INFERNAL1/a [1.1.5 | Sep 2023] NAME mir-9412 ACC RF04266 DESC mir-9412 microRNA precursor family STATES 196 NODES 51 CLEN 64 W 80 ALPH RNA RF no CONS yes MAP yes DATE Wed Jul 10 08:12:44 2024 COM [1] /hps/software/users/agb/rfam/bin/cmbuild -F CM SEED COM [2] /hps/software/users/agb/rfam/bin/cmcalibrate --cpu 8 /nfs/production/agb/rfam/15/rescan/families/RF04266/CM PBEGIN 0.05 PEND 0.05 WBETA 1e-07 QDBBETA1 1e-07 QDBBETA2 1e-15 N2OMEGA 1.52588e-05 N3OMEGA 1.52588e-05 ELSELF -0.08926734 NSEQ 7 EFFN 1.603027 CKSUM 2444983865 NULL 0.000 0.000 0.000 0.000 GA 70.00 TC 70.30 NC 69.70 EFP7GF -8.1985 0.71907 ECMLC 0.61893 -6.65515 3.52213 1600000 652841 0.001838 ECMGC 0.43150 -15.60648 -1.07202 1600000 211738 0.001889 ECMLI 0.60266 -4.35016 4.80896 1600000 299507 0.004007 ECMGI 0.47461 -10.26865 1.91859 1600000 130052 0.003076 CM [ ROOT 0 ] - - - - - - S 0 -1 0 1 4 1 1 80 100 -6.808 -7.015 -0.168 -3.423 IL 1 1 2 1 4 1 18 84 104 -1.686 -2.369 -1.117 -4.855 0.000 0.000 0.000 0.000 IR 2 2 3 2 3 1 17 83 103 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 1 ] 1 - G - - - ML 3 2 3 5 3 1 17 80 100 -7.738 -0.024 -6.392 -1.099 -2.237 1.583 -1.621 D 4 2 3 5 3 0 13 79 99 -6.802 -0.853 -1.193 IL 5 5 3 5 3 1 16 82 102 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 2 ] 2 - A - - - ML 6 5 3 8 3 1 16 79 99 -7.835 -0.023 -6.489 1.656 -2.111 -1.770 -1.629 D 7 5 3 8 3 0 11 78 97 -6.174 -1.687 -0.566 IL 8 8 3 8 3 1 15 81 101 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 3 ] 3 - U - - - ML 9 8 3 11 3 1 15 78 98 -7.835 -0.023 -6.489 -1.250 -1.289 -1.970 1.543 D 10 8 3 11 3 0 10 76 96 -6.174 -1.687 -0.566 IL 11 11 3 11 3 1 15 80 100 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 4 ] 4 - G - - - ML 12 11 3 14 3 1 14 77 97 -7.835 -0.023 -6.489 -1.303 -2.477 1.651 -1.862 D 13 11 3 14 3 0 9 75 95 -6.174 -1.687 -0.566 IL 14 14 3 14 3 1 14 79 99 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 5 ] 5 - A - - - ML 15 14 3 17 3 1 14 76 96 -7.835 -0.023 -6.489 1.656 -2.111 -1.770 -1.629 D 16 14 3 17 3 0 9 74 94 -6.174 -1.687 -0.566 IL 17 17 3 17 3 1 13 78 98 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 6 ] 6 - A - - - ML 18 17 3 20 3 1 13 75 94 -8.234 -0.020 -6.551 1.656 -2.111 -1.770 -1.629 D 19 17 3 20 3 0 8 74 93 -5.620 -0.734 -1.403 IL 20 20 3 20 3 1 12 76 95 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 7 ] - 64 - u - - MR 21 20 3 23 3 1 12 74 93 -8.234 -0.020 -6.551 0.425 -0.745 -0.481 0.427 D 22 20 3 23 3 0 6 72 92 -6.390 -1.568 -0.620 IR 23 23 3 23 3 1 11 75 94 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 8 ] - 63 - g - - MR 24 23 3 26 3 1 12 73 92 -8.234 -0.020 -6.551 0.549 -1.316 0.611 -0.719 D 25 23 3 26 3 0 5 71 91 -6.390 -1.568 -0.620 IR 26 26 3 26 3 1 10 74 93 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 9 ] - 62 - G - - MR 27 26 3 29 3 1 11 72 91 -8.234 -0.020 -6.551 -0.276 -1.740 1.275 -1.138 D 28 26 3 29 3 0 4 70 90 -6.390 -1.568 -0.620 IR 29 29 3 29 3 1 9 73 92 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 10 ] - 61 - G - - MR 30 29 3 32 5 1 11 71 90 -6.981 -0.042 -6.796 -7.008 -7.900 -0.261 -1.730 1.267 -1.128 D 31 29 3 32 5 0 4 69 89 -5.352 -0.707 -2.978 -4.409 -2.404 IR 32 32 3 32 5 1 8 71 91 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 11 ] 7 60 U A - - MP 33 32 3 37 6 2 11 70 89 -9.056 -8.995 -0.022 -7.771 -8.051 -8.446 -3.927 -3.742 -3.793 -0.057 -2.794 -4.381 1.528 -3.470 -3.801 0.240 -4.187 -1.649 3.186 -4.087 -0.477 -2.650 ML 34 32 3 37 6 1 5 68 88 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 35 32 3 37 6 1 5 68 88 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 36 32 3 37 6 0 1 66 86 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 37 37 5 37 6 1 7 69 89 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 38 38 6 38 5 1 7 69 89 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 12 ] 8 59 g u - - MP 39 38 6 43 6 2 10 68 87 -9.056 -8.995 -0.022 -7.771 -8.051 -8.446 -3.455 -2.289 -3.608 1.227 -4.191 -4.921 0.170 -3.654 -3.316 1.575 -3.829 2.891 -0.191 -4.160 -1.770 -2.344 ML 40 38 6 43 6 1 5 66 86 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 41 38 6 43 6 1 4 66 86 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 42 38 6 43 6 0 1 64 84 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 43 43 5 43 6 1 6 67 87 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 44 44 6 44 5 1 6 67 87 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 13 ] 9 58 C G - - MP 45 44 6 49 6 2 8 66 85 -9.056 -8.995 -0.022 -7.771 -8.051 -8.446 -4.291 -4.172 -4.023 -0.429 -2.801 -4.468 3.462 -3.584 -4.065 -0.148 -4.352 -2.116 0.738 -4.376 -0.502 -2.914 ML 46 44 6 49 6 1 4 65 85 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 47 44 6 49 6 1 3 65 85 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 48 44 6 49 6 0 1 63 83 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 49 49 5 49 6 1 5 66 85 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 50 50 6 50 5 1 5 65 85 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 14 ] 10 57 U A - - MP 51 50 6 55 4 2 6 64 83 -6.808 -7.015 -0.059 -5.429 -3.927 -3.742 -3.793 -0.057 -2.794 -4.381 1.528 -3.470 -3.801 0.240 -4.187 -1.649 3.186 -4.087 -0.477 -2.650 ML 52 50 6 55 4 1 3 64 84 -3.758 -3.940 -0.507 -2.670 0.368 -0.385 -0.191 0.094 MR 53 50 6 55 4 1 2 64 83 -4.809 -3.838 -1.706 -0.766 0.368 -0.385 -0.191 0.094 D 54 50 6 55 4 0 0 62 82 -4.568 -4.250 -2.265 -0.520 IL 55 55 5 55 4 1 5 65 85 -1.686 -2.369 -1.117 -4.855 0.000 0.000 0.000 0.000 IR 56 56 6 56 3 1 5 64 84 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 15 ] 11 - A - - - ML 57 56 6 59 3 1 5 61 81 -7.835 -0.023 -6.489 1.656 -2.111 -1.770 -1.629 D 58 56 6 59 3 0 0 60 80 -6.174 -1.687 -0.566 IL 59 59 3 59 3 1 4 63 83 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 16 ] 12 - A - - - ML 60 59 3 62 3 1 5 60 80 -7.835 -0.023 -6.489 1.656 -2.111 -1.770 -1.629 D 61 59 3 62 3 0 0 59 79 -6.174 -1.687 -0.566 IL 62 62 3 62 3 1 3 62 82 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 17 ] 13 - A - - - ML 63 62 3 65 3 1 4 59 79 -7.835 -0.023 -6.489 1.656 -2.111 -1.770 -1.629 D 64 62 3 65 3 0 0 58 77 -6.174 -1.687 -0.566 IL 65 65 3 65 3 1 3 61 81 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 18 ] 14 - G - - - ML 66 65 3 68 3 1 3 58 78 -7.835 -0.023 -6.489 -1.303 -2.477 1.651 -1.862 D 67 65 3 68 3 0 0 57 76 -6.174 -1.687 -0.566 IL 68 68 3 68 3 1 2 60 80 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 19 ] 15 - A - - - ML 69 68 3 71 3 1 3 57 76 -8.234 -0.020 -6.551 1.656 -2.111 -1.770 -1.629 D 70 68 3 71 3 0 0 56 75 -5.620 -0.734 -1.403 IL 71 71 3 71 3 1 1 58 77 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 20 ] - 56 - C - - MR 72 71 3 74 3 1 2 56 75 -8.234 -0.020 -6.551 -1.431 1.529 -2.242 -0.909 D 73 71 3 74 3 0 0 54 74 -6.390 -1.568 -0.620 IR 74 74 3 74 3 1 1 57 76 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 21 ] - 55 - A - - MR 75 74 3 77 3 1 2 55 74 -8.234 -0.020 -6.551 1.656 -2.111 -1.770 -1.629 D 76 74 3 77 3 0 0 53 73 -6.390 -1.568 -0.620 IR 77 77 3 77 3 1 1 56 75 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 22 ] - 54 - A - - MR 78 77 3 80 3 1 2 54 73 -8.234 -0.020 -6.551 1.656 -2.111 -1.770 -1.629 D 79 77 3 80 3 0 0 52 72 -6.390 -1.568 -0.620 IR 80 80 3 80 3 1 1 55 74 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 23 ] - 53 - G - - MR 81 80 3 83 3 1 1 53 72 -8.234 -0.020 -6.551 -1.303 -2.477 1.651 -1.862 D 82 80 3 83 3 0 0 51 71 -6.390 -1.568 -0.620 IR 83 83 3 83 3 1 1 54 73 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 24 ] - 52 - A - - MR 84 83 3 86 5 1 1 52 71 -6.981 -0.042 -6.796 -7.008 -7.900 1.656 -2.111 -1.770 -1.629 D 85 83 3 86 5 0 0 51 70 -5.352 -0.707 -2.978 -4.409 -2.404 IR 86 86 3 86 5 1 1 52 72 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 25 ] 16 51 C G - - MP 87 86 3 91 6 2 2 51 70 -9.056 -8.995 -0.022 -7.771 -8.051 -8.446 -3.437 -3.477 -3.380 0.073 0.417 -3.990 3.048 -3.168 -3.416 0.229 -3.827 -1.643 1.080 -3.626 -0.245 -2.363 ML 88 86 3 91 6 1 1 50 70 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 89 86 3 91 6 1 1 50 70 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 90 86 3 91 6 0 0 48 68 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 91 91 5 91 6 1 1 51 70 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 92 92 6 92 5 1 1 50 70 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 26 ] 17 50 U A - - MP 93 92 6 97 4 2 2 49 68 -6.808 -7.015 -0.059 -5.429 -3.927 -3.742 -3.793 -0.057 -2.794 -4.381 1.528 -3.470 -3.801 0.240 -4.187 -1.649 3.186 -4.087 -0.477 -2.650 ML 94 92 6 97 4 1 1 49 69 -3.758 -3.940 -0.507 -2.670 0.368 -0.385 -0.191 0.094 MR 95 92 6 97 4 1 1 49 69 -4.809 -3.838 -1.706 -0.766 0.368 -0.385 -0.191 0.094 D 96 92 6 97 4 0 0 48 68 -4.568 -4.250 -2.265 -0.520 IL 97 97 5 97 4 1 1 51 70 -1.686 -2.369 -1.117 -4.855 0.000 0.000 0.000 0.000 IR 98 98 6 98 3 1 1 50 69 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 27 ] 18 - G - - - ML 99 98 6 101 3 1 1 46 66 -7.835 -0.023 -6.489 -1.303 -2.477 1.651 -1.862 D 100 98 6 101 3 0 0 45 64 -6.174 -1.687 -0.566 IL 101 101 3 101 3 1 1 49 68 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 28 ] 19 - G - - - ML 102 101 3 104 3 1 1 45 64 -8.234 -0.020 -6.551 -1.303 -2.477 1.651 -1.862 D 103 101 3 104 3 0 0 44 63 -5.620 -0.734 -1.403 IL 104 104 3 104 3 1 1 46 65 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 29 ] - 49 - A - - MR 105 104 3 107 3 1 1 44 63 -8.234 -0.020 -6.551 1.656 -2.111 -1.770 -1.629 D 106 104 3 107 3 0 0 43 62 -6.390 -1.568 -0.620 IR 107 107 3 107 3 1 1 45 64 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 30 ] - 48 - G - - MR 108 107 3 110 5 1 1 43 62 -6.981 -0.042 -6.796 -7.008 -7.900 -1.303 -2.477 1.651 -1.862 D 109 107 3 110 5 0 0 42 61 -5.352 -0.707 -2.978 -4.409 -2.404 IR 110 110 3 110 5 1 1 44 63 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 31 ] 20 47 A U - - MP 111 110 3 115 6 2 2 42 61 -9.056 -8.995 -0.022 -7.771 -8.051 -8.446 -3.584 -2.671 -3.616 3.178 -3.853 -4.899 0.434 -3.671 -3.518 1.303 -4.055 -0.183 0.015 -4.120 -1.509 -2.464 ML 112 110 3 115 6 1 1 41 60 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 113 110 3 115 6 1 1 41 60 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 114 110 3 115 6 0 0 38 58 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 115 115 5 115 6 1 1 42 61 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 116 116 6 116 5 1 1 42 61 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 32 ] 21 46 A U - - MP 117 116 6 121 6 2 2 40 59 -9.056 -8.995 -0.022 -7.771 -8.051 -8.446 -3.584 -2.671 -3.616 3.178 -3.853 -4.899 0.434 -3.671 -3.518 1.303 -4.055 -0.183 0.015 -4.120 -1.509 -2.464 ML 118 116 6 121 6 1 1 39 58 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 119 116 6 121 6 1 1 39 58 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 120 116 6 121 6 0 0 36 56 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 121 121 5 121 6 1 1 40 59 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 122 122 6 122 5 1 1 40 59 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 33 ] 22 45 G C - - MP 123 122 6 127 6 2 2 38 57 -9.056 -8.995 -0.022 -7.771 -8.051 -8.446 -4.492 -2.976 -4.571 0.364 -4.880 -4.594 -0.306 -4.793 -4.160 3.572 -4.515 -0.667 -0.699 -4.303 -2.330 -3.452 ML 124 122 6 127 6 1 1 37 56 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 125 122 6 127 6 1 1 37 56 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 126 122 6 127 6 0 0 34 54 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 127 127 5 127 6 1 1 38 57 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 128 128 6 128 5 1 1 38 57 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 34 ] 23 44 A U - - MP 129 128 6 133 6 2 2 36 55 -9.056 -8.995 -0.022 -7.771 -8.051 -8.446 -3.584 -2.671 -3.616 3.178 -3.853 -4.899 0.434 -3.671 -3.518 1.303 -4.055 -0.183 0.015 -4.120 -1.509 -2.464 ML 130 128 6 133 6 1 1 35 54 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 131 128 6 133 6 1 1 35 54 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 132 128 6 133 6 0 0 32 52 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 133 133 5 133 6 1 1 36 55 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 134 134 6 134 5 1 1 36 55 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 35 ] 24 43 C G - - MP 135 134 6 139 6 2 2 34 53 -9.056 -8.995 -0.022 -7.771 -8.051 -8.446 -4.291 -4.172 -4.023 -0.429 -2.801 -4.468 3.462 -3.584 -4.065 -0.148 -4.352 -2.116 0.738 -4.376 -0.502 -2.914 ML 136 134 6 139 6 1 1 33 52 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 137 134 6 139 6 1 1 33 52 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 138 134 6 139 6 0 0 30 50 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 139 139 5 139 6 1 1 34 53 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 140 140 6 140 5 1 1 34 53 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 36 ] 25 42 A U - - MP 141 140 6 145 6 2 2 32 51 -9.056 -8.995 -0.022 -7.771 -8.051 -8.446 -3.584 -2.671 -3.616 3.178 -3.853 -4.899 0.434 -3.671 -3.518 1.303 -4.055 -0.183 0.015 -4.120 -1.509 -2.464 ML 142 140 6 145 6 1 1 31 50 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 143 140 6 145 6 1 1 31 50 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 144 140 6 145 6 0 0 29 48 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 145 145 5 145 6 1 1 32 51 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 146 146 6 146 5 1 1 32 51 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 37 ] 26 41 U A - - MP 147 146 6 151 6 2 2 30 49 -9.056 -8.995 -0.022 -7.771 -8.051 -8.446 -3.927 -3.742 -3.793 -0.057 -2.794 -4.381 1.528 -3.470 -3.801 0.240 -4.187 -1.649 3.186 -4.087 -0.477 -2.650 ML 148 146 6 151 6 1 1 29 48 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 149 146 6 151 6 1 1 29 48 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 150 146 6 151 6 0 0 27 46 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 151 151 5 151 6 1 1 30 49 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 152 152 6 152 5 1 1 30 49 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 38 ] 27 40 G C - - MP 153 152 6 157 6 2 2 28 47 -9.056 -8.995 -0.022 -7.771 -8.051 -8.446 -4.492 -2.976 -4.571 0.364 -4.880 -4.594 -0.306 -4.793 -4.160 3.572 -4.515 -0.667 -0.699 -4.303 -2.330 -3.452 ML 154 152 6 157 6 1 1 28 47 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 155 152 6 157 6 1 1 27 47 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 156 152 6 157 6 0 0 26 45 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 157 157 5 157 6 1 1 28 47 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 158 158 6 158 5 1 1 28 47 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 39 ] 28 39 G C - - MP 159 158 6 163 4 2 2 26 45 -6.808 -7.015 -0.059 -5.429 -3.669 -2.558 -3.698 1.568 -4.099 -4.363 0.363 -3.982 -3.648 3.113 -4.076 -0.202 0.040 -3.735 -1.614 -2.601 ML 160 158 6 163 4 1 1 27 46 -3.758 -3.940 -0.507 -2.670 0.368 -0.385 -0.191 0.094 MR 161 158 6 163 4 1 1 26 46 -4.809 -3.838 -1.706 -0.766 0.368 -0.385 -0.191 0.094 D 162 158 6 163 4 0 0 25 45 -4.568 -4.250 -2.265 -0.520 IL 163 163 5 163 4 1 1 28 48 -1.686 -2.369 -1.117 -4.855 0.000 0.000 0.000 0.000 IR 164 164 6 164 3 1 1 27 46 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 40 ] 29 - G - - - ML 165 164 6 167 3 1 1 24 42 -7.835 -0.023 -6.489 -0.616 -1.456 1.193 -0.521 D 166 164 6 167 3 0 0 23 42 -6.174 -1.687 -0.566 IL 167 167 3 167 3 1 1 26 45 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 41 ] 30 - A - - - ML 168 167 3 170 3 1 1 22 41 -7.835 -0.023 -6.489 1.656 -2.111 -1.770 -1.629 D 169 167 3 170 3 0 0 21 40 -6.174 -1.687 -0.566 IL 170 170 3 170 3 1 1 25 44 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 42 ] 31 - A - - - ML 171 170 3 173 3 1 1 21 40 -7.835 -0.122 -3.705 1.656 -2.111 -1.770 -1.629 D 172 170 3 173 3 0 0 20 39 -6.174 -1.687 -0.566 IL 173 173 3 173 3 1 1 24 43 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 43 ] 32 - U - - - ML 174 173 3 176 3 1 1 20 39 -7.737 -0.024 -6.391 -1.079 -1.149 -1.787 1.478 D 175 173 3 176 3 0 0 19 38 -6.810 -2.323 -0.338 IL 176 176 3 176 3 1 1 23 42 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 44 ] 33 - U - - - ML 177 176 3 179 3 1 1 19 38 -7.737 -0.024 -6.391 -1.079 -1.149 -1.787 1.478 D 178 176 3 179 3 0 0 18 37 -6.810 -2.323 -0.338 IL 179 179 3 179 3 1 1 22 41 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 45 ] 34 - A - - - ML 180 179 3 182 3 1 1 18 36 -7.737 -0.024 -6.391 1.600 -1.919 -1.597 -1.420 D 181 179 3 182 3 0 0 17 35 -6.810 -0.846 -1.202 IL 182 182 3 182 3 1 1 21 40 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 46 ] 35 - A - - - ML 183 182 3 185 3 1 1 16 35 -7.835 -0.023 -6.489 1.656 -2.111 -1.770 -1.629 D 184 182 3 185 3 0 0 16 34 -6.174 -1.687 -0.566 IL 185 185 3 185 3 1 1 20 38 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 47 ] 36 - A - - - ML 186 185 3 188 3 1 1 15 33 -7.835 -0.023 -6.489 1.656 -2.111 -1.770 -1.629 D 187 185 3 188 3 0 0 15 33 -6.174 -1.687 -0.566 IL 188 188 3 188 3 1 1 19 37 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 48 ] 37 - A - - - ML 189 188 3 191 3 1 1 13 32 -7.835 -0.023 -6.489 1.656 -2.111 -1.770 -1.629 D 190 188 3 191 3 0 0 13 32 -6.174 -1.687 -0.566 IL 191 191 3 191 3 1 1 18 36 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 49 ] 38 - A - - - ML 192 191 3 194 2 1 1 1 1 * 0.000 1.656 -2.111 -1.770 -1.629 D 193 191 3 194 2 0 0 0 0 * 0.000 IL 194 194 3 194 2 1 1 13 28 -1.823 -0.479 0.000 0.000 0.000 0.000 [ END 50 ] - - - - - - E 195 194 3 -1 0 0 0 0 0 // HMMER3/f [3.4 | Aug 2023] NAME mir-9412 ACC RF04266 DESC mir-9412 microRNA precursor family LENG 64 MAXL 150 ALPH RNA RF no MM no CONS yes CS yes MAP yes DATE Wed Jul 10 08:12:44 2024 COM [1] /hps/software/users/agb/rfam/bin/cmbuild -F CM SEED COM [2] /hps/software/users/agb/rfam/bin/cmcalibrate --cpu 8 /nfs/production/agb/rfam/15/rescan/families/RF04266/CM NSEQ 7 EFFN 2.136230 CKSUM 2444983865 STATS LOCAL MSV -8.3617 0.71907 STATS LOCAL VITERBI -8.7674 0.71907 STATS LOCAL FORWARD -3.1192 0.71907 HMM A C G U m->m m->i m->d i->m i->i d->m d->d COMPO 0.99246 1.88143 1.30848 1.57633 1.38629 1.38629 1.38629 1.38629 0.12420 3.85274 2.34784 1.46634 0.26236 0.00000 * 1 2.42996 3.26748 0.20389 2.84213 1 G - - : 1.38629 1.38629 1.38629 1.38629 0.04694 3.77548 3.77548 1.46634 0.26236 0.36747 1.17923 2 0.17305 3.13781 2.87192 2.83132 2 A - - : 1.38629 1.38629 1.38629 1.38629 0.04337 3.85274 3.85274 1.46634 0.26236 1.09861 0.40547 3 2.51534 2.49553 3.02868 0.23784 3 U - - : 1.38629 1.38629 1.38629 1.38629 0.04337 3.85274 3.85274 1.46634 0.26236 1.09861 0.40547 4 2.59511 3.45804 0.16756 3.03346 4 G - - : 1.38629 1.38629 1.38629 1.38629 0.04337 3.85274 3.85274 1.46634 0.26236 1.09861 0.40547 5 0.17305 3.13781 2.87192 2.83132 5 A - - : 1.38629 1.38629 1.38629 1.38629 0.04337 3.85274 3.85274 1.46634 0.26236 1.09861 0.40547 6 0.17305 3.13781 2.87192 2.83132 6 A - - : 1.38629 1.38629 1.38629 1.38629 0.04337 3.85274 3.85274 1.46634 0.26236 1.09861 0.40547 7 2.85515 1.82107 2.59454 0.34825 7 U - - < 1.38629 1.38629 1.38629 1.38629 0.04337 3.85274 3.85274 1.46634 0.26236 1.09861 0.40547 8 1.87456 2.79466 0.33351 2.67313 8 G - - < 1.38629 1.38629 1.38629 1.38629 0.04337 3.85274 3.85274 1.46634 0.26236 1.09861 0.40547 9 3.09375 0.26671 2.85552 2.03068 9 C - - < 1.38629 1.38629 1.38629 1.38629 0.04337 3.85274 3.85274 1.46634 0.26236 1.09861 0.40547 10 2.85844 1.82120 2.59591 0.34781 10 U - - < 1.38629 1.38629 1.38629 1.38629 0.04337 3.85274 3.85274 1.46634 0.26236 1.09861 0.40547 11 0.17305 3.13781 2.87192 2.83132 11 A - - - 1.38629 1.38629 1.38629 1.38629 0.04337 3.85274 3.85274 1.46634 0.26236 1.09861 0.40547 12 0.17305 3.13781 2.87192 2.83132 12 A - - - 1.38629 1.38629 1.38629 1.38629 0.04337 3.85274 3.85274 1.46634 0.26236 1.09861 0.40547 13 0.17305 3.13781 2.87192 2.83132 13 A - - - 1.38629 1.38629 1.38629 1.38629 0.04337 3.85274 3.85274 1.46634 0.26236 1.09861 0.40547 14 2.59511 3.45804 0.16756 3.03346 14 G - - - 1.38629 1.38629 1.38629 1.38629 0.04337 3.85274 3.85274 1.46634 0.26236 1.09861 0.40547 15 0.17305 3.13781 2.87192 2.83132 15 A - - - 1.38629 1.38629 1.38629 1.38629 0.04337 3.85274 3.85274 1.46634 0.26236 1.09861 0.40547 16 2.61690 0.42522 2.42833 1.68652 16 C - - < 1.38629 1.38629 1.38629 1.38629 0.04337 3.85274 3.85274 1.46634 0.26236 1.09861 0.40547 17 2.85777 1.82117 2.59563 0.34790 17 U - - < 1.38629 1.38629 1.38629 1.38629 0.04337 3.85274 3.85274 1.46634 0.26236 1.09861 0.40547 18 2.59511 3.45804 0.16756 3.03346 18 G - - - 1.38629 1.38629 1.38629 1.38629 0.04337 3.85274 3.85274 1.46634 0.26236 1.09861 0.40547 19 2.59511 3.45804 0.16756 3.03346 19 G - - - 1.38629 1.38629 1.38629 1.38629 0.04337 3.85274 3.85274 1.46634 0.26236 1.09861 0.40547 20 0.38659 2.64988 1.74498 2.58595 20 A - - < 1.38629 1.38629 1.38629 1.38629 0.04337 3.85274 3.85274 1.46634 0.26236 1.09861 0.40547 21 0.38633 2.65073 1.74511 2.58721 21 A - - < 1.38629 1.38629 1.38629 1.38629 0.04337 3.85274 3.85274 1.46634 0.26236 1.09861 0.40547 22 2.52075 3.13592 0.18627 3.07719 22 G - - < 1.38629 1.38629 1.38629 1.38629 0.04337 3.85274 3.85274 1.46634 0.26236 1.09861 0.40547 23 0.38631 2.65081 1.74512 2.58733 23 A - - < 1.38629 1.38629 1.38629 1.38629 0.04337 3.85274 3.85274 1.46634 0.26236 1.09861 0.40547 24 3.09314 0.26678 2.85524 2.03057 24 C - - < 1.38629 1.38629 1.38629 1.38629 0.04337 3.85274 3.85274 1.46634 0.26236 1.09861 0.40547 25 0.38644 2.65037 1.74505 2.58668 25 A - - < 1.38629 1.38629 1.38629 1.38629 0.04337 3.85274 3.85274 1.46634 0.26236 1.09861 0.40547 26 2.85692 1.82114 2.59528 0.34802 26 U - - < 1.38629 1.38629 1.38629 1.38629 0.04337 3.85274 3.85274 1.46634 0.26236 1.09861 0.40547 27 2.51907 3.13402 0.18668 3.07452 27 G - - < 1.38629 1.38629 1.38629 1.38629 0.04337 3.85274 3.85274 1.46634 0.26236 1.09861 0.40547 28 1.55547 2.55778 0.47040 2.44549 28 G - - < 1.38629 1.38629 1.38629 1.38629 0.04337 3.85274 3.85274 1.46634 0.26236 1.09861 0.40547 29 1.96515 2.56154 0.46980 1.84801 29 G - - _ 1.38629 1.38629 1.38629 1.38629 0.04337 3.85274 3.85274 1.46634 0.26236 1.09861 0.40547 30 0.17305 3.13781 2.87192 2.83132 30 A - - _ 1.38629 1.38629 1.38629 1.38629 0.04337 3.85274 3.85274 1.46634 0.26236 1.09861 0.40547 31 0.17305 3.13781 2.87192 2.83132 31 A - - _ 1.38629 1.38629 1.38629 1.38629 0.12557 3.85274 2.33525 1.46634 0.26236 1.09861 0.40547 32 2.36898 2.37479 2.87503 0.27842 32 U - - _ 1.38629 1.38629 1.38629 1.38629 0.04700 3.77417 3.77417 1.46634 0.26236 1.88111 0.16537 33 2.36898 2.37479 2.87503 0.27842 33 U - - _ 1.38629 1.38629 1.38629 1.38629 0.04700 3.77417 3.77417 1.46634 0.26236 1.88111 0.16537 34 0.20626 2.97852 2.72859 2.65636 34 A - - _ 1.38629 1.38629 1.38629 1.38629 0.04700 3.77417 3.77417 1.46634 0.26236 0.36362 1.18796 35 0.17305 3.13781 2.87192 2.83132 35 A - - _ 1.38629 1.38629 1.38629 1.38629 0.04337 3.85274 3.85274 1.46634 0.26236 1.09861 0.40547 36 0.17305 3.13781 2.87192 2.83132 36 A - - _ 1.38629 1.38629 1.38629 1.38629 0.04337 3.85274 3.85274 1.46634 0.26236 1.09861 0.40547 37 0.17305 3.13781 2.87192 2.83132 37 A - - _ 1.38629 1.38629 1.38629 1.38629 0.04337 3.85274 3.85274 1.46634 0.26236 1.09861 0.40547 38 0.17305 3.13781 2.87192 2.83132 38 A - - _ 1.38629 1.38629 1.38629 1.38629 0.04337 3.85274 3.85274 1.46634 0.26236 1.09861 0.40547 39 2.67821 0.53966 2.37413 1.36543 39 C - - > 1.38629 1.38629 1.38629 1.38629 0.04337 3.85274 3.85274 1.46634 0.26236 1.09861 0.40547 40 3.28046 0.22019 2.96696 2.22041 40 C - - > 1.38629 1.38629 1.38629 1.38629 0.04337 3.85274 3.85274 1.46634 0.26236 1.09861 0.40547 41 0.39514 2.77735 1.65804 2.60781 41 A - - > 1.38629 1.38629 1.38629 1.38629 0.04337 3.85274 3.85274 1.46634 0.26236 1.09861 0.40547 42 2.81485 2.02743 2.46341 0.32397 42 U - - > 1.38629 1.38629 1.38629 1.38629 0.04337 3.85274 3.85274 1.46634 0.26236 1.09861 0.40547 43 2.30728 3.02304 0.23058 2.85177 43 G - - > 1.38629 1.38629 1.38629 1.38629 0.04337 3.85274 3.85274 1.46634 0.26236 1.09861 0.40547 44 2.81720 2.02768 2.46425 0.32364 44 U - - > 1.38629 1.38629 1.38629 1.38629 0.04337 3.85274 3.85274 1.46634 0.26236 1.09861 0.40547 45 3.29007 0.21923 2.97108 2.22225 45 C - - > 1.38629 1.38629 1.38629 1.38629 0.04337 3.85274 3.85274 1.46634 0.26236 1.09861 0.40547 46 2.82103 2.02807 2.46562 0.32309 46 U - - > 1.38629 1.38629 1.38629 1.38629 0.04337 3.85274 3.85274 1.46634 0.26236 1.09861 0.40547 47 2.82391 2.02837 2.46665 0.32268 47 U - - > 1.38629 1.38629 1.38629 1.38629 0.04337 3.85274 3.85274 1.46634 0.26236 1.09861 0.40547 48 2.59511 3.45804 0.16756 3.03346 48 G - - - 1.38629 1.38629 1.38629 1.38629 0.04337 3.85274 3.85274 1.46634 0.26236 1.09861 0.40547 49 0.17305 3.13781 2.87192 2.83132 49 A - - - 1.38629 1.38629 1.38629 1.38629 0.04337 3.85274 3.85274 1.46634 0.26236 1.09861 0.40547 50 0.39434 2.78051 1.65827 2.61180 50 A - - > 1.38629 1.38629 1.38629 1.38629 0.04337 3.85274 3.85274 1.46634 0.26236 1.09861 0.40547 51 1.43591 2.59581 0.51593 2.40161 51 G - - > 1.38629 1.38629 1.38629 1.38629 0.04337 3.85274 3.85274 1.46634 0.26236 1.09861 0.40547 52 0.17305 3.13781 2.87192 2.83132 52 A - - - 1.38629 1.38629 1.38629 1.38629 0.04337 3.85274 3.85274 1.46634 0.26236 1.09861 0.40547 53 2.59511 3.45804 0.16756 3.03346 53 G - - - 1.38629 1.38629 1.38629 1.38629 0.04337 3.85274 3.85274 1.46634 0.26236 1.09861 0.40547 54 0.17305 3.13781 2.87192 2.83132 54 A - - - 1.38629 1.38629 1.38629 1.38629 0.04337 3.85274 3.85274 1.46634 0.26236 1.09861 0.40547 55 0.17305 3.13781 2.87192 2.83132 55 A - - - 1.38629 1.38629 1.38629 1.38629 0.04337 3.85274 3.85274 1.46634 0.26236 1.09861 0.40547 56 2.72328 0.22796 3.29763 2.29052 56 C - - - 1.38629 1.38629 1.38629 1.38629 0.04337 3.85274 3.85274 1.46634 0.26236 1.09861 0.40547 57 0.39478 2.77877 1.65814 2.60960 57 A - - > 1.38629 1.38629 1.38629 1.38629 0.04337 3.85274 3.85274 1.46634 0.26236 1.09861 0.40547 58 2.30868 3.02487 0.23013 2.85403 58 G - - > 1.38629 1.38629 1.38629 1.38629 0.04337 3.85274 3.85274 1.46634 0.26236 1.09861 0.40547 59 2.89242 1.82339 2.59814 0.34437 59 U - - > 1.38629 1.38629 1.38629 1.38629 0.04337 3.85274 3.85274 1.46634 0.26236 1.09861 0.40547 60 0.39401 2.78186 1.65836 2.61350 60 A - - > 1.38629 1.38629 1.38629 1.38629 0.04337 3.85274 3.85274 1.46634 0.26236 1.09861 0.40547 61 1.65240 2.77687 0.42663 2.37007 61 G - - : 1.38629 1.38629 1.38629 1.38629 0.04337 3.85274 3.85274 1.46634 0.26236 1.09861 0.40547 62 1.66541 2.78566 0.42077 2.37885 62 G - - : 1.38629 1.38629 1.38629 1.38629 0.04337 3.85274 3.85274 1.46634 0.26236 1.09861 0.40547 63 0.98651 2.42501 0.90249 2.01674 63 g - - : 1.38629 1.38629 1.38629 1.38629 0.04337 3.85274 3.85274 1.46634 0.26236 1.09861 0.40547 64 1.07742 1.95575 1.73101 1.07598 64 u - - : 1.38629 1.38629 1.38629 1.38629 0.02192 3.83129 * 1.46634 0.26236 0.00000 * //