INFERNAL1/a [1.1.4 | Dec 2020] NAME MIR169_6 ACC RF04244 DESC MIR169_6 microRNA precursor family STATES 301 NODES 75 CLEN 99 W 124 ALPH RNA RF no CONS yes MAP yes DATE Mon Jun 12 13:59:20 2023 COM [1] /hps/software/users/agb/rfam/bin/cmbuild -F CM SEED COM [2] /hps/software/users/agb/rfam/bin/cmcalibrate --cpu 8 /homes/nancyontiveros/NEW/MIPF0001058__MIR169_6/CM PBEGIN 0.05 PEND 0.05 WBETA 1e-07 QDBBETA1 1e-07 QDBBETA2 1e-15 N2OMEGA 1.52588e-05 N3OMEGA 1.52588e-05 ELSELF -0.08926734 NSEQ 8 EFFN 1.535156 CKSUM 2957209510 NULL 0.000 0.000 0.000 0.000 GA 54.00 TC 54.90 NC 53.60 EFP7GF -7.0325 0.71872 ECMLC 0.69237 -4.83440 2.99513 1600000 271313 0.004423 ECMGC 0.46976 -13.20203 -2.41432 1600000 63520 0.006297 ECMLI 0.65068 -3.10375 4.61927 1600000 182644 0.006570 ECMGI 0.51750 -6.84301 2.32491 1600000 45974 0.008701 CM [ ROOT 0 ] - - - - - - S 0 -1 0 1 4 1 1 124 156 -6.777 -6.984 -0.378 -2.227 IL 1 1 2 1 4 1 34 127 159 -1.686 -2.369 -1.117 -4.855 0.000 0.000 0.000 0.000 IR 2 2 3 2 3 1 34 126 158 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 1 ] 1 - A - - - ML 3 2 3 5 3 1 33 124 156 -7.529 -0.028 -6.183 1.449 -1.527 -1.241 -0.999 D 4 2 3 5 3 0 29 122 154 -7.466 -1.617 -0.581 IL 5 5 3 5 3 1 33 125 157 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 2 ] 2 - G - - - ML 6 5 3 8 3 1 32 123 155 -8.043 -0.023 -6.361 -0.872 -1.964 1.488 -1.349 D 7 5 3 8 3 0 28 122 154 -6.284 -0.418 -2.067 IL 8 8 3 8 3 1 31 124 156 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 3 ] - 113 - u - - MR 9 8 3 11 3 1 31 122 154 -8.207 -0.021 -6.525 -0.581 0.373 -1.342 0.716 D 10 8 3 11 3 0 25 120 152 -6.390 -1.568 -0.620 IR 11 11 3 11 3 1 30 123 155 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 4 ] - 112 - C - - MR 12 11 3 14 5 1 31 121 153 -6.956 -0.199 -6.772 -3.216 -7.875 -0.369 1.057 -1.445 -0.363 D 13 11 3 14 5 0 24 120 152 -5.352 -0.707 -2.978 -4.409 -2.404 IR 14 14 3 14 5 1 29 122 153 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 5 ] 3 111 a u - - MP 15 14 3 19 6 2 32 120 152 -8.979 -8.918 -0.023 -7.694 -7.974 -8.369 -3.310 -2.476 -3.355 2.882 -3.456 -4.490 0.819 -3.420 -3.274 1.610 -3.796 -0.043 0.395 -3.756 -1.128 -2.224 ML 16 14 3 19 6 1 25 119 150 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 17 14 3 19 6 1 25 118 150 -7.566 -6.295 -1.377 -6.273 -0.890 -4.487 -0.245 -0.531 -0.872 0.939 D 18 14 3 19 6 0 19 115 147 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 19 19 5 19 6 1 28 120 152 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 20 20 6 20 5 1 28 120 151 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 6 ] 4 110 G C - - MP 21 20 6 25 6 2 30 118 150 -9.013 -8.952 -0.023 -7.728 -8.008 -8.403 -3.676 -2.534 -3.726 0.953 -4.165 -4.326 0.278 -4.019 -3.630 3.175 -4.055 0.729 -0.026 -3.733 -1.690 -2.634 ML 22 20 6 25 6 1 25 117 148 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 23 20 6 25 6 1 24 116 148 -7.301 -6.030 -1.939 -6.008 -0.625 -4.222 0.010 0.357 -0.684 0.124 D 24 20 6 25 6 0 18 113 145 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 25 25 5 25 6 1 27 118 150 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 26 26 6 26 5 1 27 118 149 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 7 ] 5 109 u g - - MP 27 26 6 31 6 2 29 116 148 -9.013 -8.952 -0.023 -7.728 -8.008 -8.403 -3.618 -3.516 -3.426 0.101 -2.344 -3.932 1.927 -3.067 -3.463 0.381 -3.805 -1.531 1.152 -3.746 2.628 -2.359 ML 28 26 6 31 6 1 24 115 146 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 29 26 6 31 6 1 23 114 146 -7.301 -6.030 -1.939 -6.008 -0.625 -4.222 0.119 -0.758 0.554 -0.227 D 30 26 6 31 6 0 18 112 143 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 31 31 5 31 6 1 26 116 148 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 32 32 6 32 5 1 26 116 147 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 8 ] 6 108 a u - - MP 33 32 6 37 6 2 27 114 146 -9.013 -8.952 -0.023 -7.728 -8.008 -8.403 -3.093 -2.219 -3.199 2.313 -3.590 -4.333 0.622 -3.387 -3.109 1.851 -3.635 1.593 0.339 -3.525 -1.275 -2.080 ML 34 32 6 37 6 1 23 113 145 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 35 32 6 37 6 1 22 112 144 -7.301 -6.030 -1.939 -6.008 -0.625 -4.222 -0.011 -0.413 -0.613 0.680 D 36 32 6 37 6 0 17 110 142 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 37 37 5 37 6 1 24 114 146 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 38 38 6 38 5 1 24 114 145 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 9 ] 7 107 c g - - MP 39 38 6 43 6 2 25 112 144 -5.318 -8.952 -0.057 -7.728 -8.008 -8.403 -2.062 -2.095 -2.223 1.095 -1.073 -3.045 1.902 -2.443 -2.269 1.317 -2.812 0.437 1.423 -2.354 -0.034 -0.716 ML 40 38 6 43 6 1 22 111 143 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 41 38 6 43 6 1 20 111 143 -7.301 -6.030 -1.133 -6.008 -1.142 -4.222 -0.011 -0.413 -0.613 0.680 D 42 38 6 43 6 0 17 109 140 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 43 43 5 43 6 1 23 112 144 -2.857 -3.120 -0.595 -4.776 -5.552 -5.212 0.000 0.000 0.000 0.000 IR 44 44 6 44 5 1 23 112 143 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 10 ] 9 106 a u - - MP 45 44 6 49 4 2 23 110 142 -6.777 -6.984 -0.060 -5.398 -2.537 -2.331 -2.645 2.104 -2.485 -3.462 1.469 -2.843 -2.712 1.577 -3.225 -0.415 1.130 -2.776 0.097 -0.741 ML 46 44 6 49 4 1 20 110 142 -3.758 -3.940 -0.507 -2.670 0.368 -0.385 -0.191 0.094 MR 47 44 6 49 4 1 18 109 141 -4.809 -3.838 -1.706 -0.766 0.368 -0.385 -0.191 0.094 D 48 44 6 49 4 0 16 108 140 -4.568 -4.250 -2.265 -0.520 IL 49 49 5 49 4 1 22 111 143 -1.686 -2.369 -1.117 -4.855 0.000 0.000 0.000 0.000 IR 50 50 6 50 3 1 22 110 142 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 11 ] 10 - U - - - ML 51 50 6 53 3 1 21 108 140 -7.806 -0.023 -6.460 -1.199 -1.247 -1.916 1.525 D 52 50 6 53 3 0 16 107 138 -6.174 -1.687 -0.566 IL 53 53 3 53 3 1 21 109 141 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 12 ] 11 - U - - - ML 54 53 3 56 3 1 21 107 139 -8.207 -0.021 -6.525 -1.199 -1.247 -1.916 1.525 D 55 53 3 56 3 0 15 106 138 -5.620 -0.734 -1.403 IL 56 56 3 56 3 1 19 108 140 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 13 ] - 105 - a - - MR 57 56 3 59 3 1 20 106 138 -8.207 -0.021 -6.525 0.728 -0.828 -0.967 0.344 D 58 56 3 59 3 0 12 104 136 -6.390 -1.568 -0.620 IR 59 59 3 59 3 1 18 107 139 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 14 ] - 104 - U - - MR 60 59 3 62 5 1 20 105 137 -6.956 -0.043 -6.772 -6.984 -7.875 -0.653 -0.133 -1.392 1.050 D 61 59 3 62 5 0 11 104 136 -5.352 -0.707 -2.978 -4.409 -2.404 IR 62 62 3 62 5 1 16 105 137 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 15 ] 12 103 U A - - MP 63 62 3 67 6 2 20 104 136 -9.044 -8.984 -0.022 -7.760 -8.040 -8.435 -3.873 -3.685 -3.745 -0.005 -2.758 -4.337 1.562 -3.430 -3.753 0.303 -4.142 -1.594 3.151 -4.035 -0.442 -2.607 ML 64 62 3 67 6 1 13 103 134 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 65 62 3 67 6 1 13 102 134 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 66 62 3 67 6 0 8 99 131 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 67 67 5 67 6 1 15 104 136 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 68 68 6 68 5 1 16 103 135 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 16 ] 13 102 G C - - MP 69 68 6 73 6 2 19 102 134 -9.044 -8.984 -0.022 -7.760 -8.040 -8.435 -4.436 -2.950 -4.512 0.399 -4.802 -4.571 -0.241 -4.729 -4.121 3.555 -4.481 -0.639 -0.635 -4.266 -2.263 -3.394 ML 70 68 6 73 6 1 13 101 132 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 71 68 6 73 6 1 12 100 132 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 72 68 6 73 6 0 8 97 129 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 73 73 5 73 6 1 15 102 134 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 74 74 6 74 5 1 15 101 133 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 17 ] 14 101 A U - - MP 75 74 6 79 6 2 18 100 132 -9.044 -8.984 -0.022 -7.760 -8.040 -8.435 -3.541 -2.640 -3.576 3.140 -3.792 -4.835 0.492 -3.633 -3.480 1.350 -4.015 -0.160 0.073 -4.063 -1.450 -2.427 ML 76 74 6 79 6 1 12 99 130 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 77 74 6 79 6 1 11 98 130 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 78 74 6 79 6 0 7 96 127 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 79 79 5 79 6 1 14 100 132 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 80 80 6 80 5 1 14 99 131 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 18 ] 15 100 G C - - MP 81 80 6 85 6 2 16 98 130 -9.044 -8.984 -0.022 -7.760 -8.040 -8.435 -4.001 -2.704 -4.052 0.740 -4.552 -4.452 -0.023 -4.365 -3.873 3.376 -4.268 0.257 -0.330 -3.953 -2.014 -2.953 ML 82 80 6 85 6 1 11 97 129 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 83 80 6 85 6 1 10 96 128 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 84 80 6 85 6 0 7 94 126 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 85 85 5 85 6 1 13 98 130 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 86 86 6 86 5 1 13 97 129 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 19 ] 16 99 c g - - MP 87 86 6 91 6 2 14 96 128 -9.044 -8.984 -0.022 -7.760 -8.040 -8.435 -3.024 -2.993 -3.036 0.465 -2.305 -3.702 2.777 0.191 -3.057 0.670 -3.505 -1.154 1.281 -3.244 -0.083 -2.037 ML 88 86 6 91 6 1 11 95 127 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 89 86 6 91 6 1 9 95 126 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 90 86 6 91 6 0 7 93 124 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 91 91 5 91 6 1 12 96 128 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 92 92 6 92 5 1 12 96 127 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 20 ] 17 98 c g - - MP 93 92 6 97 4 2 12 94 126 -6.777 -6.984 -0.060 -5.398 -3.027 -2.996 -3.038 0.464 -2.307 -3.705 2.783 0.166 -3.060 0.669 -3.507 -1.155 1.281 -3.247 -0.084 -2.039 ML 94 92 6 97 4 1 10 94 126 -3.758 -3.940 -0.507 -2.670 0.368 -0.385 -0.191 0.094 MR 95 92 6 97 4 1 7 93 125 -4.809 -3.838 -1.706 -0.766 0.368 -0.385 -0.191 0.094 D 96 92 6 97 4 0 6 92 124 -4.568 -4.250 -2.265 -0.520 IL 97 97 5 97 4 1 11 95 127 -1.686 -2.369 -1.117 -4.855 0.000 0.000 0.000 0.000 IR 98 98 6 98 3 1 11 94 126 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 21 ] 18 - A - - - ML 99 98 6 101 3 1 11 92 124 -2.573 -0.284 -6.525 1.323 -1.477 -0.686 -0.949 D 100 98 6 101 3 0 6 91 122 -5.620 -0.734 -1.403 IL 101 101 3 101 3 1 10 92 124 -2.496 -0.349 -4.735 0.000 0.000 0.000 0.000 [ MATR 22 ] - 97 - u - - MR 102 101 3 104 5 1 11 91 123 -6.956 -0.043 -6.772 -6.984 -7.875 0.316 -0.437 -0.544 0.413 D 103 101 3 104 5 0 4 89 121 -5.352 -0.707 -2.978 -4.409 -2.404 IR 104 104 3 104 5 1 8 91 123 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 23 ] 20 96 g c - - MP 105 104 3 109 6 2 12 90 122 -9.044 -8.984 -0.022 -7.760 -8.040 -8.435 -3.523 -2.432 -3.586 1.079 -4.083 -4.371 0.319 -3.856 -3.506 2.903 -3.956 1.523 0.026 -3.702 -1.629 -2.474 ML 106 104 3 109 6 1 6 88 120 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 107 104 3 109 6 1 6 88 120 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 108 104 3 109 6 0 2 85 117 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 109 109 5 109 6 1 7 89 121 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 110 110 6 110 5 1 7 89 121 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 24 ] 21 95 G C - - MP 111 110 6 115 6 2 11 88 120 -9.044 -8.984 -0.022 -7.760 -8.040 -8.435 -4.436 -2.950 -4.512 0.399 -4.802 -4.571 -0.241 -4.729 -4.121 3.555 -4.481 -0.639 -0.635 -4.266 -2.263 -3.394 ML 112 110 6 115 6 1 5 86 118 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 113 110 6 115 6 1 5 86 118 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 114 110 6 115 6 0 1 83 115 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 115 115 5 115 6 1 7 87 119 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 116 116 6 116 5 1 7 87 119 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 25 ] 22 94 A U - - MP 117 116 6 121 6 2 9 86 118 -9.044 -8.984 -0.022 -7.760 -8.040 -8.435 -3.541 -2.640 -3.576 3.140 -3.792 -4.835 0.492 -3.633 -3.480 1.350 -4.015 -0.160 0.073 -4.063 -1.450 -2.427 ML 118 116 6 121 6 1 5 84 116 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 119 116 6 121 6 1 4 84 116 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 120 116 6 121 6 0 1 81 113 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 121 121 5 121 6 1 6 85 117 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 122 122 6 122 5 1 6 85 117 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 26 ] 23 93 U A - - MP 123 122 6 127 6 2 7 84 116 -9.044 -8.984 -0.022 -7.760 -8.040 -8.435 -3.873 -3.685 -3.745 -0.005 -2.758 -4.337 1.562 -3.430 -3.753 0.303 -4.142 -1.594 3.151 -4.035 -0.442 -2.607 ML 124 122 6 127 6 1 4 83 115 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 125 122 6 127 6 1 3 82 114 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 126 122 6 127 6 0 1 80 112 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 127 127 5 127 6 1 5 83 115 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 128 128 6 128 5 1 5 83 115 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 27 ] 24 92 G C - - MP 129 128 6 133 4 2 5 82 114 -6.777 -6.984 -0.060 -5.398 -3.130 -2.450 -3.227 0.923 -3.340 -3.883 0.704 -3.506 -0.256 3.002 -3.674 -0.314 0.400 -3.268 -1.136 -2.265 ML 130 128 6 133 4 1 3 81 113 -3.758 -3.940 -0.507 -2.670 0.368 -0.385 -0.191 0.094 MR 131 128 6 133 4 1 2 81 113 -4.809 -3.838 -1.706 -0.766 0.368 -0.385 -0.191 0.094 D 132 128 6 133 4 0 1 80 111 -4.568 -4.250 -2.265 -0.520 IL 133 133 5 133 4 1 4 82 114 -1.686 -2.369 -1.117 -4.855 0.000 0.000 0.000 0.000 IR 134 134 6 134 3 1 4 82 114 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 28 ] 25 - a - - - ML 135 134 6 137 3 1 3 80 112 -7.806 -0.023 -6.460 0.708 -1.258 0.399 -0.667 D 136 134 6 137 3 0 0 78 110 -6.174 -1.687 -0.566 IL 137 137 3 137 3 1 3 81 113 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 29 ] 26 - C - - - ML 138 137 3 140 3 1 2 79 111 -8.207 -0.021 -6.525 -1.365 1.505 -2.173 -0.856 D 139 137 3 140 3 0 0 78 109 -5.620 -0.734 -1.403 IL 140 140 3 140 3 1 2 79 111 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 30 ] - 91 - a - - MR 141 140 3 143 3 1 1 78 110 -8.207 -0.258 -2.642 0.247 0.087 -0.251 -0.136 D 142 140 3 143 3 0 0 76 108 -6.390 -1.568 -0.620 IR 143 143 3 143 3 1 2 79 110 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 31 ] - 90 - G - - MR 144 143 3 146 5 1 3 77 109 -6.741 -0.050 -6.557 -6.769 -7.661 -0.721 -1.781 1.410 -1.168 D 145 143 3 146 5 0 0 76 107 -6.056 -0.677 -2.220 -5.114 -3.108 IR 146 146 3 146 5 1 1 77 109 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 32 ] 27 89 u a - - MP 147 146 3 151 6 2 4 76 108 -9.013 -8.952 -0.023 -7.728 -8.008 -8.403 -3.207 -3.155 -3.167 0.438 -2.321 -3.808 1.943 -2.968 -3.194 0.719 -3.624 -1.228 2.317 -3.389 1.320 -2.120 ML 148 146 3 151 6 1 1 75 106 -6.605 -6.951 -0.907 -1.360 -6.801 -4.330 -0.011 -0.413 -0.613 0.680 MR 149 146 3 151 6 1 1 74 106 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 150 146 3 151 6 0 0 71 103 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 151 151 5 151 6 1 1 76 107 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 152 152 6 152 5 1 1 75 107 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 33 ] 28 88 u g - - MP 153 152 6 157 6 2 4 74 106 -9.044 -8.984 -0.022 -7.760 -8.040 -8.435 -3.775 -3.682 -3.549 -0.049 -2.410 -4.027 1.867 -3.151 -3.587 0.201 -3.912 -1.693 1.065 -3.889 2.774 -2.474 ML 154 152 6 157 6 1 1 72 104 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 155 152 6 157 6 1 1 72 104 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 156 152 6 157 6 0 0 69 101 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 157 157 5 157 6 1 1 74 105 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 158 158 6 158 5 1 1 73 105 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 34 ] 29 87 G C - - MP 159 158 6 163 6 2 4 72 104 -9.044 -8.984 -0.022 -7.760 -8.040 -8.435 -3.662 -2.519 -3.709 0.980 -4.210 -4.367 0.235 -4.012 -3.631 3.105 -4.060 1.078 -0.060 -3.745 -1.726 -2.612 ML 160 158 6 163 6 1 1 70 102 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 161 158 6 163 6 1 1 70 102 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 162 158 6 163 6 0 0 67 99 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 163 163 5 163 6 1 1 72 103 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 164 164 6 164 5 1 1 71 103 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 35 ] 30 86 C G - - MP 165 164 6 169 6 2 4 70 102 -9.044 -8.984 -0.022 -7.760 -8.040 -8.435 -4.235 -4.110 -3.976 -0.374 -2.767 -4.428 3.440 -3.545 -4.016 -0.083 -4.309 -2.054 0.776 -4.323 -0.468 -2.868 ML 166 164 6 169 6 1 1 68 100 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 167 164 6 169 6 1 1 68 100 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 168 164 6 169 6 0 0 65 97 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 169 169 5 169 6 1 1 70 101 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 170 170 6 170 5 1 1 69 101 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 36 ] 31 85 C G - - MP 171 170 6 175 6 2 3 68 100 -9.044 -8.984 -0.022 -7.760 -8.040 -8.435 -3.444 -3.479 -3.391 0.072 0.220 -4.004 3.083 -3.184 -3.427 0.234 -3.838 -1.640 1.068 -3.635 -0.265 -2.374 ML 172 170 6 175 6 1 1 66 98 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 173 170 6 175 6 1 1 66 98 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 174 170 6 175 6 0 0 63 95 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 175 175 5 175 6 1 1 68 99 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 176 176 6 176 5 1 1 67 99 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 37 ] 32 84 g c - - MP 177 176 6 181 6 2 3 66 98 -9.044 -8.984 -0.022 -7.760 -8.040 -8.435 -3.547 -2.448 -3.605 1.062 -4.102 -4.367 0.307 -3.883 -3.529 2.946 -3.975 1.439 0.014 -3.706 -1.643 -2.497 ML 178 176 6 181 6 1 1 64 96 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 179 176 6 181 6 1 1 64 96 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 180 176 6 181 6 0 0 61 93 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 181 181 5 181 6 1 1 66 97 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 182 182 6 182 5 1 1 65 97 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 38 ] 33 83 G C - - MP 183 182 6 187 6 2 3 64 96 -9.044 -8.984 -0.022 -7.760 -8.040 -8.435 -3.644 -2.520 -3.674 1.267 -4.150 -4.317 0.313 -3.997 -3.637 3.145 -4.059 0.369 0.017 -3.686 -1.656 -2.589 ML 184 182 6 187 6 1 1 63 94 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 185 182 6 187 6 1 1 62 94 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 186 182 6 187 6 0 0 60 91 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 187 187 5 187 6 1 1 64 95 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 188 188 6 188 5 1 1 63 95 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 39 ] 34 82 C G - - MP 189 188 6 193 6 2 3 62 94 -9.044 -8.984 -0.051 -5.361 -8.040 -8.435 -4.235 -4.110 -3.976 -0.374 -2.767 -4.428 3.440 -3.545 -4.016 -0.083 -4.309 -2.054 0.776 -4.323 -0.468 -2.868 ML 190 188 6 193 6 1 1 61 93 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 191 188 6 193 6 1 1 60 92 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 192 188 6 193 6 0 0 58 90 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 193 193 5 193 6 1 1 62 93 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 194 194 6 194 5 1 1 61 93 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 40 ] 35 81 a u - - MP 195 194 6 199 4 2 2 60 92 -6.694 -3.857 -0.158 -5.315 -3.112 -2.258 -3.211 2.517 -3.585 -4.359 0.624 -3.398 -3.131 1.817 -3.664 1.238 0.339 -3.541 -1.274 -2.097 ML 196 194 6 199 4 1 1 60 92 -4.005 -2.235 -0.754 -2.917 0.845 -0.724 -0.451 -0.205 MR 197 194 6 199 4 1 1 59 91 -4.809 -3.838 -1.706 -0.766 0.368 -0.385 -0.191 0.094 D 198 194 6 199 4 0 0 57 89 -4.568 -4.250 -2.265 -0.520 IL 199 199 5 199 4 1 1 60 92 -1.686 -2.369 -1.117 -4.855 0.000 0.000 0.000 0.000 IR 200 200 6 200 3 1 1 60 92 -1.473 -0.744 -4.549 0.000 0.000 0.000 0.000 [ MATL 41 ] 36 - U - - - ML 201 200 6 203 3 1 1 58 90 -7.806 -0.113 -3.815 -1.199 -1.247 -1.916 1.525 D 202 200 6 203 3 0 0 56 88 -6.174 -1.687 -0.566 IL 203 203 3 203 3 1 1 59 91 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 42 ] 37 - a - - - ML 204 203 3 206 3 1 1 57 89 -7.717 -0.024 -6.371 0.665 -0.878 -0.107 -0.087 D 205 203 3 206 3 0 0 55 87 -6.754 -2.267 -0.353 IL 206 206 3 206 3 1 1 58 90 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 43 ] 38 - U - - - ML 207 206 3 209 3 1 1 56 88 -7.717 -0.024 -6.371 -0.672 -0.427 -1.394 1.168 D 208 206 3 209 3 0 0 54 86 -6.754 -0.892 -1.146 IL 209 209 3 209 3 1 1 57 89 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 44 ] 39 - g - - - ML 210 209 3 212 3 1 1 55 87 -7.806 -0.112 -3.833 0.135 -1.464 0.992 -0.862 D 211 209 3 212 3 0 0 53 85 -6.174 -1.687 -0.566 IL 212 212 3 212 3 1 1 56 88 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 45 ] 40 - u - - - ML 213 212 3 215 3 1 1 54 86 -7.719 -0.024 -6.373 -0.074 0.356 -1.044 0.362 D 214 212 3 215 3 0 0 52 84 -6.747 -2.260 -0.355 IL 215 215 3 215 3 1 1 55 87 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 46 ] 41 - U - - - ML 216 215 3 218 3 1 1 53 85 -7.719 -0.024 -6.373 -0.227 -0.773 -1.185 1.084 D 217 215 3 218 3 0 0 51 83 -6.747 -0.898 -1.138 IL 218 218 3 218 3 1 1 54 86 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 47 ] 42 - u - - - ML 219 218 3 221 3 1 1 52 84 -7.806 -0.204 -2.975 -0.384 -0.792 -0.375 0.915 D 220 218 3 221 3 0 0 50 82 -6.174 -1.687 -0.566 IL 221 221 3 221 3 1 1 53 85 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 48 ] 43 - a - - - ML 222 221 3 224 3 1 1 51 83 -7.628 -0.026 -6.282 0.765 -0.835 -0.376 -0.045 D 223 221 3 224 3 0 0 48 80 -7.145 -2.658 -0.261 IL 224 224 3 224 3 1 1 52 84 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 49 ] 44 - A - - - ML 225 224 3 227 3 1 1 50 82 -7.628 -0.127 -3.653 1.527 -1.712 -1.409 -1.196 D 226 224 3 227 3 0 0 47 79 -7.145 -2.658 -0.261 IL 227 227 3 227 3 1 1 51 83 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 50 ] 45 - A - - - ML 228 227 3 230 3 1 1 49 81 -7.529 -0.028 -6.183 1.449 -1.527 -1.241 -0.999 D 229 227 3 230 3 0 0 46 78 -7.466 -2.979 -0.205 IL 230 230 3 230 3 1 1 50 82 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 51 ] 46 - A - - - ML 231 230 3 233 3 1 1 48 80 -7.529 -0.028 -6.183 1.449 -1.527 -1.241 -0.999 D 232 230 3 233 3 0 0 45 77 -7.466 -2.979 -0.205 IL 233 233 3 233 3 1 1 49 81 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 52 ] 47 - g - - - ML 234 233 3 236 3 1 1 47 79 -7.529 -0.028 -6.183 0.168 -0.813 0.369 0.023 D 235 233 3 236 3 0 0 44 76 -7.466 -2.979 -0.205 IL 236 236 3 236 3 1 1 48 80 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 53 ] 48 - c - - - ML 237 236 3 239 3 1 1 46 78 -7.529 -0.028 -6.183 -0.123 0.214 -0.047 -0.069 D 238 236 3 239 3 0 0 43 75 -7.466 -2.979 -0.205 IL 239 239 3 239 3 1 1 47 79 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 54 ] 49 - u - - - ML 240 239 3 242 3 1 1 45 77 -7.529 -0.028 -6.183 0.292 -0.261 -0.822 0.460 D 241 239 3 242 3 0 0 42 73 -7.466 -2.979 -0.205 IL 242 242 3 242 3 1 1 46 78 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 55 ] 50 - a - - - ML 243 242 3 245 3 1 1 44 76 -1.890 -0.481 -6.183 0.965 -0.883 -0.881 -0.054 D 244 242 3 245 3 0 0 40 72 -7.466 -2.979 -0.205 IL 245 245 3 245 3 1 1 45 77 -1.015 -1.062 -5.246 0.000 0.000 0.000 0.000 [ MATL 56 ] 55 - a - - - ML 246 245 3 248 3 1 1 42 73 -7.529 -0.028 -6.183 0.489 -1.075 0.487 -0.473 D 247 245 3 248 3 0 0 39 71 -7.466 -2.979 -0.205 IL 248 248 3 248 3 1 1 42 74 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 57 ] 56 - A - - - ML 249 248 3 251 3 1 1 41 72 -7.529 -0.028 -6.183 1.449 -1.527 -1.241 -0.999 D 250 248 3 251 3 0 0 38 70 -7.466 -1.615 -0.582 IL 251 251 3 251 3 1 1 41 73 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 58 ] 57 - U - - - ML 252 251 3 254 3 1 1 40 71 -7.628 -0.026 -6.282 -0.896 -1.003 -1.591 1.396 D 253 251 3 254 3 0 0 37 69 -7.145 -2.658 -0.261 IL 254 254 3 254 3 1 1 40 72 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 59 ] 58 - C - - - ML 255 254 3 257 3 1 1 39 70 -7.628 -0.026 -6.282 -0.972 1.327 -1.755 -0.547 D 256 254 3 257 3 0 0 36 68 -7.145 -2.658 -0.261 IL 257 257 3 257 3 1 1 39 71 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 60 ] 59 - c - - - ML 258 257 3 260 3 1 1 38 69 -7.628 -0.026 -6.282 -0.603 0.914 -1.374 0.100 D 259 257 3 260 3 0 0 35 67 -7.145 -2.658 -0.261 IL 260 260 3 260 3 1 1 38 70 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 61 ] 60 - C - - - ML 261 260 3 263 3 1 1 37 68 -7.628 -0.026 -6.282 -0.972 1.327 -1.755 -0.547 D 262 260 3 263 3 0 0 34 66 -7.145 -2.658 -0.261 IL 263 263 3 263 3 1 1 37 69 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 62 ] 61 - u - - - ML 264 263 3 266 3 1 1 36 67 -7.628 -0.026 -6.282 -0.450 0.290 -1.191 0.685 D 265 263 3 266 3 0 0 33 65 -7.145 -2.658 -0.261 IL 266 266 3 266 3 1 1 36 68 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 63 ] 62 - U - - - ML 267 266 3 269 3 1 1 35 66 -7.628 -0.026 -6.282 -0.896 -1.003 -1.591 1.396 D 268 266 3 269 3 0 0 32 64 -7.145 -2.658 -0.261 IL 269 269 3 269 3 1 1 35 67 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 64 ] 63 - u - - - ML 270 269 3 272 3 1 1 34 65 -7.628 -0.026 -6.282 0.095 -0.126 -0.179 0.179 D 271 269 3 272 3 0 0 31 63 -7.145 -2.658 -0.261 IL 272 272 3 272 3 1 1 34 66 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 65 ] 64 - U - - - ML 273 272 3 275 3 1 1 33 64 -7.628 -0.026 -6.282 -0.572 -0.362 -1.288 1.097 D 274 272 3 275 3 0 0 31 63 -7.145 -0.626 -1.536 IL 275 275 3 275 3 1 1 33 65 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 66 ] 65 - a - - - ML 276 275 3 278 3 1 1 32 63 -7.806 -0.023 -6.460 0.237 -0.288 -0.046 0.048 D 277 275 3 278 3 0 0 29 61 -6.174 -1.687 -0.566 IL 278 278 3 278 3 1 1 32 64 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 67 ] 66 - a - - - ML 279 278 3 281 3 1 1 31 62 -4.018 -0.109 -6.460 0.523 -0.470 -0.518 0.192 D 280 278 3 281 3 0 0 27 59 -6.174 -1.687 -0.566 IL 281 281 3 281 3 1 1 34 66 -0.831 -1.304 -4.920 0.000 0.000 0.000 0.000 [ MATL 68 ] 73 - g - - - ML 282 281 3 284 3 1 1 19 38 -7.806 -0.023 -6.460 0.137 -1.464 0.991 -0.861 D 283 281 3 284 3 0 0 18 37 -6.174 -1.687 -0.566 IL 284 284 3 284 3 1 1 22 41 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 69 ] 74 - G - - - ML 285 284 3 287 3 1 1 18 36 -7.806 -0.023 -6.460 -0.318 -1.742 1.290 -1.138 D 286 284 3 287 3 0 0 17 36 -6.174 -1.687 -0.566 IL 287 287 3 287 3 1 1 21 40 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 70 ] 75 - g - - - ML 288 287 3 290 3 1 1 16 35 -7.806 -0.023 -6.460 -0.321 -0.494 0.819 -0.464 D 289 287 3 290 3 0 0 16 34 -6.174 -1.687 -0.566 IL 290 290 3 290 3 1 1 20 38 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 71 ] 76 - U - - - ML 291 290 3 293 3 1 1 15 33 -7.806 -0.109 -3.871 -1.199 -1.247 -1.916 1.525 D 292 290 3 293 3 0 0 15 33 -6.174 -1.687 -0.566 IL 293 293 3 293 3 1 1 19 37 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 72 ] 77 - g - - - ML 294 293 3 296 3 1 1 13 32 -7.721 -0.024 -6.375 0.225 -1.342 0.877 -0.737 D 295 293 3 296 3 0 0 13 31 -6.732 -2.245 -0.359 IL 296 296 3 296 3 1 1 18 36 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 73 ] 78 - U - - - ML 297 296 3 299 2 1 1 1 1 * 0.000 -1.052 -1.128 -1.759 1.467 D 298 296 3 299 2 0 0 0 0 * 0.000 IL 299 299 3 299 2 1 1 13 28 -1.823 -0.479 0.000 0.000 0.000 0.000 [ END 74 ] - - - - - - E 300 299 3 -1 0 0 0 0 0 // HMMER3/f [3.3.2 | Nov 2020] NAME MIR169_6 ACC RF04244 DESC MIR169_6 microRNA precursor family LENG 99 MAXL 198 ALPH RNA RF no MM no CONS yes CS yes MAP yes DATE Mon Jun 12 13:59:20 2023 COM [1] /hps/software/users/agb/rfam/bin/cmbuild -F CM SEED COM [2] /hps/software/users/agb/rfam/bin/cmcalibrate --cpu 8 /homes/nancyontiveros/NEW/MIPF0001058__MIR169_6/CM NSEQ 8 EFFN 2.417969 CKSUM 2957209510 STATS LOCAL MSV -9.0607 0.71872 STATS LOCAL VITERBI -10.3108 0.71872 STATS LOCAL FORWARD -3.2683 0.71872 HMM A C G U m->m m->i m->d i->m i->i d->m d->d COMPO 1.50199 1.45592 1.32754 1.27654 1.38629 1.38629 1.38629 1.38629 0.29209 3.88687 1.45764 1.46634 0.26236 0.00000 * 1 0.25787 2.78003 2.55005 2.43968 1 A - - : 1.38629 1.38629 1.38629 1.38629 0.05348 3.64826 3.64826 1.46634 0.26236 1.09105 0.40927 2 2.40622 3.23989 0.20981 2.81440 2 G - - : 1.38629 1.38629 1.38629 1.38629 0.04892 3.73508 3.73508 1.46634 0.26236 2.28913 0.10687 3 0.47824 2.44544 1.60158 2.38749 3 A - - < 1.38629 1.38629 1.38629 1.38629 0.04892 3.73508 3.73508 1.46634 0.26236 0.78698 0.60737 4 2.08249 2.73726 0.30527 2.60759 4 G - - < 1.38629 1.38629 1.38629 1.38629 0.04507 3.81513 3.81513 1.46634 0.26236 1.85238 0.17063 5 2.82652 1.52262 2.60852 0.43233 5 U - - < 1.38629 1.38629 1.38629 1.38629 0.04507 3.81513 3.81513 1.46634 0.26236 1.85238 0.17063 6 0.93269 2.54540 0.83099 2.38112 6 g - - < 1.38629 1.38629 1.38629 1.38629 0.04507 3.81513 3.81513 1.46634 0.26236 1.85238 0.17063 7 1.75648 1.23904 1.34252 1.28555 7 c - - < 1.38629 1.38629 1.38629 1.38629 0.12878 2.31465 3.81513 0.39860 1.11249 0.37648 1.15923 8 1.08566 1.69524 1.49340 1.36980 9 a - - < 1.38629 1.38629 1.38629 1.38629 0.04188 3.88687 3.88687 1.46634 0.26236 1.09861 0.40547 9 2.64453 2.60263 3.16333 0.20752 10 U - - - 1.38629 1.38629 1.38629 1.38629 0.04188 3.88687 3.88687 1.46634 0.26236 1.09861 0.40547 10 2.64453 2.60263 3.16333 0.20752 11 U - - - 1.38629 1.38629 1.38629 1.38629 0.04188 3.88687 3.88687 1.46634 0.26236 1.09861 0.40547 11 3.00796 1.93352 2.76436 0.29712 12 U - - < 1.38629 1.38629 1.38629 1.38629 0.04188 3.88687 3.88687 1.46634 0.26236 1.09861 0.40547 12 2.60865 3.27712 0.16427 3.21604 13 G - - < 1.38629 1.38629 1.38629 1.38629 0.04188 3.88687 3.88687 1.46634 0.26236 1.09861 0.40547 13 0.32707 2.81708 1.86393 2.74695 14 A - - < 1.38629 1.38629 1.38629 1.38629 0.04188 3.88687 3.88687 1.46634 0.26236 1.09861 0.40547 14 2.28716 3.00434 0.23220 2.88083 15 G - - < 1.38629 1.38629 1.38629 1.38629 0.04188 3.88687 3.88687 1.46634 0.26236 1.09861 0.40547 15 2.48923 0.47996 2.28124 1.62932 16 C - - < 1.38629 1.38629 1.38629 1.38629 0.04188 3.88687 3.88687 1.46634 0.26236 1.09861 0.40547 16 2.48835 0.48035 2.28038 1.62893 17 C - - < 1.38629 1.38629 1.38629 1.38629 0.04188 3.88687 3.88687 1.46634 0.26236 1.09861 0.40547 17 0.37301 2.66372 1.93832 2.32581 18 A - - - 1.38629 1.38629 1.38629 1.38629 0.29654 1.44348 3.88687 0.16550 1.88038 1.09861 0.40547 18 1.99461 2.72500 0.32490 2.57981 20 G - - < 1.38629 1.38629 1.38629 1.38629 0.04188 3.88687 3.88687 1.46634 0.26236 1.09861 0.40547 19 2.60730 3.27549 0.16456 3.21378 21 G - - < 1.38629 1.38629 1.38629 1.38629 0.04188 3.88687 3.88687 1.46634 0.26236 1.09861 0.40547 20 0.32721 2.81653 1.86382 2.74616 22 A - - < 1.38629 1.38629 1.38629 1.38629 0.04188 3.88687 3.88687 1.46634 0.26236 1.09861 0.40547 21 3.00986 1.93364 2.76521 0.29690 23 U - - < 1.38629 1.38629 1.38629 1.38629 0.04188 3.88687 3.88687 1.46634 0.26236 1.09861 0.40547 22 2.13630 2.52427 0.33929 2.41331 24 G - - < 1.38629 1.38629 1.38629 1.38629 0.04188 3.88687 3.88687 1.46634 0.26236 1.09861 0.40547 23 0.84224 2.46079 1.03196 2.05901 25 a - - - 1.38629 1.38629 1.38629 1.38629 0.04188 3.88687 3.88687 1.46634 0.26236 1.09861 0.40547 24 2.89104 0.19260 3.46731 2.42507 26 C - - - 1.38629 1.38629 1.38629 1.38629 0.04188 3.88687 3.88687 1.46634 0.26236 1.09861 0.40547 25 2.36286 1.45027 2.18100 0.58265 27 U - - < 1.38629 1.38629 1.38629 1.38629 0.04188 3.88687 3.88687 1.46634 0.26236 1.09861 0.40547 26 2.89064 1.59541 2.72936 0.39101 28 U - - < 1.38629 1.38629 1.38629 1.38629 0.04188 3.88687 3.88687 1.46634 0.26236 1.09861 0.40547 27 2.06146 2.76298 0.30547 2.61929 29 G - - < 1.38629 1.38629 1.38629 1.38629 0.04188 3.88687 3.88687 1.46634 0.26236 1.09861 0.40547 28 3.19695 0.23533 2.99502 2.13057 30 C - - < 1.38629 1.38629 1.38629 1.38629 0.04188 3.88687 3.88687 1.46634 0.26236 1.09861 0.40547 29 2.71764 0.38152 2.53716 1.75995 31 C - - < 1.38629 1.38629 1.38629 1.38629 0.04188 3.88687 3.88687 1.46634 0.26236 1.09861 0.40547 30 2.00598 2.72833 0.32207 2.58369 32 G - - < 1.38629 1.38629 1.38629 1.38629 0.04188 3.88687 3.88687 1.46634 0.26236 1.09861 0.40547 31 1.78306 2.66250 0.38245 2.52676 33 G - - < 1.38629 1.38629 1.38629 1.38629 0.04188 3.88687 3.88687 1.46634 0.26236 1.09861 0.40547 32 3.22203 0.23261 3.00724 2.13506 34 C - - < 1.38629 1.38629 1.38629 1.38629 0.04188 3.88687 3.88687 1.46634 0.26236 1.09861 0.40547 33 0.77383 2.52906 1.01004 2.35578 35 a - - < 1.38629 1.38629 1.38629 1.38629 0.04188 3.88687 3.88687 1.46634 0.26236 1.09861 0.40547 34 2.64453 2.60263 3.16333 0.20752 36 U - - _ 1.38629 1.38629 1.38629 1.38629 0.12054 3.88687 2.37464 1.46634 0.26236 1.09861 0.40547 35 0.88612 2.08613 1.43767 1.48678 37 a - - _ 1.38629 1.38629 1.38629 1.38629 0.04524 3.81156 3.81156 1.46634 0.26236 1.87745 0.16603 36 2.07542 1.75377 2.58937 0.46791 38 U - - _ 1.38629 1.38629 1.38629 1.38629 0.04524 3.81156 3.81156 1.46634 0.26236 0.36523 1.18430 37 1.33771 2.64909 0.57807 2.24564 39 G - - _ 1.38629 1.38629 1.38629 1.38629 0.11931 3.88687 2.38639 1.46634 0.26236 1.09861 0.40547 38 1.49498 1.04741 2.23995 1.14433 40 c - - _ 1.38629 1.38629 1.38629 1.38629 0.04518 3.81273 3.81273 1.46634 0.26236 1.86931 0.16751 39 1.65459 2.08087 2.40813 0.52084 41 U - - _ 1.38629 1.38629 1.38629 1.38629 0.04518 3.81273 3.81273 1.46634 0.26236 0.36883 1.17617 40 1.80278 2.07972 1.66449 0.65219 42 U - - _ 1.38629 1.38629 1.38629 1.38629 0.20052 3.88687 1.82519 1.46634 0.26236 1.09861 0.40547 41 0.80539 2.04778 1.66202 1.45111 43 a - - _ 1.38629 1.38629 1.38629 1.38629 0.04891 3.73526 3.73526 1.46634 0.26236 2.28839 0.10695 42 0.21074 2.95923 2.71124 2.63523 44 A - - _ 1.38629 1.38629 1.38629 1.38629 0.14048 3.73526 2.23311 1.46634 0.26236 2.28839 0.10695 43 0.25787 2.78001 2.55003 2.43967 45 A - - _ 1.38629 1.38629 1.38629 1.38629 0.05348 3.64825 3.64825 1.46634 0.26236 2.59155 0.07786 44 0.25787 2.78001 2.55003 2.43967 46 A - - _ 1.38629 1.38629 1.38629 1.38629 0.05348 3.64825 3.64825 1.46634 0.26236 2.59155 0.07786 45 1.29894 2.03156 1.05151 1.39983 47 g - - _ 1.38629 1.38629 1.38629 1.38629 0.05348 3.64825 3.64825 1.46634 0.26236 2.59155 0.07786 46 1.56697 1.14815 1.36321 1.52206 48 c - - _ 1.38629 1.38629 1.38629 1.38629 0.05348 3.64825 3.64825 1.46634 0.26236 2.59155 0.07786 47 1.17638 1.56220 2.03352 1.04680 49 u - - _ 1.38629 1.38629 1.38629 1.38629 0.05348 3.64825 3.64825 1.46634 0.26236 2.59155 0.07786 48 0.64152 2.09978 2.11623 1.46733 50 A - - _ 1.38629 1.38629 1.38629 1.38629 0.49194 1.01467 3.64825 0.95981 0.48283 2.59155 0.07786 49 1.02728 2.27362 0.95909 1.85893 55 g - - _ 1.38629 1.38629 1.38629 1.38629 0.05348 3.64825 3.64825 1.46634 0.26236 2.59155 0.07786 50 0.25787 2.78001 2.55003 2.43967 56 A - - _ 1.38629 1.38629 1.38629 1.38629 0.05348 3.64825 3.64825 1.46634 0.26236 1.08940 0.41010 51 2.35143 2.36037 2.85652 0.28380 57 U - - _ 1.38629 1.38629 1.38629 1.38629 0.04891 3.73526 3.73526 1.46634 0.26236 2.28839 0.10695 52 2.50813 0.28460 3.07621 2.11917 58 C - - _ 1.38629 1.38629 1.38629 1.38629 0.04891 3.73526 3.73526 1.46634 0.26236 2.28839 0.10695 53 2.03000 0.60401 2.59131 1.39785 59 C - - _ 1.38629 1.38629 1.38629 1.38629 0.04891 3.73526 3.73526 1.46634 0.26236 2.28839 0.10695 54 2.50813 0.28460 3.07621 2.11917 60 C - - _ 1.38629 1.38629 1.38629 1.38629 0.04891 3.73526 3.73526 1.46634 0.26236 2.28839 0.10695 55 1.84679 1.11029 2.38086 0.86673 61 u - - _ 1.38629 1.38629 1.38629 1.38629 0.04891 3.73526 3.73526 1.46634 0.26236 2.28839 0.10695 56 2.35143 2.36037 2.85652 0.28380 62 U - - _ 1.38629 1.38629 1.38629 1.38629 0.04891 3.73526 3.73526 1.46634 0.26236 2.28839 0.10695 57 1.35033 1.44512 1.47117 1.28927 63 u - - _ 1.38629 1.38629 1.38629 1.38629 0.04891 3.73526 3.73526 1.46634 0.26236 2.28839 0.10695 58 1.97683 1.69293 2.48739 0.52023 64 U - - _ 1.38629 1.38629 1.38629 1.38629 0.04891 3.73526 3.73526 1.46634 0.26236 0.22672 1.59525 59 1.23426 1.57384 1.37131 1.39462 65 a - - _ 1.38629 1.38629 1.38629 1.38629 0.04188 3.88687 3.88687 1.46634 0.26236 1.09861 0.40547 60 0.99010 1.73534 1.76986 1.26669 66 a - - _ 1.38629 1.38629 1.38629 1.38629 0.11716 2.40744 3.88687 1.74910 0.19108 1.09861 0.40547 61 1.33623 2.64827 0.57903 2.24480 73 G - - _ 1.38629 1.38629 1.38629 1.38629 0.04188 3.88687 3.88687 1.46634 0.26236 1.09861 0.40547 62 1.76292 2.91732 0.36582 2.51640 74 G - - _ 1.38629 1.38629 1.38629 1.38629 0.04188 3.88687 3.88687 1.46634 0.26236 1.09861 0.40547 63 1.79388 1.76113 0.66304 1.92036 75 G - - _ 1.38629 1.38629 1.38629 1.38629 0.04188 3.88687 3.88687 1.46634 0.26236 1.09861 0.40547 64 2.64453 2.60263 3.16333 0.20752 76 U - - _ 1.38629 1.38629 1.38629 1.38629 0.11680 3.88687 2.41096 1.46634 0.26236 1.09861 0.40547 65 1.25821 2.53248 0.66019 2.12341 77 G - - _ 1.38629 1.38629 1.38629 1.38629 0.04507 3.81513 3.81513 1.46634 0.26236 1.85238 0.17063 66 2.50438 2.48647 3.01721 0.24063 78 U - - _ 1.38629 1.38629 1.38629 1.38629 0.11974 2.39892 3.81513 0.86550 0.54618 0.37648 1.15923 67 2.59635 1.63598 2.34510 0.45436 81 U - - > 1.38629 1.38629 1.38629 1.38629 0.04188 3.88687 3.88687 1.46634 0.26236 1.09861 0.40547 68 2.41055 3.17419 0.20103 2.98539 82 G - - > 1.38629 1.38629 1.38629 1.38629 0.04188 3.88687 3.88687 1.46634 0.26236 1.09861 0.40547 69 2.76080 0.49902 2.47673 1.40398 83 C - - > 1.38629 1.38629 1.38629 1.38629 0.04188 3.88687 3.88687 1.46634 0.26236 1.09861 0.40547 70 2.81089 0.64525 2.54018 1.08926 84 C - - > 1.38629 1.38629 1.38629 1.38629 0.04188 3.88687 3.88687 1.46634 0.26236 1.09861 0.40547 71 1.47855 2.70271 0.47299 2.50261 85 G - - > 1.38629 1.38629 1.38629 1.38629 0.04188 3.88687 3.88687 1.46634 0.26236 1.09861 0.40547 72 2.40935 3.17254 0.20137 2.98342 86 G - - > 1.38629 1.38629 1.38629 1.38629 0.04188 3.88687 3.88687 1.46634 0.26236 1.09861 0.40547 73 2.86289 0.52064 2.59030 1.29552 87 C - - > 1.38629 1.38629 1.38629 1.38629 0.04188 3.88687 3.88687 1.46634 0.26236 1.09861 0.40547 74 2.13670 2.94072 0.27121 2.70803 88 G - - > 1.38629 1.38629 1.38629 1.38629 0.11680 3.88687 2.41096 1.46634 0.26236 1.09861 0.40547 75 0.98292 2.35236 0.86876 2.19673 89 g - - > 1.38629 1.38629 1.38629 1.38629 0.19816 3.81513 1.84688 1.46634 0.26236 1.85238 0.17063 76 2.26067 3.06955 0.25084 2.64325 90 G - - - 1.38629 1.38629 1.38629 1.38629 0.05233 3.66931 3.66931 1.46634 0.26236 0.17385 1.83523 77 1.22360 1.26496 1.53722 1.56732 91 a - - - 1.38629 1.38629 1.38629 1.38629 0.04188 3.88687 3.88687 1.46634 0.26236 1.09861 0.40547 78 1.97250 0.49435 2.34048 1.86664 92 C - - > 1.38629 1.38629 1.38629 1.38629 0.04188 3.88687 3.88687 1.46634 0.26236 1.09861 0.40547 79 0.33662 2.95098 1.77063 2.75983 93 A - - > 1.38629 1.38629 1.38629 1.38629 0.04188 3.88687 3.88687 1.46634 0.26236 1.09861 0.40547 80 2.97600 2.16261 2.62947 0.27199 94 U - - > 1.38629 1.38629 1.38629 1.38629 0.04188 3.88687 3.88687 1.46634 0.26236 1.09861 0.40547 81 3.42660 0.19380 3.11680 2.30880 95 C - - > 1.38629 1.38629 1.38629 1.38629 0.04188 3.88687 3.88687 1.46634 0.26236 1.09861 0.40547 82 2.81888 0.67771 2.54021 1.03930 96 C - - > 1.38629 1.38629 1.38629 1.38629 0.04188 3.88687 3.88687 1.46634 0.26236 1.09861 0.40547 83 1.15272 1.71476 1.78271 1.09054 97 u - - - 1.38629 1.38629 1.38629 1.38629 0.04188 3.88687 3.88687 1.46634 0.26236 1.09861 0.40547 84 1.88891 2.44999 0.57569 1.60869 98 G - - > 1.38629 1.38629 1.38629 1.38629 0.04188 3.88687 3.88687 1.46634 0.26236 1.09861 0.40547 85 1.88963 2.45097 0.57870 1.59931 99 G - - > 1.38629 1.38629 1.38629 1.38629 0.04188 3.88687 3.88687 1.46634 0.26236 1.09861 0.40547 86 3.10390 0.32269 2.82629 1.76202 100 C - - > 1.38629 1.38629 1.38629 1.38629 0.04188 3.88687 3.88687 1.46634 0.26236 1.09861 0.40547 87 2.97688 2.16272 2.62981 0.27188 101 U - - > 1.38629 1.38629 1.38629 1.38629 0.04188 3.88687 3.88687 1.46634 0.26236 1.09861 0.40547 88 3.42840 0.19364 3.11760 2.30914 102 C - - > 1.38629 1.38629 1.38629 1.38629 0.04188 3.88687 3.88687 1.46634 0.26236 1.09861 0.40547 89 0.33566 2.95561 1.77113 2.76543 103 A - - > 1.38629 1.38629 1.38629 1.38629 0.04188 3.88687 3.88687 1.46634 0.26236 1.09861 0.40547 90 2.04990 1.47989 2.57696 0.56637 104 U - - - 1.38629 1.38629 1.38629 1.38629 0.04188 3.88687 3.88687 1.46634 0.26236 1.09861 0.40547 91 0.82459 2.07241 2.17985 1.13121 105 a - - - 1.38629 1.38629 1.38629 1.38629 0.04188 3.88687 3.88687 1.46634 0.26236 1.09861 0.40547 92 1.82790 1.65200 1.39747 0.91539 106 u - - > 1.38629 1.38629 1.38629 1.38629 0.04188 3.88687 3.88687 1.46634 0.26236 1.09861 0.40547 93 1.49082 1.74594 1.16633 1.24194 107 g - - > 1.38629 1.38629 1.38629 1.38629 0.04188 3.88687 3.88687 1.46634 0.26236 1.09861 0.40547 94 2.54863 1.62202 2.33962 0.46530 108 U - - > 1.38629 1.38629 1.38629 1.38629 0.04188 3.88687 3.88687 1.46634 0.26236 1.09861 0.40547 95 2.01297 2.74394 0.32647 2.51797 109 G - - > 1.38629 1.38629 1.38629 1.38629 0.04188 3.88687 3.88687 1.46634 0.26236 1.09861 0.40547 96 2.67638 0.48578 2.51445 1.44790 110 C - - > 1.38629 1.38629 1.38629 1.38629 0.04188 3.88687 3.88687 1.46634 0.26236 1.09861 0.40547 97 2.46630 1.86519 2.25921 0.42190 111 U - - > 1.38629 1.38629 1.38629 1.38629 0.04188 3.88687 3.88687 1.46634 0.26236 1.09861 0.40547 98 1.82018 0.48775 2.69751 1.85392 112 C - - : 1.38629 1.38629 1.38629 1.38629 0.04188 3.88687 3.88687 1.46634 0.26236 1.09861 0.40547 99 1.97561 1.04247 2.52567 0.84692 113 u - - : 1.38629 1.38629 1.38629 1.38629 0.02116 3.86614 * 1.46634 0.26236 0.00000 * //