INFERNAL1/a [1.1.5 | Sep 2023] NAME mir-2944 ACC RF04054 DESC mir-2944 microRNA precursor family STATES 250 NODES 56 CLEN 82 W 113 ALPH RNA RF no CONS yes MAP yes DATE Thu Jul 11 05:17:27 2024 COM [1] /hps/software/users/agb/rfam/bin/cmbuild -F CM SEED COM [2] /hps/software/users/agb/rfam/bin/cmcalibrate --cpu 8 /nfs/production/agb/rfam/15/rescan/families/RF04054/CM PBEGIN 0.05 PEND 0.05 WBETA 1e-07 QDBBETA1 1e-07 QDBBETA2 1e-15 N2OMEGA 1.52588e-05 N3OMEGA 1.52588e-05 ELSELF -0.08926734 NSEQ 6 EFFN 2.206055 CKSUM 2193051672 NULL 0.000 0.000 0.000 0.000 GA 56.00 TC 56.00 NC 55.50 EFP7GF -9.6896 0.71908 ECMLC 0.68326 -3.67608 3.83473 1600000 203186 0.005906 ECMGC 0.40417 -14.79187 -1.16395 1600000 98659 0.004054 ECMLI 0.66556 -1.43030 5.66005 1600000 134477 0.008923 ECMGI 0.41922 -9.44495 2.39968 1600000 57353 0.006974 CM [ ROOT 0 ] - - - - - - S 0 -1 0 1 4 1 1 113 151 -7.057 -7.264 -0.345 -2.333 IL 1 1 2 1 4 1 24 116 154 -1.686 -2.369 -1.117 -4.855 0.000 0.000 0.000 0.000 IR 2 2 3 2 3 1 24 115 153 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 1 ] 1 - g - - - ML 3 2 3 5 3 1 26 113 152 -7.802 -0.023 -6.456 -0.245 0.113 0.297 -0.241 D 4 2 3 5 3 0 17 110 149 -7.584 -3.097 -0.188 IL 5 5 3 5 3 1 23 114 152 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 2 ] 2 - a - - - ML 6 5 3 8 3 1 26 112 151 -8.204 -0.021 -6.522 0.587 -0.344 -0.226 -0.226 D 7 5 3 8 3 0 16 110 148 -6.626 -1.740 -0.534 IL 8 8 3 8 3 1 23 113 151 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 3 ] - 93 - A - - MR 9 8 3 11 3 1 26 111 150 -8.204 -0.021 -6.522 1.013 -0.409 -1.030 -0.436 D 10 8 3 11 3 0 15 108 147 -7.650 -2.828 -0.227 IR 11 11 3 11 3 1 23 112 150 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 4 ] - 92 - u - - MR 12 11 3 14 5 1 26 110 149 -6.953 -0.043 -6.769 -6.981 -7.872 -0.188 -0.272 0.176 0.220 D 13 11 3 14 5 0 15 107 146 -6.186 -1.541 -3.812 -5.243 -0.876 IR 14 14 3 14 5 1 23 110 149 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 5 ] 3 91 c g - - MP 15 14 3 19 6 2 27 109 148 -9.043 -8.982 -0.022 -7.759 -8.039 -8.434 -2.781 -2.532 -2.861 1.361 -2.498 -3.645 1.943 -2.942 -2.911 1.814 -3.408 -0.526 1.322 -2.976 0.489 -1.857 ML 16 14 3 19 6 1 20 107 146 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 17 14 3 19 6 1 20 107 146 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 18 14 3 19 6 0 13 102 141 -10.217 -8.915 -4.712 -5.394 -5.412 -0.133 IL 19 19 5 19 6 1 22 109 147 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 20 20 6 20 5 1 22 108 147 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 6 ] 4 90 g c - - MP 21 20 6 25 6 2 26 107 146 -9.043 -8.982 -0.090 -7.759 -4.341 -8.434 -2.931 -2.611 -2.977 0.944 -2.584 -3.729 1.676 -3.040 -3.043 2.124 -3.518 -0.556 1.582 -3.089 0.563 -1.959 ML 22 20 6 25 6 1 20 105 144 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 23 20 6 25 6 1 20 105 144 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 24 20 6 25 6 0 13 101 139 -10.217 -8.915 -4.712 -5.394 -5.412 -0.133 IL 25 25 5 25 6 1 22 107 145 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 26 26 6 26 5 1 22 106 145 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 7 ] 5 89 g c - - MP 27 26 6 31 6 2 25 105 144 -8.976 -8.915 -0.023 -7.692 -7.971 -8.366 -3.416 -2.439 -3.464 1.617 -3.705 -4.211 0.680 -3.689 -3.412 2.946 -3.867 -0.097 0.339 -3.560 -1.290 -2.371 ML 28 26 6 31 6 1 19 103 142 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 29 26 6 31 6 1 20 104 142 -7.576 -6.305 -0.861 -6.283 -1.417 -4.497 -0.253 -0.536 -0.881 0.947 D 30 26 6 31 6 0 13 99 137 -10.217 -8.915 -4.712 -5.394 -5.412 -0.133 IL 31 31 5 31 6 1 21 105 143 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 32 32 6 32 5 1 21 104 143 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 8 ] 6 88 A U - - MP 33 32 6 37 6 2 23 103 142 -9.043 -8.982 -0.022 -7.759 -8.039 -8.434 -3.536 -2.636 -3.571 3.135 -3.785 -4.827 0.500 -3.628 -3.476 1.356 -4.010 -0.157 0.081 -4.056 -1.443 -2.422 ML 34 32 6 37 6 1 18 101 140 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 35 32 6 37 6 1 18 101 140 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 36 32 6 37 6 0 13 97 135 -10.217 -8.915 -4.712 -5.394 -5.412 -0.133 IL 37 37 5 37 6 1 20 103 141 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 38 38 6 38 5 1 21 102 141 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 9 ] 7 87 A U - - MP 39 38 6 43 6 2 22 101 140 -9.043 -8.982 -0.022 -7.759 -8.039 -8.434 -3.536 -2.636 -3.571 3.135 -3.785 -4.827 0.500 -3.628 -3.476 1.356 -4.010 -0.157 0.081 -4.056 -1.443 -2.422 ML 40 38 6 43 6 1 18 100 138 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 41 38 6 43 6 1 17 99 138 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 42 38 6 43 6 0 13 96 134 -10.217 -8.915 -4.712 -5.394 -5.412 -0.133 IL 43 43 5 43 6 1 19 101 139 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 44 44 6 44 5 1 19 100 139 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 10 ] 8 86 g c - - MP 45 44 6 49 6 2 20 99 138 -9.043 -8.982 -0.022 -7.759 -8.039 -8.434 -2.729 -2.489 -2.816 1.353 -2.492 -3.610 1.696 -2.922 -2.871 1.848 -3.374 -0.494 1.607 -2.929 0.422 -1.825 ML 46 44 6 49 6 1 16 98 136 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 47 44 6 49 6 1 16 97 136 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 48 44 6 49 6 0 12 95 133 -10.217 -8.915 -4.712 -5.394 -5.412 -0.133 IL 49 49 5 49 6 1 18 99 137 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 50 50 6 50 5 1 18 99 137 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 11 ] 9 85 c g - - MP 51 50 6 55 6 2 18 97 136 -9.043 -8.982 -0.022 -7.759 -8.039 -8.434 -2.830 -2.434 -2.924 1.457 -2.665 -3.738 2.071 -3.022 -2.940 1.647 -3.434 0.558 1.181 -3.058 -0.400 -1.896 ML 52 50 6 55 6 1 15 96 134 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 53 50 6 55 6 1 14 95 134 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 54 50 6 55 6 0 12 95 133 -10.217 -8.915 -0.754 -5.394 -5.412 -1.487 IL 55 55 5 55 6 1 16 97 135 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 56 56 6 56 5 1 16 97 135 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 12 ] 10 84 c g - - MP 57 56 6 61 6 2 16 95 134 -9.150 -9.089 -0.080 -4.500 -8.146 -8.541 -2.915 -2.841 -2.995 1.466 -2.428 -3.777 2.229 -2.961 -3.007 1.023 -3.515 -0.906 1.665 -3.151 0.534 -1.969 ML 58 56 6 61 6 1 13 94 132 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 59 56 6 61 6 1 13 93 132 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 60 56 6 61 6 0 10 91 130 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 61 61 5 61 6 1 15 95 133 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 62 62 6 62 5 1 15 95 133 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 13 ] 11 83 u a - - MP 63 62 6 67 4 2 14 93 132 -3.137 -7.112 -0.394 -3.083 -2.816 -2.394 -2.916 1.501 -2.786 -3.775 1.359 -3.074 -2.941 1.665 -3.447 1.051 1.710 -3.065 -0.558 -1.912 ML 64 62 6 67 4 1 12 92 130 -4.251 -4.433 -1.000 -1.318 -0.095 -1.008 0.870 -0.435 MR 65 62 6 67 4 1 11 92 130 -4.809 -3.838 -1.706 -0.766 0.368 -0.385 -0.191 0.094 D 66 62 6 67 4 0 10 91 129 -4.568 -4.250 -2.265 -0.520 IL 67 67 5 67 4 1 15 94 133 -1.321 -1.564 -2.039 -5.777 0.000 0.000 0.000 0.000 IR 68 68 6 68 3 1 14 93 131 -1.038 -1.062 -4.874 0.000 0.000 0.000 0.000 [ MATL 14 ] 14 - U - - - ML 69 68 6 71 3 1 13 90 129 -7.790 -0.023 -6.444 -1.171 -1.224 -1.886 1.515 D 70 68 6 71 3 0 9 89 127 -7.622 -0.420 -2.014 IL 71 71 3 71 3 1 12 91 130 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 15 ] 15 - U - - - ML 72 71 3 74 3 1 12 89 128 -8.066 -0.019 -6.720 -0.834 0.064 -1.599 1.045 D 73 71 3 74 3 0 7 87 126 -6.174 -1.687 -0.566 IL 74 74 3 74 3 1 11 90 129 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 16 ] 16 - G - - - ML 75 74 3 77 3 1 11 88 127 -8.066 -0.019 -6.720 -0.770 -1.594 1.248 -0.499 D 76 74 3 77 3 0 6 87 125 -6.174 -1.687 -0.566 IL 77 77 3 77 3 1 11 89 128 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 17 ] 17 - A - - - ML 78 77 3 80 3 1 11 87 126 -8.450 -0.017 -6.768 1.020 -1.487 0.121 -0.922 D 79 77 3 80 3 0 5 86 124 -5.620 -0.734 -1.403 IL 80 80 3 80 3 1 9 88 126 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 18 ] - 79 - u - - MR 81 80 3 83 3 1 10 86 125 -8.450 -0.017 -6.768 -0.000 0.022 -0.538 0.375 D 82 80 3 83 3 0 4 84 123 -6.390 -1.568 -0.620 IR 83 83 3 83 3 1 8 87 125 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 19 ] - 78 - a - - MR 84 83 3 86 3 1 9 85 124 -8.450 -0.017 -6.768 0.922 -0.627 -0.428 -0.485 D 85 83 3 86 3 0 3 84 122 -6.390 -1.568 -0.620 IR 86 86 3 86 3 1 8 86 124 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 20 ] - 77 - u - - MR 87 86 3 89 5 1 9 84 123 -7.182 -0.037 -6.998 -7.210 -8.102 0.043 -0.392 -0.108 0.355 D 88 86 3 89 5 0 2 83 121 -5.352 -0.707 -2.978 -4.409 -2.404 IR 89 89 3 89 5 1 6 85 123 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 21 ] 18 76 A U - - MP 90 89 3 94 6 2 9 83 122 -9.150 -9.089 -0.020 -7.866 -8.146 -8.541 -3.978 -2.963 -3.982 3.440 -4.415 -5.496 -0.102 -4.011 -3.867 0.877 -4.424 -0.410 -0.519 -4.652 -2.042 -2.805 ML 91 89 3 94 6 1 4 82 120 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 92 89 3 94 6 1 4 82 120 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 93 89 3 94 6 0 1 79 117 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 94 94 5 94 6 1 5 83 121 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 95 95 6 95 5 1 6 83 121 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 22 ] 19 75 G C - - MP 96 95 6 100 6 2 7 81 120 -9.150 -9.089 -0.020 -7.866 -8.146 -8.541 -3.992 -2.696 -4.019 0.797 -4.721 -4.579 -0.155 -4.376 -3.920 3.234 -4.322 1.180 -0.434 -3.995 -2.132 -2.910 ML 97 95 6 100 6 1 3 80 118 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 98 95 6 100 6 1 3 80 118 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 99 95 6 100 6 0 1 77 116 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 100 100 5 100 6 1 4 81 119 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 101 101 6 101 5 1 5 81 119 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 23 ] 20 74 G C - - MP 102 101 6 106 4 2 5 79 118 -6.965 -8.210 -0.075 -4.664 -4.944 -3.191 -5.065 0.064 -5.517 -4.772 -0.832 -5.320 -4.458 3.683 -4.781 -0.899 -1.211 -4.600 -2.880 -3.939 ML 103 101 6 106 4 1 2 78 117 -2.408 -4.532 -1.293 -1.473 0.368 -0.385 -0.191 0.094 MR 104 101 6 106 4 1 2 78 117 -4.102 -12.528 -0.390 -2.485 0.368 -0.385 -0.191 0.094 D 105 101 6 106 4 0 0 76 115 -12.737 -14.007 -2.036 -0.404 IL 106 106 5 106 4 1 3 79 117 -2.817 -4.319 -0.613 -2.698 0.000 0.000 0.000 0.000 IR 107 107 6 107 3 1 4 79 117 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 24 ] - 73 - A - - MR 108 107 6 110 5 1 5 77 116 -7.182 -0.153 -3.580 -7.210 -8.102 1.322 -1.638 -0.477 -1.117 D 109 107 6 110 5 0 0 76 114 -5.352 -0.707 -2.978 -4.409 -2.404 IR 110 110 3 110 5 1 3 78 116 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 25 ] 21 72 A U - - MP 111 110 3 115 6 2 6 77 115 -9.096 -9.035 -0.021 -7.812 -8.091 -8.487 -3.747 -2.790 -3.769 3.303 -4.086 -5.144 0.211 -3.814 -3.663 1.126 -4.208 -0.274 -0.206 -4.339 -1.730 -2.606 ML 112 110 3 115 6 1 2 75 113 -6.840 -7.186 -0.729 -1.594 -7.035 -4.565 1.061 -0.930 -0.676 -0.389 MR 113 110 3 115 6 1 2 75 113 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 114 110 3 115 6 0 0 71 110 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 115 115 5 115 6 1 2 76 114 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 116 116 6 116 5 1 2 76 114 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 26 ] 22 71 A U - - MP 117 116 6 121 6 2 6 75 113 -9.150 -9.089 -0.020 -7.866 -8.146 -8.541 -3.978 -2.963 -3.982 3.440 -4.415 -5.496 -0.102 -4.011 -3.867 0.877 -4.424 -0.410 -0.519 -4.652 -2.042 -2.805 ML 118 116 6 121 6 1 2 73 111 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 119 116 6 121 6 1 2 73 111 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 120 116 6 121 6 0 0 70 108 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 121 121 5 121 6 1 2 74 112 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 122 122 6 122 5 1 2 74 112 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 27 ] 23 70 C G - - MP 123 122 6 127 6 2 5 73 111 -9.150 -9.089 -0.020 -7.866 -8.146 -8.541 -4.774 -4.700 -4.426 -0.912 -3.096 -4.808 3.615 -3.928 -4.483 -0.702 -4.719 -2.650 0.395 -4.828 -0.808 -3.315 ML 124 122 6 127 6 1 1 71 109 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 125 122 6 127 6 1 1 71 109 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 126 122 6 127 6 0 0 69 107 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 127 127 5 127 6 1 2 72 110 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 128 128 6 128 5 1 2 72 110 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 28 ] 24 69 U A - - MP 129 128 6 133 4 2 3 71 109 -7.057 -7.264 -0.049 -5.678 -3.448 -3.388 -3.499 0.112 -2.896 -4.250 1.271 -3.445 -3.515 0.337 -4.005 -1.479 3.129 -3.693 -0.668 -0.465 ML 130 128 6 133 4 1 1 70 108 -3.758 -3.940 -0.507 -2.670 0.368 -0.385 -0.191 0.094 MR 131 128 6 133 4 1 1 69 108 -4.809 -3.838 -1.706 -0.766 0.368 -0.385 -0.191 0.094 D 132 128 6 133 4 0 0 68 106 -4.568 -4.250 -2.265 -0.520 IL 133 133 5 133 4 1 2 71 109 -1.686 -2.369 -1.117 -4.855 0.000 0.000 0.000 0.000 IR 134 134 6 134 3 1 1 70 109 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 29 ] 25 - u - - - ML 135 134 6 137 3 1 2 69 107 -8.450 -0.017 -6.768 0.294 0.007 -1.063 0.369 D 136 134 6 137 3 0 0 67 105 -5.620 -0.734 -1.403 IL 137 137 3 137 3 1 1 69 107 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 30 ] - 68 - U - - MR 138 137 3 140 5 1 1 68 106 -7.182 -0.037 -6.998 -7.210 -8.102 -1.676 -1.639 -2.419 1.669 D 139 137 3 140 5 0 0 66 104 -5.352 -0.707 -2.978 -4.409 -2.404 IR 140 140 3 140 5 1 1 68 106 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 31 ] 26 67 c g - - MP 141 140 3 145 6 2 2 67 105 -9.150 -9.089 -0.020 -7.866 -8.146 -8.541 -2.972 -2.972 -3.028 0.508 -2.384 -3.755 2.665 -2.959 -3.044 0.694 -3.529 -1.138 1.276 -3.212 0.729 -0.002 ML 142 140 3 145 6 1 1 65 103 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 143 140 3 145 6 1 1 65 103 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 144 140 3 145 6 0 0 62 100 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 145 145 5 145 6 1 1 66 104 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 146 146 6 146 5 1 1 66 104 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 32 ] 27 66 u a - - MP 147 146 6 151 6 2 2 65 103 -9.150 -3.651 -0.139 -7.866 -8.146 -8.541 -2.096 -0.562 -2.258 0.950 -0.690 -3.092 1.652 -2.473 -2.306 1.012 -2.860 -0.643 2.130 -2.404 -0.072 -1.422 ML 148 146 6 151 6 1 1 63 101 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 149 146 6 151 6 1 1 63 101 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 150 146 6 151 6 0 0 61 99 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 151 151 5 151 6 1 1 64 102 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 152 152 6 152 5 1 1 64 102 -2.971 -0.317 -6.483 -4.650 -5.756 0.000 0.000 0.000 0.000 [ MATP 33 ] 28 64 G C - - MP 153 152 6 157 4 2 2 62 101 -7.057 -7.264 -0.049 -5.678 -4.296 -2.856 -4.334 0.572 -5.039 -4.623 -0.397 -4.707 -4.124 3.456 -4.492 0.442 -0.685 -4.163 -2.400 -3.229 ML 154 152 6 157 4 1 1 62 100 -3.758 -3.940 -0.507 -2.670 0.368 -0.385 -0.191 0.094 MR 155 152 6 157 4 1 1 61 99 -4.809 -3.838 -1.706 -0.766 0.368 -0.385 -0.191 0.094 D 156 152 6 157 4 0 0 60 98 -4.568 -4.250 -2.265 -0.520 IL 157 157 5 157 4 1 1 63 101 -1.686 -2.369 -1.117 -4.855 0.000 0.000 0.000 0.000 IR 158 158 6 158 3 1 1 62 101 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 34 ] 29 - g - - - ML 159 158 6 161 3 1 1 60 99 -8.450 -0.017 -6.768 -0.453 -0.259 0.812 -0.561 D 160 158 6 161 3 0 0 59 97 -5.620 -0.734 -1.403 IL 161 161 3 161 3 1 1 61 99 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 35 ] - 63 - G - - MR 162 161 3 164 5 1 1 59 98 -7.182 -0.037 -6.998 -7.210 -8.102 -1.797 -3.049 1.768 -2.437 D 163 161 3 164 5 0 0 58 96 -5.352 -0.707 -2.978 -4.409 -2.404 IR 164 164 3 164 5 1 1 60 98 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 36 ] 30 62 U A - - MP 165 164 3 169 6 2 2 58 97 -9.150 -9.089 -0.020 -7.866 -8.146 -8.541 -4.433 -4.263 -4.244 -0.541 -3.135 -4.785 1.198 -3.847 -4.246 -0.321 -4.608 -2.154 3.432 -4.574 -0.806 -3.045 ML 166 164 3 169 6 1 1 57 95 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 167 164 3 169 6 1 1 56 95 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 168 164 3 169 6 0 0 53 91 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 169 169 5 169 6 1 1 58 96 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 170 170 6 170 5 1 1 58 96 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 37 ] 31 61 G C - - MP 171 170 6 175 6 2 2 56 95 -9.150 -9.089 -0.020 -7.866 -8.146 -8.541 -4.944 -3.191 -5.065 0.064 -5.517 -4.772 -0.832 -5.320 -4.458 3.683 -4.781 -0.899 -1.211 -4.600 -2.880 -3.939 ML 172 170 6 175 6 1 1 55 93 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 173 170 6 175 6 1 1 54 93 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 174 170 6 175 6 0 0 51 89 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 175 175 5 175 6 1 1 56 94 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 176 176 6 176 5 1 1 56 94 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 38 ] 32 60 U A - - MP 177 176 6 181 6 2 2 54 93 -9.150 -9.089 -0.020 -7.866 -8.146 -8.541 -4.433 -4.263 -4.244 -0.541 -3.135 -4.785 1.198 -3.847 -4.246 -0.321 -4.608 -2.154 3.432 -4.574 -0.806 -3.045 ML 178 176 6 181 6 1 1 53 91 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 179 176 6 181 6 1 1 52 91 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 180 176 6 181 6 0 0 49 87 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 181 181 5 181 6 1 1 54 92 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 182 182 6 182 5 1 1 54 92 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 39 ] 33 59 G C - - MP 183 182 6 187 6 2 2 52 91 -9.150 -9.089 -0.020 -7.866 -8.146 -8.541 -4.944 -3.191 -5.065 0.064 -5.517 -4.772 -0.832 -5.320 -4.458 3.683 -4.781 -0.899 -1.211 -4.600 -2.880 -3.939 ML 184 182 6 187 6 1 1 51 89 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 185 182 6 187 6 1 1 50 89 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 186 182 6 187 6 0 0 47 85 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 187 187 5 187 6 1 1 52 90 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 188 188 6 188 5 1 1 52 90 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 40 ] 34 58 A U - - MP 189 188 6 193 6 2 2 50 89 -9.150 -9.089 -0.020 -7.866 -8.146 -8.541 -3.978 -2.963 -3.982 3.440 -4.415 -5.496 -0.102 -4.011 -3.867 0.877 -4.424 -0.410 -0.519 -4.652 -2.042 -2.805 ML 190 188 6 193 6 1 1 49 87 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 191 188 6 193 6 1 1 48 87 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 192 188 6 193 6 0 0 45 84 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 193 193 5 193 6 1 1 50 88 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 194 194 6 194 5 1 1 50 88 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 41 ] 35 57 U A - - MP 195 194 6 199 6 2 2 48 87 -9.150 -9.089 -0.020 -7.866 -8.146 -8.541 -4.433 -4.263 -4.244 -0.541 -3.135 -4.785 1.198 -3.847 -4.246 -0.321 -4.608 -2.154 3.432 -4.574 -0.806 -3.045 ML 196 194 6 199 6 1 1 47 85 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 197 194 6 199 6 1 1 46 85 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 198 194 6 199 6 0 0 43 82 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 199 199 5 199 6 1 1 48 86 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 200 200 6 200 5 1 1 48 86 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 42 ] 36 56 a u - - MP 201 200 6 205 6 2 2 46 85 -9.150 -9.089 -0.020 -7.866 -8.146 -8.541 -2.027 -1.947 -2.208 1.891 -2.202 -3.022 1.286 -0.785 -2.247 1.390 -2.777 0.370 1.081 -2.336 -0.307 -0.287 ML 202 200 6 205 6 1 1 45 83 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 203 200 6 205 6 1 1 45 83 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 204 200 6 205 6 0 0 42 80 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 205 205 5 205 6 1 1 46 84 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 206 206 6 206 5 1 1 46 84 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 43 ] 37 55 u a - - MP 207 206 6 211 6 2 2 45 83 -9.150 -9.089 -0.020 -7.866 -8.146 -8.541 -3.720 -3.689 -3.631 -0.018 -2.648 -4.229 1.662 -3.339 -3.648 0.201 -4.055 -1.729 2.945 -3.882 0.823 -2.534 ML 208 206 6 211 6 1 1 43 81 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 209 206 6 211 6 1 1 43 81 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 210 206 6 211 6 0 0 41 79 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 211 211 5 211 6 1 1 44 82 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 212 212 6 212 5 1 1 44 82 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 44 ] 38 54 G C - - MP 213 212 6 217 4 2 2 43 81 -7.057 -7.264 -0.049 -5.678 -3.779 -2.583 -3.776 1.352 -4.436 -4.430 0.104 -4.168 -3.799 3.147 -4.200 0.620 -0.174 -3.772 -1.864 -2.693 ML 214 212 6 217 4 1 1 42 80 -3.758 -3.940 -0.507 -2.670 0.368 -0.385 -0.191 0.094 MR 215 212 6 217 4 1 1 41 79 -4.809 -3.838 -1.706 -0.766 0.368 -0.385 -0.191 0.094 D 216 212 6 217 4 0 0 40 78 -4.568 -4.250 -2.265 -0.520 IL 217 217 5 217 4 1 1 43 81 -1.686 -2.369 -1.117 -4.855 0.000 0.000 0.000 0.000 IR 218 218 6 218 3 1 1 42 81 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 45 ] 39 - U - - - ML 219 218 6 221 3 1 1 40 79 -8.066 -0.019 -6.720 -0.351 -1.016 -1.479 1.240 D 220 218 6 221 3 0 0 39 77 -6.174 -1.687 -0.566 IL 221 221 3 221 3 1 1 41 80 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 46 ] 40 - g - - - ML 222 221 3 224 3 1 1 39 78 -8.066 -0.151 -3.387 0.020 -0.939 0.343 0.258 D 223 221 3 224 3 0 0 38 76 -6.174 -1.687 -0.566 IL 224 224 3 224 3 1 1 40 79 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 47 ] 41 - a - - - ML 225 224 3 227 3 1 1 39 77 -7.936 -0.021 -6.590 0.408 -0.344 -0.345 0.135 D 226 224 3 227 3 0 0 37 75 -7.065 -0.671 -1.457 IL 227 227 3 227 3 1 1 39 78 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 48 ] 42 - u - - - ML 228 227 3 230 3 1 1 38 76 -8.066 -0.019 -6.720 -0.111 0.040 -1.187 0.684 D 229 227 3 230 3 0 0 35 74 -6.174 -1.687 -0.566 IL 230 230 3 230 3 1 1 38 77 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 49 ] 43 - U - - - ML 231 230 3 233 3 1 1 37 75 -8.066 -0.019 -6.720 -0.985 -0.417 -1.732 1.290 D 232 230 3 233 3 0 0 34 73 -6.174 -1.687 -0.566 IL 233 233 3 233 3 1 1 37 76 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 50 ] 44 - u - - - ML 234 233 3 236 3 1 1 36 74 -8.066 -0.019 -6.720 0.287 -0.420 -0.446 0.377 D 235 233 3 236 3 0 0 33 72 -6.174 -1.687 -0.566 IL 236 236 3 236 3 1 1 36 75 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 51 ] 45 - u - - - ML 237 236 3 239 3 1 1 35 73 -8.066 -0.019 -6.720 -0.341 -0.350 -0.228 0.652 D 238 236 3 239 3 0 0 32 70 -6.174 -1.687 -0.566 IL 239 239 3 239 3 1 1 35 74 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 52 ] 46 - A - - - ML 240 239 3 242 3 1 1 34 72 -8.066 -0.143 -3.468 1.298 -0.780 -1.332 -0.832 D 241 239 3 242 3 0 0 31 69 -6.174 -1.687 -0.566 IL 242 242 3 242 3 1 1 35 73 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 53 ] 47 - a - - - ML 243 242 3 245 3 1 1 33 71 -2.221 -0.367 -6.598 0.746 -0.886 -1.038 0.372 D 244 242 3 245 3 0 0 25 63 -7.024 -0.695 -1.416 IL 245 245 3 245 3 1 1 35 73 -0.694 -1.464 -5.687 0.000 0.000 0.000 0.000 [ MATL 54 ] 53 - u - - - ML 246 245 3 248 2 1 1 1 1 * 0.000 0.578 -0.897 -1.104 0.590 D 247 245 3 248 2 0 0 0 0 * 0.000 IL 248 248 3 248 2 1 1 13 28 -1.823 -0.479 0.000 0.000 0.000 0.000 [ END 55 ] - - - - - - E 249 248 3 -1 0 0 0 0 0 // HMMER3/f [3.4 | Aug 2023] NAME mir-2944 ACC RF04054 DESC mir-2944 microRNA precursor family LENG 82 MAXL 168 ALPH RNA RF no MM no CONS yes CS yes MAP yes DATE Thu Jul 11 05:17:27 2024 COM [1] /hps/software/users/agb/rfam/bin/cmbuild -F CM SEED COM [2] /hps/software/users/agb/rfam/bin/cmcalibrate --cpu 8 /nfs/production/agb/rfam/15/rescan/families/RF04054/CM NSEQ 6 EFFN 4.262695 CKSUM 2193051672 STATS LOCAL MSV -8.6377 0.71908 STATS LOCAL VITERBI -9.4461 0.71908 STATS LOCAL FORWARD -3.8707 0.71908 HMM A C G U m->m m->i m->d i->m i->i d->m d->d COMPO 1.34453 1.61917 1.42676 1.20001 1.38629 1.38629 1.38629 1.38629 0.26744 4.19016 1.51631 1.46634 0.26236 0.00000 * 1 1.78058 1.20053 1.01685 1.77967 1 g - - : 1.38629 1.38629 1.38629 1.38629 0.03881 3.96153 3.96153 1.46634 0.26236 2.80309 0.06254 2 0.92409 1.60653 1.52137 1.69220 2 a - - : 1.38629 1.38629 1.38629 1.38629 0.03881 3.96153 3.96153 1.46634 0.26236 2.80309 0.06254 3 1.61673 1.33213 1.32276 1.30512 3 u - - < 1.38629 1.38629 1.38629 1.38629 0.03881 3.96153 3.96153 1.46634 0.26236 2.80309 0.06254 4 2.03067 1.64015 1.05395 1.12011 4 g - - < 1.38629 1.38629 1.38629 1.38629 0.21076 3.96153 1.76612 1.46634 0.26236 2.80309 0.06254 5 1.46164 2.51458 0.51691 2.39811 5 G - - < 1.38629 1.38629 1.38629 1.38629 0.04593 3.79670 3.79670 1.46634 0.26236 1.00242 0.45727 6 0.24787 3.10164 2.07617 3.01276 6 A - - < 1.38629 1.38629 1.38629 1.38629 0.03881 3.96153 3.96153 1.46634 0.26236 2.80309 0.06254 7 0.24762 3.10307 2.07650 3.01470 7 A - - < 1.38629 1.38629 1.38629 1.38629 0.03881 3.96153 3.96153 1.46634 0.26236 2.80309 0.06254 8 1.62223 1.57927 1.28844 1.13720 8 u - - < 1.38629 1.38629 1.38629 1.38629 0.03881 3.96153 3.96153 1.46634 0.26236 2.80309 0.06254 9 1.56897 1.14629 1.26133 1.65731 9 c - - < 1.38629 1.38629 1.38629 1.38629 0.03881 3.96153 3.96153 1.46634 0.26236 0.12925 2.10995 10 1.53363 1.11838 1.99340 1.13567 10 c - - < 1.38629 1.38629 1.38629 1.38629 0.03076 4.19016 4.19016 1.46634 0.26236 1.09861 0.40547 11 1.55241 1.97489 1.00534 1.26031 11 g - - < 1.38629 1.38629 1.38629 1.38629 0.43497 2.08790 1.47504 0.77925 0.61387 1.09861 0.40547 12 2.84662 2.77094 3.37249 0.16836 14 U - - - 1.38629 1.38629 1.38629 1.38629 0.03928 3.94984 3.94984 1.46634 0.26236 0.12433 2.14630 13 2.37803 1.28938 2.93406 0.54707 15 U - - - 1.38629 1.38629 1.38629 1.38629 0.03076 4.19016 4.19016 1.46634 0.26236 1.09861 0.40547 14 2.36674 2.97758 0.34470 1.91825 16 G - - - 1.38629 1.38629 1.38629 1.38629 0.03076 4.19016 4.19016 1.46634 0.26236 1.09861 0.40547 15 0.56292 2.87638 1.22546 2.51957 17 A - - - 1.38629 1.38629 1.38629 1.38629 0.03076 4.19016 4.19016 1.46634 0.26236 1.09861 0.40547 16 0.13972 3.73014 2.53279 3.61305 18 A - - < 1.38629 1.38629 1.38629 1.38629 0.03076 4.19016 4.19016 1.46634 0.26236 1.09861 0.40547 17 2.40164 3.30060 0.18706 3.14244 19 G - - < 1.38629 1.38629 1.38629 1.38629 0.03076 4.19016 4.19016 1.46634 0.26236 1.09861 0.40547 18 3.07857 3.96017 0.08908 3.90505 20 G - - < 1.38629 1.38629 1.38629 1.38629 0.03076 4.19016 4.19016 1.46634 0.26236 1.09861 0.40547 19 0.20550 3.25152 2.29547 3.07197 21 A - - < 1.38629 1.38629 1.38629 1.38629 0.03076 4.19016 4.19016 1.46634 0.26236 1.09861 0.40547 20 0.15520 3.57271 2.49076 3.41652 22 A - - < 1.38629 1.38629 1.38629 1.38629 0.03076 4.19016 4.19016 1.46634 0.26236 1.09861 0.40547 21 3.80597 0.11879 3.74229 2.71710 23 C - - < 1.38629 1.38629 1.38629 1.38629 0.03076 4.19016 4.19016 1.46634 0.26236 1.09861 0.40547 22 3.10414 2.25726 2.92973 0.22679 24 U - - < 1.38629 1.38629 1.38629 1.38629 0.03076 4.19016 4.19016 1.46634 0.26236 1.09861 0.40547 23 1.16421 1.31503 2.31174 1.13857 25 u - - - 1.38629 1.38629 1.38629 1.38629 0.03076 4.19016 4.19016 1.46634 0.26236 1.09861 0.40547 24 2.64145 0.68185 2.44639 1.08929 26 C - - < 1.38629 1.38629 1.38629 1.38629 0.03076 4.19016 4.19016 1.46634 0.26236 1.09861 0.40547 25 1.68556 1.40116 1.94039 0.85637 27 u - - < 1.38629 1.38629 1.38629 1.38629 0.03076 4.19016 4.19016 1.46634 0.26236 1.09861 0.40547 26 2.60558 3.48686 0.15037 3.34815 28 G - - < 1.38629 1.38629 1.38629 1.38629 0.03076 4.19016 4.19016 1.46634 0.26236 1.09861 0.40547 27 2.05929 1.53775 0.60749 2.18146 29 G - - - 1.38629 1.38629 1.38629 1.38629 0.03076 4.19016 4.19016 1.46634 0.26236 1.09861 0.40547 28 3.92281 2.65798 3.76332 0.12000 30 U - - < 1.38629 1.38629 1.38629 1.38629 0.03076 4.19016 4.19016 1.46634 0.26236 1.09861 0.40547 29 3.07995 3.96225 0.08890 3.90786 31 G - - < 1.38629 1.38629 1.38629 1.38629 0.03076 4.19016 4.19016 1.46634 0.26236 1.09861 0.40547 30 3.91618 2.65722 3.75966 0.12031 32 U - - < 1.38629 1.38629 1.38629 1.38629 0.03076 4.19016 4.19016 1.46634 0.26236 1.09861 0.40547 31 3.07729 3.95825 0.08924 3.90245 33 G - - < 1.38629 1.38629 1.38629 1.38629 0.03076 4.19016 4.19016 1.46634 0.26236 1.09861 0.40547 32 0.14024 3.72434 2.53132 3.60568 34 A - - < 1.38629 1.38629 1.38629 1.38629 0.03076 4.19016 4.19016 1.46634 0.26236 1.09861 0.40547 33 3.90761 2.65624 3.75491 0.12070 35 U - - < 1.38629 1.38629 1.38629 1.38629 0.03076 4.19016 4.19016 1.46634 0.26236 1.09861 0.40547 34 1.14040 1.64201 1.35226 1.47813 36 a - - < 1.38629 1.38629 1.38629 1.38629 0.03076 4.19016 4.19016 1.46634 0.26236 1.09861 0.40547 35 3.13093 1.86322 2.93413 0.29039 37 U - - < 1.38629 1.38629 1.38629 1.38629 0.03076 4.19016 4.19016 1.46634 0.26236 1.09861 0.40547 36 1.74535 2.93157 0.34294 2.77383 38 G - - < 1.38629 1.38629 1.38629 1.38629 0.03076 4.19016 4.19016 1.46634 0.26236 1.09861 0.40547 37 1.80076 2.46179 2.83419 0.36994 39 U - - _ 1.38629 1.38629 1.38629 1.38629 0.03076 4.19016 4.19016 1.46634 0.26236 1.09861 0.40547 38 1.44192 2.23841 1.02969 1.20470 40 g - - _ 1.38629 1.38629 1.38629 1.38629 0.14577 4.19016 2.11608 1.46634 0.26236 1.09861 0.40547 39 1.07926 1.62369 1.62324 1.32529 41 a - - _ 1.38629 1.38629 1.38629 1.38629 0.03444 4.07883 4.07883 1.46634 0.26236 0.22422 1.60515 40 1.53524 1.28671 2.43485 0.86558 42 u - - _ 1.38629 1.38629 1.38629 1.38629 0.03076 4.19016 4.19016 1.46634 0.26236 1.09861 0.40547 41 2.54971 1.75990 3.08089 0.35110 43 U - - _ 1.38629 1.38629 1.38629 1.38629 0.03076 4.19016 4.19016 1.46634 0.26236 1.09861 0.40547 42 1.17297 1.71170 1.70287 1.11524 44 u - - _ 1.38629 1.38629 1.38629 1.38629 0.03076 4.19016 4.19016 1.46634 0.26236 1.09861 0.40547 43 1.80204 1.64598 1.49006 0.87502 45 u - - _ 1.38629 1.38629 1.38629 1.38629 0.03076 4.19016 4.19016 1.46634 0.26236 1.09861 0.40547 44 0.34433 2.00118 2.72703 2.40006 46 A - - _ 1.38629 1.38629 1.38629 1.38629 0.13846 4.19016 2.17014 1.46634 0.26236 1.09861 0.40547 45 0.77679 2.21297 2.32543 1.09960 47 a - - _ 1.38629 1.38629 1.38629 1.38629 0.35515 1.26540 4.08589 1.38656 0.28759 0.23531 1.56218 46 0.91443 2.24760 2.38938 0.91151 53 u - - _ 1.38629 1.38629 1.38629 1.38629 0.03076 4.19016 4.19016 1.46634 0.26236 1.09861 0.40547 47 3.01788 0.49413 2.74102 1.28559 54 C - - > 1.38629 1.38629 1.38629 1.38629 0.03076 4.19016 4.19016 1.46634 0.26236 1.09861 0.40547 48 0.48440 3.09881 1.26055 2.89437 55 A - - > 1.38629 1.38629 1.38629 1.38629 0.03076 4.19016 4.19016 1.46634 0.26236 1.09861 0.40547 49 1.98850 1.81257 1.75829 0.63956 56 U - - > 1.38629 1.38629 1.38629 1.38629 0.03076 4.19016 4.19016 1.46634 0.26236 1.09861 0.40547 50 0.13727 3.95091 2.48983 3.64577 57 A - - > 1.38629 1.38629 1.38629 1.38629 0.03076 4.19016 4.19016 1.46634 0.26236 1.09861 0.40547 51 3.81870 2.90715 3.52967 0.11194 58 U - - > 1.38629 1.38629 1.38629 1.38629 0.03076 4.19016 4.19016 1.46634 0.26236 1.09861 0.40547 52 4.06213 0.10791 3.81562 2.76381 59 C - - > 1.38629 1.38629 1.38629 1.38629 0.03076 4.19016 4.19016 1.46634 0.26236 1.09861 0.40547 53 0.13661 3.96024 2.49154 3.65538 60 A - - > 1.38629 1.38629 1.38629 1.38629 0.03076 4.19016 4.19016 1.46634 0.26236 1.09861 0.40547 54 4.08178 0.10704 3.82548 2.76736 61 C - - > 1.38629 1.38629 1.38629 1.38629 0.03076 4.19016 4.19016 1.46634 0.26236 1.09861 0.40547 55 0.13561 3.97473 2.49416 3.67030 62 A - - > 1.38629 1.38629 1.38629 1.38629 0.03076 4.19016 4.19016 1.46634 0.26236 1.09861 0.40547 56 3.41876 4.37680 0.06715 3.93074 63 G - - - 1.38629 1.38629 1.38629 1.38629 0.03076 4.19016 4.19016 1.46634 0.26236 1.09861 0.40547 57 3.52988 0.25888 3.29968 1.82089 64 C - - > 1.38629 1.38629 1.38629 1.38629 0.29263 1.43316 4.19016 0.12246 2.16059 1.09861 0.40547 58 0.84690 1.72021 1.43191 1.87485 66 a - - > 1.38629 1.38629 1.38629 1.38629 0.03076 4.19016 4.19016 1.46634 0.26236 1.09861 0.40547 59 2.04961 2.61891 0.46983 1.75318 67 G - - > 1.38629 1.38629 1.38629 1.38629 0.03076 4.19016 4.19016 1.46634 0.26236 1.09861 0.40547 60 3.32211 3.17197 3.85973 0.10433 68 U - - - 1.38629 1.38629 1.38629 1.38629 0.03076 4.19016 4.19016 1.46634 0.26236 1.09861 0.40547 61 0.32119 3.13505 2.09443 2.22492 69 A - - > 1.38629 1.38629 1.38629 1.38629 0.03076 4.19016 4.19016 1.46634 0.26236 1.09861 0.40547 62 3.03282 4.00567 0.09404 3.75682 70 G - - > 1.38629 1.38629 1.38629 1.38629 0.03076 4.19016 4.19016 1.46634 0.26236 1.09861 0.40547 63 3.81830 2.90708 3.52948 0.11196 71 U - - > 1.38629 1.38629 1.38629 1.38629 0.14577 4.19016 2.11608 1.46634 0.26236 1.09861 0.40547 64 3.56493 2.66946 3.24790 0.14670 72 U - - > 1.38629 1.38629 1.38629 1.38629 0.03444 4.07883 4.07883 1.46634 0.26236 0.22422 1.60515 65 0.34663 3.00094 1.73869 2.69653 73 A - - - 1.38629 1.38629 1.38629 1.38629 0.03076 4.19016 4.19016 1.46634 0.26236 1.09861 0.40547 66 4.07019 0.10755 3.81968 2.76527 74 C - - > 1.38629 1.38629 1.38629 1.38629 0.03076 4.19016 4.19016 1.46634 0.26236 1.09861 0.40547 67 3.37530 0.41932 3.11774 1.33166 75 C - - > 1.38629 1.38629 1.38629 1.38629 0.03076 4.19016 4.19016 1.46634 0.26236 1.09861 0.40547 68 3.85177 2.91312 3.54516 0.11027 76 U - - > 1.38629 1.38629 1.38629 1.38629 0.03076 4.19016 4.19016 1.46634 0.26236 1.09861 0.40547 69 1.40040 1.67671 1.40425 1.13643 77 u - - - 1.38629 1.38629 1.38629 1.38629 0.03076 4.19016 4.19016 1.46634 0.26236 1.09861 0.40547 70 0.63963 1.86063 1.72267 1.97799 78 A - - - 1.38629 1.38629 1.38629 1.38629 0.03076 4.19016 4.19016 1.46634 0.26236 1.09861 0.40547 71 1.43601 1.30666 1.77343 1.13429 79 u - - - 1.38629 1.38629 1.38629 1.38629 0.29263 2.08790 2.04213 1.13229 0.38904 1.09861 0.40547 72 1.33079 1.77318 1.76489 0.92954 83 u - - > 1.38629 1.38629 1.38629 1.38629 0.03481 4.06843 4.06843 1.46634 0.26236 0.20980 1.66468 73 1.49416 2.16403 0.86951 1.42071 84 g - - > 1.38629 1.38629 1.38629 1.38629 0.26744 4.19016 1.51631 1.46634 0.26236 1.09861 0.40547 74 1.87899 1.73203 1.04392 1.14489 85 g - - > 1.38629 1.38629 1.38629 1.38629 0.03881 3.96153 3.96153 1.46634 0.26236 2.80309 0.06254 75 1.47860 1.40794 1.22234 1.45733 86 g - - > 1.38629 1.38629 1.38629 1.38629 0.03881 3.96153 3.96153 1.46634 0.26236 2.80309 0.06254 76 3.16082 2.39063 2.88457 0.21053 87 U - - > 1.38629 1.38629 1.38629 1.38629 0.03881 3.96153 3.96153 1.46634 0.26236 2.80309 0.06254 77 3.10980 2.38203 2.86172 0.21585 88 U - - > 1.38629 1.38629 1.38629 1.38629 0.03881 3.96153 3.96153 1.46634 0.26236 2.80309 0.06254 78 2.56374 0.64814 2.34132 1.19150 89 C - - > 1.38629 1.38629 1.38629 1.38629 0.03881 3.96153 3.96153 1.46634 0.26236 2.80309 0.06254 79 1.52433 1.14029 1.21121 1.80380 90 c - - > 1.38629 1.38629 1.38629 1.38629 0.03881 3.96153 3.96153 1.46634 0.26236 2.80309 0.06254 80 1.76323 1.44065 1.02377 1.45888 91 g - - > 1.38629 1.38629 1.38629 1.38629 0.03881 3.96153 3.96153 1.46634 0.26236 2.80309 0.06254 81 1.66160 1.56076 1.13967 1.27203 92 g - - : 1.38629 1.38629 1.38629 1.38629 0.03881 3.96153 3.96153 1.46634 0.26236 2.80309 0.06254 82 0.54522 1.67453 2.37843 1.96475 93 A - - : 1.38629 1.38629 1.38629 1.38629 0.01959 3.94231 * 1.46634 0.26236 0.00000 * //