INFERNAL1/a [1.1.5 | Sep 2023] NAME mir-362 ACC RF04267 DESC mir-362 microRNA precursor family STATES 199 NODES 45 CLEN 65 W 81 ALPH RNA RF no CONS yes MAP yes DATE Wed Jul 10 17:25:29 2024 COM [1] /hps/software/users/agb/rfam/bin/cmbuild -F CM SEED COM [2] /hps/software/users/agb/rfam/bin/cmcalibrate --cpu 8 /nfs/production/agb/rfam/15/rescan/families/RF04267/CM PBEGIN 0.05 PEND 0.05 WBETA 1e-07 QDBBETA1 1e-07 QDBBETA2 1e-15 N2OMEGA 1.52588e-05 N3OMEGA 1.52588e-05 ELSELF -0.08926734 NSEQ 14 EFFN 1.500488 CKSUM 3900996964 NULL 0.000 0.000 0.000 0.000 GA 80.00 TC 82.00 NC 64.40 EFP7GF -8.6636 0.71926 ECMLC 0.73340 -3.81015 3.89158 1600000 340613 0.003523 ECMGC 0.48599 -13.85478 -1.72945 1600000 144974 0.002759 ECMLI 0.69857 -2.75324 4.84153 1600000 241726 0.004964 ECMGI 0.52406 -9.29903 1.19054 1600000 97602 0.004098 CM [ ROOT 0 ] - - - - - - S 0 -1 0 1 4 1 1 81 100 -6.760 -6.968 -0.224 -2.982 IL 1 1 2 1 4 1 9 85 105 -1.686 -2.369 -1.117 -4.855 0.000 0.000 0.000 0.000 IR 2 2 3 2 3 1 9 84 104 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 1 ] 1 - C - - - ML 3 2 3 5 3 1 9 81 101 -7.648 -0.026 -6.302 -1.014 1.350 -1.800 -0.580 D 4 2 3 5 3 0 4 79 99 -7.001 -1.654 -0.568 IL 5 5 3 5 3 1 8 83 103 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 2 ] 2 - U - - - ML 6 5 3 8 3 1 8 80 99 -7.697 -0.025 -6.351 -1.010 -1.094 -1.714 1.449 D 7 5 3 8 3 0 3 78 98 -6.779 -2.292 -0.346 IL 8 8 3 8 3 1 8 82 102 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 3 ] 3 - c - - - ML 9 8 3 11 3 1 7 79 98 -8.106 -0.022 -6.424 -0.605 0.834 -1.379 0.234 D 10 8 3 11 3 0 3 77 97 -6.017 -0.520 -1.800 IL 11 11 3 11 3 1 6 79 99 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 4 ] - 65 - A - - MR 12 11 3 14 3 1 7 78 97 -8.194 -0.021 -6.511 1.632 -2.026 -1.692 -1.536 D 13 11 3 14 3 0 1 76 96 -6.390 -1.568 -0.620 IR 14 14 3 14 3 1 5 78 98 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 5 ] - 64 - A - - MR 15 14 3 17 3 1 6 77 96 -8.194 -0.021 -6.511 1.632 -2.026 -1.692 -1.536 D 16 14 3 17 3 0 0 75 95 -6.390 -1.568 -0.620 IR 17 17 3 17 3 1 5 77 97 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 6 ] - 63 - A - - MR 18 17 3 20 5 1 6 76 95 -6.944 -0.043 -6.759 -6.971 -7.863 1.632 -2.026 -1.692 -1.536 D 19 17 3 20 5 0 0 74 94 -5.352 -0.707 -2.978 -4.409 -2.404 IR 20 20 3 20 5 1 3 76 96 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 7 ] 4 62 G C - - MP 21 20 3 25 6 2 7 75 94 -9.039 -8.978 -0.022 -7.755 -8.034 -8.429 -3.887 -1.418 -3.929 0.747 -4.387 -4.298 0.052 -4.294 -3.819 3.381 -4.200 -0.388 -0.245 -3.791 -1.904 -2.884 ML 22 20 3 25 6 1 2 73 93 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 23 20 3 25 6 1 2 73 93 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 24 20 3 25 6 0 0 71 90 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 25 25 5 25 6 1 3 74 94 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 26 26 6 26 5 1 3 74 94 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 8 ] 5 61 A U - - MP 27 26 6 31 6 2 7 73 92 -9.039 -8.978 -0.022 -7.755 -8.034 -8.429 -3.520 -2.625 -3.556 3.120 -3.761 -4.803 0.522 -3.614 -3.461 1.373 -3.995 -0.149 0.103 -4.035 -1.421 -2.408 ML 28 26 6 31 6 1 2 71 91 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 29 26 6 31 6 1 2 71 91 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 30 26 6 31 6 0 0 69 88 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 31 31 5 31 6 1 2 72 92 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 32 32 6 32 5 1 3 72 92 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 9 ] 6 60 A U - - MP 33 32 6 37 6 2 6 71 90 -9.039 -8.978 -0.022 -7.755 -8.034 -8.429 -3.520 -2.625 -3.556 3.120 -3.761 -4.803 0.522 -3.614 -3.461 1.373 -3.995 -0.149 0.103 -4.035 -1.421 -2.408 ML 34 32 6 37 6 1 1 69 89 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 35 32 6 37 6 1 1 69 89 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 36 32 6 37 6 0 0 67 86 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 37 37 5 37 6 1 2 70 90 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 38 38 6 38 5 1 2 70 90 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 10 ] 7 59 U A - - MP 39 38 6 43 6 2 6 69 88 -9.039 -8.978 -0.022 -7.755 -8.034 -8.429 -3.846 -3.656 -3.720 0.022 -2.740 -4.315 1.579 -3.410 -3.729 0.335 -4.119 -1.566 3.133 -4.008 -0.425 -2.585 ML 40 38 6 43 6 1 1 67 87 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 41 38 6 43 6 1 1 67 87 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 42 38 6 43 6 0 0 65 84 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 43 43 5 43 6 1 2 68 88 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 44 44 6 44 5 1 2 68 88 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 11 ] 8 58 C G - - MP 45 44 6 49 6 2 6 67 86 -9.039 -8.978 -0.022 -7.755 -8.034 -8.429 -4.206 -4.078 -3.952 -0.345 -2.750 -4.408 3.429 -3.525 -3.992 -0.049 -4.287 -2.022 0.796 -4.296 -0.451 -2.844 ML 46 44 6 49 6 1 1 65 85 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 47 44 6 49 6 1 1 65 85 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 48 44 6 49 6 0 0 63 82 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 49 49 5 49 6 1 2 66 86 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 50 50 6 50 5 1 2 66 86 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 12 ] 9 57 C G - - MP 51 50 6 55 6 2 5 65 84 -9.039 -8.978 -0.022 -7.755 -8.034 -8.429 -4.206 -4.078 -3.952 -0.345 -2.750 -4.408 3.429 -3.525 -3.992 -0.049 -4.287 -2.022 0.796 -4.296 -0.451 -2.844 ML 52 50 6 55 6 1 1 63 83 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 53 50 6 55 6 1 1 63 83 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 54 50 6 55 6 0 0 61 80 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 55 55 5 55 6 1 1 64 84 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 56 56 6 56 5 1 2 64 84 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 13 ] 10 56 U A - - MP 57 56 6 61 6 2 5 63 82 -9.039 -8.978 -0.022 -7.755 -8.034 -8.429 -3.846 -3.656 -3.720 0.022 -2.740 -4.315 1.579 -3.410 -3.729 0.335 -4.119 -1.566 3.133 -4.008 -0.425 -2.585 ML 58 56 6 61 6 1 1 61 81 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 59 56 6 61 6 1 1 61 81 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 60 56 6 61 6 0 0 59 78 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 61 61 5 61 6 1 1 62 82 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 62 62 6 62 5 1 1 62 82 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 14 ] 11 55 U A - - MP 63 62 6 67 6 2 5 61 80 -9.039 -8.978 -0.022 -7.755 -8.034 -8.429 -3.846 -3.656 -3.720 0.022 -2.740 -4.315 1.579 -3.410 -3.729 0.335 -4.119 -1.566 3.133 -4.008 -0.425 -2.585 ML 64 62 6 67 6 1 1 59 79 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 65 62 6 67 6 1 1 59 79 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 66 62 6 67 6 0 0 57 76 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 67 67 5 67 6 1 1 60 80 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 68 68 6 68 5 1 1 60 80 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 15 ] 12 54 G C - - MP 69 68 6 73 6 2 4 59 78 -9.039 -8.978 -0.022 -7.755 -8.034 -8.429 -4.407 -2.936 -4.482 0.418 -4.761 -4.558 -0.207 -4.696 -4.101 3.546 -4.463 -0.625 -0.603 -4.246 -2.228 -3.364 ML 70 68 6 73 6 1 1 57 77 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 71 68 6 73 6 1 1 57 77 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 72 68 6 73 6 0 0 55 75 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 73 73 5 73 6 1 1 58 78 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 74 74 6 74 5 1 1 58 78 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 16 ] 13 53 g u - - MP 75 74 6 79 6 2 4 57 76 -9.039 -8.978 -0.022 -7.755 -8.034 -8.429 -3.403 -2.261 -3.550 1.255 -4.091 -4.826 0.259 -3.605 -3.276 1.644 -3.787 2.817 -0.102 -4.072 -1.681 -2.300 ML 76 74 6 79 6 1 1 56 76 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 77 74 6 79 6 1 1 56 75 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 78 74 6 79 6 0 0 54 74 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 79 79 5 79 6 1 1 56 76 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 80 80 6 80 5 1 1 56 76 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 17 ] 14 52 A U - - MP 81 80 6 85 4 2 2 55 74 -6.760 -6.968 -0.061 -5.382 -3.520 -2.625 -3.556 3.120 -3.761 -4.803 0.522 -3.614 -3.461 1.373 -3.995 -0.149 0.103 -4.035 -1.421 -2.408 ML 82 80 6 85 4 1 1 55 75 -3.758 -3.940 -0.507 -2.670 0.368 -0.385 -0.191 0.094 MR 83 80 6 85 4 1 1 54 74 -4.809 -3.838 -1.706 -0.766 0.368 -0.385 -0.191 0.094 D 84 80 6 85 4 0 0 53 73 -4.568 -4.250 -2.265 -0.520 IL 85 85 5 85 4 1 1 56 76 -1.686 -2.369 -1.117 -4.855 0.000 0.000 0.000 0.000 IR 86 86 6 86 3 1 1 55 75 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 18 ] 15 - A - - - ML 87 86 6 89 3 1 1 52 72 -7.791 -0.023 -6.445 1.632 -2.026 -1.692 -1.536 D 88 86 6 89 3 0 0 51 70 -6.174 -1.687 -0.566 IL 89 89 3 89 3 1 1 54 74 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 19 ] 16 - C - - - ML 90 89 3 92 3 1 1 51 70 -7.791 -0.023 -6.445 -1.330 1.492 -2.137 -0.829 D 91 89 3 92 3 0 0 50 69 -6.174 -1.687 -0.566 IL 92 92 3 92 3 1 1 53 73 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 20 ] 17 - C - - - ML 93 92 3 95 5 1 1 50 69 -6.944 -0.043 -6.759 -6.971 -7.863 -1.330 1.492 -2.137 -0.829 D 94 92 3 95 5 0 0 49 68 -4.959 -0.803 -4.221 -2.596 -2.508 IL 95 95 3 95 5 1 1 50 70 -2.408 -0.496 -4.087 -5.920 -5.193 0.000 0.000 0.000 0.000 [ MATP 21 ] 18 51 u a - - MP 96 95 3 100 6 2 2 49 68 -9.039 -8.978 -0.022 -7.755 -8.034 -8.429 -3.369 -3.312 -3.317 0.313 -2.434 -3.949 1.852 -3.091 -3.340 0.590 -3.765 -1.361 2.667 -3.545 0.822 -2.248 ML 97 95 3 100 6 1 1 48 67 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 98 95 3 100 6 1 1 47 67 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 99 95 3 100 6 0 0 45 64 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 100 100 5 100 6 1 1 49 68 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 101 101 6 101 5 1 1 48 68 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 22 ] 19 50 A U - - MP 102 101 6 106 6 2 2 47 66 -9.039 -8.978 -0.022 -7.755 -8.034 -8.429 -3.520 -2.625 -3.556 3.120 -3.761 -4.803 0.522 -3.614 -3.461 1.373 -3.995 -0.149 0.103 -4.035 -1.421 -2.408 ML 103 101 6 106 6 1 1 46 65 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 104 101 6 106 6 1 1 45 65 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 105 101 6 106 6 0 0 43 62 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 106 106 5 106 6 1 1 47 66 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 107 107 6 107 5 1 1 46 66 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 23 ] 20 49 G C - - MP 108 107 6 112 6 2 2 45 64 -9.039 -8.978 -0.022 -7.755 -8.034 -8.429 -4.407 -2.936 -4.482 0.418 -4.761 -4.558 -0.207 -4.696 -4.101 3.546 -4.463 -0.625 -0.603 -4.246 -2.228 -3.364 ML 109 107 6 112 6 1 1 44 63 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 110 107 6 112 6 1 1 43 63 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 111 107 6 112 6 0 0 41 60 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 112 112 5 112 6 1 1 45 64 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 113 113 6 113 5 1 1 44 64 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 24 ] 21 48 G C - - MP 114 113 6 118 6 2 2 43 62 -9.039 -8.978 -0.022 -7.755 -8.034 -8.429 -4.407 -2.936 -4.482 0.418 -4.761 -4.558 -0.207 -4.696 -4.101 3.546 -4.463 -0.625 -0.603 -4.246 -2.228 -3.364 ML 115 113 6 118 6 1 1 42 61 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 116 113 6 118 6 1 1 41 61 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 117 113 6 118 6 0 0 39 58 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 118 118 5 118 6 1 1 43 62 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 119 119 6 119 5 1 1 42 62 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 25 ] 22 47 U A - - MP 120 119 6 124 6 2 2 41 60 -9.039 -8.978 -0.022 -7.755 -8.034 -8.429 -3.846 -3.656 -3.720 0.022 -2.740 -4.315 1.579 -3.410 -3.729 0.335 -4.119 -1.566 3.133 -4.008 -0.425 -2.585 ML 121 119 6 124 6 1 1 40 59 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 122 119 6 124 6 1 1 39 59 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 123 119 6 124 6 0 0 37 57 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 124 124 5 124 6 1 1 41 60 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 125 125 6 125 5 1 1 40 60 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 26 ] 23 46 G C - - MP 126 125 6 130 6 2 2 39 58 -9.039 -8.978 -0.022 -7.755 -8.034 -8.429 -4.407 -2.936 -4.482 0.418 -4.761 -4.558 -0.207 -4.696 -4.101 3.546 -4.463 -0.625 -0.603 -4.246 -2.228 -3.364 ML 127 125 6 130 6 1 1 38 57 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 128 125 6 130 6 1 1 38 57 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 129 125 6 130 6 0 0 35 55 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 130 130 5 130 6 1 1 39 58 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 131 131 6 131 5 1 1 38 58 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 27 ] 24 45 U A - - MP 132 131 6 136 6 2 2 37 56 -9.039 -8.978 -0.022 -7.755 -8.034 -8.429 -3.846 -3.656 -3.720 0.022 -2.740 -4.315 1.579 -3.410 -3.729 0.335 -4.119 -1.566 3.133 -4.008 -0.425 -2.585 ML 133 131 6 136 6 1 1 36 56 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 134 131 6 136 6 1 1 36 55 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 135 131 6 136 6 0 0 34 54 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 136 136 5 136 6 1 1 37 56 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 137 137 6 137 5 1 1 36 56 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 28 ] 25 44 G C - - MP 138 137 6 142 4 2 2 35 54 -6.760 -6.968 -0.061 -5.382 -4.407 -2.936 -4.482 0.418 -4.761 -4.558 -0.207 -4.696 -4.101 3.546 -4.463 -0.625 -0.603 -4.246 -2.228 -3.364 ML 139 137 6 142 4 1 1 35 55 -3.758 -3.940 -0.507 -2.670 0.368 -0.385 -0.191 0.094 MR 140 137 6 142 4 1 1 35 54 -4.809 -3.838 -1.706 -0.766 0.368 -0.385 -0.191 0.094 D 141 137 6 142 4 0 0 34 53 -4.568 -4.250 -2.265 -0.520 IL 142 142 5 142 4 1 1 37 56 -1.686 -2.369 -1.117 -4.855 0.000 0.000 0.000 0.000 IR 143 143 6 143 3 1 1 36 55 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 29 ] 26 - A - - - ML 144 143 6 146 3 1 1 32 52 -7.791 -0.023 -6.445 1.632 -2.026 -1.692 -1.536 D 145 143 6 146 3 0 0 31 50 -6.174 -1.687 -0.566 IL 146 146 3 146 3 1 1 35 54 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 30 ] 27 - G - - - ML 147 146 3 149 3 1 1 31 50 -8.194 -0.021 -6.511 -0.236 -1.674 1.239 -1.070 D 148 146 3 149 3 0 0 30 49 -5.620 -0.734 -1.403 IL 149 149 3 149 3 1 1 32 51 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 31 ] - 43 - A - - MR 150 149 3 152 5 1 1 30 49 -6.944 -0.043 -6.759 -6.971 -7.863 1.632 -2.026 -1.692 -1.536 D 151 149 3 152 5 0 0 29 48 -5.352 -0.707 -2.978 -4.409 -2.404 IR 152 152 3 152 5 1 1 31 50 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 32 ] 28 42 U A - - MP 153 152 3 157 6 2 2 29 48 -9.039 -8.978 -0.022 -7.755 -8.034 -8.429 -3.846 -3.656 -3.720 0.022 -2.740 -4.315 1.579 -3.410 -3.729 0.335 -4.119 -1.566 3.133 -4.008 -0.425 -2.585 ML 154 152 3 157 6 1 1 28 47 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 155 152 3 157 6 1 1 28 47 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 156 152 3 157 6 0 0 26 45 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 157 157 5 157 6 1 1 29 48 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 158 158 6 158 5 1 1 29 48 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 33 ] 29 41 G C - - MP 159 158 6 163 6 2 2 27 46 -9.039 -8.978 -0.022 -7.755 -8.034 -8.429 -4.407 -2.936 -4.482 0.418 -4.761 -4.558 -0.207 -4.696 -4.101 3.546 -4.463 -0.625 -0.603 -4.246 -2.228 -3.364 ML 160 158 6 163 6 1 1 27 46 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 161 158 6 163 6 1 1 26 46 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 162 158 6 163 6 0 0 25 44 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 163 163 5 163 6 1 1 27 46 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 164 164 6 164 5 1 1 27 46 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 34 ] 30 40 C G - - MP 165 164 6 169 4 2 2 25 44 -6.760 -6.968 -0.061 -5.382 -4.206 -4.078 -3.952 -0.345 -2.750 -4.408 3.429 -3.525 -3.992 -0.049 -4.287 -2.022 0.796 -4.296 -0.451 -2.844 ML 166 164 6 169 4 1 1 26 45 -3.758 -3.940 -0.507 -2.670 0.368 -0.385 -0.191 0.094 MR 167 164 6 169 4 1 1 25 45 -4.809 -3.838 -1.706 -0.766 0.368 -0.385 -0.191 0.094 D 168 164 6 169 4 0 0 24 44 -4.568 -4.250 -2.265 -0.520 IL 169 169 5 169 4 1 1 27 46 -1.686 -2.369 -1.117 -4.855 0.000 0.000 0.000 0.000 IR 170 170 6 170 3 1 1 26 45 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 35 ] 31 - U - - - ML 171 170 6 173 3 1 1 22 41 -7.791 -0.023 -6.445 -0.858 -0.707 -1.581 1.323 D 172 170 6 173 3 0 0 21 40 -6.174 -1.687 -0.566 IL 173 173 3 173 3 1 1 25 44 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 36 ] 32 - a - - - ML 174 173 3 176 3 1 1 21 40 -7.791 -0.023 -6.445 0.780 -1.240 0.291 -0.653 D 175 173 3 176 3 0 0 20 39 -6.174 -1.687 -0.566 IL 176 176 3 176 3 1 1 24 43 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 37 ] 33 - u - - - ML 177 176 3 179 3 1 1 20 39 -7.791 -0.023 -6.445 -0.573 0.267 -1.327 0.787 D 178 176 3 179 3 0 0 19 38 -6.174 -1.687 -0.566 IL 179 179 3 179 3 1 1 23 42 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 38 ] 34 - U - - - ML 180 179 3 182 3 1 1 19 38 -7.791 -0.023 -6.445 -1.173 -1.226 -1.889 1.516 D 181 179 3 182 3 0 0 18 37 -6.174 -1.687 -0.566 IL 182 182 3 182 3 1 1 22 41 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 39 ] 35 - u - - - ML 183 182 3 185 3 1 1 18 36 -7.791 -0.023 -6.445 -0.621 -0.053 -1.361 0.997 D 184 182 3 185 3 0 0 17 36 -6.174 -1.687 -0.566 IL 185 185 3 185 3 1 1 21 40 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 40 ] 36 - c - - - ML 186 185 3 188 3 1 1 16 35 -7.791 -0.023 -6.445 -0.654 0.805 -1.436 0.319 D 187 185 3 188 3 0 0 16 34 -6.174 -1.687 -0.566 IL 188 188 3 188 3 1 1 20 38 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 41 ] 37 - A - - - ML 189 188 3 191 3 1 1 15 33 -7.791 -0.023 -6.445 1.425 -1.597 -0.963 -1.085 D 190 188 3 191 3 0 0 15 33 -6.174 -1.687 -0.566 IL 191 191 3 191 3 1 1 19 37 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 42 ] 38 - G - - - ML 192 191 3 194 3 1 1 13 32 -7.791 -0.023 -6.445 -1.211 -2.369 1.622 -1.753 D 193 191 3 194 3 0 0 13 32 -6.174 -1.687 -0.566 IL 194 194 3 194 3 1 1 18 36 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 43 ] 39 - U - - - ML 195 194 3 197 2 1 1 1 1 * 0.000 -1.173 -1.226 -1.889 1.516 D 196 194 3 197 2 0 0 0 0 * 0.000 IL 197 197 3 197 2 1 1 13 28 -1.823 -0.479 0.000 0.000 0.000 0.000 [ END 44 ] - - - - - - E 198 197 3 -1 0 0 0 0 0 // HMMER3/f [3.4 | Aug 2023] NAME mir-362 ACC RF04267 DESC mir-362 microRNA precursor family LENG 65 MAXL 151 ALPH RNA RF no MM no CONS yes CS yes MAP yes DATE Wed Jul 10 17:25:29 2024 COM [1] /hps/software/users/agb/rfam/bin/cmbuild -F CM SEED COM [2] /hps/software/users/agb/rfam/bin/cmcalibrate --cpu 8 /nfs/production/agb/rfam/15/rescan/families/RF04267/CM NSEQ 14 EFFN 2.300293 CKSUM 3900996964 STATS LOCAL MSV -8.1931 0.71926 STATS LOCAL VITERBI -8.8393 0.71926 STATS LOCAL FORWARD -3.5103 0.71926 HMM A C G U m->m m->i m->d i->m i->i d->m d->d COMPO 1.33278 1.41947 1.43767 1.35894 1.38629 1.38629 1.38629 1.38629 0.16977 3.87000 2.00036 1.46634 0.26236 0.00000 * 1 2.51843 0.28154 3.08690 2.12735 1 C - - : 1.38629 1.38629 1.38629 1.38629 0.04825 3.74848 3.74848 1.46634 0.26236 1.11045 0.39960 2 2.43741 2.43115 2.94702 0.25854 2 U - - : 1.38629 1.38629 1.38629 1.38629 0.04625 3.78990 3.78990 1.46634 0.26236 1.90070 0.16189 3 2.00363 0.67983 2.56628 1.26717 3 C - - : 1.38629 1.38629 1.38629 1.38629 0.04625 3.78990 3.78990 1.46634 0.26236 0.35514 1.20755 4 2.10724 2.92669 0.26889 2.80302 4 G - - < 1.38629 1.38629 1.38629 1.38629 0.04261 3.87000 3.87000 1.46634 0.26236 1.09861 0.40547 5 0.35047 2.74721 1.81437 2.67951 5 A - - < 1.38629 1.38629 1.38629 1.38629 0.04261 3.87000 3.87000 1.46634 0.26236 1.09861 0.40547 6 0.35035 2.74766 1.81445 2.68017 6 A - - < 1.38629 1.38629 1.38629 1.38629 0.04261 3.87000 3.87000 1.46634 0.26236 1.09861 0.40547 7 2.94657 1.88634 2.69470 0.31705 7 U - - < 1.38629 1.38629 1.38629 1.38629 0.04261 3.87000 3.87000 1.46634 0.26236 1.09861 0.40547 8 3.17432 0.24547 2.94735 2.09261 8 C - - < 1.38629 1.38629 1.38629 1.38629 0.04261 3.87000 3.87000 1.46634 0.26236 1.09861 0.40547 9 3.17361 0.24555 2.94702 2.09248 9 C - - < 1.38629 1.38629 1.38629 1.38629 0.04261 3.87000 3.87000 1.46634 0.26236 1.09861 0.40547 10 2.94508 1.88626 2.69405 0.31724 10 U - - < 1.38629 1.38629 1.38629 1.38629 0.04261 3.87000 3.87000 1.46634 0.26236 1.09861 0.40547 11 2.94457 1.88624 2.69383 0.31730 11 U - - < 1.38629 1.38629 1.38629 1.38629 0.04261 3.87000 3.87000 1.46634 0.26236 1.09861 0.40547 12 2.57055 3.21738 0.17333 3.15623 12 G - - < 1.38629 1.38629 1.38629 1.38629 0.04261 3.87000 3.87000 1.46634 0.26236 1.09861 0.40547 13 1.90970 2.87732 0.31251 2.74915 13 G - - < 1.38629 1.38629 1.38629 1.38629 0.04261 3.87000 3.87000 1.46634 0.26236 1.09861 0.40547 14 0.35067 2.74648 1.81425 2.67845 14 A - - < 1.38629 1.38629 1.38629 1.38629 0.04261 3.87000 3.87000 1.46634 0.26236 1.09861 0.40547 15 0.15831 3.21951 2.94552 2.92133 15 A - - - 1.38629 1.38629 1.38629 1.38629 0.04261 3.87000 3.87000 1.46634 0.26236 1.09861 0.40547 16 2.82232 0.20628 3.39814 2.36984 16 C - - - 1.38629 1.38629 1.38629 1.38629 0.04261 3.87000 3.87000 1.46634 0.26236 1.09861 0.40547 17 2.82232 0.20628 3.39814 2.36984 17 C - - - 1.38629 1.38629 1.38629 1.38629 0.04261 3.87000 3.87000 1.46634 0.26236 1.09861 0.40547 18 2.53096 1.51536 2.29238 0.51139 18 U - - < 1.38629 1.38629 1.38629 1.38629 0.04261 3.87000 3.87000 1.46634 0.26236 1.09861 0.40547 19 0.35013 2.74847 1.81459 2.68135 19 A - - < 1.38629 1.38629 1.38629 1.38629 0.04261 3.87000 3.87000 1.46634 0.26236 1.09861 0.40547 20 2.57284 3.22006 0.17280 3.15997 20 G - - < 1.38629 1.38629 1.38629 1.38629 0.04261 3.87000 3.87000 1.46634 0.26236 1.09861 0.40547 21 2.57230 3.21943 0.17293 3.15909 21 G - - < 1.38629 1.38629 1.38629 1.38629 0.04261 3.87000 3.87000 1.46634 0.26236 1.09861 0.40547 22 2.94613 1.88632 2.69451 0.31711 22 U - - < 1.38629 1.38629 1.38629 1.38629 0.04261 3.87000 3.87000 1.46634 0.26236 1.09861 0.40547 23 2.57137 3.21834 0.17314 3.15757 23 G - - < 1.38629 1.38629 1.38629 1.38629 0.04261 3.87000 3.87000 1.46634 0.26236 1.09861 0.40547 24 2.94485 1.88625 2.69395 0.31727 24 U - - < 1.38629 1.38629 1.38629 1.38629 0.04261 3.87000 3.87000 1.46634 0.26236 1.09861 0.40547 25 2.57069 3.21754 0.17330 3.15645 25 G - - < 1.38629 1.38629 1.38629 1.38629 0.04261 3.87000 3.87000 1.46634 0.26236 1.09861 0.40547 26 0.15831 3.21951 2.94552 2.92133 26 A - - - 1.38629 1.38629 1.38629 1.38629 0.04261 3.87000 3.87000 1.46634 0.26236 1.09861 0.40547 27 1.67707 2.83201 0.40643 2.42863 27 G - - - 1.38629 1.38629 1.38629 1.38629 0.04261 3.87000 3.87000 1.46634 0.26236 1.09861 0.40547 28 2.94570 1.88629 2.69432 0.31716 28 U - - < 1.38629 1.38629 1.38629 1.38629 0.04261 3.87000 3.87000 1.46634 0.26236 1.09861 0.40547 29 2.57280 3.22002 0.17281 3.15991 29 G - - < 1.38629 1.38629 1.38629 1.38629 0.04261 3.87000 3.87000 1.46634 0.26236 1.09861 0.40547 30 3.17671 0.24521 2.94848 2.09302 30 C - - < 1.38629 1.38629 1.38629 1.38629 0.04261 3.87000 3.87000 1.46634 0.26236 1.09861 0.40547 31 2.24372 2.01139 2.75603 0.36156 31 U - - _ 1.38629 1.38629 1.38629 1.38629 0.04261 3.87000 3.87000 1.46634 0.26236 1.09861 0.40547 32 0.78821 2.42941 1.12137 2.02937 32 a - - _ 1.38629 1.38629 1.38629 1.38629 0.04261 3.87000 3.87000 1.46634 0.26236 1.09861 0.40547 33 1.95369 1.13509 2.49603 0.78868 33 u - - _ 1.38629 1.38629 1.38629 1.38629 0.04261 3.87000 3.87000 1.46634 0.26236 1.09861 0.40547 34 2.59141 2.55854 3.10806 0.21942 34 U - - _ 1.38629 1.38629 1.38629 1.38629 0.04261 3.87000 3.87000 1.46634 0.26236 1.09861 0.40547 35 2.00223 1.40857 2.53062 0.61459 35 U - - _ 1.38629 1.38629 1.38629 1.38629 0.04261 3.87000 3.87000 1.46634 0.26236 1.09861 0.40547 36 2.04393 0.70671 2.61348 1.19093 36 c - - _ 1.38629 1.38629 1.38629 1.38629 0.04261 3.87000 3.87000 1.46634 0.26236 1.09861 0.40547 37 0.30408 2.76124 2.19204 2.43845 37 A - - _ 1.38629 1.38629 1.38629 1.38629 0.04261 3.87000 3.87000 1.46634 0.26236 1.09861 0.40547 38 2.67993 3.55498 0.15181 3.13051 38 G - - _ 1.38629 1.38629 1.38629 1.38629 0.04261 3.87000 3.87000 1.46634 0.26236 1.09861 0.40547 39 2.59141 2.55854 3.10806 0.21942 39 U - - _ 1.38629 1.38629 1.38629 1.38629 0.04261 3.87000 3.87000 1.46634 0.26236 1.09861 0.40547 40 2.37203 3.11805 0.21138 2.93744 40 G - - > 1.38629 1.38629 1.38629 1.38629 0.04261 3.87000 3.87000 1.46634 0.26236 1.09861 0.40547 41 3.37420 0.20347 3.05882 2.27382 41 C - - > 1.38629 1.38629 1.38629 1.38629 0.04261 3.87000 3.87000 1.46634 0.26236 1.09861 0.40547 42 0.35866 2.88354 1.72373 2.70232 42 A - - > 1.38629 1.38629 1.38629 1.38629 0.04261 3.87000 3.87000 1.46634 0.26236 1.09861 0.40547 43 0.15831 3.21951 2.94552 2.92133 43 A - - - 1.38629 1.38629 1.38629 1.38629 0.04261 3.87000 3.87000 1.46634 0.26236 1.09861 0.40547 44 3.35753 0.20500 3.05153 2.27065 44 C - - > 1.38629 1.38629 1.38629 1.38629 0.04261 3.87000 3.87000 1.46634 0.26236 1.09861 0.40547 45 0.36006 2.87724 1.72313 2.69458 45 A - - > 1.38629 1.38629 1.38629 1.38629 0.04261 3.87000 3.87000 1.46634 0.26236 1.09861 0.40547 46 3.35880 0.20488 3.05209 2.27089 46 C - - > 1.38629 1.38629 1.38629 1.38629 0.04261 3.87000 3.87000 1.46634 0.26236 1.09861 0.40547 47 0.36000 2.87752 1.72316 2.69492 47 A - - > 1.38629 1.38629 1.38629 1.38629 0.04261 3.87000 3.87000 1.46634 0.26236 1.09861 0.40547 48 3.35893 0.20487 3.05214 2.27092 48 C - - > 1.38629 1.38629 1.38629 1.38629 0.04261 3.87000 3.87000 1.46634 0.26236 1.09861 0.40547 49 3.35740 0.20501 3.05147 2.27062 49 C - - > 1.38629 1.38629 1.38629 1.38629 0.04261 3.87000 3.87000 1.46634 0.26236 1.09861 0.40547 50 2.90182 2.10557 2.55774 0.29327 50 U - - > 1.38629 1.38629 1.38629 1.38629 0.04261 3.87000 3.87000 1.46634 0.26236 1.09861 0.40547 51 0.73630 2.45466 1.09453 2.29731 51 a - - > 1.38629 1.38629 1.38629 1.38629 0.04261 3.87000 3.87000 1.46634 0.26236 1.09861 0.40547 52 2.90352 2.10577 2.55838 0.29305 52 U - - > 1.38629 1.38629 1.38629 1.38629 0.04261 3.87000 3.87000 1.46634 0.26236 1.09861 0.40547 53 2.95831 1.89125 2.67635 0.31691 53 U - - > 1.38629 1.38629 1.38629 1.38629 0.04261 3.87000 3.87000 1.46634 0.26236 1.09861 0.40547 54 3.35758 0.20500 3.05155 2.27066 54 C - - > 1.38629 1.38629 1.38629 1.38629 0.04261 3.87000 3.87000 1.46634 0.26236 1.09861 0.40547 55 0.36004 2.87734 1.72314 2.69469 55 A - - > 1.38629 1.38629 1.38629 1.38629 0.04261 3.87000 3.87000 1.46634 0.26236 1.09861 0.40547 56 0.35996 2.87768 1.72318 2.69511 56 A - - > 1.38629 1.38629 1.38629 1.38629 0.04261 3.87000 3.87000 1.46634 0.26236 1.09861 0.40547 57 2.36946 3.11458 0.21215 2.93323 57 G - - > 1.38629 1.38629 1.38629 1.38629 0.04261 3.87000 3.87000 1.46634 0.26236 1.09861 0.40547 58 2.37000 3.11530 0.21199 2.93411 58 G - - > 1.38629 1.38629 1.38629 1.38629 0.04261 3.87000 3.87000 1.46634 0.26236 1.09861 0.40547 59 0.35960 2.87929 1.72333 2.69710 59 A - - > 1.38629 1.38629 1.38629 1.38629 0.04261 3.87000 3.87000 1.46634 0.26236 1.09861 0.40547 60 2.91066 2.10660 2.56105 0.29211 60 U - - > 1.38629 1.38629 1.38629 1.38629 0.04261 3.87000 3.87000 1.46634 0.26236 1.09861 0.40547 61 2.91299 2.10687 2.56191 0.29181 61 U - - > 1.38629 1.38629 1.38629 1.38629 0.04261 3.87000 3.87000 1.46634 0.26236 1.09861 0.40547 62 3.04185 0.28479 2.75462 1.99182 62 C - - > 1.38629 1.38629 1.38629 1.38629 0.04261 3.87000 3.87000 1.46634 0.26236 1.09861 0.40547 63 0.15831 3.21951 2.94552 2.92133 63 A - - : 1.38629 1.38629 1.38629 1.38629 0.04261 3.87000 3.87000 1.46634 0.26236 1.09861 0.40547 64 0.15831 3.21951 2.94552 2.92133 64 A - - : 1.38629 1.38629 1.38629 1.38629 0.04261 3.87000 3.87000 1.46634 0.26236 1.09861 0.40547 65 0.15831 3.21951 2.94552 2.92133 65 A - - : 1.38629 1.38629 1.38629 1.38629 0.02153 3.84892 * 1.46634 0.26236 0.00000 * //