INFERNAL1/a [1.1.5 | Sep 2023] NAME mir-1271 ACC RF04085 DESC mir-1271 microRNA precursor family STATES 235 NODES 50 CLEN 77 W 108 ALPH RNA RF no CONS yes MAP yes DATE Wed Jul 10 05:13:47 2024 COM [1] /hps/software/users/agb/rfam/bin/cmbuild -F CM SEED COM [2] /hps/software/users/agb/rfam/bin/cmcalibrate --cpu 8 /nfs/production/agb/rfam/15/rescan/families/RF04085/CM PBEGIN 0.05 PEND 0.05 WBETA 1e-07 QDBBETA1 1e-07 QDBBETA2 1e-15 N2OMEGA 1.52588e-05 N3OMEGA 1.52588e-05 ELSELF -0.08926734 NSEQ 13 EFFN 1.469482 CKSUM 2458863024 NULL 0.000 0.000 0.000 0.000 GA 80.50 TC 80.60 NC 80.40 EFP7GF -8.2378 0.71911 ECMLC 0.71630 -4.21352 3.35437 1600000 271302 0.004423 ECMGC 0.42912 -15.17742 -1.95772 1600000 116343 0.003438 ECMLI 0.68648 -2.81573 4.63023 1600000 199104 0.006027 ECMGI 0.51187 -8.66870 1.59089 1600000 76345 0.005239 CM [ ROOT 0 ] - - - - - - S 0 -1 0 1 4 1 1 108 153 -6.746 -6.953 -0.159 -3.519 IL 1 1 2 1 4 1 16 110 155 -1.686 -2.369 -1.117 -4.855 0.000 0.000 0.000 0.000 IR 2 2 3 2 3 1 16 110 155 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 1 ] 1 - c - - - ML 3 2 3 5 3 1 16 108 153 -8.102 -0.070 -4.515 -0.561 0.731 -1.330 0.339 D 4 2 3 5 3 0 10 106 151 -5.983 -1.097 -0.953 IL 5 5 3 5 3 1 15 109 153 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 2 ] - 86 - A - - MR 6 5 3 8 3 1 15 107 152 -8.055 -0.023 -6.372 1.536 -1.735 -1.430 -1.221 D 7 5 3 8 3 0 8 105 150 -7.086 -2.264 -0.350 IR 8 8 3 8 3 1 15 108 152 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 3 ] - 85 - g - - MR 9 8 3 11 5 1 15 106 151 -6.815 -0.047 -6.631 -6.843 -7.735 0.119 -1.323 0.930 -0.715 D 10 8 3 11 5 0 7 104 149 -5.783 -0.868 -3.409 -4.840 -1.713 IR 11 11 3 11 5 1 13 106 151 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 4 ] 2 84 a u - - MP 12 11 3 16 6 2 14 105 150 -9.002 -8.941 -0.023 -7.717 -7.997 -8.392 -3.386 -2.529 -3.428 2.979 -3.568 -4.603 0.710 -3.491 -3.342 1.523 -3.868 -0.080 0.288 -3.856 -1.235 -2.291 ML 13 11 3 16 6 1 10 104 149 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 14 11 3 16 6 1 8 103 148 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 15 11 3 16 6 0 5 101 146 -9.486 -8.184 -3.981 -4.664 -4.681 -0.229 IL 16 16 5 16 6 1 11 105 149 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 17 17 6 17 5 1 11 104 149 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 5 ] 3 83 G C - - MP 18 17 6 22 4 2 12 103 148 -6.652 -6.859 -0.066 -5.273 -3.706 -2.553 -3.758 0.926 -4.175 -4.324 0.273 -4.046 -3.646 3.214 -4.068 0.555 -0.035 -3.750 -1.699 -2.666 ML 19 17 6 22 4 1 9 102 147 -3.758 -3.940 -0.507 -2.670 0.368 -0.385 -0.191 0.094 MR 20 17 6 22 4 1 6 102 146 -4.809 -3.838 -1.706 -0.766 0.368 -0.385 -0.191 0.094 D 21 17 6 22 4 0 4 100 145 -4.981 -4.662 -2.678 -0.372 IL 22 22 5 22 4 1 11 103 148 -1.686 -2.369 -1.117 -4.855 0.000 0.000 0.000 0.000 IR 23 23 6 23 3 1 10 103 148 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 6 ] 4 - A - - - ML 24 23 6 26 3 1 11 101 146 -7.692 -0.025 -6.346 1.105 -1.243 -0.313 -0.684 D 25 23 6 26 3 0 4 99 144 -6.730 -2.243 -0.360 IL 26 26 3 26 3 1 10 102 147 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 7 ] 5 - u - - - ML 27 26 3 29 3 1 10 100 145 -8.102 -0.022 -6.419 -0.037 -0.723 -1.078 0.960 D 28 26 3 29 3 0 3 98 143 -5.983 -1.097 -0.953 IL 29 29 3 29 3 1 9 101 145 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 8 ] - 82 - g - - MR 30 29 3 32 3 1 10 99 144 -8.102 -0.022 -6.419 -0.376 -1.134 0.917 -0.175 D 31 29 3 32 3 0 2 97 142 -6.871 -2.049 -0.415 IR 32 32 3 32 3 1 8 100 144 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 9 ] - 81 - U - - MR 33 32 3 35 5 1 9 98 143 -6.859 -0.046 -6.674 -6.886 -7.778 -1.002 -1.088 -1.705 1.445 D 34 32 3 35 5 0 2 96 141 -5.641 -0.996 -3.268 -4.699 -1.572 IR 35 35 3 35 5 1 7 98 143 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 10 ] 6 80 C G - - MP 36 35 3 40 6 2 9 97 142 -9.002 -8.941 -0.023 -7.717 -7.997 -8.392 -4.021 -3.871 -3.795 -0.160 -2.642 -4.274 3.345 -3.397 -3.831 0.175 -4.144 -1.813 0.918 -4.121 -0.341 -2.691 ML 37 35 3 40 6 1 5 96 140 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 38 35 3 40 6 1 4 95 140 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 39 35 3 40 6 0 1 92 137 -9.486 -8.184 -3.981 -4.664 -4.681 -0.229 IL 40 40 5 40 6 1 6 97 141 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 41 41 6 41 5 1 6 96 141 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 11 ] 7 79 a u - - MP 42 41 6 46 6 2 8 95 140 -9.002 -8.941 -0.023 -7.717 -7.997 -8.392 -3.386 -2.529 -3.428 2.979 -3.568 -4.603 0.710 -3.491 -3.342 1.523 -3.868 -0.080 0.288 -3.856 -1.235 -2.291 ML 43 41 6 46 6 1 4 94 139 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 44 41 6 46 6 1 3 93 138 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 45 41 6 46 6 0 0 91 136 -9.486 -8.184 -3.981 -4.664 -4.681 -0.229 IL 46 46 5 46 6 1 5 95 139 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 47 47 6 47 5 1 5 94 139 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 12 ] 8 78 g c - - MP 48 47 6 52 4 2 6 93 138 -6.652 -6.859 -0.066 -5.273 -3.279 -2.250 -3.388 1.256 -3.830 -4.375 0.497 -3.566 -3.245 2.430 -3.731 2.075 0.192 -3.655 -1.438 -2.236 ML 49 47 6 52 4 1 3 92 137 -3.758 -3.940 -0.507 -2.670 0.368 -0.385 -0.191 0.094 MR 50 47 6 52 4 1 2 92 137 -4.809 -3.838 -1.706 -0.766 0.368 -0.385 -0.191 0.094 D 51 47 6 52 4 0 0 90 135 -4.981 -4.662 -2.678 -0.372 IL 52 52 5 52 4 1 5 93 138 -1.686 -2.369 -1.117 -4.855 0.000 0.000 0.000 0.000 IR 53 53 6 53 3 1 4 93 138 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 13 ] 9 - U - - - ML 54 53 6 56 3 1 4 91 136 -8.102 -0.022 -6.419 -0.583 -0.228 -1.309 1.053 D 55 53 6 56 3 0 0 90 135 -5.983 -0.804 -1.281 IL 56 56 3 56 3 1 3 92 136 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 14 ] - 77 - A - - MR 57 56 3 59 5 1 4 90 135 -6.894 -0.081 -6.709 -4.951 -7.813 1.073 -0.562 -1.015 -0.466 D 58 56 3 59 5 0 0 88 133 -5.512 -0.867 -3.138 -2.766 -2.564 IR 59 59 3 59 5 1 2 90 135 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 15 ] 10 76 G C - - MP 60 59 3 64 6 2 6 89 134 -9.002 -8.941 -0.023 -7.717 -7.997 -8.392 -4.215 -2.847 -4.281 0.538 -4.491 -4.476 0.019 -4.475 -3.963 3.481 -4.341 -0.533 -0.384 -4.117 -1.993 -3.166 ML 61 59 3 64 6 1 1 87 132 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 62 59 3 64 6 1 1 87 132 -7.300 -6.029 -1.134 -6.007 -1.141 -4.221 0.011 0.356 -0.683 0.124 D 63 59 3 64 6 0 0 84 128 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 64 64 5 64 6 1 2 89 133 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 65 65 6 65 5 1 2 88 133 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 16 ] 11 75 C G - - MP 66 65 6 70 6 2 5 87 132 -9.034 -8.973 -0.022 -7.749 -8.029 -8.424 -3.622 -3.560 -3.473 0.130 -2.397 -4.006 3.009 -3.121 -3.499 0.401 -3.865 -1.584 1.224 -3.745 0.864 -2.377 ML 67 65 6 70 6 1 1 85 130 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 68 65 6 70 6 1 1 85 130 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 69 65 6 70 6 0 0 82 126 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 70 70 5 70 6 1 1 87 131 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 71 71 6 71 5 1 2 86 131 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 17 ] 12 74 u g - - MP 72 71 6 76 6 2 5 85 130 -9.034 -6.114 -0.041 -7.749 -8.029 -8.424 -3.722 -3.626 -3.507 0.002 -2.388 -3.995 1.888 -3.122 -3.544 0.261 -3.876 -1.638 1.095 -3.841 2.727 -2.435 ML 73 71 6 76 6 1 1 83 128 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 74 71 6 76 6 1 1 83 128 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 75 71 6 76 6 0 0 80 125 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 76 76 5 76 6 1 1 85 129 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 77 77 6 77 5 1 1 84 129 -2.507 -0.458 -6.018 -4.186 -5.291 0.000 0.000 0.000 0.000 [ MATP 18 ] 13 72 u a - - MP 78 77 6 82 6 2 5 83 128 -9.034 -8.973 -0.022 -7.749 -8.029 -8.424 -3.619 -3.528 -3.529 0.128 -2.582 -4.129 1.725 -3.259 -3.553 0.437 -3.957 -1.539 2.966 -3.772 0.130 -2.428 ML 79 77 6 82 6 1 1 81 126 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 80 77 6 82 6 1 1 81 126 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 81 77 6 82 6 0 0 78 123 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 82 82 5 82 6 1 1 83 127 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 83 83 6 83 5 1 1 82 127 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 19 ] 14 71 G C - - MP 84 83 6 88 6 2 4 81 126 -9.034 -8.973 -0.022 -7.749 -8.029 -8.424 -4.381 -2.924 -4.454 0.434 -4.725 -4.548 -0.177 -4.666 -4.082 3.538 -4.447 -0.613 -0.573 -4.229 -2.196 -3.337 ML 85 83 6 88 6 1 1 79 124 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 86 83 6 88 6 1 1 79 124 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 87 83 6 88 6 0 0 76 121 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 88 88 5 88 6 1 1 81 125 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 89 89 6 89 5 1 1 80 125 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 20 ] 15 70 G C - - MP 90 89 6 94 6 2 4 79 124 -9.034 -8.973 -0.022 -7.749 -8.029 -8.424 -4.381 -2.924 -4.454 0.434 -4.725 -4.548 -0.177 -4.666 -4.082 3.538 -4.447 -0.613 -0.573 -4.229 -2.196 -3.337 ML 91 89 6 94 6 1 1 77 122 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 92 89 6 94 6 1 1 77 122 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 93 89 6 94 6 0 0 74 119 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 94 94 5 94 6 1 1 79 124 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 95 95 6 95 5 1 1 78 123 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 21 ] 16 69 C G - - MP 96 95 6 100 6 2 4 77 122 -9.034 -8.973 -0.022 -7.749 -8.029 -8.424 -4.180 -4.050 -3.930 -0.320 -2.735 -4.389 3.418 -3.507 -3.969 -0.018 -4.267 -1.994 0.813 -4.272 -0.435 -2.823 ML 97 95 6 100 6 1 1 76 120 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 98 95 6 100 6 1 1 75 120 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 99 95 6 100 6 0 0 73 117 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 100 100 5 100 6 1 1 77 122 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 101 101 6 101 5 1 1 76 121 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 22 ] 17 68 A U - - MP 102 101 6 106 6 2 3 75 120 -9.034 -8.973 -0.022 -7.749 -8.029 -8.424 -3.501 -2.611 -3.537 3.102 -3.734 -4.775 0.548 -3.596 -3.444 1.394 -3.977 -0.139 0.129 -4.009 -1.395 -2.391 ML 103 101 6 106 6 1 1 74 119 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 104 101 6 106 6 1 1 74 118 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 105 101 6 106 6 0 0 71 116 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 106 106 5 106 6 1 1 75 120 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 107 107 6 107 5 1 1 75 119 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 23 ] 18 67 C G - - MP 108 107 6 112 4 2 2 73 118 -6.746 -6.953 -0.061 -5.367 -4.180 -4.050 -3.930 -0.320 -2.735 -4.389 3.418 -3.507 -3.969 -0.018 -4.267 -1.994 0.813 -4.272 -0.435 -2.823 ML 109 107 6 112 4 1 1 73 117 -3.758 -3.940 -0.507 -2.670 0.368 -0.385 -0.191 0.094 MR 110 107 6 112 4 1 1 72 117 -4.809 -3.838 -1.706 -0.766 0.368 -0.385 -0.191 0.094 D 111 107 6 112 4 0 0 71 116 -4.568 -4.250 -2.265 -0.520 IL 112 112 5 112 4 1 1 74 118 -1.686 -2.369 -1.117 -4.855 0.000 0.000 0.000 0.000 IR 113 113 6 113 3 1 1 73 118 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 24 ] 19 - c - - - ML 114 113 6 116 3 1 1 71 116 -8.181 -0.021 -6.499 -0.123 0.877 -1.277 -0.264 D 115 113 6 116 3 0 0 70 115 -5.620 -0.734 -1.403 IL 116 116 3 116 3 1 1 72 117 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 25 ] - 66 - U - - MR 117 116 3 119 5 1 1 70 115 -6.932 -0.044 -6.747 -6.960 -7.851 -1.150 -1.207 -1.864 1.507 D 118 116 3 119 5 0 0 69 114 -5.352 -0.707 -2.978 -4.409 -2.404 IR 119 119 3 119 5 1 1 70 115 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 26 ] 20 65 u a - - MP 120 119 3 124 6 2 2 69 114 -9.034 -8.973 -0.022 -7.749 -8.029 -8.424 -3.271 -3.223 -3.228 0.383 -2.368 -3.868 1.905 -3.018 -3.252 0.652 -3.682 -1.290 2.461 -3.453 1.180 -2.174 ML 121 119 3 124 6 1 1 67 112 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 122 119 3 124 6 1 1 67 112 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 123 119 3 124 6 0 0 64 109 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 124 124 5 124 6 1 1 69 114 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 125 125 6 125 5 1 1 68 113 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 27 ] 21 64 a u - - MP 126 125 6 130 6 2 2 67 112 -9.034 -8.973 -0.022 -7.749 -8.029 -8.424 -2.604 -2.157 -2.734 2.139 -2.796 -3.611 1.126 -1.618 -2.750 1.730 -3.259 0.928 0.846 -2.897 -0.674 -1.778 ML 127 125 6 130 6 1 1 66 110 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 128 125 6 130 6 1 1 65 110 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 129 125 6 130 6 0 0 62 107 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 130 130 5 130 6 1 1 67 112 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 131 131 6 131 5 1 1 66 111 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 28 ] 22 63 g c - - MP 132 131 6 136 6 2 2 65 110 -9.034 -8.973 -0.022 -7.749 -8.029 -8.424 -0.727 -2.264 -2.962 1.174 -3.144 -3.725 0.917 -3.287 -3.051 2.817 -3.515 -0.115 0.628 -3.029 -0.919 -2.006 ML 133 131 6 136 6 1 1 64 109 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 134 131 6 136 6 1 1 63 108 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 135 131 6 136 6 0 0 61 105 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 136 136 5 136 6 1 1 65 110 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 137 137 6 137 5 1 1 65 109 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 29 ] 23 62 c g - - MP 138 137 6 142 6 2 2 63 108 -9.034 -8.973 -0.022 -7.749 -8.029 -8.424 -2.832 -2.901 -2.870 0.530 -0.140 -3.572 2.328 -2.794 -2.901 0.648 -3.375 -1.150 1.368 -3.071 1.470 -1.904 ML 139 137 6 142 6 1 1 62 107 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 140 137 6 142 6 1 1 62 106 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 141 137 6 142 6 0 0 59 104 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 142 142 5 142 6 1 1 63 108 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 143 143 6 143 5 1 1 63 107 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 30 ] 24 61 A U - - MP 144 143 6 148 4 2 2 61 106 -6.746 -6.953 -0.061 -5.367 -3.501 -2.611 -3.537 3.102 -3.734 -4.775 0.548 -3.596 -3.444 1.394 -3.977 -0.139 0.129 -4.009 -1.395 -2.391 ML 145 143 6 148 4 1 1 61 105 -3.758 -3.940 -0.507 -2.670 0.368 -0.385 -0.191 0.094 MR 146 143 6 148 4 1 1 60 105 -4.809 -3.838 -1.706 -0.766 0.368 -0.385 -0.191 0.094 D 147 143 6 148 4 0 0 59 104 -4.568 -4.250 -2.265 -0.520 IL 148 148 5 148 4 1 1 62 106 -1.686 -2.369 -1.117 -4.855 0.000 0.000 0.000 0.000 IR 149 149 6 149 3 1 1 61 106 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 31 ] 25 - A - - - ML 150 149 6 152 3 1 1 59 104 -8.181 -0.021 -6.499 1.625 -2.000 -1.669 -1.508 D 151 149 6 152 3 0 0 58 103 -5.620 -0.734 -1.403 IL 152 152 3 152 3 1 1 60 105 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 32 ] - 60 - C - - MR 153 152 3 155 5 1 1 58 103 -6.932 -0.044 -6.747 -6.960 -7.851 -0.752 1.008 -1.543 0.074 D 154 152 3 155 5 0 0 57 102 -5.352 -0.707 -2.978 -4.409 -2.404 IR 155 155 3 155 5 1 1 58 103 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 33 ] 26 59 G C - - MP 156 155 3 160 6 2 2 57 102 -9.034 -8.973 -0.022 -7.749 -8.029 -8.424 -4.381 -2.924 -4.454 0.434 -4.725 -4.548 -0.177 -4.666 -4.082 3.538 -4.447 -0.613 -0.573 -4.229 -2.196 -3.337 ML 157 155 3 160 6 1 1 55 100 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 158 155 3 160 6 1 1 55 100 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 159 155 3 160 6 0 0 52 97 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 160 160 5 160 6 1 1 57 102 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 161 161 6 161 5 1 1 57 101 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 34 ] 27 58 C G - - MP 162 161 6 166 6 2 2 55 100 -9.034 -8.973 -0.022 -7.749 -8.029 -8.424 -3.700 -3.634 -3.535 0.068 -2.434 -4.054 3.093 -3.168 -3.563 0.345 -3.919 -1.649 1.180 -3.815 0.638 -2.435 ML 163 161 6 166 6 1 1 53 98 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 164 161 6 166 6 1 1 53 98 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 165 161 6 166 6 0 0 50 95 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 166 166 5 166 6 1 1 55 100 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 167 167 6 167 5 1 1 55 99 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 35 ] 28 57 a u - - MP 168 167 6 172 6 2 2 53 98 -9.034 -8.973 -0.022 -7.749 -8.029 -8.424 -2.856 -0.167 -2.963 2.547 -3.213 -3.951 0.755 -3.216 -2.962 1.824 -3.483 0.017 0.493 -3.189 -1.045 -1.961 ML 169 167 6 172 6 1 1 51 96 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 170 167 6 172 6 1 1 51 96 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 171 167 6 172 6 0 0 48 93 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 172 172 5 172 6 1 1 53 98 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 173 173 6 173 5 1 1 53 97 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 36 ] 29 56 C G - - MP 174 173 6 178 6 2 2 51 96 -9.034 -8.973 -0.022 -7.749 -8.029 -8.424 -4.180 -4.050 -3.930 -0.320 -2.735 -4.389 3.418 -3.507 -3.969 -0.018 -4.267 -1.994 0.813 -4.272 -0.435 -2.823 ML 175 173 6 178 6 1 1 49 94 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 176 173 6 178 6 1 1 49 94 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 177 173 6 178 6 0 0 46 91 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 178 178 5 178 6 1 1 51 96 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 179 179 6 179 5 1 1 51 95 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 37 ] 30 55 U A - - MP 180 179 6 184 6 2 2 49 94 -9.034 -8.973 -0.022 -7.749 -8.029 -8.424 -3.821 -3.631 -3.698 0.045 -2.724 -4.295 1.594 -3.392 -3.708 0.363 -4.099 -1.541 3.116 -3.985 -0.409 -2.565 ML 181 179 6 184 6 1 1 47 92 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 182 179 6 184 6 1 1 47 92 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 183 179 6 184 6 0 0 44 88 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 184 184 5 184 6 1 1 49 94 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 185 185 6 185 5 1 1 49 93 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 38 ] 31 54 C G - - MP 186 185 6 190 6 2 2 47 92 -9.034 -8.973 -0.022 -7.749 -8.029 -8.424 -4.180 -4.050 -3.930 -0.320 -2.735 -4.389 3.418 -3.507 -3.969 -0.018 -4.267 -1.994 0.813 -4.272 -0.435 -2.823 ML 187 185 6 190 6 1 1 45 90 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 188 185 6 190 6 1 1 45 90 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 189 185 6 190 6 0 0 41 86 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 190 190 5 190 6 1 1 47 92 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 191 191 6 191 5 1 1 47 91 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 39 ] 32 53 A U - - MP 192 191 6 196 6 2 2 45 90 -9.034 -8.973 -0.022 -7.749 -8.029 -8.424 -3.501 -2.611 -3.537 3.102 -3.734 -4.775 0.548 -3.596 -3.444 1.394 -3.977 -0.139 0.129 -4.009 -1.395 -2.391 ML 193 191 6 196 6 1 1 43 88 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 194 191 6 196 6 1 1 43 87 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 195 191 6 196 6 0 0 39 84 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 196 196 5 196 6 1 1 45 90 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 197 197 6 197 5 1 1 45 89 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 40 ] 33 52 g u - - MP 198 197 6 202 6 2 2 44 88 -4.909 -8.973 -0.069 -7.749 -8.029 -8.424 -2.695 -1.957 -2.886 1.620 -3.080 -3.677 0.886 -3.082 -1.272 1.789 -3.217 1.924 0.604 -3.050 -0.920 -1.852 ML 199 197 6 202 6 1 1 40 85 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 200 197 6 202 6 1 1 39 84 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 201 197 6 202 6 0 0 35 79 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 202 202 5 202 6 1 1 50 95 -0.593 -4.583 -1.920 -6.238 -7.014 -6.674 0.000 0.000 0.000 0.000 IR 203 203 6 203 5 1 1 25 44 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 41 ] 42 51 u g - - MP 204 203 6 208 6 2 2 24 43 -9.034 -8.973 -0.022 -7.749 -8.029 -8.424 -3.441 -3.402 -3.323 0.195 -2.338 -3.881 1.926 -3.037 -3.361 0.464 -3.742 -1.487 1.700 -3.588 2.303 -2.273 ML 205 203 6 208 6 1 1 23 42 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 206 203 6 208 6 1 1 23 42 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 207 203 6 208 6 0 0 22 41 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 208 208 5 208 6 1 1 24 43 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 209 209 6 209 5 1 1 24 42 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 42 ] 43 50 a u - - MP 210 209 6 214 4 2 2 22 41 -6.746 -6.953 -0.061 -5.367 -3.200 -2.334 -3.292 2.739 -3.689 -4.489 0.531 -3.469 -3.209 1.719 -3.750 0.933 0.245 -3.654 -1.371 -2.171 ML 211 209 6 214 4 1 1 23 42 -3.758 -3.940 -0.507 -2.670 0.368 -0.385 -0.191 0.094 MR 212 209 6 214 4 1 1 22 41 -4.809 -3.838 -1.706 -0.766 0.368 -0.385 -0.191 0.094 D 213 209 6 214 4 0 0 21 40 -4.568 -4.250 -2.265 -0.520 IL 214 214 5 214 4 1 1 24 43 -1.686 -2.369 -1.117 -4.855 0.000 0.000 0.000 0.000 IR 215 215 6 215 3 1 1 23 42 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 43 ] 44 - A - - - ML 216 215 6 218 3 1 1 19 38 -7.778 -0.023 -6.432 1.087 -1.039 -1.057 -0.138 D 217 215 6 218 3 0 0 18 37 -6.174 -1.687 -0.566 IL 218 218 3 218 3 1 1 22 41 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 44 ] 45 - A - - - ML 219 218 3 221 3 1 1 18 36 -7.778 -0.023 -6.432 1.126 -1.076 -1.078 -0.202 D 220 218 3 221 3 0 0 17 36 -6.174 -1.687 -0.566 IL 221 221 3 221 3 1 1 21 40 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 45 ] 46 - U - - - ML 222 221 3 224 3 1 1 16 35 -7.778 -0.023 -6.432 -0.684 -0.314 -1.414 1.136 D 223 221 3 224 3 0 0 16 34 -6.174 -1.687 -0.566 IL 224 224 3 224 3 1 1 20 38 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 46 ] 47 - A - - - ML 225 224 3 227 3 1 1 15 33 -7.778 -0.023 -6.432 1.625 -2.000 -1.669 -1.508 D 226 224 3 227 3 0 0 15 33 -6.174 -1.687 -0.566 IL 227 227 3 227 3 1 1 19 37 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 47 ] 48 - c - - - ML 228 227 3 230 3 1 1 13 32 -7.778 -0.023 -6.432 -0.324 0.547 -0.597 0.110 D 229 227 3 230 3 0 0 13 32 -6.174 -1.687 -0.566 IL 230 230 3 230 3 1 1 18 36 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 48 ] 49 - U - - - ML 231 230 3 233 2 1 1 1 1 * 0.000 -0.851 -0.715 -1.572 1.322 D 232 230 3 233 2 0 0 0 0 * 0.000 IL 233 233 3 233 2 1 1 13 28 -1.823 -0.479 0.000 0.000 0.000 0.000 [ END 49 ] - - - - - - E 234 233 3 -1 0 0 0 0 0 // HMMER3/f [3.4 | Aug 2023] NAME mir-1271 ACC RF04085 DESC mir-1271 microRNA precursor family LENG 77 MAXL 188 ALPH RNA RF no MM no CONS yes CS yes MAP yes DATE Wed Jul 10 05:13:47 2024 COM [1] /hps/software/users/agb/rfam/bin/cmbuild -F CM SEED COM [2] /hps/software/users/agb/rfam/bin/cmcalibrate --cpu 8 /nfs/production/agb/rfam/15/rescan/families/RF04085/CM NSEQ 13 EFFN 2.599365 CKSUM 2458863024 STATS LOCAL MSV -8.7563 0.71911 STATS LOCAL VITERBI -9.2596 0.71911 STATS LOCAL FORWARD -3.5545 0.71911 HMM A C G U m->m m->i m->d i->m i->i d->m d->d COMPO 1.47004 1.43587 1.32514 1.32272 1.38629 1.38629 1.38629 1.38629 0.12028 3.90104 2.37399 1.46634 0.26236 0.00000 * 1 2.02959 0.71930 2.59736 1.18075 1 c - - : 1.38629 1.38629 1.38629 1.38629 0.04460 3.82535 3.82535 1.46634 0.26236 1.88776 0.16418 2 0.36208 2.71253 1.79492 2.64135 2 A - - < 1.38629 1.38629 1.38629 1.38629 0.04460 3.82535 3.82535 1.46634 0.26236 1.88776 0.16418 3 2.14964 2.83044 0.27802 2.70004 3 G - - < 1.38629 1.38629 1.38629 1.38629 0.04460 3.82535 3.82535 1.46634 0.26236 1.88776 0.16418 4 0.50965 2.50008 1.61631 2.13211 4 A - - - 1.38629 1.38629 1.38629 1.38629 0.04460 3.82535 3.82535 1.46634 0.26236 1.88776 0.16418 5 1.49359 2.06154 2.34573 0.59348 5 U - - - 1.38629 1.38629 1.38629 1.38629 0.04460 3.82535 3.82535 1.46634 0.26236 1.88776 0.16418 6 3.14583 0.25162 2.92025 2.07536 6 C - - < 1.38629 1.38629 1.38629 1.38629 0.04460 3.82535 3.82535 1.46634 0.26236 1.88776 0.16418 7 0.35951 2.72162 1.79646 2.65461 7 A - - < 1.38629 1.38629 1.38629 1.38629 0.04460 3.82535 3.82535 1.46634 0.26236 1.88776 0.16418 8 1.89226 2.72803 0.34564 2.57499 8 G - - < 1.38629 1.38629 1.38629 1.38629 0.04460 3.82535 3.82535 1.46634 0.26236 1.88776 0.16418 9 2.04411 1.57366 2.56550 0.53386 9 U - - - 1.38629 1.38629 1.38629 1.38629 0.04460 3.82535 3.82535 1.46634 0.26236 1.88776 0.16418 10 2.55741 3.19629 0.17661 3.13550 10 G - - < 1.38629 1.38629 1.38629 1.38629 0.04460 3.82535 3.82535 1.46634 0.26236 0.36071 1.19461 11 2.77908 0.51683 2.55619 1.33220 11 C - - < 1.38629 1.38629 1.38629 1.38629 0.04128 3.90104 3.90104 1.46634 0.26236 1.09861 0.40547 12 3.04541 1.63655 2.85318 0.35651 12 U - - < 1.38629 1.38629 1.38629 1.38629 0.04128 3.90104 3.90104 1.46634 0.26236 1.09861 0.40547 13 2.91073 1.79943 2.67850 0.34037 13 U - - < 1.38629 1.38629 1.38629 1.38629 0.04128 3.90104 3.90104 1.46634 0.26236 1.09861 0.40547 14 2.66003 3.35818 0.15294 3.29488 14 G - - < 1.38629 1.38629 1.38629 1.38629 0.04128 3.90104 3.90104 1.46634 0.26236 1.09861 0.40547 15 2.66013 3.35831 0.15292 3.29507 15 G - - < 1.38629 1.38629 1.38629 1.38629 0.04128 3.90104 3.90104 1.46634 0.26236 1.09861 0.40547 16 3.31344 0.21270 3.10638 2.20319 16 C - - < 1.38629 1.38629 1.38629 1.38629 0.04128 3.90104 3.90104 1.46634 0.26236 1.09861 0.40547 17 0.29578 2.91953 1.93864 2.84401 17 A - - < 1.38629 1.38629 1.38629 1.38629 0.04128 3.90104 3.90104 1.46634 0.26236 1.09861 0.40547 18 3.31311 0.21274 3.10622 2.20313 18 C - - < 1.38629 1.38629 1.38629 1.38629 0.04128 3.90104 3.90104 1.46634 0.26236 1.09861 0.40547 19 1.60607 0.58266 2.59669 1.79341 19 C - - - 1.38629 1.38629 1.38629 1.38629 0.04128 3.90104 3.90104 1.46634 0.26236 1.09861 0.40547 20 2.56225 1.51895 2.33863 0.49846 20 U - - < 1.38629 1.38629 1.38629 1.38629 0.04128 3.90104 3.90104 1.46634 0.26236 1.09861 0.40547 21 1.00654 1.94616 1.04299 1.97114 21 a - - < 1.38629 1.38629 1.38629 1.38629 0.04128 3.90104 3.90104 1.46634 0.26236 1.09861 0.40547 22 1.63331 2.35496 0.50796 2.22470 22 G - - < 1.38629 1.38629 1.38629 1.38629 0.04128 3.90104 3.90104 1.46634 0.26236 1.09861 0.40547 23 2.44509 0.85844 2.28608 0.94728 23 c - - < 1.38629 1.38629 1.38629 1.38629 0.04128 3.90104 3.90104 1.46634 0.26236 1.09861 0.40547 24 0.29536 2.92144 1.93903 2.84669 24 A - - < 1.38629 1.38629 1.38629 1.38629 0.04128 3.90104 3.90104 1.46634 0.26236 1.09861 0.40547 25 0.13597 3.36029 3.07264 3.07672 25 A - - - 1.38629 1.38629 1.38629 1.38629 0.04128 3.90104 3.90104 1.46634 0.26236 1.09861 0.40547 26 2.66288 3.36173 0.15235 3.29977 26 G - - < 1.38629 1.38629 1.38629 1.38629 0.04128 3.90104 3.90104 1.46634 0.26236 1.09861 0.40547 27 2.82657 0.46027 2.60046 1.44632 27 C - - < 1.38629 1.38629 1.38629 1.38629 0.04128 3.90104 3.90104 1.46634 0.26236 1.09861 0.40547 28 0.52437 2.52188 1.45993 2.34850 28 A - - < 1.38629 1.38629 1.38629 1.38629 0.04128 3.90104 3.90104 1.46634 0.26236 1.09861 0.40547 29 3.32060 0.21201 3.10992 2.20447 29 C - - < 1.38629 1.38629 1.38629 1.38629 0.04128 3.90104 3.90104 1.46634 0.26236 1.09861 0.40547 30 3.10789 2.00718 2.87337 0.26862 30 U - - < 1.38629 1.38629 1.38629 1.38629 0.04128 3.90104 3.90104 1.46634 0.26236 1.09861 0.40547 31 3.31829 0.21223 3.10878 2.20406 31 C - - < 1.38629 1.38629 1.38629 1.38629 0.04128 3.90104 3.90104 1.46634 0.26236 1.09861 0.40547 32 0.29550 2.92081 1.93890 2.84580 32 A - - < 1.38629 1.38629 1.38629 1.38629 0.04128 3.90104 3.90104 1.46634 0.26236 1.09861 0.40547 33 1.45134 2.41480 0.55455 2.28251 33 G - - < 1.38629 1.38629 1.38629 1.38629 0.15593 2.08618 3.90104 2.03035 0.14075 1.09861 0.40547 34 2.83350 1.56576 2.62707 0.41556 42 U - - < 1.38629 1.38629 1.38629 1.38629 0.04128 3.90104 3.90104 1.46634 0.26236 1.09861 0.40547 35 0.57300 2.78779 1.20116 2.60683 43 A - - < 1.38629 1.38629 1.38629 1.38629 0.04128 3.90104 3.90104 1.46634 0.26236 1.09861 0.40547 36 0.52293 2.29927 2.33509 1.56024 44 A - - _ 1.38629 1.38629 1.38629 1.38629 0.04128 3.90104 3.90104 1.46634 0.26236 1.09861 0.40547 37 0.49264 2.33468 2.36100 1.62038 45 A - - _ 1.38629 1.38629 1.38629 1.38629 0.04128 3.90104 3.90104 1.46634 0.26236 1.09861 0.40547 38 2.15502 1.65914 2.67787 0.46986 46 U - - _ 1.38629 1.38629 1.38629 1.38629 0.04128 3.90104 3.90104 1.46634 0.26236 1.09861 0.40547 39 0.13597 3.36029 3.07264 3.07672 47 A - - _ 1.38629 1.38629 1.38629 1.38629 0.04128 3.90104 3.90104 1.46634 0.26236 1.09861 0.40547 40 1.78449 0.86231 1.84050 1.38153 48 c - - _ 1.38629 1.38629 1.38629 1.38629 0.04128 3.90104 3.90104 1.46634 0.26236 1.09861 0.40547 41 2.34292 2.07311 2.85751 0.32747 49 U - - _ 1.38629 1.38629 1.38629 1.38629 0.04128 3.90104 3.90104 1.46634 0.26236 1.09861 0.40547 42 2.81805 1.82235 2.58669 0.35188 50 U - - > 1.38629 1.38629 1.38629 1.38629 0.04128 3.90104 3.90104 1.46634 0.26236 1.09861 0.40547 43 1.51149 2.78812 0.44053 2.60112 51 G - - > 1.38629 1.38629 1.38629 1.38629 0.04128 3.90104 3.90104 1.46634 0.26236 1.09861 0.40547 44 2.18158 1.69638 2.22128 0.51866 52 U - - > 1.38629 1.38629 1.38629 1.38629 0.04128 3.90104 3.90104 1.46634 0.26236 1.09861 0.40547 45 3.06977 2.24698 2.73128 0.24499 53 U - - > 1.38629 1.38629 1.38629 1.38629 0.04128 3.90104 3.90104 1.46634 0.26236 1.09861 0.40547 46 2.48243 3.27624 0.18308 3.07938 54 G - - > 1.38629 1.38629 1.38629 1.38629 0.04128 3.90104 3.90104 1.46634 0.26236 1.09861 0.40547 47 0.30458 3.06021 1.84404 2.85577 55 A - - > 1.38629 1.38629 1.38629 1.38629 0.04128 3.90104 3.90104 1.46634 0.26236 1.09861 0.40547 48 2.48404 3.27852 0.18267 3.08208 56 G - - > 1.38629 1.38629 1.38629 1.38629 0.04128 3.90104 3.90104 1.46634 0.26236 1.09861 0.40547 49 2.57154 1.34169 2.32230 0.57247 57 U - - > 1.38629 1.38629 1.38629 1.38629 0.04128 3.90104 3.90104 1.46634 0.26236 1.09861 0.40547 50 2.02788 2.76473 0.31425 2.58954 58 G - - > 1.38629 1.38629 1.38629 1.38629 0.04128 3.90104 3.90104 1.46634 0.26236 1.09861 0.40547 51 3.51765 0.17931 3.20846 2.36378 59 C - - > 1.38629 1.38629 1.38629 1.38629 0.04128 3.90104 3.90104 1.46634 0.26236 1.09861 0.40547 52 2.25394 0.50952 2.84091 1.44452 60 C - - - 1.38629 1.38629 1.38629 1.38629 0.04128 3.90104 3.90104 1.46634 0.26236 1.09861 0.40547 53 3.07222 2.24731 2.73225 0.24472 61 U - - > 1.38629 1.38629 1.38629 1.38629 0.04128 3.90104 3.90104 1.46634 0.26236 1.09861 0.40547 54 1.47863 2.45227 0.54657 2.23472 62 G - - > 1.38629 1.38629 1.38629 1.38629 0.04128 3.90104 3.90104 1.46634 0.26236 1.09861 0.40547 55 2.01299 0.57837 2.16628 1.65549 63 C - - > 1.38629 1.38629 1.38629 1.38629 0.04128 3.90104 3.90104 1.46634 0.26236 1.09861 0.40547 56 2.19708 1.61439 1.92406 0.60908 64 U - - > 1.38629 1.38629 1.38629 1.38629 0.04128 3.90104 3.90104 1.46634 0.26236 1.09861 0.40547 57 0.84402 2.50774 0.93622 2.33859 65 a - - > 1.38629 1.38629 1.38629 1.38629 0.04128 3.90104 3.90104 1.46634 0.26236 1.09861 0.40547 58 2.72402 2.66872 3.24579 0.19103 66 U - - - 1.38629 1.38629 1.38629 1.38629 0.04128 3.90104 3.90104 1.46634 0.26236 1.09861 0.40547 59 2.47934 3.27185 0.18388 3.07421 67 G - - > 1.38629 1.38629 1.38629 1.38629 0.04128 3.90104 3.90104 1.46634 0.26236 1.09861 0.40547 60 3.06360 2.24614 2.72882 0.24567 68 U - - > 1.38629 1.38629 1.38629 1.38629 0.04128 3.90104 3.90104 1.46634 0.26236 1.09861 0.40547 61 2.47804 3.27000 0.18421 3.07202 69 G - - > 1.38629 1.38629 1.38629 1.38629 0.04128 3.90104 3.90104 1.46634 0.26236 1.09861 0.40547 62 3.47509 0.18271 3.18919 2.35573 70 C - - > 1.38629 1.38629 1.38629 1.38629 0.04128 3.90104 3.90104 1.46634 0.26236 1.09861 0.40547 63 3.46461 0.18357 3.18438 2.35371 71 C - - > 1.38629 1.38629 1.38629 1.38629 0.04128 3.90104 3.90104 1.46634 0.26236 1.09861 0.40547 64 0.42527 2.83349 1.52353 2.66413 72 A - - > 1.38629 1.38629 1.38629 1.38629 0.08520 2.78947 3.90104 0.56408 0.84137 1.09861 0.40547 65 2.17875 3.01278 0.25530 2.76500 74 G - - > 1.38629 1.38629 1.38629 1.38629 0.04128 3.90104 3.90104 1.46634 0.26236 1.09861 0.40547 66 1.97866 2.69596 0.33789 2.51342 75 G - - > 1.38629 1.38629 1.38629 1.38629 0.04128 3.90104 3.90104 1.46634 0.26236 1.09861 0.40547 67 3.19022 0.22524 2.98407 2.20794 76 C - - > 1.38629 1.38629 1.38629 1.38629 0.08220 3.90104 2.83543 1.46634 0.26236 1.09861 0.40547 68 0.51926 1.81532 2.31721 1.93999 77 A - - - 1.38629 1.38629 1.38629 1.38629 0.08105 3.86180 2.86783 1.46634 0.26236 1.58976 0.22812 69 2.79491 1.11643 2.53355 0.63100 78 U - - > 1.38629 1.38629 1.38629 1.38629 0.04460 3.82535 3.82535 1.46634 0.26236 1.88776 0.16418 70 2.88787 2.08649 2.53665 0.29969 79 U - - > 1.38629 1.38629 1.38629 1.38629 0.04460 3.82535 3.82535 1.46634 0.26236 1.88776 0.16418 71 2.35780 3.09705 0.21539 2.91944 80 G - - > 1.38629 1.38629 1.38629 1.38629 0.04460 3.82535 3.82535 1.46634 0.26236 1.88776 0.16418 72 2.57206 2.54250 3.08790 0.22395 81 U - - - 1.38629 1.38629 1.38629 1.38629 0.04460 3.82535 3.82535 1.46634 0.26236 1.88776 0.16418 73 1.87857 2.42598 0.57638 1.62522 82 G - - - 1.38629 1.38629 1.38629 1.38629 0.04460 3.82535 3.82535 1.46634 0.26236 1.88776 0.16418 74 2.93347 0.40836 2.65390 1.55270 83 C - - > 1.38629 1.38629 1.38629 1.38629 0.04460 3.82535 3.82535 1.46634 0.26236 1.88776 0.16418 75 2.88400 2.08605 2.53522 0.30020 84 U - - > 1.38629 1.38629 1.38629 1.38629 0.09222 3.82535 2.71379 1.46634 0.26236 1.88776 0.16418 76 1.37283 2.58335 0.58449 2.17417 85 G - - : 1.38629 1.38629 1.38629 1.38629 0.04673 3.77986 3.77986 1.46634 0.26236 2.15683 0.12295 77 0.18010 3.10135 2.83909 2.79120 86 A - - : 1.38629 1.38629 1.38629 1.38629 0.02364 3.75677 * 1.46634 0.26236 0.00000 * //