INFERNAL1/a [1.1.5 | Sep 2023] NAME HCV_SL2531-SL2549 ACC RF04308 DESC Hepatitis C virus stem-loop SL2531 and SL2549AU STATES 225 NODES 61 CLEN 72 W 88 ALPH RNA RF no CONS yes MAP yes DATE Wed Jul 10 23:24:55 2024 COM [1] /hps/software/users/agb/rfam/bin/cmbuild -F CM SEED COM [2] /hps/software/users/agb/rfam/bin/cmcalibrate --cpu 8 /nfs/production/agb/rfam/15/HCV_SL2531_SL2549/CM PBEGIN 0.05 PEND 0.05 WBETA 1e-07 QDBBETA1 1e-07 QDBBETA2 1e-15 N2OMEGA 1.52588e-05 N3OMEGA 1.52588e-05 ELSELF -0.08926734 NSEQ 57 EFFN 5.075867 CKSUM 3826639606 NULL 0.000 0.000 0.000 0.000 GA 56.00 TC 56.40 NC 37.30 EFP7GF -12.0897 0.71889 ECMLC 0.60919 -8.87104 0.88522 1600000 457502 0.002623 ECMGC 0.36776 -20.83053 -6.42477 1600000 79962 0.005002 ECMLI 0.58822 -7.63316 2.00394 1600000 347613 0.003452 ECMGI 0.40772 -15.96729 -3.47609 1600000 65142 0.006140 CM [ ROOT 0 ] - - - - - - S 0 -1 0 1 4 1 1 88 107 -7.869 -8.076 -0.028 -6.490 IL 1 1 2 1 4 5 34 92 112 -1.686 -2.369 -1.117 -4.855 0.000 0.000 0.000 0.000 IR 2 2 3 2 3 4 34 91 111 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 1 ] 1 - U - - - ML 3 2 3 5 3 6 33 88 107 -8.836 -0.011 -7.490 -3.110 -2.850 -3.892 1.879 D 4 2 3 5 3 1 29 86 106 -6.174 -1.687 -0.566 IL 5 5 3 5 3 4 33 90 110 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 2 ] 2 - g - - - ML 6 5 3 8 3 5 33 87 106 -8.836 -0.011 -7.490 -0.221 0.032 0.240 -0.091 D 7 5 3 8 3 1 29 85 105 -6.174 -1.687 -0.566 IL 8 8 3 8 3 4 32 89 109 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 3 ] 3 - C - - - ML 9 8 3 11 3 5 32 86 105 -8.836 -0.011 -7.490 -1.858 1.348 -2.785 0.048 D 10 8 3 11 3 1 28 84 104 -6.174 -1.687 -0.566 IL 11 11 3 11 3 3 31 88 107 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 4 ] 4 - U - - - ML 12 11 3 14 3 4 31 84 104 -8.836 -0.011 -7.490 -3.110 -2.850 -3.892 1.879 D 13 11 3 14 3 0 28 83 103 -6.174 -1.687 -0.566 IL 14 14 3 14 3 3 31 87 106 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 5 ] 5 - g - - - ML 15 14 3 17 3 4 30 83 103 -9.183 -0.010 -7.501 -0.002 -0.946 0.611 -0.067 D 16 14 3 17 3 0 27 82 102 -5.620 -0.734 -1.403 IL 17 17 3 17 3 2 29 84 104 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 6 ] - 73 - G - - MR 18 17 3 20 3 3 29 82 102 -9.183 -0.010 -7.501 -1.445 -2.875 1.689 -1.883 D 19 17 3 20 3 0 26 81 100 -6.390 -1.568 -0.620 IR 20 20 3 20 3 2 29 83 103 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 7 ] - 72 - G - - MR 21 20 3 23 3 3 28 81 101 -9.183 -0.010 -7.501 -0.491 -0.983 1.108 -0.675 D 22 20 3 23 3 0 25 80 99 -6.390 -1.568 -0.620 IR 23 23 3 23 3 2 28 82 102 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 8 ] - 71 - U - - MR 24 23 3 26 3 3 27 80 100 -9.183 -0.010 -7.501 -1.970 -1.971 -2.078 1.702 D 25 23 3 26 3 0 25 79 98 -6.390 -1.568 -0.620 IR 26 26 3 26 3 1 27 81 101 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 9 ] - 70 - u - - MR 27 26 3 29 3 2 26 79 99 -9.183 -0.010 -7.501 -0.657 0.462 -1.250 0.649 D 28 26 3 29 3 0 24 78 98 -6.390 -1.568 -0.620 IR 29 29 3 29 3 1 26 80 100 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 10 ] - 69 - u - - MR 30 29 3 32 2 1 25 78 98 -9.354 -0.002 0.136 -0.054 -0.254 0.137 D 31 29 3 32 2 0 24 78 97 -4.432 -0.068 IR 32 32 3 32 2 1 25 79 99 -1.823 -0.479 0.000 0.000 0.000 0.000 [ BIF 11 ] - - - - - - B 33 32 3 34 90 0 24 77 97 [ BEGL 12 ] - - - - - - S 34 33 1 35 4 0 0 31 50 -0.031 -7.371 -6.778 -7.418 [ MATP 13 ] 6 23 G C - - MP 35 34 1 39 6 2 2 31 50 -9.531 -9.470 -0.016 -8.247 -8.526 -8.921 -4.093 -2.802 -4.010 0.817 -5.074 -4.834 -0.305 -4.515 -4.212 3.091 -4.583 1.671 -0.557 -4.047 -2.288 -1.686 ML 36 34 1 39 6 1 1 29 48 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 37 34 1 39 6 1 1 29 48 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 38 34 1 39 6 0 0 27 46 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 39 39 5 39 6 1 1 31 49 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 40 40 6 40 5 1 1 30 49 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 14 ] 7 22 C G - - MP 41 40 6 45 6 2 2 29 48 -9.531 -9.470 -0.016 -8.247 -8.526 -8.921 -7.469 -7.549 -6.680 -3.805 -5.179 -3.268 3.938 -6.565 -7.175 -3.665 -6.726 -5.674 -2.269 -7.499 -3.423 -6.009 ML 42 40 6 45 6 1 1 27 46 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 43 40 6 45 6 1 1 27 46 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 44 40 6 45 6 0 0 25 44 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 45 45 5 45 6 1 1 29 47 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 46 46 6 46 5 1 1 28 47 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 15 ] 8 21 a u - - MP 47 46 6 51 6 2 2 27 46 -9.531 -9.470 -0.016 -8.247 -8.526 -8.921 -2.698 -2.309 -2.912 2.242 -3.034 -3.711 0.482 -0.762 -2.856 0.985 -3.347 1.677 0.285 -3.063 -1.111 0.466 ML 48 46 6 51 6 1 1 26 44 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 49 46 6 51 6 1 1 25 44 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 50 46 6 51 6 0 0 23 42 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 51 51 5 51 6 1 1 27 45 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 52 52 6 52 5 1 1 26 45 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 16 ] 9 20 g c - - MP 53 52 6 57 6 2 2 25 44 -9.531 -9.470 -0.016 -8.247 -8.526 -8.921 -3.388 -2.417 -3.500 0.796 -3.978 -4.034 0.127 -3.893 -1.561 2.863 -0.407 1.457 -0.126 -3.453 -1.679 -2.512 ML 54 52 6 57 6 1 1 24 42 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 55 52 6 57 6 1 1 23 42 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 56 52 6 57 6 0 0 21 40 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 57 57 5 57 6 1 1 25 43 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 58 58 6 58 5 1 1 24 43 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 17 ] 10 19 A U - - MP 59 58 6 63 6 2 2 23 42 -9.531 -9.470 -0.016 -8.247 -8.526 -8.921 -5.449 -4.196 -5.162 3.841 -6.549 -7.846 -2.158 -5.100 -5.217 -0.739 -5.831 -1.497 -2.534 -6.651 -4.077 -4.054 ML 60 58 6 63 6 1 1 22 41 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 61 58 6 63 6 1 1 22 41 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 62 58 6 63 6 0 0 20 39 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 63 63 5 63 6 1 1 23 41 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 64 64 6 64 5 1 1 22 41 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 18 ] 11 18 c g - - MP 65 64 6 69 6 2 2 21 40 -9.531 -9.470 -0.016 -8.247 -8.526 -8.921 -2.812 -2.917 -2.941 0.415 -0.041 -2.374 2.503 -3.020 -2.966 0.439 -3.503 -1.239 1.726 -3.105 0.714 -2.026 ML 66 64 6 69 6 1 1 21 40 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 67 64 6 69 6 1 1 21 39 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 68 64 6 69 6 0 0 19 38 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 69 69 5 69 6 1 1 21 40 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 70 70 6 70 5 1 1 21 39 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 19 ] 12 17 g c - - MP 71 70 6 75 4 2 2 19 38 -7.869 -8.076 -0.028 -6.490 -2.510 -2.047 -2.702 0.925 -2.859 -3.355 0.715 -3.036 -0.447 2.375 0.640 0.610 0.511 -2.747 -0.891 -1.284 ML 72 70 6 75 4 1 1 20 39 -3.758 -3.940 -0.507 -2.670 0.368 -0.385 -0.191 0.094 MR 73 70 6 75 4 1 1 20 39 -4.809 -3.838 -1.706 -0.766 0.368 -0.385 -0.191 0.094 D 74 70 6 75 4 0 0 19 38 -4.568 -4.250 -2.265 -0.520 IL 75 75 5 75 4 1 1 22 41 -1.686 -2.369 -1.117 -4.855 0.000 0.000 0.000 0.000 IR 76 76 6 76 3 1 1 21 39 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 20 ] 13 - C - - - ML 77 76 6 79 3 1 1 16 34 -8.836 -0.011 -7.490 -3.714 1.901 -4.445 -2.810 D 78 76 6 79 3 0 0 16 34 -6.174 -1.687 -0.566 IL 79 79 3 79 3 1 1 20 38 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 21 ] 14 - u - - - ML 80 79 3 82 3 1 1 14 33 -8.836 -0.011 -7.490 -0.003 0.076 -0.204 0.111 D 81 79 3 82 3 0 0 15 33 -6.174 -1.687 -0.566 IL 82 82 3 82 3 1 1 19 37 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 22 ] 15 - C - - - ML 83 82 3 85 3 1 1 12 31 -8.836 -0.011 -7.490 -0.050 1.216 -2.248 -0.998 D 84 82 3 85 3 0 0 13 32 -6.174 -1.687 -0.566 IL 85 85 3 85 3 1 1 18 36 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 23 ] 16 - G - - - ML 86 85 3 88 2 1 1 1 1 * 0.000 -3.226 -4.636 1.922 -3.969 D 87 85 3 88 2 0 0 0 0 * 0.000 IL 88 88 3 88 2 1 1 13 28 -1.823 -0.479 0.000 0.000 0.000 0.000 [ END 24 ] - - - - - - E 89 88 3 -1 0 0 0 0 0 [ BEGR 25 ] - - - - - - S 90 33 1 91 5 0 10 59 79 -7.879 -0.023 -7.695 -7.907 -8.798 IL 91 91 2 91 5 1 8 60 80 -2.408 -0.496 -4.087 -5.920 -5.193 0.000 0.000 0.000 0.000 [ MATP 26 ] 24 68 G C - - MP 92 91 2 96 6 2 11 59 79 -9.531 -9.470 -0.016 -8.247 -8.526 -8.921 -3.857 -0.185 -3.808 0.734 -4.509 -2.422 -0.098 -4.384 -4.019 3.284 -4.348 -0.498 -0.342 -1.472 -1.987 -2.845 ML 93 91 2 96 6 1 5 58 78 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 94 91 2 96 6 1 4 58 78 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 95 91 2 96 6 0 1 57 76 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 96 96 5 96 6 1 7 59 78 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 97 97 6 97 5 1 7 59 78 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 27 ] 25 67 C G - - MP 98 97 6 102 4 2 9 57 76 -7.869 -8.076 -0.028 -6.490 -4.749 -4.771 -4.496 -0.945 -0.817 -4.949 3.360 -4.000 -4.514 -0.808 -4.838 -2.773 0.393 -4.827 1.130 -3.352 ML 99 97 6 102 4 1 4 58 77 -3.758 -3.940 -0.507 -2.670 0.368 -0.385 -0.191 0.094 MR 100 97 6 102 4 1 2 57 77 -4.809 -3.838 -1.706 -0.766 0.368 -0.385 -0.191 0.094 D 101 97 6 102 4 0 1 56 76 -4.568 -4.250 -2.265 -0.520 IL 102 102 5 102 4 1 6 59 79 -1.686 -2.369 -1.117 -4.855 0.000 0.000 0.000 0.000 IR 103 103 6 103 3 1 6 58 78 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 28 ] 26 - c - - - ML 104 103 6 106 5 1 8 55 74 -7.879 -0.023 -7.695 -7.907 -8.798 -0.105 0.238 -0.240 0.062 D 105 103 6 106 5 0 1 54 73 -4.959 -0.803 -4.221 -2.596 -2.508 IL 106 106 3 106 5 1 4 55 74 -2.408 -0.496 -4.087 -5.920 -5.193 0.000 0.000 0.000 0.000 [ MATP 29 ] 27 66 u a - - MP 107 106 3 111 6 2 9 54 73 -9.531 -9.470 -0.016 -8.247 -8.526 -8.921 -1.309 -1.877 -1.864 0.993 -1.853 -2.715 1.270 -2.213 -1.045 0.806 -1.509 -0.441 1.793 -0.600 0.917 -0.579 ML 108 106 3 111 6 1 2 52 72 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 109 106 3 111 6 1 2 52 72 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 110 106 3 111 6 0 0 50 69 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 111 111 5 111 6 1 4 54 73 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 112 112 6 112 5 1 4 53 72 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 30 ] 28 65 G C - - MP 113 112 6 117 6 2 8 52 71 -9.531 -9.470 -0.016 -8.247 -8.526 -8.921 -3.964 -1.859 -3.922 0.641 -4.616 -0.915 -0.197 -4.495 -4.093 3.356 -4.419 -0.576 -0.444 -1.207 -2.092 -2.959 ML 114 112 6 117 6 1 2 50 70 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 115 112 6 117 6 1 2 50 70 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 116 112 6 117 6 0 0 48 67 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 117 117 5 117 6 1 3 52 71 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 118 118 6 118 5 1 3 51 70 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 31 ] 29 64 C G - - MP 119 118 6 123 6 2 7 50 69 -9.531 -9.470 -0.016 -8.247 -8.526 -8.921 -4.334 -4.343 -1.736 -0.605 -3.109 -4.764 3.213 -3.836 -4.213 -0.463 -4.601 -2.374 0.549 -4.480 1.490 -3.093 ML 120 118 6 123 6 1 2 49 68 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 121 118 6 123 6 1 2 48 68 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 122 118 6 123 6 0 0 46 66 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 123 123 5 123 6 1 3 50 69 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 124 124 6 124 5 1 3 49 69 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 32 ] 30 63 c g - - MP 125 124 6 129 6 2 6 48 67 -9.531 -9.470 -0.016 -8.247 -8.526 -8.921 -1.738 -2.392 -1.887 0.721 0.849 -3.245 1.939 -2.631 -2.450 0.660 -3.011 -0.890 1.457 -2.552 1.008 -1.585 ML 126 124 6 129 6 1 2 47 67 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 127 124 6 129 6 1 2 47 66 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 128 124 6 129 6 0 0 45 65 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 129 129 5 129 6 1 2 48 67 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 130 130 6 130 5 1 2 47 67 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 33 ] 31 62 U A - - MP 131 130 6 135 4 2 4 46 65 -7.869 -8.076 -0.028 -6.490 -6.574 -6.428 -6.134 -2.652 -4.705 -6.482 -0.392 -5.522 -6.123 -2.625 -6.395 -4.298 3.856 -6.578 -2.317 -4.487 ML 132 130 6 135 4 1 1 47 66 -3.758 -3.940 -0.507 -2.670 0.368 -0.385 -0.191 0.094 MR 133 130 6 135 4 1 1 46 66 -4.809 -3.838 -1.706 -0.766 0.368 -0.385 -0.191 0.094 D 134 130 6 135 4 0 0 45 65 -4.568 -4.250 -2.265 -0.520 IL 135 135 5 135 4 1 2 48 67 -1.686 -2.369 -1.117 -4.855 0.000 0.000 0.000 0.000 IR 136 136 6 136 3 1 2 47 66 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 34 ] 32 - g - - - ML 137 136 6 139 3 1 3 44 63 -8.836 -0.011 -7.490 -0.114 -0.503 0.465 -0.014 D 138 136 6 139 3 0 0 42 62 -6.174 -1.687 -0.566 IL 139 139 3 139 3 1 1 46 65 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 35 ] 33 - U - - - ML 140 139 3 142 3 1 2 42 62 -9.183 -0.010 -7.501 -3.110 -2.850 -3.892 1.879 D 141 139 3 142 3 0 0 41 60 -5.620 -0.734 -1.403 IL 142 142 3 142 3 1 1 43 62 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 36 ] - 61 - G - - MR 143 142 3 145 3 1 2 41 61 -9.183 -0.010 -7.501 -3.226 -4.636 1.922 -3.969 D 144 142 3 145 3 0 0 40 59 -6.390 -1.568 -0.620 IR 145 145 3 145 3 1 1 42 61 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 37 ] - 60 - u - - MR 146 145 3 148 5 1 1 40 60 -7.879 -0.023 -7.695 -7.907 -8.798 0.065 -0.231 -0.163 0.274 D 147 145 3 148 5 0 0 40 59 -5.352 -0.707 -2.978 -4.409 -2.404 IR 148 148 3 148 5 1 1 41 60 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 38 ] 34 59 G C - - MP 149 148 3 153 4 2 2 39 59 -7.869 -8.076 -0.028 -6.490 -4.233 -2.868 -4.138 0.653 -5.075 -4.580 -0.320 -4.731 -4.325 3.248 -4.618 1.247 -0.586 -1.626 -2.305 -3.103 ML 150 148 3 153 4 1 1 40 60 -3.758 -3.940 -0.507 -2.670 0.368 -0.385 -0.191 0.094 MR 151 148 3 153 4 1 1 40 59 -4.809 -3.838 -1.706 -0.766 0.368 -0.385 -0.191 0.094 D 152 148 3 153 4 0 0 39 58 -4.568 -4.250 -2.265 -0.520 IL 153 153 5 153 4 1 1 42 61 -1.686 -2.369 -1.117 -4.855 0.000 0.000 0.000 0.000 IR 154 154 6 154 3 1 1 41 60 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 39 ] 35 - G - - - ML 155 154 6 157 3 1 1 37 56 -8.836 -0.011 -7.490 -3.226 -4.636 1.922 -3.969 D 156 154 6 157 3 0 0 36 55 -6.174 -1.687 -0.566 IL 157 157 3 157 3 1 1 40 59 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 40 ] 36 - A - - - ML 158 157 3 160 3 1 1 36 55 -9.183 -0.010 -7.501 1.088 -0.430 -1.570 -0.331 D 159 157 3 160 3 0 0 35 54 -5.620 -0.734 -1.403 IL 160 160 3 160 3 1 1 37 56 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 41 ] - 58 - G - - MR 161 160 3 163 3 1 1 35 54 -9.183 -0.010 -7.501 -2.435 -4.166 1.878 -3.569 D 162 160 3 163 3 0 0 34 52 -6.390 -1.568 -0.620 IR 163 163 3 163 3 1 1 36 55 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 42 ] - 57 - g - - MR 164 163 3 166 5 1 1 34 53 -7.879 -0.023 -7.695 -7.907 -8.798 0.554 -1.411 0.725 -0.992 D 165 163 3 166 5 0 0 33 52 -5.352 -0.707 -2.978 -4.409 -2.404 IR 166 166 3 166 5 1 1 34 53 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 43 ] 37 56 U A - - MP 167 166 3 171 6 2 2 33 52 -9.531 -9.470 -0.016 -8.247 -8.526 -8.921 -6.574 -6.428 -6.134 -2.652 -4.705 -6.482 -0.392 -5.522 -6.123 -2.625 -6.395 -4.298 3.856 -6.578 -2.317 -4.487 ML 168 166 3 171 6 1 1 33 52 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 169 166 3 171 6 1 1 32 51 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 170 166 3 171 6 0 0 31 50 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 171 171 5 171 6 1 1 33 52 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 172 172 6 172 5 1 1 33 52 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 44 ] 38 55 g c - - MP 173 172 6 177 4 2 2 31 50 -7.869 -8.076 -0.028 -6.490 -1.130 -1.781 -2.439 1.005 -2.573 -0.643 0.843 -2.839 -1.716 2.630 -3.074 -0.395 0.691 -1.371 -0.683 -1.648 ML 174 172 6 177 4 1 1 32 51 -3.758 -3.940 -0.507 -2.670 0.368 -0.385 -0.191 0.094 MR 175 172 6 177 4 1 1 32 51 -4.809 -3.838 -1.706 -0.766 0.368 -0.385 -0.191 0.094 D 176 172 6 177 4 0 0 31 50 -4.568 -4.250 -2.265 -0.520 IL 177 177 5 177 4 1 1 33 53 -1.686 -2.369 -1.117 -4.855 0.000 0.000 0.000 0.000 IR 178 178 6 178 3 1 1 32 51 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 45 ] 39 - A - - - ML 179 178 6 181 3 1 1 29 47 -8.836 -0.011 -7.490 1.222 -0.503 -1.410 -0.773 D 180 178 6 181 3 0 0 28 47 -6.174 -1.687 -0.566 IL 181 181 3 181 3 1 1 31 50 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 46 ] 40 - U - - - ML 182 181 3 184 3 1 1 27 46 -8.836 -0.011 -7.490 -3.110 -2.850 -3.892 1.879 D 183 181 3 184 3 0 0 27 45 -6.174 -1.687 -0.566 IL 184 184 3 184 3 1 1 30 49 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 47 ] 41 - G - - - ML 185 184 3 187 3 1 1 26 45 -8.836 -0.011 -7.490 -1.075 -0.944 1.390 -1.377 D 186 184 3 187 3 0 0 26 44 -6.174 -1.687 -0.566 IL 187 187 3 187 3 1 1 29 48 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 48 ] 42 - c - - - ML 188 187 3 190 3 1 1 25 44 -8.836 -0.011 -7.490 -0.361 0.804 -1.817 0.252 D 189 187 3 190 3 0 0 24 43 -6.174 -1.687 -0.566 IL 190 190 3 190 3 1 1 28 47 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 49 ] 43 - U - - - ML 191 190 3 193 3 1 1 24 43 -8.836 -0.011 -7.490 -3.110 -2.850 -3.892 1.879 D 192 190 3 193 3 0 0 23 42 -6.174 -1.687 -0.566 IL 193 193 3 193 3 1 1 27 46 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 50 ] 44 - g - - - ML 194 193 3 196 3 1 1 23 42 -8.836 -0.011 -7.490 -0.079 -0.081 0.380 -0.310 D 195 193 3 196 3 0 0 22 41 -6.174 -1.687 -0.566 IL 196 196 3 196 3 1 1 26 45 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 51 ] 45 - C - - - ML 197 196 3 199 3 1 1 22 40 -8.836 -0.011 -7.490 -0.306 1.040 -1.965 -0.186 D 198 196 3 199 3 0 0 21 40 -6.174 -1.687 -0.566 IL 199 199 3 199 3 1 1 25 44 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 52 ] 46 - U - - - ML 200 199 3 202 3 1 1 21 39 -8.836 -0.011 -7.490 -3.110 -2.850 -3.892 1.879 D 201 199 3 202 3 0 0 20 39 -6.174 -1.687 -0.566 IL 202 202 3 202 3 1 1 24 43 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 53 ] 47 - g - - - ML 203 202 3 205 3 1 1 20 38 -8.836 -0.011 -7.490 0.007 -0.083 0.353 -0.371 D 204 202 3 205 3 0 0 19 38 -6.174 -1.687 -0.566 IL 205 205 3 205 3 1 1 23 42 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 54 ] 48 - a - - - ML 206 205 3 208 3 1 1 19 37 -8.836 -0.011 -7.490 0.712 -0.873 0.182 -0.551 D 207 205 3 208 3 0 0 18 37 -6.174 -1.687 -0.566 IL 208 208 3 208 3 1 1 22 41 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 55 ] 49 - U - - - ML 209 208 3 211 3 1 1 17 36 -8.836 -0.011 -7.490 -3.110 -2.850 -3.892 1.879 D 210 208 3 211 3 0 0 17 35 -6.174 -1.687 -0.566 IL 211 211 3 211 3 1 1 21 40 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 56 ] 50 - a - - - ML 212 211 3 214 3 1 1 16 34 -6.014 -0.031 -7.490 0.584 -0.684 -0.029 -0.154 D 213 211 3 214 3 0 0 15 33 -6.174 -1.687 -0.566 IL 214 214 3 214 3 1 1 19 37 -1.521 -0.742 -4.221 0.000 0.000 0.000 0.000 [ MATL 57 ] 52 - g - - - ML 215 214 3 217 3 1 1 14 33 -8.836 -0.011 -7.490 -0.061 -1.271 0.405 0.382 D 216 214 3 217 3 0 0 15 33 -6.174 -1.687 -0.566 IL 217 217 3 217 3 1 1 19 37 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 58 ] 53 - g - - - ML 218 217 3 220 3 1 1 12 31 -8.836 -0.011 -7.490 -1.041 0.580 0.602 -0.995 D 219 217 3 220 3 0 0 13 32 -6.174 -1.687 -0.566 IL 220 220 3 220 3 1 1 18 36 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 59 ] 54 - c - - - ML 221 220 3 223 2 1 1 1 1 * 0.000 -0.368 0.626 -1.034 0.255 D 222 220 3 223 2 0 0 0 0 * 0.000 IL 223 223 3 223 2 1 1 13 28 -1.823 -0.479 0.000 0.000 0.000 0.000 [ END 60 ] - - - - - - E 224 223 3 -1 0 0 0 0 0 // HMMER3/f [3.4 | Aug 2023] NAME HCV_SL2531-SL2549 ACC RF04308 DESC Hepatitis C virus stem-loop SL2531 and SL2549AU LENG 72 MAXL 150 ALPH RNA RF no MM no CONS yes CS yes MAP yes DATE Wed Jul 10 23:24:55 2024 COM [1] /hps/software/users/agb/rfam/bin/cmbuild -F CM SEED COM [2] /hps/software/users/agb/rfam/bin/cmcalibrate --cpu 8 /nfs/production/agb/rfam/15/HCV_SL2531_SL2549/CM NSEQ 57 EFFN 7.079773 CKSUM 3826639606 STATS LOCAL MSV -7.9945 0.71889 STATS LOCAL VITERBI -9.1765 0.71889 STATS LOCAL FORWARD -3.6824 0.71889 HMM A C G U m->m m->i m->d i->m i->i d->m d->d COMPO 1.71787 1.45127 1.21075 1.24374 1.38629 1.38629 1.38629 1.38629 0.02452 4.41364 4.41364 1.46634 0.26236 0.00000 * 1 3.95677 3.72816 4.50530 0.05574 1 U - - : 1.38629 1.38629 1.38629 1.38629 0.02452 4.41364 4.41364 1.46634 0.26236 1.09861 0.40547 2 1.60277 1.32418 1.17383 1.49852 2 g - - : 1.38629 1.38629 1.38629 1.38629 0.02452 4.41364 4.41364 1.46634 0.26236 1.09861 0.40547 3 2.98198 0.39817 3.65389 1.37885 3 C - - : 1.38629 1.38629 1.38629 1.38629 0.02452 4.41364 4.41364 1.46634 0.26236 1.09861 0.40547 4 3.95677 3.72816 4.50530 0.05574 4 U - - : 1.38629 1.38629 1.38629 1.38629 0.02452 4.41364 4.41364 1.46634 0.26236 1.09861 0.40547 5 1.41876 2.10967 0.90492 1.46045 5 g - - : 1.38629 1.38629 1.38629 1.38629 0.02452 4.41364 4.41364 1.46634 0.26236 1.09861 0.40547 6 2.25266 3.11909 0.24302 2.71171 6 G - - < 1.38629 1.38629 1.38629 1.38629 0.02452 4.41364 4.41364 1.46634 0.26236 1.09861 0.40547 7 5.31660 0.02391 5.30637 4.28600 7 C - - < 1.38629 1.38629 1.38629 1.38629 0.02452 4.41364 4.41364 1.46634 0.26236 1.09861 0.40547 8 0.97486 2.30937 1.04634 1.75904 8 a - - < 1.38629 1.38629 1.38629 1.38629 0.02452 4.41364 4.41364 1.46634 0.26236 1.09861 0.40547 9 2.24452 2.90954 0.25411 2.75017 9 G - - < 1.38629 1.38629 1.38629 1.38629 0.02452 4.41364 4.41364 1.46634 0.26236 1.09861 0.40547 10 0.06783 4.50742 3.18319 4.33532 10 A - - < 1.38629 1.38629 1.38629 1.38629 0.02452 4.41364 4.41364 1.46634 0.26236 1.09861 0.40547 11 2.44465 0.74198 2.29956 1.08836 11 c - - < 1.38629 1.38629 1.38629 1.38629 0.02452 4.41364 4.41364 1.46634 0.26236 1.09861 0.40547 12 2.05261 2.43820 0.40364 2.15075 12 G - - < 1.38629 1.38629 1.38629 1.38629 0.02452 4.41364 4.41364 1.46634 0.26236 1.09861 0.40547 13 4.37879 0.04551 4.81855 3.73510 13 C - - _ 1.38629 1.38629 1.38629 1.38629 0.02452 4.41364 4.41364 1.46634 0.26236 1.09861 0.40547 14 1.41747 1.29767 1.50862 1.33450 14 c - - _ 1.38629 1.38629 1.38629 1.38629 0.02452 4.41364 4.41364 1.46634 0.26236 1.09861 0.40547 15 1.44177 0.46200 3.28704 2.34229 15 C - - _ 1.38629 1.38629 1.38629 1.38629 0.02452 4.41364 4.41364 1.46634 0.26236 1.09861 0.40547 16 3.99257 5.00931 0.03687 4.50369 16 G - - _ 1.38629 1.38629 1.38629 1.38629 0.02452 4.41364 4.41364 1.46634 0.26236 1.09861 0.40547 17 2.00562 0.93171 1.44676 1.44302 17 c - - > 1.38629 1.38629 1.38629 1.38629 0.02452 4.41364 4.41364 1.46634 0.26236 1.09861 0.40547 18 1.22050 2.36532 0.68318 2.24438 18 G - - > 1.38629 1.38629 1.38629 1.38629 0.02452 4.41364 4.41364 1.46634 0.26236 1.09861 0.40547 19 4.53036 3.59712 4.31172 0.05297 19 U - - > 1.38629 1.38629 1.38629 1.38629 0.02452 4.41364 4.41364 1.46634 0.26236 1.09861 0.40547 20 2.64480 0.68368 2.09464 1.20028 20 C - - > 1.38629 1.38629 1.38629 1.38629 0.02452 4.41364 4.41364 1.46634 0.26236 1.09861 0.40547 21 2.89540 2.33768 2.68530 0.24850 21 U - - > 1.38629 1.38629 1.38629 1.38629 0.02452 4.41364 4.41364 1.46634 0.26236 1.09861 0.40547 22 4.44100 4.57805 0.02812 5.17218 22 G - - > 1.38629 1.38629 1.38629 1.38629 0.02452 4.41364 4.41364 1.46634 0.26236 1.09861 0.40547 23 3.18142 0.57183 2.91271 1.07982 23 C - - > 1.38629 1.38629 1.38629 1.38629 0.02452 4.41364 4.41364 1.46634 0.26236 1.09861 0.40547 24 1.87188 2.82503 0.34508 2.54217 24 G - - < 1.38629 1.38629 1.38629 1.38629 0.02452 4.41364 4.41364 1.46634 0.26236 1.09861 0.40547 25 3.64970 0.31125 3.46408 1.55985 25 C - - < 1.38629 1.38629 1.38629 1.38629 0.02452 4.41364 4.41364 1.46634 0.26236 1.09861 0.40547 26 1.50091 1.17424 1.53481 1.37626 26 c - - - 1.38629 1.38629 1.38629 1.38629 0.02452 4.41364 4.41364 1.46634 0.26236 1.09861 0.40547 27 1.75655 1.73496 1.59893 0.80109 27 u - - < 1.38629 1.38629 1.38629 1.38629 0.02452 4.41364 4.41364 1.46634 0.26236 1.09861 0.40547 28 2.32419 2.49480 0.30094 2.53199 28 G - - < 1.38629 1.38629 1.38629 1.38629 0.02452 4.41364 4.41364 1.46634 0.26236 1.09861 0.40547 29 2.98213 0.44071 3.24884 1.32083 29 C - - < 1.38629 1.38629 1.38629 1.38629 0.02452 4.41364 4.41364 1.46634 0.26236 1.09861 0.40547 30 2.00434 0.91707 2.03251 1.09495 30 c - - < 1.38629 1.38629 1.38629 1.38629 0.02452 4.41364 4.41364 1.46634 0.26236 1.09861 0.40547 31 4.79276 3.49883 4.73699 0.04844 31 U - - < 1.38629 1.38629 1.38629 1.38629 0.02452 4.41364 4.41364 1.46634 0.26236 1.09861 0.40547 32 1.51100 1.74329 1.01136 1.42443 32 g - - - 1.38629 1.38629 1.38629 1.38629 0.02452 4.41364 4.41364 1.46634 0.26236 1.09861 0.40547 33 3.95677 3.72816 4.50530 0.05574 33 U - - - 1.38629 1.38629 1.38629 1.38629 0.02452 4.41364 4.41364 1.46634 0.26236 1.09861 0.40547 34 2.38855 3.13733 0.23038 2.65066 34 G - - < 1.38629 1.38629 1.38629 1.38629 0.02452 4.41364 4.41364 1.46634 0.26236 1.09861 0.40547 35 3.99257 5.00931 0.03687 4.50369 35 G - - - 1.38629 1.38629 1.38629 1.38629 0.02452 4.41364 4.41364 1.46634 0.26236 1.09861 0.40547 36 0.57703 1.68898 2.66846 1.69082 36 A - - - 1.38629 1.38629 1.38629 1.38629 0.02452 4.41364 4.41364 1.46634 0.26236 1.09861 0.40547 37 4.85336 3.50714 4.77490 0.04733 37 U - - < 1.38629 1.38629 1.38629 1.38629 0.02452 4.41364 4.41364 1.46634 0.26236 1.09861 0.40547 38 1.76585 1.87342 0.64731 1.88447 38 G - - < 1.38629 1.38629 1.38629 1.38629 0.02452 4.41364 4.41364 1.46634 0.26236 1.09861 0.40547 39 0.48190 1.73530 2.51793 2.07610 39 A - - _ 1.38629 1.38629 1.38629 1.38629 0.02452 4.41364 4.41364 1.46634 0.26236 1.09861 0.40547 40 3.95677 3.72816 4.50530 0.05574 40 U - - _ 1.38629 1.38629 1.38629 1.38629 0.02452 4.41364 4.41364 1.46634 0.26236 1.09861 0.40547 41 2.32405 2.04095 0.36403 2.55949 41 G - - _ 1.38629 1.38629 1.38629 1.38629 0.02452 4.41364 4.41364 1.46634 0.26236 1.09861 0.40547 42 1.69649 0.76096 2.86660 1.22908 42 c - - _ 1.38629 1.38629 1.38629 1.38629 0.02452 4.41364 4.41364 1.46634 0.26236 1.09861 0.40547 43 3.95677 3.72816 4.50530 0.05574 43 U - - _ 1.38629 1.38629 1.38629 1.38629 0.02452 4.41364 4.41364 1.46634 0.26236 1.09861 0.40547 44 1.48574 1.40677 1.07039 1.68277 44 g - - _ 1.38629 1.38629 1.38629 1.38629 0.02452 4.41364 4.41364 1.46634 0.26236 1.09861 0.40547 45 1.64485 0.59541 2.99196 1.58262 45 C - - _ 1.38629 1.38629 1.38629 1.38629 0.02452 4.41364 4.41364 1.46634 0.26236 1.09861 0.40547 46 3.95677 3.72816 4.50530 0.05574 46 U - - _ 1.38629 1.38629 1.38629 1.38629 0.02452 4.41364 4.41364 1.46634 0.26236 1.09861 0.40547 47 1.41572 1.40727 1.09000 1.73601 47 g - - _ 1.38629 1.38629 1.38629 1.38629 0.02452 4.41364 4.41364 1.46634 0.26236 1.09861 0.40547 48 0.86387 2.03530 1.22495 1.87042 48 a - - _ 1.38629 1.38629 1.38629 1.38629 0.02452 4.41364 4.41364 1.46634 0.26236 1.09861 0.40547 49 3.95677 3.72816 4.50530 0.05574 49 U - - _ 1.38629 1.38629 1.38629 1.38629 0.02452 4.41364 4.41364 1.46634 0.26236 1.09861 0.40547 50 0.95950 1.88851 1.38534 1.53535 50 a - - _ 1.38629 1.38629 1.38629 1.38629 0.03827 3.67149 4.41364 0.77757 0.61530 1.09861 0.40547 51 1.46725 2.41595 1.05157 1.10633 52 g - - _ 1.38629 1.38629 1.38629 1.38629 0.02452 4.41364 4.41364 1.46634 0.26236 1.09861 0.40547 52 2.40016 0.90372 0.89082 2.36534 53 g - - _ 1.38629 1.38629 1.38629 1.38629 0.02452 4.41364 4.41364 1.46634 0.26236 1.09861 0.40547 53 1.71006 0.89125 2.15831 1.22593 54 c - - _ 1.38629 1.38629 1.38629 1.38629 0.02452 4.41364 4.41364 1.46634 0.26236 1.09861 0.40547 54 1.98125 0.60219 2.00746 1.71390 55 C - - > 1.38629 1.38629 1.38629 1.38629 0.02452 4.41364 4.41364 1.46634 0.26236 1.09861 0.40547 55 0.05425 5.00227 3.33177 4.57049 56 A - - > 1.38629 1.38629 1.38629 1.38629 0.02452 4.41364 4.41364 1.46634 0.26236 1.09861 0.40547 56 0.99058 2.48855 0.81935 2.25482 57 g - - - 1.38629 1.38629 1.38629 1.38629 0.02452 4.41364 4.41364 1.46634 0.26236 1.09861 0.40547 57 3.28930 4.63898 0.06386 4.20514 58 G - - - 1.38629 1.38629 1.38629 1.38629 0.02452 4.41364 4.41364 1.46634 0.26236 1.09861 0.40547 58 3.25573 0.42207 2.95374 1.37193 59 C - - > 1.38629 1.38629 1.38629 1.38629 0.02452 4.41364 4.41364 1.46634 0.26236 1.09861 0.40547 59 1.36151 1.53793 1.47894 1.20057 60 u - - - 1.38629 1.38629 1.38629 1.38629 0.02452 4.41364 4.41364 1.46634 0.26236 1.09861 0.40547 60 3.99257 5.00931 0.03687 4.50369 61 G - - - 1.38629 1.38629 1.38629 1.38629 0.02452 4.41364 4.41364 1.46634 0.26236 1.09861 0.40547 61 0.05600 4.93181 3.31823 4.50676 62 A - - > 1.38629 1.38629 1.38629 1.38629 0.02452 4.41364 4.41364 1.46634 0.26236 1.09861 0.40547 62 1.09156 2.20309 0.89309 1.93476 63 g - - > 1.38629 1.38629 1.38629 1.38629 0.02452 4.41364 4.41364 1.46634 0.26236 1.09861 0.40547 63 2.59733 3.41097 0.16039 3.20137 64 G - - > 1.38629 1.38629 1.38629 1.38629 0.02452 4.41364 4.41364 1.46634 0.26236 1.09861 0.40547 64 3.23027 0.23221 2.93926 2.16482 65 C - - > 1.38629 1.38629 1.38629 1.38629 0.02452 4.41364 4.41364 1.46634 0.26236 1.09861 0.40547 65 1.19610 1.75506 1.17242 1.53658 66 g - - > 1.38629 1.38629 1.38629 1.38629 0.02452 4.41364 4.41364 1.46634 0.26236 1.09861 0.40547 66 2.29276 3.62442 0.17535 3.40555 67 G - - > 1.38629 1.38629 1.38629 1.38629 0.02452 4.41364 4.41364 1.46634 0.26236 1.09861 0.40547 67 3.14573 0.25676 2.84200 2.07863 68 C - - > 1.38629 1.38629 1.38629 1.38629 0.02452 4.41364 4.41364 1.46634 0.26236 1.09861 0.40547 68 1.30491 1.39784 1.54924 1.31206 69 a - - : 1.38629 1.38629 1.38629 1.38629 0.02452 4.41364 4.41364 1.46634 0.26236 1.09861 0.40547 69 1.95801 1.01072 2.33530 0.92099 70 u - - : 1.38629 1.38629 1.38629 1.38629 0.02452 4.41364 4.41364 1.46634 0.26236 1.09861 0.40547 70 3.05736 3.01579 2.94527 0.16088 71 U - - : 1.38629 1.38629 1.38629 1.38629 0.02452 4.41364 4.41364 1.46634 0.26236 1.09861 0.40547 71 1.83087 2.11725 0.54503 1.96942 72 G - - : 1.38629 1.38629 1.38629 1.38629 0.02452 4.41364 4.41364 1.46634 0.26236 1.09861 0.40547 72 2.52432 3.60717 0.18406 2.79900 73 G - - : 1.38629 1.38629 1.38629 1.38629 0.01234 4.40145 * 1.46634 0.26236 0.00000 * //