INFERNAL1/a [1.1.5 | Sep 2023] NAME mir-7910 ACC RF04035 DESC mir-7910 microRNA precursor family STATES 187 NODES 41 CLEN 61 W 76 ALPH RNA RF no CONS yes MAP yes DATE Thu Jul 11 01:04:54 2024 COM [1] /hps/software/users/agb/rfam/bin/cmbuild -F CM SEED COM [2] /hps/software/users/agb/rfam/bin/cmcalibrate --cpu 8 /nfs/production/agb/rfam/15/rescan/families/RF04035/CM PBEGIN 0.05 PEND 0.05 WBETA 1e-07 QDBBETA1 1e-07 QDBBETA2 1e-15 N2OMEGA 1.52588e-05 N3OMEGA 1.52588e-05 ELSELF -0.08926734 NSEQ 2 EFFN 1.863281 CKSUM 2641965190 NULL 0.000 0.000 0.000 0.000 GA 83.00 TC 86.60 NC 50.50 EFP7GF -4.5145 0.72974 ECMLC 0.65027 -4.36221 4.67087 1600000 426778 0.002812 ECMGC 0.41422 -16.56291 -2.10246 1600000 159726 0.002504 ECMLI 0.58419 -3.84453 5.72166 1600000 320797 0.003741 ECMGI 0.47464 -10.53680 0.95792 1600000 93650 0.004271 CM [ ROOT 0 ] - - - - - - S 0 -1 0 1 4 1 1 76 96 -6.839 -8.085 -0.082 -4.538 IL 1 1 2 1 4 1 9 78 97 -2.817 -4.319 -0.613 -2.698 0.000 0.000 0.000 0.000 IR 2 2 3 2 3 1 11 78 98 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 1 ] - 61 - U - - MR 3 2 3 5 5 1 13 76 96 -7.071 -0.040 -6.887 -7.099 -7.991 -1.439 -1.444 -2.170 1.605 D 4 2 3 5 5 0 5 75 95 -5.352 -0.707 -2.978 -4.409 -2.404 IR 5 5 3 5 5 1 9 77 96 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 2 ] 1 60 U A - - MP 6 5 3 10 6 2 14 75 95 -9.097 -9.036 -0.021 -7.813 -8.093 -8.488 -4.141 -3.965 -3.985 -0.263 -2.937 -4.553 1.390 -3.630 -3.990 -0.002 -4.366 -1.865 3.304 -4.294 -0.615 -2.819 ML 7 5 3 10 6 1 7 74 93 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 8 5 3 10 6 1 7 74 93 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 9 5 3 10 6 0 3 71 91 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 10 10 5 10 6 1 8 75 95 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 11 11 6 11 5 1 8 75 94 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 3 ] 2 59 U A - - MP 12 11 6 16 6 2 13 73 93 -9.097 -9.036 -0.021 -7.813 -8.093 -8.488 -4.141 -3.965 -3.985 -0.263 -2.937 -4.553 1.390 -3.630 -3.990 -0.002 -4.366 -1.865 3.304 -4.294 -0.615 -2.819 ML 13 11 6 16 6 1 6 72 91 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 14 11 6 16 6 1 6 72 91 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 15 11 6 16 6 0 3 69 89 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 16 16 5 16 6 1 8 73 93 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 17 17 6 17 5 1 8 73 92 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 4 ] 3 58 U A - - MP 18 17 6 22 6 2 13 71 91 -9.097 -9.036 -0.021 -7.813 -8.093 -8.488 -4.141 -3.965 -3.985 -0.263 -2.937 -4.553 1.390 -3.630 -3.990 -0.002 -4.366 -1.865 3.304 -4.294 -0.615 -2.819 ML 19 17 6 22 6 1 6 70 89 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 20 17 6 22 6 1 6 70 89 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 21 17 6 22 6 0 2 67 87 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 22 22 5 22 6 1 7 71 91 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 23 23 6 23 5 1 8 71 90 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 5 ] 4 57 G C - - MP 24 23 6 28 6 2 12 69 89 -9.097 -9.036 -0.021 -7.813 -8.093 -8.488 -4.696 -3.072 -4.791 0.231 -5.168 -4.676 -0.544 -5.030 -4.298 3.627 -4.638 -0.769 -0.931 -4.438 -2.579 -3.668 ML 25 23 6 28 6 1 6 68 87 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 26 23 6 28 6 1 6 68 87 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 27 23 6 28 6 0 2 65 85 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 28 28 5 28 6 1 7 69 89 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 29 29 6 29 5 1 7 69 88 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 6 ] 5 56 A U - - MP 30 29 6 34 6 2 11 67 87 -9.097 -9.036 -0.021 -7.813 -8.093 -8.488 -3.752 -2.794 -3.774 3.306 -4.093 -5.152 0.204 -3.819 -3.667 1.120 -4.213 -0.276 -0.213 -4.346 -1.737 -2.610 ML 31 29 6 34 6 1 6 66 85 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 32 29 6 34 6 1 5 66 85 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 33 29 6 34 6 0 2 63 83 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 34 34 5 34 6 1 7 67 87 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 35 35 6 35 5 1 7 67 86 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 7 ] 6 55 A U - - MP 36 35 6 40 6 2 11 65 85 -9.097 -9.036 -0.021 -7.813 -8.093 -8.488 -3.752 -2.794 -3.774 3.306 -4.093 -5.152 0.204 -3.819 -3.667 1.120 -4.213 -0.276 -0.213 -4.346 -1.737 -2.610 ML 37 35 6 40 6 1 5 64 83 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 38 35 6 40 6 1 5 64 83 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 39 35 6 40 6 0 2 61 81 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 40 40 5 40 6 1 6 65 85 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 41 41 6 41 5 1 6 65 84 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 8 ] 7 54 A U - - MP 42 41 6 46 6 2 9 63 83 -9.097 -9.036 -0.021 -7.813 -8.093 -8.488 -3.752 -2.794 -3.774 3.306 -4.093 -5.152 0.204 -3.819 -3.667 1.120 -4.213 -0.276 -0.213 -4.346 -1.737 -2.610 ML 43 41 6 46 6 1 5 62 82 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 44 41 6 46 6 1 4 62 81 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 45 41 6 46 6 0 1 60 79 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 46 46 5 46 6 1 6 63 83 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 47 47 6 47 5 1 6 63 82 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 9 ] 8 53 U A - - MP 48 47 6 52 6 2 7 61 81 -9.097 -9.036 -0.021 -7.813 -8.093 -8.488 -4.141 -3.965 -3.985 -0.263 -2.937 -4.553 1.390 -3.630 -3.990 -0.002 -4.366 -1.865 3.304 -4.294 -0.615 -2.819 ML 49 47 6 52 6 1 4 60 80 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 50 47 6 52 6 1 3 60 80 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 51 47 6 52 6 0 1 58 78 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 52 52 5 52 6 1 5 61 81 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 53 53 6 53 5 1 5 61 80 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 10 ] 9 52 G C - - MP 54 53 6 58 4 2 5 59 79 -6.921 -7.128 -0.054 -5.542 -4.696 -3.072 -4.791 0.231 -5.168 -4.676 -0.544 -5.030 -4.298 3.627 -4.638 -0.769 -0.931 -4.438 -2.579 -3.668 ML 55 53 6 58 4 1 4 60 79 -3.758 -3.940 -0.507 -2.670 0.368 -0.385 -0.191 0.094 MR 56 53 6 58 4 1 2 59 79 -4.809 -3.838 -1.706 -0.766 0.368 -0.385 -0.191 0.094 D 57 53 6 58 4 0 1 58 78 -4.568 -4.250 -2.265 -0.520 IL 58 58 5 58 4 1 4 61 81 -1.686 -2.369 -1.117 -4.855 0.000 0.000 0.000 0.000 IR 59 59 6 59 3 1 4 60 80 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 11 ] 10 - G - - - ML 60 59 6 62 3 1 3 57 76 -7.939 -0.021 -6.593 -1.526 -2.738 1.711 -2.125 D 61 59 6 62 3 0 1 55 75 -6.174 -1.687 -0.566 IL 62 62 3 62 3 1 3 59 79 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 12 ] 11 - u - - - ML 63 62 3 65 3 1 2 56 75 -7.939 -0.021 -6.593 -0.685 0.453 -1.461 0.719 D 64 62 3 65 3 0 0 54 74 -6.174 -1.687 -0.566 IL 65 65 3 65 3 1 2 58 78 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 13 ] 12 - u - - - ML 66 65 3 68 3 1 1 55 74 -8.331 -0.408 -2.039 -0.355 -0.927 0.328 0.523 D 67 65 3 68 3 0 0 54 73 -5.620 -0.734 -1.403 IL 68 68 3 68 3 1 3 56 75 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 14 ] - 51 - U - - MR 69 68 3 71 3 1 4 54 73 -7.948 -0.025 -6.265 -0.727 -0.871 -1.406 1.305 D 70 68 3 71 3 0 0 52 71 -7.933 -3.110 -0.184 IR 71 71 3 71 3 1 2 55 74 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 15 ] - 50 - U - - MR 72 71 3 74 3 1 3 53 72 -7.948 -0.025 -6.265 -0.727 -0.871 -1.406 1.305 D 73 71 3 74 3 0 0 51 70 -7.933 -3.110 -0.184 IR 74 74 3 74 3 1 2 54 73 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 16 ] - 49 - C - - MR 75 74 3 77 5 1 2 52 71 -6.717 -0.051 -6.533 -6.745 -7.636 -0.760 1.199 -1.527 -0.382 D 76 74 3 77 5 0 0 51 70 -6.403 -0.299 -4.030 -5.461 -3.455 IR 77 77 3 77 5 1 1 52 72 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 17 ] 13 48 C G - - MP 78 77 3 82 6 2 4 51 70 -9.097 -9.036 -0.021 -7.813 -8.093 -8.488 -4.503 -4.405 -4.201 -0.641 -2.929 -4.618 3.536 -3.734 -4.248 -0.394 -4.514 -2.351 0.590 -4.575 -0.634 -3.090 ML 79 77 3 82 6 1 1 50 69 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 80 77 3 82 6 1 1 50 69 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 81 77 3 82 6 0 0 47 67 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 82 82 5 82 6 1 1 51 70 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 83 83 6 83 5 1 1 50 70 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 18 ] 14 47 A U - - MP 84 83 6 88 6 2 3 49 68 -9.097 -9.036 -0.021 -7.813 -8.093 -8.488 -3.752 -2.794 -3.774 3.306 -4.093 -5.152 0.204 -3.819 -3.667 1.120 -4.213 -0.276 -0.213 -4.346 -1.737 -2.610 ML 85 83 6 88 6 1 1 48 68 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 86 83 6 88 6 1 1 48 67 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 87 83 6 88 6 0 0 46 66 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 88 88 5 88 6 1 1 49 68 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 89 89 6 89 5 1 1 48 68 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 19 ] 15 46 G U - - MP 90 89 6 94 4 2 2 47 66 -6.921 -7.128 -0.054 -5.542 -3.585 -2.367 -3.749 1.153 -4.440 -5.164 -0.052 -3.777 -3.420 1.400 -3.939 3.050 -0.411 -4.379 -1.994 -2.456 ML 91 89 6 94 4 1 1 47 67 -3.758 -3.940 -0.507 -2.670 0.368 -0.385 -0.191 0.094 MR 92 89 6 94 4 1 1 47 66 -4.809 -3.838 -1.706 -0.766 0.368 -0.385 -0.191 0.094 D 93 89 6 94 4 0 0 46 65 -4.568 -4.250 -2.265 -0.520 IL 94 94 5 94 4 1 1 49 68 -1.686 -2.369 -1.117 -4.855 0.000 0.000 0.000 0.000 IR 95 95 6 95 3 1 1 48 67 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 20 ] 16 - u - - - ML 96 95 6 98 3 1 1 44 64 -8.331 -0.019 -6.649 -0.685 0.453 -1.461 0.719 D 97 95 6 98 3 0 0 43 62 -5.620 -0.734 -1.403 IL 98 98 3 98 3 1 1 45 64 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 21 ] - 45 - C - - MR 99 98 3 101 5 1 1 43 63 -7.071 -0.040 -6.887 -7.099 -7.991 -1.680 1.607 -2.502 -1.106 D 100 98 3 101 5 0 0 42 61 -5.352 -0.707 -2.978 -4.409 -2.404 IR 101 101 3 101 5 1 1 44 63 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 22 ] 17 44 u a - - MP 102 101 3 106 6 2 2 42 62 -9.097 -9.036 -0.021 -7.813 -8.093 -8.488 -2.730 -2.736 -2.789 0.531 -2.277 1.192 1.693 -2.822 -2.844 0.850 -3.314 -1.040 2.145 -2.966 -0.159 -1.888 ML 103 101 3 106 6 1 1 41 60 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 104 101 3 106 6 1 1 41 60 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 105 101 3 106 6 0 0 38 58 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 106 106 5 106 6 1 1 42 61 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 107 107 6 107 5 1 1 42 61 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 23 ] 18 43 C G - - MP 108 107 6 112 6 2 2 40 60 -9.097 -9.036 -0.021 -7.813 -8.093 -8.488 -4.503 -4.405 -4.201 -0.641 -2.929 -4.618 3.536 -3.734 -4.248 -0.394 -4.514 -2.351 0.590 -4.575 -0.634 -3.090 ML 109 107 6 112 6 1 1 39 58 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 110 107 6 112 6 1 1 39 58 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 111 107 6 112 6 0 0 37 56 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 112 112 5 112 6 1 1 40 59 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 113 113 6 113 5 1 1 40 59 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 24 ] 19 42 C G - - MP 114 113 6 118 6 2 2 38 58 -9.097 -9.036 -0.021 -7.813 -8.093 -8.488 -4.503 -4.405 -4.201 -0.641 -2.929 -4.618 3.536 -3.734 -4.248 -0.394 -4.514 -2.351 0.590 -4.575 -0.634 -3.090 ML 115 113 6 118 6 1 1 37 56 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 116 113 6 118 6 1 1 37 56 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 117 113 6 118 6 0 0 35 54 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 118 118 5 118 6 1 1 38 57 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 119 119 6 119 5 1 1 38 57 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 25 ] 20 41 U A - - MP 120 119 6 124 6 2 2 36 56 -9.097 -9.036 -0.021 -7.813 -8.093 -8.488 -4.141 -3.965 -3.985 -0.263 -2.937 -4.553 1.390 -3.630 -3.990 -0.002 -4.366 -1.865 3.304 -4.294 -0.615 -2.819 ML 121 119 6 124 6 1 1 36 55 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 122 119 6 124 6 1 1 36 55 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 123 119 6 124 6 0 0 34 53 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 124 124 5 124 6 1 1 36 55 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 125 125 6 125 5 1 1 36 55 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 26 ] 21 40 A U - - MP 126 125 6 130 4 2 2 34 54 -6.921 -7.128 -0.054 -5.542 -3.752 -2.794 -3.774 3.306 -4.093 -5.152 0.204 -3.819 -3.667 1.120 -4.213 -0.276 -0.213 -4.346 -1.737 -2.610 ML 127 125 6 130 4 1 1 35 54 -3.758 -3.940 -0.507 -2.670 0.368 -0.385 -0.191 0.094 MR 128 125 6 130 4 1 1 35 54 -4.809 -3.838 -1.706 -0.766 0.368 -0.385 -0.191 0.094 D 129 125 6 130 4 0 0 34 53 -4.568 -4.250 -2.265 -0.520 IL 130 130 5 130 4 1 1 36 56 -1.686 -2.369 -1.117 -4.855 0.000 0.000 0.000 0.000 IR 131 131 6 131 3 1 1 35 55 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 27 ] 22 - U - - - ML 132 131 6 134 3 1 1 32 51 -8.331 -0.019 -6.649 -1.439 -1.444 -2.170 1.605 D 133 131 6 134 3 0 0 31 49 -5.620 -0.734 -1.403 IL 134 134 3 134 3 1 1 33 52 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 28 ] - 39 - U - - MR 135 134 3 137 5 1 1 31 50 -7.071 -0.040 -6.887 -7.099 -7.991 -1.439 -1.444 -2.170 1.605 D 136 134 3 137 5 0 0 29 48 -5.352 -0.707 -2.978 -4.409 -2.404 IR 137 137 3 137 5 1 1 31 50 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 29 ] 23 38 U A - - MP 138 137 3 142 6 2 2 30 49 -9.097 -9.036 -0.021 -7.813 -8.093 -8.488 -4.141 -3.965 -3.985 -0.263 -2.937 -4.553 1.390 -3.630 -3.990 -0.002 -4.366 -1.865 3.304 -4.294 -0.615 -2.819 ML 139 137 3 142 6 1 1 28 47 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 140 137 3 142 6 1 1 28 47 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 141 137 3 142 6 0 0 26 45 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 142 142 5 142 6 1 1 29 48 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 143 143 6 143 5 1 1 29 48 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 30 ] 24 37 C G - - MP 144 143 6 148 6 2 2 28 47 -9.097 -9.036 -0.021 -7.813 -8.093 -8.488 -4.503 -4.405 -4.201 -0.641 -2.929 -4.618 3.536 -3.734 -4.248 -0.394 -4.514 -2.351 0.590 -4.575 -0.634 -3.090 ML 145 143 6 148 6 1 1 26 45 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 146 143 6 148 6 1 1 26 45 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 147 143 6 148 6 0 0 24 43 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 148 148 5 148 6 1 1 27 46 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 149 149 6 149 5 1 1 27 46 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 31 ] 25 36 A U - - MP 150 149 6 154 6 2 2 26 45 -9.097 -9.036 -0.021 -7.813 -8.093 -8.488 -3.752 -2.794 -3.774 3.306 -4.093 -5.152 0.204 -3.819 -3.667 1.120 -4.213 -0.276 -0.213 -4.346 -1.737 -2.610 ML 151 149 6 154 6 1 1 25 43 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 152 149 6 154 6 1 1 24 43 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 153 149 6 154 6 0 0 22 41 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 154 154 5 154 6 1 1 26 44 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 155 155 6 155 5 1 1 25 44 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 32 ] 26 35 A U - - MP 156 155 6 160 6 2 2 24 43 -9.097 -9.036 -0.021 -7.813 -8.093 -8.488 -3.752 -2.794 -3.774 3.306 -4.093 -5.152 0.204 -3.819 -3.667 1.120 -4.213 -0.276 -0.213 -4.346 -1.737 -2.610 ML 157 155 6 160 6 1 1 23 42 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 158 155 6 160 6 1 1 23 42 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 159 155 6 160 6 0 0 21 40 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 160 160 5 160 6 1 1 24 43 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 161 161 6 161 5 1 1 23 42 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 33 ] 27 34 g u - - MP 162 161 6 166 4 2 2 22 41 -6.921 -7.128 -0.054 -5.542 -2.738 -2.147 -2.921 1.103 -2.958 -3.791 0.958 1.355 -2.805 1.318 -3.289 1.777 0.622 -3.154 -0.843 -1.901 ML 163 161 6 166 4 1 1 23 42 -3.758 -3.940 -0.507 -2.670 0.368 -0.385 -0.191 0.094 MR 164 161 6 166 4 1 1 22 41 -4.809 -3.838 -1.706 -0.766 0.368 -0.385 -0.191 0.094 D 165 161 6 166 4 0 0 21 40 -4.568 -4.250 -2.265 -0.520 IL 166 166 5 166 4 1 1 24 43 -1.686 -2.369 -1.117 -4.855 0.000 0.000 0.000 0.000 IR 167 167 6 167 3 1 1 23 42 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 34 ] 28 - G - - - ML 168 167 6 170 3 1 1 19 37 -7.939 -0.443 -1.941 -1.526 -2.738 1.711 -2.125 D 169 167 6 170 3 0 0 18 37 -6.174 -1.687 -0.566 IL 170 170 3 170 3 1 1 22 41 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 35 ] 29 - C - - - ML 171 170 3 173 3 1 1 18 36 -7.524 -0.028 -6.178 -0.760 1.199 -1.527 -0.382 D 172 170 3 173 3 0 0 17 35 -7.884 -0.341 -2.276 IL 173 173 3 173 3 1 1 21 40 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 36 ] 30 - G - - - ML 174 173 3 176 3 1 1 16 35 -7.939 -0.021 -6.593 -1.526 -2.738 1.711 -2.125 D 175 173 3 176 3 0 0 16 34 -6.174 -1.687 -0.566 IL 176 176 3 176 3 1 1 20 38 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 37 ] 31 - C - - - ML 177 176 3 179 3 1 1 15 33 -7.939 -0.021 -6.593 -1.680 1.607 -2.502 -1.106 D 178 176 3 179 3 0 0 15 33 -6.174 -1.687 -0.566 IL 179 179 3 179 3 1 1 19 37 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 38 ] 32 - G - - - ML 180 179 3 182 3 1 1 13 31 -7.939 -0.021 -6.593 -1.526 -2.738 1.711 -2.125 D 181 179 3 182 3 0 0 13 32 -6.174 -1.687 -0.566 IL 182 182 3 182 3 1 1 18 36 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 39 ] 33 - G - - - ML 183 182 3 185 2 1 1 1 1 * 0.000 -1.526 -2.738 1.711 -2.125 D 184 182 3 185 2 0 0 0 0 * 0.000 IL 185 185 3 185 2 1 1 13 28 -1.823 -0.479 0.000 0.000 0.000 0.000 [ END 40 ] - - - - - - E 186 185 3 -1 0 0 0 0 0 // HMMER3/f [3.4 | Aug 2023] NAME mir-7910 ACC RF04035 DESC mir-7910 microRNA precursor family LENG 61 MAXL 147 ALPH RNA RF no MM no CONS yes CS yes MAP yes DATE Thu Jul 11 01:04:54 2024 COM [1] /hps/software/users/agb/rfam/bin/cmbuild -F CM SEED COM [2] /hps/software/users/agb/rfam/bin/cmcalibrate --cpu 8 /nfs/production/agb/rfam/15/rescan/families/RF04035/CM NSEQ 2 EFFN 1.910156 CKSUM 2641965190 STATS LOCAL MSV -8.6023 0.72974 STATS LOCAL VITERBI -9.4109 0.72974 STATS LOCAL FORWARD -2.9880 0.72974 HMM A C G U m->m m->i m->d i->m i->i d->m d->d COMPO 1.52869 1.50356 1.34261 1.20504 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 0.00000 * 1 2.72402 1.73333 2.45390 0.39789 1 U - - < 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 2 2.73060 1.73347 2.45650 0.39688 2 U - - < 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 3 2.73345 1.73353 2.45762 0.39644 3 U - - < 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 4 2.44436 3.01048 0.20851 2.95346 4 G - - < 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 5 0.44435 2.51535 1.64923 2.45662 5 A - - < 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 6 0.44436 2.51533 1.64922 2.45658 6 A - - < 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 7 0.44438 2.51526 1.64922 2.45647 7 A - - < 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 8 2.73428 1.73355 2.45795 0.39632 8 U - - < 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 9 2.44404 3.01014 0.20860 2.95296 9 G - - < 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 10 2.47111 3.31519 0.19406 2.89008 10 G - - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 11 1.87134 1.06777 2.41012 0.88551 11 u - - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 12 1.63908 2.03544 1.15488 1.02131 12 u - - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 13 2.91708 0.30933 2.69657 1.93426 13 C - - < 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 14 0.44729 2.50730 1.64840 2.44422 14 A - - < 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 15 1.82203 2.66669 0.36988 2.55098 15 G - - < 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 16 1.87134 1.06777 2.41012 0.88551 16 u - - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 17 2.13153 1.00147 1.85932 1.02659 17 c - - < 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 18 2.97555 0.30091 2.72262 1.94398 18 C - - < 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 19 2.97693 0.30072 2.72323 1.94421 19 C - - < 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 20 2.73654 1.73360 2.45883 0.39597 20 U - - < 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 21 0.44417 2.51585 1.64928 2.45738 21 A - - < 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 22 2.40678 2.40590 2.91483 0.26723 22 U - - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 23 2.73351 1.73354 2.45764 0.39644 23 U - - < 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 24 2.97652 0.30077 2.72305 1.94414 24 C - - < 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 25 0.44408 2.51608 1.64930 2.45775 25 A - - < 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 26 0.44409 2.51606 1.64930 2.45771 26 A - - < 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 27 1.79405 1.22141 0.95139 1.87929 27 g - - < 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 28 2.47111 3.31519 0.19406 2.89008 28 G - - _ 1.38629 1.38629 1.38629 1.38629 0.34177 3.73767 1.32547 1.46634 0.26236 1.09861 0.40547 29 1.92923 0.54455 2.46235 1.66388 29 C - - _ 1.38629 1.38629 1.38629 1.38629 0.06487 3.46077 3.46077 1.46634 0.26236 0.16487 1.88392 30 2.47111 3.31519 0.19406 2.89008 30 G - - _ 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 31 2.58095 0.26379 3.15160 2.17704 31 C - - _ 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 32 2.47111 3.31519 0.19406 2.89008 32 G - - _ 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 33 2.47111 3.31519 0.19406 2.89008 33 G - - _ 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 34 2.10350 1.71938 1.78476 0.63308 34 U - - > 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 35 2.68882 1.91865 2.33068 0.37396 35 U - - > 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 36 2.69015 1.91876 2.33112 0.37374 36 U - - > 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 37 2.22181 2.89324 0.25942 2.73807 37 G - - > 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 38 0.44927 2.64164 1.57050 2.49229 38 A - - > 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 39 2.40678 2.40590 2.91483 0.26723 39 U - - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 40 2.68757 1.91855 2.33026 0.37417 40 U - - > 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 41 0.44998 2.63922 1.57042 2.48910 41 A - - > 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 42 2.22078 2.89196 0.25980 2.73644 42 G - - > 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 43 2.22163 2.89302 0.25949 2.73779 43 G - - > 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 44 1.17135 1.29622 1.30435 1.93006 44 a - - > 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 45 2.58095 0.26379 3.15160 2.17704 45 C - - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 46 2.76826 1.72510 2.47370 0.39334 46 U - - > 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 47 2.67906 1.91785 2.32740 0.37556 47 U - - > 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 48 2.21411 2.88368 0.26223 2.72593 48 G - - > 1.38629 1.38629 1.38629 1.38629 0.33120 3.73767 1.35429 1.46634 0.26236 1.09861 0.40547 49 1.92923 0.54455 2.46235 1.66388 49 C - - - 1.38629 1.38629 1.38629 1.38629 0.06421 3.47068 3.47068 1.46634 0.26236 2.55268 0.08107 50 1.90347 2.00028 2.37527 0.47375 50 U - - - 1.38629 1.38629 1.38629 1.38629 0.06421 3.47068 3.47068 1.46634 0.26236 2.55268 0.08107 51 1.90347 2.00028 2.37527 0.47375 51 U - - - 1.38629 1.38629 1.38629 1.38629 0.06421 3.47068 3.47068 1.46634 0.26236 0.16930 1.85954 52 3.16291 0.24513 2.84128 2.14774 52 C - - > 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 53 0.45048 2.63753 1.57037 2.48688 53 A - - > 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 54 2.68523 1.91836 2.32948 0.37455 54 U - - > 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 55 2.68572 1.91840 2.32964 0.37447 55 U - - > 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 56 2.68632 1.91844 2.32984 0.37437 56 U - - > 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 57 3.16745 0.24462 2.84316 2.14862 57 C - - > 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 58 0.45006 2.63896 1.57041 2.48875 58 A - - > 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 59 0.44990 2.63949 1.57043 2.48945 59 A - - > 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 60 0.44970 2.64018 1.57045 2.49036 60 A - - > 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 61 2.40678 2.40590 2.91483 0.26723 61 U - - : 1.38629 1.38629 1.38629 1.38629 0.02469 3.71357 * 1.46634 0.26236 0.00000 * //