33527 4.05309 0.08644 20 U - - _ 1.38629 1.38629 1.38629 1.38629 0.02509 4.39084 4.39084 1.46634 0.26236 1.09861 0.40547 21 2.48280 0.31174 3.32638 1.90788 21 C - - _ 1.38629 1.38629 1.38629 1.38629 0.02509 4.39084 4.39084 1.46634 0.26236 1.09861 0.40547 22 3.11446 2.73067 3.63426 0.14616 22 U - - _ 1.38629 1.38629 1.38629 1.38629 0.02509 4.39084 4.39084 1.46634 0.26236 1.09861 0.40547 23 2.00495 2.79045 0.33920 2.39034 23 G - - _ 1.38629 1.38629 1.38629 1.38629 0.04205 4.39084 3.54774 1.46634 0.26236 1.09861 0.40547 24 3.08793 2.70994 3.60771 0.14995 24 U - - _ 1.38629 1.38629 1.38629 1.38629 0.10512 3.12753 2.88315 1.73611 0.19383 0.62098 0.77093 25 2.41319 1.12617 2.98558 0.62420 31 U - - _ 1.38629 1.38629 1.38629 1.38629 0.05035 4.34725 3.31978 1.46634 0.26236 0.37172 1.16972 26 3.47290 3.30146 4.01332 0.08985 32 U - - _ 1.38629 1.38629 1.38629 1.38629 0.02567 4.36836 4.36836 1.46634 0.26236 0.53989 0.87421 27 3.11093 2.72428 3.63063 0.14694 33 U - - _ 1.38629 1.38629 1.38629 1.38629 0.02509 4.39084 4.39084 1.46634 0.26236 1.09861 0.40547 28 3.51199 3.33527 4.05309 0.08644 34 U - - _ 1.38629 1.38629 1.38629 1.38629 0.02509 4.39084 4.39084 1.46634 0.26236 1.09861 0.40547 29 0.28550 2.37892 2.52780 2.57868 35 A - - _ 1.38629 1.38629 1.38629 1.38629 0.02509 4.39084 4.39084 1.46634 0.26236 1.09861 0.40547 30 3.51199 3.33527 4.05309 0.08644 36 U - - _ 1.38629 1.38629 1.38629 1.38629 0.02509 4.39084 4.39084 1.46634 0.26236 1.09861 0.40547 31 2.83339 0.15584 3.79868 2.76322 37 C - - _ 1.38629 1.38629 1.38629 1.38629 0.02509 4.39084 4.39084 1.46634 0.26236 1.09861 0.40547 32 2.81296 2.78478 3.03372 0.18622 38 U - - _ 1.38629 1.38629 1.38629 1.38629 0.02509 4.39084 4.39084 1.46634 0.26236 1.09861 0.40547 33 2.82944 0.21616 3.59027 2.22787 39 C - - _ 1.38629 1.38629 1.38629 1.38629 0.02509 4.39084 4.39084 1.46634 0.26236 1.09861 0.40547 34 0.05799 4.17230 3.82004 3.96360 40 A - - _ 1.38629 1.38629 1.38629 1.38629 0.02509 4.39084 4.39084 1.46634 0.26236 1.09861 0.40547 35 3.51199 3.33527 4.05309 0.08644 41 U - - _ 1.38629 1.38629 1.38629 1.38629 0.08006 2.74029 4.39084 0.34770 1.22522 1.09861 0.40547 36 3.51199 3.33527 4.05309 0.08644 43 U - - _ 1.38629 1.38629 1.38629 1.38629 0.02509 4.39084 4.39084 1.46634 0.26236 1.09861 0.40547 37 3.59607 0.11383 4.13976 2.74529 44 C - - _ 1.38629 1.38629 1.38629 1.38629 0.02509 4.39084 4.39084 1.46634 0.26236 1.09861 0.40547 38 0.05799 4.17230 3.82004 3.96360 45 A - - _ 1.38629 1.38629 1.38629 1.38629 0.02509 4.39084 4.39084 1.46634 0.26236 1.09861 0.40547 39 3.51199 3.33527 4.05309 0.08644 46 U - - _ 1.38629 1.38629 1.38629 1.38629 0.03881 3.66213 4.39084 0.78659 0.60770 1.09861 0.40547 40 0.05799 4.17230 3.82004 3.96360 48 A - - _ 1.38629 1.38629 1.38629 1.38629 0.02509 4.39084 4.39084 1.46634 0.26236 1.09861 0.40547 41 2.39739 3.79701 0.15776 3.42477 49 G - - _ 1.38629 1.38629 1.38629 1.38629 0.02509 4.39084 4.39084 1.46634 0.26236 1.09861 0.40547 42 0.05799 4.17230 3.82004 3.96360 50 A - - _ 1.38629 1.38629 1.38629 1.38629 0.02509 4.39084 4.39084 1.46634 0.26236 1.09861 0.40547 43 2.54152 3.50533 0.15866 3.27209 51 G - - > 1.38629 1.38629 1.38629 1.38629 0.02509 4.39084 4.39084 1.46634 0.26236 1.09861 0.40547 44 0.12336 4.07165 2.58871 3.73418 52 A - - > 1.38629 1.38629 1.38629 1.38629 0.02509 4.39084 4.39084 1.46634 0.26236 1.09861 0.40547 45 1.08708 3.13650 0.56908 2.93143 53 G - - > 1.38629 1.38629 1.38629 1.38629 0.02509 4.39084 4.39084 1.46634 0.26236 1.09861 0.40547 46 4.06521 0.12807 3.84806 2.50433 54 C - - > 1.38629 1.38629 1.38629 1.38629 0.02509 4.39084 4.39084 1.46634 0.26236 1.09861 0.40547 47 0.50662 3.25792 1.16676 3.04428 55 A - - > 1.38629 1.38629 1.38629 1.38629 0.02509 4.39084 4.39084 1.46634 0.26236 1.09861 0.40547 48 2.56708 3.55222 0.15234 3.32737 56 G - - > 1.38629 1.38629 1.38629 1.38629 0.02509 4.39084 4.39084 1.46634 0.26236 1.09861 0.40547 49 0.05799 4.17230 3.82004 3.96360 57 A - - : 1.38629 1.38629 1.38629 1.38629 0.19411 1.73481 * 0.13661 2.05816 0.00000 * //