INFERNAL1/a [1.1.5 | Sep 2023] NAME HCV_SL669 ACC RF04221 DESC SL669 non-coding RNA STATES 244 NODES 56 CLEN 80 W 96 ALPH RNA RF no CONS yes MAP yes DATE Tue Jul 9 03:43:45 2024 COM [1] /hps/software/users/agb/rfam/bin/cmbuild -F CM SEED COM [2] /hps/software/users/agb/rfam/bin/cmcalibrate --cpu 8 /homes/nancyontiveros/HCV_07.2023/core_SLV-SL833_rfam_RF04221/RF04221/CM PBEGIN 0.05 PEND 0.05 WBETA 1e-07 QDBBETA1 1e-07 QDBBETA2 1e-15 N2OMEGA 1.52588e-05 N3OMEGA 1.52588e-05 ELSELF -0.08926734 NSEQ 57 EFFN 1.242004 CKSUM 403927863 NULL 0.000 0.000 0.000 0.000 GA 80.00 TC 80.20 NC 34.40 EFP7GF -8.4051 0.71896 ECMLC 0.64711 -5.59327 3.14460 1600000 342639 0.003502 ECMGC 0.45908 -14.48730 -2.81611 1600000 84917 0.004710 ECMLI 0.62856 -3.59938 4.71010 1600000 222596 0.005391 ECMGI 0.50491 -9.16014 0.85368 1600000 62792 0.006370 CM [ ROOT 0 ] - - - - - - S 0 -1 0 1 4 1 1 96 116 -6.635 -6.842 -0.066 -5.256 IL 1 1 2 1 4 1 24 100 120 -1.686 -2.369 -1.117 -4.855 0.000 0.000 0.000 0.000 IR 2 2 3 2 3 1 24 99 119 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 1 ] 1 - a - - - ML 3 2 3 5 3 1 23 96 116 -7.676 -0.025 -6.330 0.628 0.067 -0.921 -0.187 D 4 2 3 5 3 0 19 95 115 -6.174 -1.687 -0.566 IL 5 5 3 5 3 1 23 98 118 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 2 ] 2 - u - - - ML 6 5 3 8 5 1 23 95 115 -6.845 -0.046 -6.660 -6.873 -7.764 -0.042 -0.285 -0.792 0.705 D 7 5 3 8 5 0 18 94 114 -4.959 -0.803 -4.221 -2.596 -2.508 IL 8 8 3 8 5 1 21 96 115 -2.408 -0.496 -4.087 -5.920 -5.193 0.000 0.000 0.000 0.000 [ MATP 3 ] 3 80 G C - - MP 9 8 3 13 4 2 22 94 114 -6.579 -7.825 -0.099 -4.278 -4.038 -2.735 -4.108 0.683 -4.462 -4.431 0.047 -4.360 -3.858 3.420 -4.255 -0.211 -0.291 -3.988 -1.956 -3.001 ML 10 8 3 13 4 1 17 94 113 -2.408 -4.532 -1.293 -1.473 0.368 -0.385 -0.191 0.094 MR 11 8 3 13 4 1 19 93 113 -4.102 -12.528 -0.390 -2.485 0.368 -0.385 -0.191 0.094 D 12 8 3 13 4 0 14 91 111 -12.737 -14.007 -2.036 -0.404 IL 13 13 5 13 4 1 19 94 113 -2.817 -4.319 -0.613 -2.698 0.000 0.000 0.000 0.000 IR 14 14 6 14 3 1 21 94 114 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 4 ] - 79 - A - - MR 15 14 6 17 5 1 21 92 112 -6.845 -0.046 -6.660 -6.873 -7.764 1.560 -1.802 -1.491 -1.293 D 16 14 6 17 5 0 13 91 111 -5.352 -0.707 -2.978 -4.409 -2.404 IR 17 17 3 17 5 1 19 92 112 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 5 ] 4 78 a u - - MP 18 17 3 22 6 2 21 91 111 -8.996 -8.935 -0.023 -7.712 -7.991 -8.386 -3.366 -2.515 -3.409 2.955 -3.539 -4.574 0.738 -3.473 -3.324 1.545 -3.849 -0.070 0.316 -3.830 -1.207 -2.273 ML 19 17 3 22 6 1 15 90 109 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 20 17 3 22 6 1 15 89 109 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 21 17 3 22 6 0 10 87 107 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 22 22 5 22 6 1 17 91 111 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 23 23 6 23 5 1 18 90 110 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 6 ] 5 77 C G - - MP 24 23 6 28 6 2 20 89 109 -8.996 -8.935 -0.023 -7.712 -7.991 -8.386 -3.777 -3.650 -3.588 0.055 -2.478 -4.093 3.172 -3.214 -3.621 0.392 -3.960 -1.619 1.292 -3.882 -0.168 -2.484 ML 25 23 6 28 6 1 14 88 107 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 26 23 6 28 6 1 14 87 107 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 27 23 6 28 6 0 9 85 105 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 28 28 5 28 6 1 16 89 109 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 29 29 6 29 5 1 17 88 108 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 7 ] 6 76 C G - - MP 30 29 6 34 6 2 18 87 107 -8.996 -8.935 -0.023 -7.712 -7.991 -8.386 -3.992 -3.839 -3.771 -0.131 -2.626 -4.253 3.331 -3.377 -3.807 0.211 -4.122 -1.781 0.937 -4.094 -0.324 -2.668 ML 31 29 6 34 6 1 13 86 105 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 32 29 6 34 6 1 13 86 105 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 33 29 6 34 6 0 9 83 103 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 34 34 5 34 6 1 15 87 107 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 35 35 6 35 5 1 16 86 106 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 8 ] 7 75 C G - - MP 36 35 6 40 6 2 16 85 105 -8.996 -8.935 -0.023 -7.712 -7.991 -8.386 -3.992 -3.839 -3.771 -0.131 -2.626 -4.253 3.331 -3.377 -3.807 0.211 -4.122 -1.781 0.937 -4.094 -0.324 -2.668 ML 37 35 6 40 6 1 12 84 104 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 38 35 6 40 6 1 12 84 103 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 39 35 6 40 6 0 8 81 101 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 40 40 5 40 6 1 14 85 105 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 41 41 6 41 5 1 14 84 104 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 9 ] 8 74 C G - - MP 42 41 6 46 4 2 14 83 103 -6.579 -7.825 -0.099 -4.278 -3.992 -3.839 -3.771 -0.131 -2.626 -4.253 3.331 -3.377 -3.807 0.211 -4.122 -1.781 0.937 -4.094 -0.324 -2.668 ML 43 41 6 46 4 1 10 82 102 -2.408 -4.532 -1.293 -1.473 0.368 -0.385 -0.191 0.094 MR 44 41 6 46 4 1 11 82 102 -4.102 -12.528 -0.390 -2.485 0.368 -0.385 -0.191 0.094 D 45 41 6 46 4 0 8 80 100 -12.737 -14.007 -2.036 -0.404 IL 46 46 5 46 4 1 12 83 102 -2.817 -4.319 -0.613 -2.698 0.000 0.000 0.000 0.000 IR 47 47 6 47 3 1 13 83 103 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 10 ] - 73 - U - - MR 48 47 6 50 3 1 13 81 101 -8.087 -0.023 -6.405 -0.975 -1.066 -1.676 1.433 D 49 47 6 50 3 0 8 79 99 -6.390 -1.568 -0.620 IR 50 50 3 50 3 1 12 82 102 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 11 ] - 72 - A - - MR 51 50 3 53 3 1 13 80 100 -8.087 -0.023 -6.405 1.388 -1.411 -1.246 -0.773 D 52 50 3 53 3 0 7 78 98 -6.390 -1.568 -0.620 IR 53 53 3 53 3 1 11 81 101 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 12 ] - 71 - C - - MR 54 53 3 56 3 1 12 79 99 -8.087 -0.023 -6.405 -1.073 1.380 -1.863 -0.626 D 55 53 3 56 3 0 6 77 97 -6.390 -1.568 -0.620 IR 56 56 3 56 3 1 11 80 100 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 13 ] - 70 - U - - MR 57 56 3 59 3 1 11 78 98 -8.087 -0.023 -6.405 -0.975 -1.066 -1.676 1.433 D 58 56 3 59 3 0 6 76 96 -6.390 -1.568 -0.620 IR 59 59 3 59 3 1 10 79 99 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 14 ] - 69 - C - - MR 60 59 3 62 3 1 11 77 97 -8.087 -0.023 -6.405 -1.073 1.380 -1.863 -0.626 D 61 59 3 62 3 0 5 75 95 -6.390 -1.568 -0.620 IR 62 62 3 62 3 1 9 78 98 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 15 ] - 68 - c - - MR 63 62 3 65 3 1 10 76 96 -8.087 -0.023 -6.405 -0.667 0.973 -1.445 0.057 D 64 62 3 65 3 0 4 74 94 -6.390 -1.568 -0.620 IR 65 65 3 65 3 1 9 77 97 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 16 ] - 67 - A - - MR 66 65 3 68 5 1 10 75 95 -6.845 -0.046 -6.660 -6.873 -7.764 1.560 -1.802 -1.491 -1.293 D 67 65 3 68 5 0 4 74 94 -5.352 -0.707 -2.978 -4.409 -2.404 IR 68 68 3 68 5 1 7 75 95 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 17 ] 9 66 C G - - MP 69 68 3 73 6 2 11 74 94 -8.996 -8.935 -0.023 -7.712 -7.991 -8.386 -3.693 -3.602 -3.661 -0.115 -2.896 -2.677 3.375 -3.553 -3.717 0.283 -4.107 -1.721 0.668 -3.877 -0.695 -2.674 ML 70 68 3 73 6 1 6 73 92 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 71 68 3 73 6 1 5 72 92 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 72 68 3 73 6 0 1 70 90 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 73 73 5 73 6 1 7 74 94 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 74 74 6 74 5 1 7 73 93 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 18 ] 10 65 G C - - MP 75 74 6 79 6 2 10 72 92 -8.996 -8.935 -0.023 -7.712 -7.991 -8.386 -4.185 -2.833 -4.249 0.557 -4.448 -4.463 0.055 -4.439 -3.940 3.470 -4.321 -0.518 -0.349 -4.097 -1.956 -3.135 ML 76 74 6 79 6 1 5 71 90 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 77 74 6 79 6 1 5 70 90 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 78 74 6 79 6 0 1 68 88 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 79 79 5 79 6 1 6 72 92 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 80 80 6 80 5 1 7 71 91 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 19 ] 11 64 G C - - MP 81 80 6 85 6 2 9 70 90 -8.996 -8.935 -0.023 -7.712 -7.991 -8.386 -3.836 -2.738 -3.873 0.614 -4.011 -3.049 0.347 -4.196 -3.782 3.369 -4.140 -0.565 -0.012 -3.665 -1.608 -2.882 ML 82 80 6 85 6 1 5 69 89 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 83 80 6 85 6 1 4 69 88 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 84 80 6 85 6 0 1 66 86 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 85 85 5 85 6 1 6 70 90 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 86 86 6 86 5 1 6 69 89 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 20 ] 12 63 C G - - MP 87 86 6 91 6 2 8 68 88 -8.996 -8.935 -0.023 -7.712 -7.991 -8.386 -3.458 -3.406 -3.535 -0.091 -3.072 -3.171 3.420 -3.632 -3.594 0.243 -3.341 -1.638 0.434 -3.707 -0.999 -2.632 ML 88 86 6 91 6 1 4 67 87 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 89 86 6 91 6 1 3 67 87 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 90 86 6 91 6 0 1 65 85 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 91 91 5 91 6 1 5 68 88 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 92 92 6 92 5 1 5 67 87 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 21 ] 13 62 G C - - MP 93 92 6 97 4 2 6 66 86 -6.635 -6.842 -0.066 -5.256 -3.544 -2.485 -3.589 1.406 -3.935 -4.263 0.490 -3.858 -3.528 3.090 -3.967 0.003 0.175 -3.633 -1.483 -2.498 ML 94 92 6 97 4 1 3 66 86 -3.758 -3.940 -0.507 -2.670 0.368 -0.385 -0.191 0.094 MR 95 92 6 97 4 1 2 66 86 -4.809 -3.838 -1.706 -0.766 0.368 -0.385 -0.191 0.094 D 96 92 6 97 4 0 0 65 85 -4.568 -4.250 -2.265 -0.520 IL 97 97 5 97 4 1 5 68 88 -1.686 -2.369 -1.117 -4.855 0.000 0.000 0.000 0.000 IR 98 98 6 98 3 1 4 67 87 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 22 ] 14 - u - - - ML 99 98 6 101 5 1 5 64 83 -6.845 -0.046 -6.660 -6.873 -7.764 -0.026 -0.364 -0.402 0.570 D 100 98 6 101 5 0 0 62 82 -4.959 -0.803 -4.221 -2.596 -2.508 IL 101 101 3 101 5 1 3 64 84 -2.408 -0.496 -4.087 -5.920 -5.193 0.000 0.000 0.000 0.000 [ MATP 23 ] 15 61 a u - - MP 102 101 3 106 6 2 7 63 82 -8.996 -8.935 -0.023 -7.712 -7.991 -8.386 -2.830 -2.508 -2.915 2.718 -2.835 -3.830 1.129 -1.132 -2.964 1.306 -3.486 -0.447 0.779 -3.134 -0.706 -1.974 ML 103 101 3 106 6 1 2 61 81 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 104 101 3 106 6 1 2 61 81 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 105 101 3 106 6 0 0 59 78 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 106 106 5 106 6 1 2 62 82 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 107 107 6 107 5 1 3 62 82 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 24 ] 16 60 g u - - MP 108 107 6 112 6 2 6 61 80 -8.996 -8.935 -0.023 -7.712 -7.991 -8.386 -3.193 -2.182 -3.317 1.478 -3.774 -4.399 0.526 -3.474 -3.157 2.141 -3.658 2.226 0.227 -3.645 -1.401 -2.152 ML 109 107 6 112 6 1 2 59 79 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 110 107 6 112 6 1 2 59 79 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 111 107 6 112 6 0 0 57 76 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 112 112 5 112 6 1 2 60 80 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 113 113 6 113 5 1 2 60 80 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 25 ] 17 59 g c - - MP 114 113 6 118 6 2 6 59 78 -8.996 -8.935 -0.023 -7.712 -7.991 -8.386 -1.201 -1.474 -1.668 1.325 -2.029 -2.816 1.394 -2.350 -1.599 1.986 -2.627 -0.199 1.198 -2.107 -0.167 -1.214 ML 115 113 6 118 6 1 1 57 77 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 116 113 6 118 6 1 1 57 77 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 117 113 6 118 6 0 0 55 74 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 118 118 5 118 6 1 2 58 78 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 119 119 6 119 5 1 2 58 78 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 26 ] 18 58 u g - - MP 120 119 6 124 6 2 6 57 76 -8.996 -8.935 -0.023 -7.712 -7.991 -8.386 -3.539 -3.431 -3.364 0.177 -2.312 -3.884 1.957 -3.024 -3.400 0.473 -3.751 -1.449 1.195 -3.673 2.542 -2.301 ML 121 119 6 124 6 1 1 55 75 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 122 119 6 124 6 1 1 55 75 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 123 119 6 124 6 0 0 53 72 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 124 124 5 124 6 1 2 56 76 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 125 125 6 125 5 1 2 56 76 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 27 ] 19 57 C G - - MP 126 125 6 130 6 2 5 55 74 -8.996 -8.935 -0.023 -7.712 -7.991 -8.386 -3.992 -3.839 -3.771 -0.131 -2.626 -4.253 3.331 -3.377 -3.807 0.211 -4.122 -1.781 0.937 -4.094 -0.324 -2.668 ML 127 125 6 130 6 1 1 53 73 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 128 125 6 130 6 1 1 53 73 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 129 125 6 130 6 0 0 51 70 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 130 130 5 130 6 1 2 54 74 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 131 131 6 131 5 1 2 54 74 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 28 ] 20 56 g c - - MP 132 131 6 136 6 2 5 53 72 -8.996 -8.935 -0.023 -7.712 -7.991 -8.386 -1.788 -1.608 -1.977 1.392 -1.993 -1.157 1.402 -1.687 -2.027 1.823 -2.542 -0.096 1.222 -1.856 -0.135 -1.184 ML 133 131 6 136 6 1 1 51 71 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 134 131 6 136 6 1 1 51 71 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 135 131 6 136 6 0 0 49 68 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 136 136 5 136 6 1 1 52 72 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 137 137 6 137 5 1 2 52 72 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 29 ] 21 55 C G - - MP 138 137 6 142 6 2 5 51 70 -8.996 -8.935 -0.023 -7.712 -7.991 -8.386 -3.992 -3.839 -3.771 -0.131 -2.626 -4.253 3.331 -3.377 -3.807 0.211 -4.122 -1.781 0.937 -4.094 -0.324 -2.668 ML 139 137 6 142 6 1 1 49 69 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 140 137 6 142 6 1 1 49 69 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 141 137 6 142 6 0 0 47 67 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 142 142 5 142 6 1 1 50 70 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 143 143 6 143 5 1 1 50 70 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 30 ] 22 54 g u - - MP 144 143 6 148 6 2 4 49 68 -8.996 -8.935 -0.023 -7.712 -7.991 -8.386 -2.828 -2.016 -2.998 1.269 -3.091 -3.801 1.048 -1.822 -2.858 1.717 -3.295 2.159 0.687 -3.196 -0.842 -1.907 ML 145 143 6 148 6 1 1 48 67 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 146 143 6 148 6 1 1 48 67 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 147 143 6 148 6 0 0 46 66 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 148 148 5 148 6 1 1 48 68 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 149 149 6 149 5 1 1 48 68 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 31 ] 23 53 c g - - MP 150 149 6 154 4 2 2 47 66 -6.635 -6.842 -0.066 -5.256 -1.638 -1.596 -1.831 1.155 -1.476 -2.193 2.003 -1.387 -1.884 1.089 -2.049 -0.378 1.429 -1.967 0.049 -1.065 ML 151 149 6 154 4 1 1 47 67 -3.758 -3.940 -0.507 -2.670 0.368 -0.385 -0.191 0.094 MR 152 149 6 154 4 1 1 46 66 -4.809 -3.838 -1.706 -0.766 0.368 -0.385 -0.191 0.094 D 153 149 6 154 4 0 0 45 65 -4.568 -4.250 -2.265 -0.520 IL 154 154 5 154 4 1 1 48 68 -1.686 -2.369 -1.117 -4.855 0.000 0.000 0.000 0.000 IR 155 155 6 155 3 1 1 47 67 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 32 ] 24 - A - - - ML 156 155 6 158 3 1 1 44 63 -7.676 -0.025 -6.330 1.560 -1.802 -1.491 -1.293 D 157 155 6 158 3 0 0 43 62 -6.174 -1.687 -0.566 IL 158 158 3 158 3 1 1 46 66 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 33 ] 25 - A - - - ML 159 158 3 161 3 1 1 43 62 -7.676 -0.025 -6.330 1.560 -1.802 -1.491 -1.293 D 160 158 3 161 3 0 0 42 61 -6.174 -1.687 -0.566 IL 161 161 3 161 3 1 1 45 65 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 34 ] 26 - u - - - ML 162 161 3 164 3 1 1 42 61 -7.676 -0.025 -6.330 -0.540 -0.116 -1.268 0.981 D 163 161 3 164 3 0 0 41 60 -6.174 -1.687 -0.566 IL 164 164 3 164 3 1 1 44 64 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 35 ] 27 - u - - - ML 165 164 3 167 3 1 1 41 60 -7.676 -0.025 -6.330 -0.338 -0.353 -0.962 0.936 D 166 164 3 167 3 0 0 40 59 -6.174 -1.687 -0.566 IL 167 167 3 167 3 1 1 43 63 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 36 ] 28 - U - - - ML 168 167 3 170 3 1 1 40 59 -8.087 -0.023 -6.405 -0.975 -1.066 -1.676 1.433 D 169 167 3 170 3 0 0 39 58 -5.620 -0.734 -1.403 IL 170 170 3 170 3 1 1 41 60 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 37 ] - 52 - C - - MR 171 170 3 173 3 1 1 39 58 -8.087 -0.023 -6.405 -1.073 1.380 -1.863 -0.626 D 172 170 3 173 3 0 0 37 56 -6.390 -1.568 -0.620 IR 173 173 3 173 3 1 1 40 59 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 38 ] - 51 - A - - MR 174 173 3 176 3 1 1 38 57 -8.087 -0.023 -6.405 1.560 -1.802 -1.491 -1.293 D 175 173 3 176 3 0 0 36 55 -6.390 -1.568 -0.620 IR 176 176 3 176 3 1 1 39 58 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 39 ] - 50 - a - - MR 177 176 3 179 3 1 1 37 56 -8.087 -0.023 -6.405 0.308 -0.071 -0.600 0.203 D 178 176 3 179 3 0 0 35 54 -6.390 -1.568 -0.620 IR 179 179 3 179 3 1 1 38 57 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 40 ] - 49 - U - - MR 180 179 3 182 5 1 1 36 55 -6.845 -0.046 -6.660 -6.873 -7.764 -0.975 -1.066 -1.676 1.433 D 181 179 3 182 5 0 0 34 54 -5.352 -0.707 -2.978 -4.409 -2.404 IR 182 182 3 182 5 1 1 36 55 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 41 ] 29 48 g c - - MP 183 182 3 187 6 2 2 35 54 -8.996 -8.935 -0.023 -7.712 -7.991 -8.386 -2.260 -2.155 -2.566 1.237 -2.139 -3.351 1.389 -2.858 -2.033 2.416 -3.173 -0.157 1.102 -2.642 -0.421 -1.665 ML 184 182 3 187 6 1 1 33 52 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 185 182 3 187 6 1 1 33 52 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 186 182 3 187 6 0 0 31 50 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 187 187 5 187 6 1 1 34 54 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 188 188 6 188 5 1 1 34 53 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 42 ] 30 47 G C - - MP 189 188 6 193 6 2 2 33 52 -8.996 -8.935 -0.023 -7.712 -7.991 -8.386 -4.185 -2.833 -4.249 0.557 -4.448 -4.463 0.055 -4.439 -3.940 3.470 -4.321 -0.518 -0.349 -4.097 -1.956 -3.135 ML 190 188 6 193 6 1 1 31 50 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 191 188 6 193 6 1 1 31 50 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 192 188 6 193 6 0 0 29 48 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 193 193 5 193 6 1 1 32 52 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 194 194 6 194 5 1 1 32 51 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 43 ] 31 46 G C - - MP 195 194 6 199 6 2 2 31 50 -8.996 -8.935 -0.023 -7.712 -7.991 -8.386 -4.185 -2.833 -4.249 0.557 -4.448 -4.463 0.055 -4.439 -3.940 3.470 -4.321 -0.518 -0.349 -4.097 -1.956 -3.135 ML 196 194 6 199 6 1 1 29 49 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 197 194 6 199 6 1 1 29 49 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 198 194 6 199 6 0 0 27 46 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 199 199 5 199 6 1 1 30 50 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 200 200 6 200 5 1 1 30 49 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 44 ] 32 45 u a - - MP 201 200 6 205 6 2 2 29 48 -8.996 -8.935 -0.023 -7.712 -7.991 -8.386 -3.185 -3.143 -3.219 0.404 -1.914 -3.940 1.681 -3.125 -3.240 0.676 -3.718 -1.241 2.867 -3.404 -0.289 -1.830 ML 202 200 6 205 6 1 1 28 47 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 203 200 6 205 6 1 1 28 47 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 204 200 6 205 6 0 0 26 45 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 205 205 5 205 6 1 1 29 48 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 206 206 6 206 5 1 1 28 47 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 45 ] 33 44 a u - - MP 207 206 6 211 4 2 2 27 46 -6.635 -6.842 -0.066 -5.256 -2.941 -0.937 -3.030 2.638 -3.265 -4.035 0.785 -3.261 -3.033 1.830 -3.553 -0.008 0.503 -3.270 -1.055 -2.012 ML 208 206 6 211 4 1 1 27 47 -3.758 -3.940 -0.507 -2.670 0.368 -0.385 -0.191 0.094 MR 209 206 6 211 4 1 1 27 46 -4.809 -3.838 -1.706 -0.766 0.368 -0.385 -0.191 0.094 D 210 206 6 211 4 0 0 26 45 -4.568 -4.250 -2.265 -0.520 IL 211 211 5 211 4 1 1 29 48 -1.686 -2.369 -1.117 -4.855 0.000 0.000 0.000 0.000 IR 212 212 6 212 3 1 1 28 47 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 46 ] 34 - A - - - ML 213 212 6 215 3 1 1 24 43 -7.676 -0.025 -6.330 1.423 -1.543 -1.045 -1.025 D 214 212 6 215 3 0 0 23 42 -6.174 -1.687 -0.566 IL 215 215 3 215 3 1 1 26 46 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 47 ] 35 - G - - - ML 216 215 3 218 3 1 1 23 42 -8.087 -0.023 -6.405 0.028 -1.405 1.019 -0.797 D 217 215 3 218 3 0 0 22 40 -5.620 -0.734 -1.403 IL 218 218 3 218 3 1 1 24 43 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 48 ] - 43 - A - - MR 219 218 3 221 3 1 1 22 41 -8.087 -0.023 -6.405 1.560 -1.802 -1.491 -1.293 D 220 218 3 221 3 0 0 20 39 -6.390 -1.568 -0.620 IR 221 221 3 221 3 1 1 23 42 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 49 ] - 42 - G - - MR 222 221 3 224 5 1 1 21 40 -6.845 -0.046 -6.660 -6.873 -7.764 -0.581 -1.416 1.286 -0.949 D 223 221 3 224 5 0 0 20 39 -5.352 -0.707 -2.978 -4.409 -2.404 IR 224 224 3 224 5 1 1 21 40 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 50 ] 36 41 G C - - MP 225 224 3 229 4 2 2 20 39 -6.635 -6.842 -0.066 -5.256 -4.185 -2.833 -4.249 0.557 -4.448 -4.463 0.055 -4.439 -3.940 3.470 -4.321 -0.518 -0.349 -4.097 -1.956 -3.135 ML 226 224 3 229 4 1 1 21 39 -3.758 -3.940 -0.507 -2.670 0.368 -0.385 -0.191 0.094 MR 227 224 3 229 4 1 1 20 39 -4.809 -3.838 -1.706 -0.766 0.368 -0.385 -0.191 0.094 D 228 224 3 229 4 0 0 19 38 -4.568 -4.250 -2.265 -0.520 IL 229 229 5 229 4 1 1 22 41 -1.686 -2.369 -1.117 -4.855 0.000 0.000 0.000 0.000 IR 230 230 6 230 3 1 1 21 40 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 51 ] 37 - U - - - ML 231 230 6 233 3 1 1 16 35 -7.676 -0.025 -6.330 -0.975 -1.066 -1.676 1.433 D 232 230 6 233 3 0 0 16 34 -6.174 -1.687 -0.566 IL 233 233 3 233 3 1 1 20 38 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 52 ] 38 - C - - - ML 234 233 3 236 3 1 1 15 33 -7.676 -0.025 -6.330 -0.688 1.141 -1.320 -0.370 D 235 233 3 236 3 0 0 15 33 -6.174 -1.687 -0.566 IL 236 236 3 236 3 1 1 19 37 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 53 ] 39 - A - - - ML 237 236 3 239 3 1 1 13 32 -7.676 -0.025 -6.330 1.489 -1.655 -1.239 -1.145 D 238 236 3 239 3 0 0 13 32 -6.174 -1.687 -0.566 IL 239 239 3 239 3 1 1 18 36 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 54 ] 40 - U - - - ML 240 239 3 242 2 1 1 1 1 * 0.000 -0.975 -1.066 -1.676 1.433 D 241 239 3 242 2 0 0 0 0 * 0.000 IL 242 242 3 242 2 1 1 13 28 -1.823 -0.479 0.000 0.000 0.000 0.000 [ END 55 ] - - - - - - E 243 242 3 -1 0 0 0 0 0 // HMMER3/f [3.4 | Aug 2023] NAME HCV_SL669 ACC RF04221 DESC SL669 non-coding RNA LENG 80 MAXL 170 ALPH RNA RF no MM no CONS yes CS yes MAP yes DATE Tue Jul 9 03:43:45 2024 COM [1] /hps/software/users/agb/rfam/bin/cmbuild -F CM SEED COM [2] /hps/software/users/agb/rfam/bin/cmcalibrate --cpu 8 /homes/nancyontiveros/HCV_07.2023/core_SLV-SL833_rfam_RF04221/RF04221/CM NSEQ 57 EFFN 2.076965 CKSUM 403927863 STATS LOCAL MSV -8.6274 0.71896 STATS LOCAL VITERBI -9.4483 0.71896 STATS LOCAL FORWARD -3.3152 0.71896 HMM A C G U m->m m->i m->d i->m i->i d->m d->d COMPO 1.51369 1.28523 1.30662 1.45850 1.38629 1.38629 1.38629 1.38629 0.04289 3.86368 3.86368 1.46634 0.26236 0.00000 * 1 0.88734 1.26778 2.17436 1.64448 1 a - - : 1.38629 1.38629 1.38629 1.38629 0.04289 3.86368 3.86368 1.46634 0.26236 1.09861 0.40547 2 1.46298 1.59256 2.00567 0.84286 2 u - - : 1.38629 1.38629 1.38629 1.38629 0.04289 3.86368 3.86368 1.46634 0.26236 1.09861 0.40547 3 2.37463 3.05342 0.21382 2.95150 3 G - - < 1.38629 1.38629 1.38629 1.38629 0.04289 3.86368 3.86368 1.46634 0.26236 1.09861 0.40547 4 0.40275 2.60855 1.71901 2.54295 4 A - - < 1.38629 1.38629 1.38629 1.38629 0.04289 3.86368 3.86368 1.46634 0.26236 1.09861 0.40547 5 2.79101 0.41096 2.54350 1.62437 5 C - - < 1.38629 1.38629 1.38629 1.38629 0.04289 3.86368 3.86368 1.46634 0.26236 1.09861 0.40547 6 3.05607 0.27604 2.81798 2.00682 6 C - - < 1.38629 1.38629 1.38629 1.38629 0.04289 3.86368 3.86368 1.46634 0.26236 1.09861 0.40547 7 3.05840 0.27574 2.81905 2.00721 7 C - - < 1.38629 1.38629 1.38629 1.38629 0.04289 3.86368 3.86368 1.46634 0.26236 1.09861 0.40547 8 3.05925 0.27563 2.81943 2.00736 8 C - - < 1.38629 1.38629 1.38629 1.38629 0.04289 3.86368 3.86368 1.46634 0.26236 1.09861 0.40547 9 3.17096 0.20799 2.93085 2.38088 9 C - - < 1.38629 1.38629 1.38629 1.38629 0.04289 3.86368 3.86368 1.46634 0.26236 1.09861 0.40547 10 2.49994 3.10265 0.19198 3.04379 10 G - - < 1.38629 1.38629 1.38629 1.38629 0.04289 3.86368 3.86368 1.46634 0.26236 1.09861 0.40547 11 2.37982 2.73674 0.24984 2.75311 11 G - - < 1.38629 1.38629 1.38629 1.38629 0.04289 3.86368 3.86368 1.46634 0.26236 1.09861 0.40547 12 3.22494 0.17191 2.99184 2.68838 12 C - - < 1.38629 1.38629 1.38629 1.38629 0.04289 3.86368 3.86368 1.46634 0.26236 1.09861 0.40547 13 1.66111 2.57301 0.43455 2.45096 13 G - - < 1.38629 1.38629 1.38629 1.38629 0.04289 3.86368 3.86368 1.46634 0.26236 1.09861 0.40547 14 1.44837 1.65727 1.65578 0.95856 14 u - - - 1.38629 1.38629 1.38629 1.38629 0.04289 3.86368 3.86368 1.46634 0.26236 1.09861 0.40547 15 0.52527 1.98958 1.85798 2.15536 15 A - - < 1.38629 1.38629 1.38629 1.38629 0.04289 3.86368 3.86368 1.46634 0.26236 1.09861 0.40547 16 1.66280 2.67835 0.41383 2.51819 16 G - - < 1.38629 1.38629 1.38629 1.38629 0.04289 3.86368 3.86368 1.46634 0.26236 1.09861 0.40547 17 1.45091 1.63667 1.09323 1.44443 17 g - - < 1.38629 1.38629 1.38629 1.38629 0.04289 3.86368 3.86368 1.46634 0.26236 1.09861 0.40547 18 2.81935 1.51377 2.59348 0.43770 18 U - - < 1.38629 1.38629 1.38629 1.38629 0.04289 3.86368 3.86368 1.46634 0.26236 1.09861 0.40547 19 3.06172 0.27532 2.82056 2.00777 19 C - - < 1.38629 1.38629 1.38629 1.38629 0.04289 3.86368 3.86368 1.46634 0.26236 1.09861 0.40547 20 1.50275 1.46431 1.18190 1.42899 20 g - - < 1.38629 1.38629 1.38629 1.38629 0.04289 3.86368 3.86368 1.46634 0.26236 1.09861 0.40547 21 3.06046 0.27548 2.81998 2.00756 21 C - - < 1.38629 1.38629 1.38629 1.38629 0.04289 3.86368 3.86368 1.46634 0.26236 1.09861 0.40547 22 1.82888 2.08921 0.50559 2.18505 22 G - - < 1.38629 1.38629 1.38629 1.38629 0.04289 3.86368 3.86368 1.46634 0.26236 1.09861 0.40547 23 1.60487 1.15874 1.57153 1.28203 23 c - - < 1.38629 1.38629 1.38629 1.38629 0.04289 3.86368 3.86368 1.46634 0.26236 1.09861 0.40547 24 0.17889 3.10751 2.84464 2.79798 24 A - - - 1.38629 1.38629 1.38629 1.38629 0.04289 3.86368 3.86368 1.46634 0.26236 1.09861 0.40547 25 0.17889 3.10751 2.84464 2.79798 25 A - - - 1.38629 1.38629 1.38629 1.38629 0.04289 3.86368 3.86368 1.46634 0.26236 1.09861 0.40547 26 1.96644 1.46445 2.48908 0.60540 26 U - - - 1.38629 1.38629 1.38629 1.38629 0.04289 3.86368 3.86368 1.46634 0.26236 1.09861 0.40547 27 1.76983 1.67864 2.18994 0.63283 27 U - - - 1.38629 1.38629 1.38629 1.38629 0.04289 3.86368 3.86368 1.46634 0.26236 1.09861 0.40547 28 2.48730 2.47234 2.99933 0.24506 28 U - - - 1.38629 1.38629 1.38629 1.38629 0.04289 3.86368 3.86368 1.46634 0.26236 1.09861 0.40547 29 1.69692 1.76884 0.78274 1.66562 29 g - - < 1.38629 1.38629 1.38629 1.38629 0.04289 3.86368 3.86368 1.46634 0.26236 1.09861 0.40547 30 2.50074 3.10355 0.19177 3.04506 30 G - - < 1.38629 1.38629 1.38629 1.38629 0.04289 3.86368 3.86368 1.46634 0.26236 1.09861 0.40547 31 2.50124 3.10411 0.19165 3.04584 31 G - - < 1.38629 1.38629 1.38629 1.38629 0.04289 3.86368 3.86368 1.46634 0.26236 1.09861 0.40547 32 2.58669 1.77592 2.36667 0.41308 32 U - - < 1.38629 1.38629 1.38629 1.38629 0.04289 3.86368 3.86368 1.46634 0.26236 1.09861 0.40547 33 0.57302 2.40933 1.42073 2.25602 33 A - - < 1.38629 1.38629 1.38629 1.38629 0.04289 3.86368 3.86368 1.46634 0.26236 1.09861 0.40547 34 0.27967 2.78694 2.32941 2.46508 34 A - - - 1.38629 1.38629 1.38629 1.38629 0.04289 3.86368 3.86368 1.46634 0.26236 1.09861 0.40547 35 1.45227 2.63353 0.53432 2.22498 35 G - - - 1.38629 1.38629 1.38629 1.38629 0.04289 3.86368 3.86368 1.46634 0.26236 1.09861 0.40547 36 2.49932 3.10197 0.19213 3.04282 36 G - - < 1.38629 1.38629 1.38629 1.38629 0.04289 3.86368 3.86368 1.46634 0.26236 1.09861 0.40547 37 2.48730 2.47234 2.99933 0.24506 37 U - - _ 1.38629 1.38629 1.38629 1.38629 0.04289 3.86368 3.86368 1.46634 0.26236 1.09861 0.40547 38 2.25244 0.38316 2.64462 1.95106 38 C - - _ 1.38629 1.38629 1.38629 1.38629 0.04289 3.86368 3.86368 1.46634 0.26236 1.09861 0.40547 39 0.23053 2.92055 2.54654 2.60869 39 A - - _ 1.38629 1.38629 1.38629 1.38629 0.04289 3.86368 3.86368 1.46634 0.26236 1.09861 0.40547 40 2.48730 2.47234 2.99933 0.24506 40 U - - _ 1.38629 1.38629 1.38629 1.38629 0.04289 3.86368 3.86368 1.46634 0.26236 1.09861 0.40547 41 3.26828 0.22446 2.94240 2.20507 41 C - - > 1.38629 1.38629 1.38629 1.38629 0.04289 3.86368 3.86368 1.46634 0.26236 1.09861 0.40547 42 2.10745 2.64752 0.33030 2.42004 42 G - - - 1.38629 1.38629 1.38629 1.38629 0.04289 3.86368 3.86368 1.46634 0.26236 1.09861 0.40547 43 0.17889 3.10751 2.84464 2.79798 43 A - - - 1.38629 1.38629 1.38629 1.38629 0.04289 3.86368 3.86368 1.46634 0.26236 1.09861 0.40547 44 2.47984 1.48700 2.21402 0.54312 44 U - - > 1.38629 1.38629 1.38629 1.38629 0.04289 3.86368 3.86368 1.46634 0.26236 1.09861 0.40547 45 0.46065 2.53495 1.64953 2.32563 45 A - - > 1.38629 1.38629 1.38629 1.38629 0.04289 3.86368 3.86368 1.46634 0.26236 1.09861 0.40547 46 3.25983 0.22533 2.93883 2.20345 46 C - - > 1.38629 1.38629 1.38629 1.38629 0.04289 3.86368 3.86368 1.46634 0.26236 1.09861 0.40547 47 3.26330 0.22497 2.94030 2.20412 47 C - - > 1.38629 1.38629 1.38629 1.38629 0.04289 3.86368 3.86368 1.46634 0.26236 1.09861 0.40547 48 1.79796 0.89884 1.61015 1.48077 48 c - - > 1.38629 1.38629 1.38629 1.38629 0.04289 3.86368 3.86368 1.46634 0.26236 1.09861 0.40547 49 2.48730 2.47234 2.99933 0.24506 49 U - - - 1.38629 1.38629 1.38629 1.38629 0.04289 3.86368 3.86368 1.46634 0.26236 1.09861 0.40547 50 1.16206 1.39341 1.83933 1.27294 50 a - - - 1.38629 1.38629 1.38629 1.38629 0.04289 3.86368 3.86368 1.46634 0.26236 1.09861 0.40547 51 0.17889 3.10751 2.84464 2.79798 51 A - - - 1.38629 1.38629 1.38629 1.38629 0.04289 3.86368 3.86368 1.46634 0.26236 1.09861 0.40547 52 2.68660 0.23663 3.26017 2.26122 52 C - - - 1.38629 1.38629 1.38629 1.38629 0.04289 3.86368 3.86368 1.46634 0.26236 1.09861 0.40547 53 1.46673 1.71218 1.06960 1.40363 53 g - - > 1.38629 1.38629 1.38629 1.38629 0.04289 3.86368 3.86368 1.46634 0.26236 1.09861 0.40547 54 2.40494 1.71143 2.06367 0.50727 54 U - - > 1.38629 1.38629 1.38629 1.38629 0.04289 3.86368 3.86368 1.46634 0.26236 1.09861 0.40547 55 2.28272 2.98669 0.23844 2.81872 55 G - - > 1.38629 1.38629 1.38629 1.38629 0.04289 3.86368 3.86368 1.46634 0.26236 1.09861 0.40547 56 1.66642 1.20053 1.44308 1.29519 56 c - - > 1.38629 1.38629 1.38629 1.38629 0.04289 3.86368 3.86368 1.46634 0.26236 1.09861 0.40547 57 2.28280 2.98680 0.23841 2.81885 57 G - - > 1.38629 1.38629 1.38629 1.38629 0.04289 3.86368 3.86368 1.46634 0.26236 1.09861 0.40547 58 2.03810 2.76743 0.31487 2.56372 58 G - - > 1.38629 1.38629 1.38629 1.38629 0.04289 3.86368 3.86368 1.46634 0.26236 1.09861 0.40547 59 1.55068 1.21156 1.40805 1.40429 59 c - - > 1.38629 1.38629 1.38629 1.38629 0.04289 3.86368 3.86368 1.46634 0.26236 1.09861 0.40547 60 2.72499 1.39609 2.47740 0.50596 60 U - - > 1.38629 1.38629 1.38629 1.38629 0.04289 3.86368 3.86368 1.46634 0.26236 1.09861 0.40547 61 2.37530 2.06750 2.05264 0.42753 61 U - - > 1.38629 1.38629 1.38629 1.38629 0.04289 3.86368 3.86368 1.46634 0.26236 1.09861 0.40547 62 2.68486 0.51581 2.38902 1.41457 62 C - - > 1.38629 1.38629 1.38629 1.38629 0.04289 3.86368 3.86368 1.46634 0.26236 1.09861 0.40547 63 2.90244 3.12490 0.15807 3.04949 63 G - - > 1.38629 1.38629 1.38629 1.38629 0.04289 3.86368 3.86368 1.46634 0.26236 1.09861 0.40547 64 2.98291 0.27718 2.66382 2.10576 64 C - - > 1.38629 1.38629 1.38629 1.38629 0.04289 3.86368 3.86368 1.46634 0.26236 1.09861 0.40547 65 3.26228 0.22507 2.93987 2.20392 65 C - - > 1.38629 1.38629 1.38629 1.38629 0.04289 3.86368 3.86368 1.46634 0.26236 1.09861 0.40547 66 2.63337 2.95075 0.19216 2.98201 66 G - - > 1.38629 1.38629 1.38629 1.38629 0.04289 3.86368 3.86368 1.46634 0.26236 1.09861 0.40547 67 0.17889 3.10751 2.84464 2.79798 67 A - - - 1.38629 1.38629 1.38629 1.38629 0.04289 3.86368 3.86368 1.46634 0.26236 1.09861 0.40547 68 2.13431 0.54284 2.70599 1.45341 68 C - - - 1.38629 1.38629 1.38629 1.38629 0.04289 3.86368 3.86368 1.46634 0.26236 1.09861 0.40547 69 2.68660 0.23663 3.26017 2.26122 69 C - - - 1.38629 1.38629 1.38629 1.38629 0.04289 3.86368 3.86368 1.46634 0.26236 1.09861 0.40547 70 2.48730 2.47234 2.99933 0.24506 70 U - - - 1.38629 1.38629 1.38629 1.38629 0.04289 3.86368 3.86368 1.46634 0.26236 1.09861 0.40547 71 2.68660 0.23663 3.26017 2.26122 71 C - - - 1.38629 1.38629 1.38629 1.38629 0.04289 3.86368 3.86368 1.46634 0.26236 1.09861 0.40547 72 0.30486 2.64586 2.53795 2.18214 72 A - - - 1.38629 1.38629 1.38629 1.38629 0.04289 3.86368 3.86368 1.46634 0.26236 1.09861 0.40547 73 2.48730 2.47234 2.99933 0.24506 73 U - - - 1.38629 1.38629 1.38629 1.38629 0.04289 3.86368 3.86368 1.46634 0.26236 1.09861 0.40547 74 2.28310 2.98719 0.23831 2.81933 74 G - - > 1.38629 1.38629 1.38629 1.38629 0.04289 3.86368 3.86368 1.46634 0.26236 1.09861 0.40547 75 2.28345 2.98765 0.23819 2.81990 75 G - - > 1.38629 1.38629 1.38629 1.38629 0.04289 3.86368 3.86368 1.46634 0.26236 1.09861 0.40547 76 2.28391 2.98824 0.23804 2.82063 76 G - - > 1.38629 1.38629 1.38629 1.38629 0.04289 3.86368 3.86368 1.46634 0.26236 1.09861 0.40547 77 1.85940 2.71051 0.35617 2.55903 77 G - - > 1.38629 1.38629 1.38629 1.38629 0.04289 3.86368 3.86368 1.46634 0.26236 1.09861 0.40547 78 2.78419 1.99915 2.42946 0.33591 78 U - - > 1.38629 1.38629 1.38629 1.38629 0.04289 3.86368 3.86368 1.46634 0.26236 1.09861 0.40547 79 0.17889 3.10751 2.84464 2.79798 79 A - - - 1.38629 1.38629 1.38629 1.38629 0.04289 3.86368 3.86368 1.46634 0.26236 1.09861 0.40547 80 3.15545 0.26689 2.87561 2.00067 80 C - - > 1.38629 1.38629 1.38629 1.38629 0.02167 3.84246 * 1.46634 0.26236 0.00000 * //