INFERNAL1/a [1.1.5 | Sep 2023] NAME mir-7927 ACC RF04048 DESC mir-7927 microRNA precursor family STATES 172 NODES 38 CLEN 56 W 71 ALPH RNA RF no CONS yes MAP yes DATE Wed Jul 10 09:59:24 2024 COM [1] /hps/software/users/agb/rfam/bin/cmbuild -F CM SEED COM [2] /hps/software/users/agb/rfam/bin/cmcalibrate --cpu 8 /nfs/production/agb/rfam/15/rescan/families/RF04048/CM PBEGIN 0.05 PEND 0.05 WBETA 1e-07 QDBBETA1 1e-07 QDBBETA2 1e-15 N2OMEGA 1.52588e-05 N3OMEGA 1.52588e-05 ELSELF -0.08926734 NSEQ 5 EFFN 2.641602 CKSUM 1197498442 NULL 0.000 0.000 0.000 0.000 GA 75.00 TC 75.00 NC 74.40 EFP7GF -11.2172 0.71942 ECMLC 0.62818 -5.28833 3.58190 1600000 315592 0.003802 ECMGC 0.45834 -15.13194 -1.46336 1600000 210292 0.001902 ECMLI 0.62101 -4.26059 4.34387 1600000 251087 0.004779 ECMGI 0.51347 -10.84801 0.88754 1600000 165588 0.002416 CM [ ROOT 0 ] - - - - - - S 0 -1 0 1 4 1 1 71 90 -7.110 -8.356 -0.068 -4.809 IL 1 1 2 1 4 1 1 72 91 -2.817 -4.319 -0.613 -2.698 0.000 0.000 0.000 0.000 IR 2 2 3 2 3 1 2 73 92 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 1 ] - 56 - U - - MR 3 2 3 5 3 1 3 71 90 -8.588 -0.016 -6.906 -1.956 -1.872 -2.710 1.730 D 4 2 3 5 3 0 0 69 88 -6.390 -1.568 -0.620 IR 5 5 3 5 3 1 2 72 91 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 2 ] - 55 - g - - MR 6 5 3 8 5 1 3 70 89 -7.312 -0.033 -7.128 -7.340 -8.232 0.485 -1.704 0.876 -1.123 D 7 5 3 8 5 0 0 68 88 -5.352 -0.707 -2.978 -4.409 -2.404 IR 8 8 3 8 5 1 1 70 89 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 3 ] 1 54 c g - - MP 9 8 3 13 6 2 4 69 88 -9.215 -9.154 -0.020 -7.931 -8.210 -8.605 -2.293 -2.336 -2.449 0.674 -2.150 0.076 2.438 -0.020 -2.471 0.694 -2.975 -0.812 1.171 -2.594 -0.163 -1.608 ML 10 8 3 13 6 1 1 67 86 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 11 8 3 13 6 1 1 67 86 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 12 8 3 13 6 0 0 65 84 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 13 13 5 13 6 1 1 68 88 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 14 14 6 14 5 1 1 68 87 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 4 ] 2 53 g u - - MP 15 14 6 19 6 2 4 67 86 -9.215 -9.154 -0.020 -7.931 -8.210 -8.605 -3.841 -2.570 -3.990 0.945 -4.938 -5.254 -0.453 -4.122 -3.706 2.197 -4.208 2.850 -0.711 -4.466 -2.399 -2.723 ML 16 14 6 19 6 1 1 65 84 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 17 14 6 19 6 1 1 65 84 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 18 14 6 19 6 0 0 63 82 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 19 19 5 19 6 1 1 66 86 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 20 20 6 20 5 1 1 66 85 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 5 ] 3 52 G C - - MP 21 20 6 25 6 2 4 65 84 -9.215 -9.154 -0.020 -7.931 -8.210 -8.605 -4.094 -2.761 -4.120 0.744 -4.931 -4.718 -0.320 -4.481 -4.013 3.199 -4.418 1.486 -0.590 -4.120 -2.300 -2.994 ML 22 20 6 25 6 1 1 63 82 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 23 20 6 25 6 1 1 63 82 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 24 20 6 25 6 0 0 61 80 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 25 25 5 25 6 1 1 64 84 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 26 26 6 26 5 1 1 64 83 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 6 ] 4 51 g u - - MP 27 26 6 31 6 2 3 63 82 -9.215 -9.154 -0.020 -7.931 -8.210 -8.605 -3.766 -2.542 -3.942 1.980 -4.951 -5.517 -0.559 -4.032 -3.626 1.134 -4.169 2.937 -0.787 -4.596 -2.472 -2.651 ML 28 26 6 31 6 1 1 61 80 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 29 26 6 31 6 1 1 61 80 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 30 26 6 31 6 0 0 59 78 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 31 31 5 31 6 1 1 62 82 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 32 32 6 32 5 1 1 62 81 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 7 ] 5 50 G C - - MP 33 32 6 37 6 2 3 61 80 -9.215 -9.154 -0.020 -7.931 -8.210 -8.605 -3.914 -2.842 -3.986 0.540 -4.319 -4.415 -0.062 -4.312 0.128 3.342 -4.277 -0.598 -0.367 -3.904 -1.963 -2.972 ML 34 32 6 37 6 1 1 59 78 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 35 32 6 37 6 1 1 59 78 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 36 32 6 37 6 0 0 57 76 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 37 37 5 37 6 1 1 60 80 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 38 38 6 38 5 1 1 60 79 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 8 ] 6 49 C G - - MP 39 38 6 43 6 2 3 59 78 -9.215 -9.154 -0.020 -7.931 -8.210 -8.605 -5.099 -5.051 -4.693 -1.242 -3.301 -5.032 3.690 -4.166 -4.766 -1.068 -4.962 -3.011 0.150 -5.130 -1.026 -3.589 ML 40 38 6 43 6 1 1 57 76 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 41 38 6 43 6 1 1 57 76 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 42 38 6 43 6 0 0 55 74 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 43 43 5 43 6 1 1 58 78 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 44 44 6 44 5 1 1 58 77 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 9 ] 7 48 G U - - MP 45 44 6 49 6 2 2 57 76 -9.215 -9.154 -0.020 -7.931 -8.210 -8.605 -3.937 -2.626 -4.125 0.914 -5.097 -5.853 -0.650 -4.113 -3.718 0.920 -4.261 3.354 -0.996 -4.967 -2.589 -2.770 ML 46 44 6 49 6 1 1 55 74 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 47 44 6 49 6 1 1 55 74 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 48 44 6 49 6 0 0 53 72 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 49 49 5 49 6 1 1 56 76 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 50 50 6 50 5 1 1 56 75 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 10 ] 8 47 u g - - MP 51 50 6 55 6 2 2 55 74 -9.215 -9.154 -0.020 -7.931 -8.210 -8.605 -4.366 -4.418 -4.037 -0.710 -2.714 -4.414 2.216 -3.525 -4.090 -0.547 -4.364 -2.533 0.739 -4.406 2.905 -2.944 ML 52 50 6 55 6 1 1 53 72 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 53 50 6 55 6 1 1 53 72 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 54 50 6 55 6 0 0 51 70 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 55 55 5 55 6 1 1 54 74 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 56 56 6 56 5 1 1 54 73 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 11 ] 9 46 U A - - MP 57 56 6 61 6 2 2 53 72 -9.215 -9.154 -0.020 -7.931 -8.210 -8.605 -4.808 -4.643 -4.575 -0.900 -3.394 -5.080 0.942 -4.129 -4.575 -0.722 -4.917 -2.523 3.558 -4.931 -1.056 -3.327 ML 58 56 6 61 6 1 1 51 71 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 59 56 6 61 6 1 1 51 71 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 60 56 6 61 6 0 0 49 68 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 61 61 5 61 6 1 1 52 72 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 62 62 6 62 5 1 1 52 71 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 12 ] 10 45 U A - - MP 63 62 6 67 6 2 2 51 70 -9.215 -9.154 -0.020 -7.931 -8.210 -8.605 -4.808 -4.643 -4.575 -0.900 -3.394 -5.080 0.942 -4.129 -4.575 -0.722 -4.917 -2.523 3.558 -4.931 -1.056 -3.327 ML 64 62 6 67 6 1 1 50 69 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 65 62 6 67 6 1 1 50 69 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 66 62 6 67 6 0 0 48 68 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 67 67 5 67 6 1 1 51 70 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 68 68 6 68 5 1 1 50 69 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 13 ] 11 44 C G - - MP 69 68 6 73 4 2 2 49 68 -7.214 -7.421 -0.044 -5.835 -5.099 -5.051 -4.693 -1.242 -3.301 -5.032 3.690 -4.166 -4.766 -1.068 -4.962 -3.011 0.150 -5.130 -1.026 -3.589 ML 70 68 6 73 4 1 1 49 69 -3.758 -3.940 -0.507 -2.670 0.368 -0.385 -0.191 0.094 MR 71 68 6 73 4 1 1 49 68 -4.809 -3.838 -1.706 -0.766 0.368 -0.385 -0.191 0.094 D 72 68 6 73 4 0 0 48 67 -4.568 -4.250 -2.265 -0.520 IL 73 73 5 73 4 1 1 51 70 -1.686 -2.369 -1.117 -4.855 0.000 0.000 0.000 0.000 IR 74 74 6 74 3 1 1 50 69 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 14 ] 12 - U - - - ML 75 74 6 77 3 1 1 46 65 -8.213 -0.017 -6.867 -1.956 -1.872 -2.710 1.730 D 76 74 6 77 3 0 0 45 64 -6.174 -1.687 -0.566 IL 77 77 3 77 3 1 1 49 68 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 15 ] 13 - U - - - ML 78 77 3 80 3 1 1 45 64 -8.588 -0.016 -6.906 -1.067 -0.243 -1.827 1.261 D 79 77 3 80 3 0 0 44 63 -5.620 -0.734 -1.403 IL 80 80 3 80 3 1 1 46 65 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 16 ] - 43 - U - - MR 81 80 3 83 3 1 1 44 63 -8.588 -0.016 -6.906 -1.956 -1.872 -2.710 1.730 D 82 80 3 83 3 0 0 43 61 -6.390 -1.568 -0.620 IR 83 83 3 83 3 1 1 45 64 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 17 ] - 42 - U - - MR 84 83 3 86 5 1 1 43 62 -7.312 -0.033 -7.128 -7.340 -8.232 -1.956 -1.872 -2.710 1.730 D 85 83 3 86 5 0 0 42 61 -5.352 -0.707 -2.978 -4.409 -2.404 IR 86 86 3 86 5 1 1 43 62 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 18 ] 14 41 U A - - MP 87 86 3 91 6 2 2 42 61 -9.215 -9.154 -0.020 -7.931 -8.210 -8.605 -3.904 -3.884 -3.789 -0.191 -2.750 -4.362 1.570 -3.460 -3.805 0.003 -4.199 -1.921 3.022 -4.055 0.946 -2.682 ML 88 86 3 91 6 1 1 41 60 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 89 86 3 91 6 1 1 40 59 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 90 86 3 91 6 0 0 38 57 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 91 91 5 91 6 1 1 42 61 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 92 92 6 92 5 1 1 41 60 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 19 ] 15 40 G C - - MP 93 92 6 97 6 2 2 40 59 -9.215 -9.154 -0.020 -7.931 -8.210 -8.605 -5.229 -3.330 -5.390 -0.135 -5.915 -4.878 -1.158 -5.655 -4.631 3.736 -4.936 -1.052 -1.531 -4.783 -3.224 -4.259 ML 94 92 6 97 6 1 1 39 58 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 95 92 6 97 6 1 1 38 57 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 96 92 6 97 6 0 0 36 55 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 97 97 5 97 6 1 1 40 59 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 98 98 6 98 5 1 1 39 58 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 20 ] 16 39 A U - - MP 99 98 6 103 6 2 2 38 57 -9.215 -9.154 -0.020 -7.931 -8.210 -8.605 -4.259 -3.179 -4.233 3.566 -4.818 -5.936 -0.486 -4.243 -4.116 0.573 -4.687 -0.587 -0.901 -5.037 -2.425 -3.047 ML 100 98 6 103 6 1 1 37 56 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 101 98 6 103 6 1 1 36 55 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 102 98 6 103 6 0 0 34 53 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 103 103 5 103 6 1 1 38 57 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 104 104 6 104 5 1 1 37 56 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 21 ] 17 38 C G - - MP 105 104 6 109 6 2 2 36 55 -9.215 -9.154 -0.020 -7.931 -8.210 -8.605 -5.099 -5.051 -4.693 -1.242 -3.301 -5.032 3.690 -4.166 -4.766 -1.068 -4.962 -3.011 0.150 -5.130 -1.026 -3.589 ML 106 104 6 109 6 1 1 35 54 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 107 104 6 109 6 1 1 34 53 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 108 104 6 109 6 0 0 32 51 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 109 109 5 109 6 1 1 36 55 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 110 110 6 110 5 1 1 35 54 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 22 ] 18 37 U A - - MP 111 110 6 115 6 2 2 34 53 -9.215 -9.154 -0.020 -7.931 -8.210 -8.605 -4.808 -4.643 -4.575 -0.900 -3.394 -5.080 0.942 -4.129 -4.575 -0.722 -4.917 -2.523 3.558 -4.931 -1.056 -3.327 ML 112 110 6 115 6 1 1 33 52 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 113 110 6 115 6 1 1 32 51 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 114 110 6 115 6 0 0 30 49 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 115 115 5 115 6 1 1 34 53 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 116 116 6 116 5 1 1 33 52 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 23 ] 19 36 G C - - MP 117 116 6 121 6 2 2 32 51 -9.215 -9.154 -0.020 -7.931 -8.210 -8.605 -5.229 -3.330 -5.390 -0.135 -5.915 -4.878 -1.158 -5.655 -4.631 3.736 -4.936 -1.052 -1.531 -4.783 -3.224 -4.259 ML 118 116 6 121 6 1 1 31 50 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 119 116 6 121 6 1 1 31 49 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 120 116 6 121 6 0 0 28 47 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 121 121 5 121 6 1 1 32 51 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 122 122 6 122 5 1 1 31 50 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 24 ] 20 35 A U - - MP 123 122 6 127 6 2 2 30 49 -9.215 -9.154 -0.020 -7.931 -8.210 -8.605 -3.695 -2.655 -3.800 3.132 -4.568 -5.325 -0.301 -3.959 -3.633 1.216 -4.209 1.262 -0.529 -4.353 -2.187 -2.604 ML 124 122 6 127 6 1 1 29 48 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 125 122 6 127 6 1 1 29 48 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 126 122 6 127 6 0 0 27 46 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 127 127 5 127 6 1 1 30 49 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 128 128 6 128 5 1 1 29 48 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 25 ] 21 34 U A - - MP 129 128 6 133 6 2 2 28 47 -9.215 -9.154 -0.020 -7.931 -8.210 -8.605 -4.808 -4.643 -4.575 -0.900 -3.394 -5.080 0.942 -4.129 -4.575 -0.722 -4.917 -2.523 3.558 -4.931 -1.056 -3.327 ML 130 128 6 133 6 1 1 28 47 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 131 128 6 133 6 1 1 27 46 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 132 128 6 133 6 0 0 26 45 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 133 133 5 133 6 1 1 28 47 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 134 134 6 134 5 1 1 28 47 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 26 ] 22 33 G U - - MP 135 134 6 139 4 2 2 26 45 -7.214 -7.421 -0.044 -5.835 -3.937 -2.626 -4.125 0.914 -5.097 -5.853 -0.650 -4.113 -3.718 0.920 -4.261 3.354 -0.996 -4.967 -2.589 -2.770 ML 136 134 6 139 4 1 1 27 46 -3.758 -3.940 -0.507 -2.670 0.368 -0.385 -0.191 0.094 MR 137 134 6 139 4 1 1 26 45 -4.809 -3.838 -1.706 -0.766 0.368 -0.385 -0.191 0.094 D 138 134 6 139 4 0 0 25 44 -4.568 -4.250 -2.265 -0.520 IL 139 139 5 139 4 1 1 28 47 -1.686 -2.369 -1.117 -4.855 0.000 0.000 0.000 0.000 IR 140 140 6 140 3 1 1 27 46 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 27 ] 23 - U - - - ML 141 140 6 143 3 1 1 23 42 -8.213 -0.017 -6.867 -1.956 -1.872 -2.710 1.730 D 142 140 6 143 3 0 0 22 41 -6.174 -1.687 -0.566 IL 143 143 3 143 3 1 1 26 45 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 28 ] 24 - g - - - ML 144 143 3 146 3 1 1 22 41 -8.213 -0.017 -6.867 -0.554 -1.209 0.742 0.280 D 145 143 3 146 3 0 0 21 40 -6.174 -1.687 -0.566 IL 146 146 3 146 3 1 1 25 44 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 29 ] 25 - g - - - ML 147 146 3 149 3 1 1 21 40 -8.213 -0.017 -6.867 0.566 -1.676 0.798 -1.095 D 148 146 3 149 3 0 0 20 39 -6.174 -1.687 -0.566 IL 149 149 3 149 3 1 1 24 43 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 30 ] 26 - U - - - ML 150 149 3 152 3 1 1 20 38 -8.213 -0.017 -6.867 -1.956 -1.872 -2.710 1.730 D 151 149 3 152 3 0 0 19 38 -6.174 -1.687 -0.566 IL 152 152 3 152 3 1 1 23 42 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 31 ] 27 - U - - - ML 153 152 3 155 3 1 1 19 37 -8.213 -0.017 -6.867 -0.151 -1.058 -1.469 1.175 D 154 152 3 155 3 0 0 18 37 -6.174 -1.687 -0.566 IL 155 155 3 155 3 1 1 22 41 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 32 ] 28 - A - - - ML 156 155 3 158 3 1 1 17 36 -8.213 -0.017 -6.867 1.808 -2.875 -2.458 -2.469 D 157 155 3 158 3 0 0 17 36 -6.174 -1.687 -0.566 IL 158 158 3 158 3 1 1 21 39 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 33 ] 29 - u - - - ML 159 158 3 161 3 1 1 16 35 -8.213 -0.017 -6.867 -0.920 0.362 -1.711 0.911 D 160 158 3 161 3 0 0 16 34 -6.174 -1.687 -0.566 IL 161 161 3 161 3 1 1 20 38 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 34 ] 30 - G - - - ML 162 161 3 164 3 1 1 15 33 -8.213 -0.017 -6.867 -0.069 -1.976 1.271 -1.402 D 163 161 3 164 3 0 0 15 33 -6.174 -1.687 -0.566 IL 164 164 3 164 3 1 1 19 37 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 35 ] 31 - u - - - ML 165 164 3 167 3 1 1 13 31 -8.213 -0.017 -6.867 -0.460 -0.313 -0.468 0.803 D 166 164 3 167 3 0 0 13 32 -6.174 -1.687 -0.566 IL 167 167 3 167 3 1 1 18 36 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 36 ] 32 - U - - - ML 168 167 3 170 2 1 1 1 1 * 0.000 -1.956 -1.872 -2.710 1.730 D 169 167 3 170 2 0 0 0 0 * 0.000 IL 170 170 3 170 2 1 1 13 28 -1.823 -0.479 0.000 0.000 0.000 0.000 [ END 37 ] - - - - - - E 171 170 3 -1 0 0 0 0 0 // HMMER3/f [3.4 | Aug 2023] NAME mir-7927 ACC RF04048 DESC mir-7927 microRNA precursor family LENG 56 MAXL 135 ALPH RNA RF no MM no CONS yes CS yes MAP yes DATE Wed Jul 10 09:59:24 2024 COM [1] /hps/software/users/agb/rfam/bin/cmbuild -F CM SEED COM [2] /hps/software/users/agb/rfam/bin/cmcalibrate --cpu 8 /nfs/production/agb/rfam/15/rescan/families/RF04048/CM NSEQ 5 EFFN 3.618164 CKSUM 1197498442 STATS LOCAL MSV -8.0478 0.71942 STATS LOCAL VITERBI -8.4102 0.71942 STATS LOCAL FORWARD -3.6684 0.71942 HMM A C G U m->m m->i m->d i->m i->i d->m d->d COMPO 1.65935 1.68137 1.31787 1.03307 1.38629 1.38629 1.38629 1.38629 0.03388 4.09496 4.09496 1.46634 0.26236 0.00000 * 1 2.25888 0.53435 2.13953 1.65145 1 C - - < 1.38629 1.38629 1.38629 1.38629 0.03388 4.09496 4.09496 1.46634 0.26236 1.09861 0.40547 2 2.13476 3.30937 0.22314 3.09690 2 G - - < 1.38629 1.38629 1.38629 1.38629 0.03388 4.09496 4.09496 1.46634 0.26236 1.09861 0.40547 3 2.25351 3.11280 0.22515 2.95464 3 G - - < 1.38629 1.38629 1.38629 1.38629 0.03388 4.09496 4.09496 1.46634 0.26236 1.09861 0.40547 4 1.32328 3.42410 0.41653 3.17416 4 G - - < 1.38629 1.38629 1.38629 1.38629 0.03388 4.09496 4.09496 1.46634 0.26236 1.09861 0.40547 5 2.45496 3.06932 0.20356 2.95929 5 G - - < 1.38629 1.38629 1.38629 1.38629 0.03388 4.09496 4.09496 1.46634 0.26236 1.09861 0.40547 6 3.75079 0.13776 3.59034 2.55619 6 C - - < 1.38629 1.38629 1.38629 1.38629 0.03388 4.09496 4.09496 1.46634 0.26236 1.09861 0.40547 7 2.18000 3.40832 0.20536 3.23136 7 G - - < 1.38629 1.38629 1.38629 1.38629 0.03388 4.09496 4.09496 1.46634 0.26236 1.09861 0.40547 8 3.33870 1.23589 3.17700 0.45850 8 U - - < 1.38629 1.38629 1.38629 1.38629 0.03388 4.09496 4.09496 1.46634 0.26236 1.09861 0.40547 9 3.61795 2.41487 3.43828 0.16056 9 U - - < 1.38629 1.38629 1.38629 1.38629 0.03388 4.09496 4.09496 1.46634 0.26236 1.09861 0.40547 10 3.61720 2.41479 3.43788 0.16061 10 U - - < 1.38629 1.38629 1.38629 1.38629 0.03388 4.09496 4.09496 1.46634 0.26236 1.09861 0.40547 11 3.74561 0.13807 3.58751 2.55520 11 C - - < 1.38629 1.38629 1.38629 1.38629 0.03388 4.09496 4.09496 1.46634 0.26236 1.09861 0.40547 12 3.11684 2.99774 3.65004 0.12805 12 U - - - 1.38629 1.38629 1.38629 1.38629 0.03388 4.09496 4.09496 1.46634 0.26236 1.09861 0.40547 13 2.34262 1.56861 2.87794 0.44732 13 U - - - 1.38629 1.38629 1.38629 1.38629 0.03388 4.09496 4.09496 1.46634 0.26236 1.09861 0.40547 14 2.94201 1.75105 2.73162 0.34456 14 U - - < 1.38629 1.38629 1.38629 1.38629 0.03388 4.09496 4.09496 1.46634 0.26236 1.09861 0.40547 15 2.93554 3.76290 0.10642 3.70364 15 G - - < 1.38629 1.38629 1.38629 1.38629 0.03388 4.09496 4.09496 1.46634 0.26236 1.09861 0.40547 16 0.17968 3.45248 2.32526 3.35144 16 A - - < 1.38629 1.38629 1.38629 1.38629 0.03388 4.09496 4.09496 1.46634 0.26236 1.09861 0.40547 17 3.75678 0.13739 3.59360 2.55733 17 C - - < 1.38629 1.38629 1.38629 1.38629 0.03388 4.09496 4.09496 1.46634 0.26236 1.09861 0.40547 18 3.62428 2.41552 3.44162 0.16017 18 U - - < 1.38629 1.38629 1.38629 1.38629 0.03388 4.09496 4.09496 1.46634 0.26236 1.09861 0.40547 19 2.93203 3.75789 0.10694 3.69685 19 G - - < 1.38629 1.38629 1.38629 1.38629 0.03388 4.09496 4.09496 1.46634 0.26236 1.09861 0.40547 20 0.45863 3.25283 1.27137 3.02130 20 A - - < 1.38629 1.38629 1.38629 1.38629 0.03388 4.09496 4.09496 1.46634 0.26236 1.09861 0.40547 21 3.61972 2.41505 3.43921 0.16045 21 U - - < 1.38629 1.38629 1.38629 1.38629 0.03388 4.09496 4.09496 1.46634 0.26236 1.09861 0.40547 22 2.17979 3.40779 0.20544 3.23072 22 G - - < 1.38629 1.38629 1.38629 1.38629 0.03388 4.09496 4.09496 1.46634 0.26236 1.09861 0.40547 23 3.11684 2.99774 3.65004 0.12805 23 U - - _ 1.38629 1.38629 1.38629 1.38629 0.03388 4.09496 4.09496 1.46634 0.26236 1.09861 0.40547 24 1.90954 2.37506 0.78781 1.19071 24 g - - _ 1.38629 1.38629 1.38629 1.38629 0.03388 4.09496 4.09496 1.46634 0.26236 1.09861 0.40547 25 0.96910 2.76224 0.76722 2.37380 25 g - - _ 1.38629 1.38629 1.38629 1.38629 0.03388 4.09496 4.09496 1.46634 0.26236 1.09861 0.40547 26 3.11684 2.99774 3.65004 0.12805 26 U - - _ 1.38629 1.38629 1.38629 1.38629 0.03388 4.09496 4.09496 1.46634 0.26236 1.09861 0.40547 27 1.53499 2.27696 2.57535 0.50117 27 U - - _ 1.38629 1.38629 1.38629 1.38629 0.03388 4.09496 4.09496 1.46634 0.26236 1.09861 0.40547 28 0.08821 3.76821 3.44429 3.52648 28 A - - _ 1.38629 1.38629 1.38629 1.38629 0.03388 4.09496 4.09496 1.46634 0.26236 1.09861 0.40547 29 2.21183 1.08351 2.77645 0.71369 29 u - - _ 1.38629 1.38629 1.38629 1.38629 0.03388 4.09496 4.09496 1.46634 0.26236 1.09861 0.40547 30 1.47831 2.98953 0.43373 2.60934 30 G - - _ 1.38629 1.38629 1.38629 1.38629 0.03388 4.09496 4.09496 1.46634 0.26236 1.09861 0.40547 31 1.79919 1.60960 1.70616 0.79178 31 u - - _ 1.38629 1.38629 1.38629 1.38629 0.03388 4.09496 4.09496 1.46634 0.26236 1.09861 0.40547 32 3.11684 2.99774 3.65004 0.12805 32 U - - _ 1.38629 1.38629 1.38629 1.38629 0.03388 4.09496 4.09496 1.46634 0.26236 1.09861 0.40547 33 3.42491 2.33229 3.19473 0.18706 33 U - - > 1.38629 1.38629 1.38629 1.38629 0.03388 4.09496 4.09496 1.46634 0.26236 1.09861 0.40547 34 0.18213 3.63181 2.25031 3.36188 34 A - - > 1.38629 1.38629 1.38629 1.38629 0.03388 4.09496 4.09496 1.46634 0.26236 1.09861 0.40547 35 3.22250 2.12096 3.04039 0.23267 35 U - - > 1.38629 1.38629 1.38629 1.38629 0.03388 4.09496 4.09496 1.46634 0.26236 1.09861 0.40547 36 3.86715 0.12864 3.60603 2.62234 36 C - - > 1.38629 1.38629 1.38629 1.38629 0.03388 4.09496 4.09496 1.46634 0.26236 1.09861 0.40547 37 0.18176 3.63559 2.25096 3.36593 37 A - - > 1.38629 1.38629 1.38629 1.38629 0.03388 4.09496 4.09496 1.46634 0.26236 1.09861 0.40547 38 2.83987 3.76049 0.11776 3.52719 38 G - - > 1.38629 1.38629 1.38629 1.38629 0.03388 4.09496 4.09496 1.46634 0.26236 1.09861 0.40547 39 3.57470 2.68113 3.26099 0.14486 39 U - - > 1.38629 1.38629 1.38629 1.38629 0.03388 4.09496 4.09496 1.46634 0.26236 1.09861 0.40547 40 3.89126 0.12735 3.61777 2.62677 40 C - - > 1.38629 1.38629 1.38629 1.38629 0.03388 4.09496 4.09496 1.46634 0.26236 1.09861 0.40547 41 0.54467 2.90226 1.20851 2.71165 41 A - - > 1.38629 1.38629 1.38629 1.38629 0.03388 4.09496 4.09496 1.46634 0.26236 1.09861 0.40547 42 3.11684 2.99774 3.65004 0.12805 42 U - - - 1.38629 1.38629 1.38629 1.38629 0.03388 4.09496 4.09496 1.46634 0.26236 1.09861 0.40547 43 3.11684 2.99774 3.65004 0.12805 43 U - - - 1.38629 1.38629 1.38629 1.38629 0.03388 4.09496 4.09496 1.46634 0.26236 1.09861 0.40547 44 2.83404 3.75120 0.11874 3.51681 44 G - - > 1.38629 1.38629 1.38629 1.38629 0.03388 4.09496 4.09496 1.46634 0.26236 1.09861 0.40547 45 0.18230 3.63003 2.25000 3.35996 45 A - - > 1.38629 1.38629 1.38629 1.38629 0.03388 4.09496 4.09496 1.46634 0.26236 1.09861 0.40547 46 0.18225 3.63058 2.25010 3.36054 46 A - - > 1.38629 1.38629 1.38629 1.38629 0.03388 4.09496 4.09496 1.46634 0.26236 1.09861 0.40547 47 2.33825 3.32766 0.19562 3.09446 47 G - - > 1.38629 1.38629 1.38629 1.38629 0.03388 4.09496 4.09496 1.46634 0.26236 1.09861 0.40547 48 3.42643 2.33245 3.19547 0.18694 48 U - - > 1.38629 1.38629 1.38629 1.38629 0.03388 4.09496 4.09496 1.46634 0.26236 1.09861 0.40547 49 2.83663 3.75532 0.11830 3.52142 49 G - - > 1.38629 1.38629 1.38629 1.38629 0.03388 4.09496 4.09496 1.46634 0.26236 1.09861 0.40547 50 2.09910 0.34600 2.89082 2.16812 50 C - - > 1.38629 1.38629 1.38629 1.38629 0.03388 4.09496 4.09496 1.46634 0.26236 1.09861 0.40547 51 3.36744 2.19625 3.20684 0.20602 51 U - - > 1.38629 1.38629 1.38629 1.38629 0.03388 4.09496 4.09496 1.46634 0.26236 1.09861 0.40547 52 3.18627 0.49775 2.92595 1.21348 52 C - - > 1.38629 1.38629 1.38629 1.38629 0.03388 4.09496 4.09496 1.46634 0.26236 1.09861 0.40547 53 3.30811 1.29963 3.10530 0.43700 53 U - - > 1.38629 1.38629 1.38629 1.38629 0.03388 4.09496 4.09496 1.46634 0.26236 1.09861 0.40547 54 1.89755 1.67229 0.77978 1.59091 54 g - - > 1.38629 1.38629 1.38629 1.38629 0.03388 4.09496 4.09496 1.46634 0.26236 1.09861 0.40547 55 1.03306 2.78238 0.71139 2.39436 55 g - - : 1.38629 1.38629 1.38629 1.38629 0.03388 4.09496 4.09496 1.46634 0.26236 1.09861 0.40547 56 3.11684 2.99774 3.65004 0.12805 56 U - - : 1.38629 1.38629 1.38629 1.38629 0.01708 4.07817 * 1.46634 0.26236 0.00000 * //