INFERNAL1/a [1.1.5 | Sep 2023] NAME mir-753 ACC RF04089 DESC mir-753 microRNA precursor family STATES 190 NODES 39 CLEN 62 W 78 ALPH RNA RF no CONS yes MAP yes DATE Mon Jul 8 09:50:03 2024 COM [1] /hps/software/users/agb/rfam/bin/cmbuild -F CM SEED COM [2] /hps/software/users/agb/rfam/bin/cmcalibrate --cpu 8 /nfs/production/agb/rfam/15/rescan/families/RF04089/CM PBEGIN 0.05 PEND 0.05 WBETA 1e-07 QDBBETA1 1e-07 QDBBETA2 1e-15 N2OMEGA 1.52588e-05 N3OMEGA 1.52588e-05 ELSELF -0.08926734 NSEQ 5 EFFN 1.850586 CKSUM 2040845606 NULL 0.000 0.000 0.000 0.000 GA 62.00 TC 62.40 NC 59.90 EFP7GF -9.1184 0.71937 ECMLC 0.66445 -3.36546 5.01537 1600000 314495 0.003816 ECMGC 0.43192 -13.64087 0.41220 1600000 173033 0.002312 ECMLI 0.68838 -1.25813 6.39071 1600000 232209 0.005168 ECMGI 0.51435 -7.25209 3.76130 1600000 115399 0.003466 CM [ ROOT 0 ] - - - - - - S 0 -1 0 1 4 1 1 78 97 -6.915 -7.122 -0.425 -2.062 IL 1 1 2 1 4 1 8 82 102 -1.686 -2.369 -1.117 -4.855 0.000 0.000 0.000 0.000 IR 2 2 3 2 3 1 8 81 101 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 1 ] 1 - U - - - ML 3 2 3 5 3 1 7 78 97 -8.025 -0.024 -6.343 -0.864 -0.978 -1.555 1.380 D 4 2 3 5 3 0 3 76 96 -6.699 -0.842 -1.209 IL 5 5 3 5 3 1 6 78 98 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 2 ] - 63 - A - - MR 6 5 3 8 5 1 7 77 96 -6.940 -0.200 -6.755 -3.216 -7.859 1.630 -2.017 -1.684 -1.526 D 7 5 3 8 5 0 2 75 95 -5.853 -1.208 -3.480 -1.614 -2.905 IR 8 8 3 8 5 1 5 77 97 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 3 ] 2 62 a u - - MP 9 8 3 13 6 2 9 76 95 -8.972 -8.911 -0.023 -7.687 -7.967 -8.362 -3.288 -2.461 -3.334 2.851 -3.423 -4.457 0.851 -3.399 -3.254 1.636 -3.775 -0.033 0.426 -3.727 -1.096 -2.204 ML 10 8 3 13 6 1 3 74 94 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 11 8 3 13 6 1 4 74 93 -7.943 -6.672 -2.581 -6.650 -0.368 -4.864 -0.575 -0.756 -1.238 1.209 D 12 8 3 13 6 0 0 72 91 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 13 13 5 13 6 1 4 75 95 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 14 14 6 14 5 1 4 75 95 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 4 ] 3 61 u a - - MP 15 14 6 19 6 2 7 74 93 -8.972 -8.911 -0.023 -7.687 -7.967 -8.362 -3.550 -3.335 -3.452 0.315 -2.547 -4.070 1.762 -3.190 -3.466 0.702 -3.868 -1.249 2.892 -3.718 -0.239 -2.344 ML 16 14 6 19 6 1 3 72 92 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 17 14 6 19 6 1 3 72 91 -7.943 -6.672 -2.581 -6.650 -0.368 -4.864 1.355 -1.343 -1.073 -0.805 D 18 14 6 19 6 0 0 70 90 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 19 19 5 19 6 1 4 73 93 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 20 20 6 20 5 1 4 73 93 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 5 ] 4 60 u a - - MP 21 20 6 25 6 2 6 72 91 -8.972 -8.911 -0.023 -7.687 -7.967 -8.362 -3.550 -3.335 -3.452 0.315 -2.547 -4.070 1.762 -3.190 -3.466 0.702 -3.868 -1.249 2.892 -3.718 -0.239 -2.344 ML 22 20 6 25 6 1 2 71 91 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 23 20 6 25 6 1 2 70 90 -7.943 -6.672 -1.321 -6.650 -0.884 -4.864 1.355 -1.343 -1.073 -0.805 D 24 20 6 25 6 0 0 69 89 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 25 25 5 25 6 1 3 71 91 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 26 26 6 26 5 1 3 71 91 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 6 ] 5 59 U A - - MP 27 26 6 31 4 2 4 70 89 -6.742 -6.949 -0.061 -5.363 -3.815 -3.624 -3.693 0.051 -2.720 -4.290 1.598 -3.387 -3.702 0.371 -4.093 -1.534 3.112 -3.979 -0.405 -2.560 ML 28 26 6 31 4 1 1 70 90 -3.758 -3.940 -0.507 -2.670 0.368 -0.385 -0.191 0.094 MR 29 26 6 31 4 1 1 69 89 -5.452 -4.481 -0.847 -1.409 -0.211 0.679 -0.927 0.014 D 30 26 6 31 4 0 0 69 88 -4.568 -4.250 -2.265 -0.520 IL 31 31 5 31 4 1 3 71 91 -1.686 -2.369 -1.117 -4.855 0.000 0.000 0.000 0.000 IR 32 32 6 32 3 1 2 70 90 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 7 ] 6 - u - - - ML 33 32 6 35 3 1 3 67 86 -8.326 -0.019 -6.644 -0.057 -0.263 -1.121 0.804 D 34 32 6 35 3 0 0 66 85 -5.620 -0.734 -1.403 IL 35 35 3 35 3 1 1 68 87 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 8 ] - 58 - U - - MR 36 35 3 38 5 1 2 66 85 -3.442 -0.171 -6.882 -7.095 -7.986 -1.430 -1.436 -2.161 1.602 D 37 35 3 38 5 0 0 65 84 -5.352 -0.707 -2.978 -4.409 -2.404 IR 38 38 3 38 5 1 1 66 86 -2.711 -0.388 -6.222 -4.389 -5.495 0.000 0.000 0.000 0.000 [ MATP 9 ] 7 56 A U - - MP 39 38 3 43 4 2 2 65 84 -6.915 -7.122 -0.054 -5.536 -3.744 -2.788 -3.766 3.300 -4.081 -5.139 0.216 -3.812 -3.660 1.129 -4.205 -0.272 -0.202 -4.335 -1.725 -2.603 ML 40 38 3 43 4 1 1 65 85 -3.758 -3.940 -0.507 -2.670 0.368 -0.385 -0.191 0.094 MR 41 38 3 43 4 1 1 65 84 -4.809 -3.838 -1.706 -0.766 0.368 -0.385 -0.191 0.094 D 42 38 3 43 4 0 0 64 83 -4.568 -4.250 -2.265 -0.520 IL 43 43 5 43 4 1 1 67 86 -1.686 -2.369 -1.117 -4.855 0.000 0.000 0.000 0.000 IR 44 44 6 44 3 1 1 66 85 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 10 ] 8 - a - - - ML 45 44 6 47 3 1 1 62 81 -8.326 -0.019 -6.644 0.900 -1.359 0.217 -0.781 D 46 44 6 47 3 0 0 61 80 -5.620 -0.734 -1.403 IL 47 47 3 47 3 1 1 63 82 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 11 ] - 55 - C - - MR 48 47 3 50 5 1 1 61 80 -7.067 -0.040 -6.882 -7.095 -7.986 -1.668 1.604 -2.489 -1.097 D 49 47 3 50 5 0 0 60 79 -5.352 -0.707 -2.978 -4.409 -2.404 IR 50 50 3 50 5 1 1 62 81 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 12 ] 9 54 g u - - MP 51 50 3 55 6 2 2 60 79 -9.095 -9.034 -0.021 -7.811 -8.091 -8.486 -3.334 -2.320 -3.461 2.242 -4.058 -4.725 0.202 -3.626 -3.296 1.618 -3.827 2.253 -0.060 -3.881 -1.695 -2.283 ML 52 50 3 55 6 1 1 59 78 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 53 50 3 55 6 1 1 59 78 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 54 50 3 55 6 0 0 57 76 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 55 55 5 55 6 1 1 60 79 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 56 56 6 56 5 1 1 60 79 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 13 ] 10 53 G C - - MP 57 56 6 61 6 2 2 58 77 -9.095 -9.034 -0.021 -7.811 -8.091 -8.486 -4.686 -3.068 -4.781 0.237 -5.155 -4.672 -0.533 -5.019 -4.291 3.625 -4.632 -0.764 -0.920 -4.431 -2.567 -3.658 ML 58 56 6 61 6 1 1 57 76 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 59 56 6 61 6 1 1 57 76 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 60 56 6 61 6 0 0 54 74 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 61 61 5 61 6 1 1 58 77 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 62 62 6 62 5 1 1 58 77 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 14 ] 11 52 C G - - MP 63 62 6 67 6 2 2 56 75 -9.095 -9.034 -0.021 -7.811 -8.091 -8.486 -4.493 -4.393 -4.192 -0.631 -2.922 -4.611 3.533 -3.727 -4.239 -0.382 -4.506 -2.340 0.598 -4.565 -0.628 -3.081 ML 64 62 6 67 6 1 1 55 74 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 65 62 6 67 6 1 1 55 74 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 66 62 6 67 6 0 0 52 72 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 67 67 5 67 6 1 1 56 75 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 68 68 6 68 5 1 1 56 75 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 15 ] 12 51 U A - - MP 69 68 6 73 6 2 2 54 73 -9.095 -9.034 -0.021 -7.811 -8.091 -8.486 -4.130 -3.954 -3.975 -0.253 -2.930 -4.545 1.397 -3.622 -3.981 0.010 -4.357 -1.855 3.299 -4.284 -0.608 -2.811 ML 70 68 6 73 6 1 1 53 72 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 71 68 6 73 6 1 1 53 72 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 72 68 6 73 6 0 0 50 70 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 73 73 5 73 6 1 1 54 73 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 74 74 6 74 5 1 1 54 73 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 16 ] 13 50 U A - - MP 75 74 6 79 6 2 2 52 71 -9.095 -9.034 -0.021 -7.811 -8.091 -8.486 -4.130 -3.954 -3.975 -0.253 -2.930 -4.545 1.397 -3.622 -3.981 0.010 -4.357 -1.855 3.299 -4.284 -0.608 -2.811 ML 76 74 6 79 6 1 1 51 70 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 77 74 6 79 6 1 1 51 70 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 78 74 6 79 6 0 0 49 68 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 79 79 5 79 6 1 1 52 71 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 80 80 6 80 5 1 1 52 71 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 17 ] 14 49 G C - - MP 81 80 6 85 6 2 2 50 69 -9.095 -9.034 -0.021 -7.811 -8.091 -8.486 -4.686 -3.068 -4.781 0.237 -5.155 -4.672 -0.533 -5.019 -4.291 3.625 -4.632 -0.764 -0.920 -4.431 -2.567 -3.658 ML 82 80 6 85 6 1 1 49 68 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 83 80 6 85 6 1 1 49 68 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 84 80 6 85 6 0 0 47 66 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 85 85 5 85 6 1 1 50 69 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 86 86 6 86 5 1 1 50 69 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 18 ] 15 48 a u - - MP 87 86 6 91 6 2 2 48 67 -9.095 -9.034 -0.021 -7.811 -8.091 -8.486 -3.329 -2.322 -3.454 2.269 -4.044 -4.715 0.212 -3.622 -3.294 1.622 -3.826 2.216 -0.050 -3.871 -1.684 -2.279 ML 88 86 6 91 6 1 1 47 66 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 89 86 6 91 6 1 1 47 66 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 90 86 6 91 6 0 0 45 64 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 91 91 5 91 6 1 1 48 67 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 92 92 6 92 5 1 1 48 67 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 19 ] 16 47 A U - - MP 93 92 6 97 6 2 2 46 65 -9.095 -9.034 -0.021 -7.811 -8.091 -8.486 -3.744 -2.788 -3.766 3.300 -4.081 -5.139 0.216 -3.812 -3.660 1.129 -4.205 -0.272 -0.202 -4.335 -1.725 -2.603 ML 94 92 6 97 6 1 1 46 65 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 95 92 6 97 6 1 1 46 65 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 96 92 6 97 6 0 0 44 63 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 97 97 5 97 6 1 1 46 65 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 98 98 6 98 5 1 1 46 65 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 20 ] 17 46 u a - - MP 99 98 6 103 4 2 2 44 63 -6.915 -7.122 -0.054 -5.536 -3.531 -3.489 -3.463 0.157 -2.534 -4.081 1.764 -3.207 -3.483 0.401 -3.901 -1.536 2.808 -3.702 0.841 -2.382 ML 100 98 6 103 4 1 1 45 64 -3.758 -3.940 -0.507 -2.670 0.368 -0.385 -0.191 0.094 MR 101 98 6 103 4 1 1 45 64 -4.809 -3.838 -1.706 -0.766 0.368 -0.385 -0.191 0.094 D 102 98 6 103 4 0 0 44 63 -4.568 -4.250 -2.265 -0.520 IL 103 103 5 103 4 1 1 46 66 -1.686 -2.369 -1.117 -4.855 0.000 0.000 0.000 0.000 IR 104 104 6 104 3 1 1 45 64 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 21 ] 18 - U - - - ML 105 104 6 107 3 1 1 42 60 -8.326 -0.019 -6.644 -1.430 -1.436 -2.161 1.602 D 106 104 6 107 3 0 0 40 59 -5.620 -0.734 -1.403 IL 107 107 3 107 3 1 1 43 61 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 22 ] - 45 - U - - MR 108 107 3 110 5 1 1 41 59 -7.067 -0.040 -6.882 -7.095 -7.986 -1.430 -1.436 -2.161 1.602 D 109 107 3 110 5 0 0 39 58 -5.352 -0.707 -2.978 -4.409 -2.404 IR 110 110 3 110 5 1 1 41 60 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 23 ] 19 44 G U - - MP 111 110 3 115 6 2 2 40 58 -9.095 -9.034 -0.021 -7.811 -8.091 -8.486 -3.579 -2.363 -3.743 1.156 -4.428 -5.153 -0.041 -3.771 -3.415 1.408 -3.934 3.043 -0.400 -4.369 -1.983 -2.451 ML 112 110 3 115 6 1 1 38 57 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 113 110 3 115 6 1 1 38 57 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 114 110 3 115 6 0 0 36 55 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 115 115 5 115 6 1 1 39 58 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 116 116 6 116 5 1 1 39 58 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 24 ] 20 43 U A - - MP 117 116 6 121 6 2 2 38 56 -9.095 -9.034 -0.021 -7.811 -8.091 -8.486 -4.130 -3.954 -3.975 -0.253 -2.930 -4.545 1.397 -3.622 -3.981 0.010 -4.357 -1.855 3.299 -4.284 -0.608 -2.811 ML 118 116 6 121 6 1 1 36 55 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 119 116 6 121 6 1 1 36 55 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 120 116 6 121 6 0 0 34 53 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 121 121 5 121 6 1 1 37 56 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 122 122 6 122 5 1 1 37 56 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 25 ] 21 42 G C - - MP 123 122 6 127 6 2 2 36 54 -9.095 -9.034 -0.021 -7.811 -8.091 -8.486 -4.686 -3.068 -4.781 0.237 -5.155 -4.672 -0.533 -5.019 -4.291 3.625 -4.632 -0.764 -0.920 -4.431 -2.567 -3.658 ML 124 122 6 127 6 1 1 34 53 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 125 122 6 127 6 1 1 34 53 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 126 122 6 127 6 0 0 32 51 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 127 127 5 127 6 1 1 35 54 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 128 128 6 128 5 1 1 35 54 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 26 ] 22 41 A U - - MP 129 128 6 133 6 2 2 34 52 -9.095 -9.034 -0.021 -7.811 -8.091 -8.486 -3.744 -2.788 -3.766 3.300 -4.081 -5.139 0.216 -3.812 -3.660 1.129 -4.205 -0.272 -0.202 -4.335 -1.725 -2.603 ML 130 128 6 133 6 1 1 32 51 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 131 128 6 133 6 1 1 32 51 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 132 128 6 133 6 0 0 30 49 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 133 133 5 133 6 1 1 33 52 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 134 134 6 134 5 1 1 33 52 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 27 ] 23 40 U A - - MP 135 134 6 139 6 2 2 32 50 -9.095 -9.034 -0.021 -7.811 -8.091 -8.486 -4.130 -3.954 -3.975 -0.253 -2.930 -4.545 1.397 -3.622 -3.981 0.010 -4.357 -1.855 3.299 -4.284 -0.608 -2.811 ML 136 134 6 139 6 1 1 30 49 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 137 134 6 139 6 1 1 30 49 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 138 134 6 139 6 0 0 28 47 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 139 139 5 139 6 1 1 31 50 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 140 140 6 140 5 1 1 31 50 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 28 ] 24 39 C G - - MP 141 140 6 145 6 2 2 30 48 -9.095 -9.034 -0.021 -7.811 -8.091 -8.486 -4.493 -4.393 -4.192 -0.631 -2.922 -4.611 3.533 -3.727 -4.239 -0.382 -4.506 -2.340 0.598 -4.565 -0.628 -3.081 ML 142 140 6 145 6 1 1 28 47 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 143 140 6 145 6 1 1 28 47 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 144 140 6 145 6 0 0 26 45 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 145 145 5 145 6 1 1 29 48 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 146 146 6 146 5 1 1 29 48 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 29 ] 25 38 U A - - MP 147 146 6 151 6 2 2 28 46 -9.095 -9.034 -0.021 -7.811 -8.091 -8.486 -4.130 -3.954 -3.975 -0.253 -2.930 -4.545 1.397 -3.622 -3.981 0.010 -4.357 -1.855 3.299 -4.284 -0.608 -2.811 ML 148 146 6 151 6 1 1 26 45 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 149 146 6 151 6 1 1 26 45 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 150 146 6 151 6 0 0 24 43 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 151 151 5 151 6 1 1 27 46 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 152 152 6 152 5 1 1 27 46 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 30 ] 26 37 C G - - MP 153 152 6 157 6 2 2 26 44 -9.095 -9.034 -0.021 -7.811 -8.091 -8.486 -4.493 -4.393 -4.192 -0.631 -2.922 -4.611 3.533 -3.727 -4.239 -0.382 -4.506 -2.340 0.598 -4.565 -0.628 -3.081 ML 154 152 6 157 6 1 1 24 43 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 155 152 6 157 6 1 1 24 43 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 156 152 6 157 6 0 0 22 41 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 157 157 5 157 6 1 1 25 44 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 158 158 6 158 5 1 1 25 44 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 31 ] 27 36 a u - - MP 159 158 6 163 6 2 2 24 42 -9.095 -9.034 -0.021 -7.811 -8.091 -8.486 -3.349 -2.427 -3.444 2.885 -3.955 -4.731 0.271 -3.622 -3.339 1.567 -3.889 1.084 0.004 -3.859 -1.623 -2.302 ML 160 158 6 163 6 1 1 22 41 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 161 158 6 163 6 1 1 22 41 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 162 158 6 163 6 0 0 20 39 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 163 163 5 163 6 1 1 23 42 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 164 164 6 164 5 1 1 23 42 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 32 ] 28 35 U A - - MP 165 164 6 169 6 2 2 22 40 -9.095 -9.034 -0.021 -7.811 -8.091 -8.486 -4.130 -3.954 -3.975 -0.253 -2.930 -4.545 1.397 -3.622 -3.981 0.010 -4.357 -1.855 3.299 -4.284 -0.608 -2.811 ML 166 164 6 169 6 1 1 21 40 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 167 164 6 169 6 1 1 21 40 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 168 164 6 169 6 0 0 19 38 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 169 169 5 169 6 1 1 22 40 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 170 170 6 170 5 1 1 21 40 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 33 ] 29 34 A U - - MP 171 170 6 175 4 2 2 20 38 -6.915 -7.122 -0.054 -5.536 -3.744 -2.788 -3.766 3.300 -4.081 -5.139 0.216 -3.812 -3.660 1.129 -4.205 -0.272 -0.202 -4.335 -1.725 -2.603 ML 172 170 6 175 4 1 1 21 39 -3.758 -3.940 -0.507 -2.670 0.368 -0.385 -0.191 0.094 MR 173 170 6 175 4 1 1 20 39 -4.809 -3.838 -1.706 -0.766 0.368 -0.385 -0.191 0.094 D 174 170 6 175 4 0 0 19 38 -4.568 -4.250 -2.265 -0.520 IL 175 175 5 175 4 1 1 22 41 -1.686 -2.369 -1.117 -4.855 0.000 0.000 0.000 0.000 IR 176 176 6 176 3 1 1 21 40 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 34 ] 30 - U - - - ML 177 176 6 179 3 1 1 16 35 -7.934 -0.021 -6.588 -0.127 -0.875 -1.272 1.088 D 178 176 6 179 3 0 0 16 34 -6.174 -1.687 -0.566 IL 179 179 3 179 3 1 1 20 38 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 35 ] 31 - A - - - ML 180 179 3 182 3 1 1 15 33 -7.934 -0.021 -6.588 1.705 -2.311 -1.949 -1.847 D 181 179 3 182 3 0 0 15 33 -6.174 -1.687 -0.566 IL 182 182 3 182 3 1 1 19 37 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 36 ] 32 - U - - - ML 183 182 3 185 3 1 1 13 31 -7.934 -0.021 -6.588 -0.808 -0.270 -1.551 1.175 D 184 182 3 185 3 0 0 13 32 -6.174 -1.687 -0.566 IL 185 185 3 185 3 1 1 18 36 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 37 ] 33 - U - - - ML 186 185 3 188 2 1 1 1 1 * 0.000 -0.808 -0.270 -1.551 1.175 D 187 185 3 188 2 0 0 0 0 * 0.000 IL 188 188 3 188 2 1 1 13 28 -1.823 -0.479 0.000 0.000 0.000 0.000 [ END 38 ] - - - - - - E 189 188 3 -1 0 0 0 0 0 // HMMER3/f [3.4 | Aug 2023] NAME mir-753 ACC RF04089 DESC mir-753 microRNA precursor family LENG 62 MAXL 145 ALPH RNA RF no MM no CONS yes CS yes MAP yes DATE Mon Jul 8 09:50:03 2024 COM [1] /hps/software/users/agb/rfam/bin/cmbuild -F CM SEED COM [2] /hps/software/users/agb/rfam/bin/cmcalibrate --cpu 8 /nfs/production/agb/rfam/15/rescan/families/RF04089/CM NSEQ 5 EFFN 2.924805 CKSUM 2040845606 STATS LOCAL MSV -8.4054 0.71937 STATS LOCAL VITERBI -8.4407 0.71937 STATS LOCAL FORWARD -3.8988 0.71937 HMM A C G U m->m m->i m->d i->m i->i d->m d->d COMPO 1.30093 1.71146 1.60725 1.05935 1.38629 1.38629 1.38629 1.38629 0.31868 3.95555 1.37143 1.46634 0.26236 0.00000 * 1 2.32192 2.33614 2.82533 0.29313 1 U - - : 1.38629 1.38629 1.38629 1.38629 0.05133 3.68820 3.68820 1.46634 0.26236 2.72469 0.06781 2 0.49943 2.40350 1.57687 2.34236 2 A - - < 1.38629 1.38629 1.38629 1.38629 0.05133 3.68820 3.68820 1.46634 0.26236 2.72469 0.06781 3 2.62347 1.66960 2.34709 0.44087 3 U - - < 1.38629 1.38629 1.38629 1.38629 0.05133 3.68820 3.68820 1.46634 0.26236 2.72469 0.06781 4 2.62911 1.66963 2.34920 0.43991 4 U - - < 1.38629 1.38629 1.38629 1.38629 0.05133 3.68820 3.68820 1.46634 0.26236 0.79399 0.60155 5 2.93122 1.88901 2.69135 0.31793 5 U - - < 1.38629 1.38629 1.38629 1.38629 0.04458 3.82575 3.82575 1.46634 0.26236 0.24046 1.54302 6 1.46491 1.57384 2.29577 0.77442 6 u - - - 1.38629 1.38629 1.38629 1.38629 0.03905 3.95555 3.95555 1.46634 0.26236 1.09861 0.40547 7 0.24997 3.09406 2.06781 3.00790 7 A - - < 1.38629 1.38629 1.38629 1.38629 0.03905 3.95555 3.95555 1.46634 0.26236 1.09861 0.40547 8 0.68901 2.57116 1.17496 2.18347 8 A - - - 1.38629 1.38629 1.38629 1.38629 0.03905 3.95555 3.95555 1.46634 0.26236 1.09861 0.40547 9 1.03114 3.01244 0.62778 2.80591 9 G - - < 1.38629 1.38629 1.38629 1.38629 0.03905 3.95555 3.95555 1.46634 0.26236 1.09861 0.40547 10 2.75690 3.50410 0.13416 3.44230 10 G - - < 1.38629 1.38629 1.38629 1.38629 0.03905 3.95555 3.95555 1.46634 0.26236 1.09861 0.40547 11 3.47084 0.18259 3.27625 2.32245 11 C - - < 1.38629 1.38629 1.38629 1.38629 0.03905 3.95555 3.95555 1.46634 0.26236 1.09861 0.40547 12 3.28096 2.13964 3.06345 0.22567 12 U - - < 1.38629 1.38629 1.38629 1.38629 0.03905 3.95555 3.95555 1.46634 0.26236 1.09861 0.40547 13 3.27975 2.13954 3.06286 0.22577 13 U - - < 1.38629 1.38629 1.38629 1.38629 0.03905 3.95555 3.95555 1.46634 0.26236 1.09861 0.40547 14 2.75479 3.50132 0.13455 3.43851 14 G - - < 1.38629 1.38629 1.38629 1.38629 0.03905 3.95555 3.95555 1.46634 0.26236 1.09861 0.40547 15 1.00721 3.00233 0.64619 2.79599 15 G - - < 1.38629 1.38629 1.38629 1.38629 0.03905 3.95555 3.95555 1.46634 0.26236 1.09861 0.40547 16 0.24867 3.10126 2.06944 3.01774 16 A - - < 1.38629 1.38629 1.38629 1.38629 0.03905 3.95555 3.95555 1.46634 0.26236 1.09861 0.40547 17 2.72228 1.62773 2.50160 0.42168 17 U - - < 1.38629 1.38629 1.38629 1.38629 0.03905 3.95555 3.95555 1.46634 0.26236 1.09861 0.40547 18 2.85929 2.78153 3.38555 0.16619 18 U - - - 1.38629 1.38629 1.38629 1.38629 0.03905 3.95555 3.95555 1.46634 0.26236 1.09861 0.40547 19 2.04419 3.16214 0.24986 3.01044 19 G - - < 1.38629 1.38629 1.38629 1.38629 0.03905 3.95555 3.95555 1.46634 0.26236 1.09861 0.40547 20 3.28214 2.13974 3.06402 0.22556 20 U - - < 1.38629 1.38629 1.38629 1.38629 0.03905 3.95555 3.95555 1.46634 0.26236 1.09861 0.40547 21 2.75650 3.50357 0.13424 3.44158 21 G - - < 1.38629 1.38629 1.38629 1.38629 0.03905 3.95555 3.95555 1.46634 0.26236 1.09861 0.40547 22 0.24835 3.10302 2.06983 3.02014 22 A - - < 1.38629 1.38629 1.38629 1.38629 0.03905 3.95555 3.95555 1.46634 0.26236 1.09861 0.40547 23 3.27964 2.13953 3.06281 0.22578 23 U - - < 1.38629 1.38629 1.38629 1.38629 0.03905 3.95555 3.95555 1.46634 0.26236 1.09861 0.40547 24 3.46650 0.18295 3.27402 2.32165 24 C - - < 1.38629 1.38629 1.38629 1.38629 0.03905 3.95555 3.95555 1.46634 0.26236 1.09861 0.40547 25 3.27752 2.13936 3.06178 0.22597 25 U - - < 1.38629 1.38629 1.38629 1.38629 0.03905 3.95555 3.95555 1.46634 0.26236 1.09861 0.40547 26 3.46421 0.18314 3.27285 2.32123 26 C - - < 1.38629 1.38629 1.38629 1.38629 0.03905 3.95555 3.95555 1.46634 0.26236 1.09861 0.40547 27 0.53672 2.93890 1.21072 2.74218 27 A - - < 1.38629 1.38629 1.38629 1.38629 0.03905 3.95555 3.95555 1.46634 0.26236 1.09861 0.40547 28 3.27533 2.13917 3.06071 0.22616 28 U - - < 1.38629 1.38629 1.38629 1.38629 0.03905 3.95555 3.95555 1.46634 0.26236 1.09861 0.40547 29 0.24881 3.10045 2.06925 3.01662 29 A - - < 1.38629 1.38629 1.38629 1.38629 0.03905 3.95555 3.95555 1.46634 0.26236 1.09861 0.40547 30 1.54773 2.17886 2.47993 0.52704 30 U - - _ 1.38629 1.38629 1.38629 1.38629 0.03905 3.95555 3.95555 1.46634 0.26236 1.09861 0.40547 31 0.11685 3.50205 3.20114 3.23332 31 A - - _ 1.38629 1.38629 1.38629 1.38629 0.03905 3.95555 3.95555 1.46634 0.26236 1.09861 0.40547 32 2.20702 1.60378 2.73511 0.47169 32 U - - _ 1.38629 1.38629 1.38629 1.38629 0.03905 3.95555 3.95555 1.46634 0.26236 1.09861 0.40547 33 2.20702 1.60378 2.73511 0.47169 33 U - - _ 1.38629 1.38629 1.38629 1.38629 0.03905 3.95555 3.95555 1.46634 0.26236 1.09861 0.40547 34 3.23593 2.39367 2.90908 0.20474 34 U - - > 1.38629 1.38629 1.38629 1.38629 0.03905 3.95555 3.95555 1.46634 0.26236 1.09861 0.40547 35 0.25644 3.24904 1.97565 3.02183 35 A - - > 1.38629 1.38629 1.38629 1.38629 0.03905 3.95555 3.95555 1.46634 0.26236 1.09861 0.40547 36 2.95122 1.91489 2.73391 0.30734 36 U - - > 1.38629 1.38629 1.38629 1.38629 0.03905 3.95555 3.95555 1.46634 0.26236 1.09861 0.40547 37 2.59993 3.43925 0.15783 3.22799 37 G - - > 1.38629 1.38629 1.38629 1.38629 0.03905 3.95555 3.95555 1.46634 0.26236 1.09861 0.40547 38 0.25621 3.25054 1.97587 3.02354 38 A - - > 1.38629 1.38629 1.38629 1.38629 0.03905 3.95555 3.95555 1.46634 0.26236 1.09861 0.40547 39 2.60110 3.44099 0.15757 3.22999 39 G - - > 1.38629 1.38629 1.38629 1.38629 0.03905 3.95555 3.95555 1.46634 0.26236 1.09861 0.40547 40 0.25596 3.25228 1.97612 3.02552 40 A - - > 1.38629 1.38629 1.38629 1.38629 0.03905 3.95555 3.95555 1.46634 0.26236 1.09861 0.40547 41 3.24479 2.39502 2.91277 0.20392 41 U - - > 1.38629 1.38629 1.38629 1.38629 0.03905 3.95555 3.95555 1.46634 0.26236 1.09861 0.40547 42 3.63776 0.15976 3.34703 2.45167 42 C - - > 1.38629 1.38629 1.38629 1.38629 0.03905 3.95555 3.95555 1.46634 0.26236 1.09861 0.40547 43 0.25519 3.25749 1.97689 3.03145 43 A - - > 1.38629 1.38629 1.38629 1.38629 0.03905 3.95555 3.95555 1.46634 0.26236 1.09861 0.40547 44 3.22921 2.12588 2.96171 0.23654 44 U - - > 1.38629 1.38629 1.38629 1.38629 0.03905 3.95555 3.95555 1.46634 0.26236 1.09861 0.40547 45 2.85929 2.78153 3.38555 0.16619 45 U - - - 1.38629 1.38629 1.38629 1.38629 0.03905 3.95555 3.95555 1.46634 0.26236 1.09861 0.40547 46 0.63138 2.66776 1.15213 2.49163 46 A - - > 1.38629 1.38629 1.38629 1.38629 0.03905 3.95555 3.95555 1.46634 0.26236 1.09861 0.40547 47 3.23822 2.39402 2.91003 0.20453 47 U - - > 1.38629 1.38629 1.38629 1.38629 0.03905 3.95555 3.95555 1.46634 0.26236 1.09861 0.40547 48 3.00224 1.90764 2.79457 0.30009 48 U - - > 1.38629 1.38629 1.38629 1.38629 0.03905 3.95555 3.95555 1.46634 0.26236 1.09861 0.40547 49 3.62685 0.16051 3.34196 2.44963 49 C - - > 1.38629 1.38629 1.38629 1.38629 0.03905 3.95555 3.95555 1.46634 0.26236 1.09861 0.40547 50 0.25595 3.25234 1.97613 3.02558 50 A - - > 1.38629 1.38629 1.38629 1.38629 0.03905 3.95555 3.95555 1.46634 0.26236 1.09861 0.40547 51 0.25576 3.25361 1.97632 3.02703 51 A - - > 1.38629 1.38629 1.38629 1.38629 0.03905 3.95555 3.95555 1.46634 0.26236 1.09861 0.40547 52 2.60448 3.44602 0.15682 3.23580 52 G - - > 1.38629 1.38629 1.38629 1.38629 0.03905 3.95555 3.95555 1.46634 0.26236 1.09861 0.40547 53 3.64455 0.15929 3.35018 2.45293 53 C - - > 1.38629 1.38629 1.38629 1.38629 0.03905 3.95555 3.95555 1.46634 0.26236 1.09861 0.40547 54 3.02442 1.91359 2.80981 0.29619 54 U - - > 1.38629 1.38629 1.38629 1.38629 0.03905 3.95555 3.95555 1.46634 0.26236 1.09861 0.40547 55 3.16399 0.14730 3.73695 2.64674 55 C - - - 1.38629 1.38629 1.38629 1.38629 0.03905 3.95555 3.95555 1.46634 0.26236 1.09861 0.40547 56 3.21717 2.39079 2.90118 0.20651 56 U - - > 1.38629 1.38629 1.38629 1.38629 0.16389 2.02485 3.95555 0.26847 1.44625 1.09861 0.40547 57 2.85929 2.78153 3.38555 0.16619 58 U - - - 1.38629 1.38629 1.38629 1.38629 0.03905 3.95555 3.95555 1.46634 0.26236 1.09861 0.40547 58 0.41003 2.44472 1.75852 2.55976 59 A - - > 1.38629 1.38629 1.38629 1.38629 0.03905 3.95555 3.95555 1.46634 0.26236 1.09861 0.40547 59 0.46744 2.55564 1.58666 2.39529 60 A - - > 1.38629 1.38629 1.38629 1.38629 0.03905 3.95555 3.95555 1.46634 0.26236 1.09861 0.40547 60 0.46337 2.55674 1.60066 2.39121 61 A - - > 1.38629 1.38629 1.38629 1.38629 0.03905 3.95555 3.95555 1.46634 0.26236 1.09861 0.40547 61 2.49072 1.88142 2.28553 0.41090 62 U - - > 1.38629 1.38629 1.38629 1.38629 0.16389 3.95555 2.02485 1.46634 0.26236 1.09861 0.40547 62 0.15386 3.24575 2.96919 2.95028 63 A - - : 1.38629 1.38629 1.38629 1.38629 0.02231 3.81398 * 1.46634 0.26236 0.00000 * //