INFERNAL1/a [1.1.5 | Sep 2023] NAME mir-8512 ACC RF04033 DESC mir-8512 microRNA precursor family STATES 187 NODES 41 CLEN 61 W 76 ALPH RNA RF no CONS yes MAP yes DATE Fri Jul 12 14:05:01 2024 COM [1] /hps/software/users/agb/rfam/bin/cmbuild -F CM SEED COM [2] /hps/software/users/agb/rfam/bin/cmcalibrate --cpu 8 /nfs/production/agb/rfam/15/rescan/families/RF04033/CM PBEGIN 0.05 PEND 0.05 WBETA 1e-07 QDBBETA1 1e-07 QDBBETA2 1e-15 N2OMEGA 1.52588e-05 N3OMEGA 1.52588e-05 ELSELF -0.08926734 NSEQ 2 EFFN 1.503906 CKSUM 1726592388 NULL 0.000 0.000 0.000 0.000 GA 90.00 TC 95.90 NC 71.30 EFP7GF -6.0246 0.72547 ECMLC 0.66926 -5.14576 3.45985 1600000 380589 0.003153 ECMGC 0.42854 -15.45846 -1.66580 1600000 147581 0.002710 ECMLI 0.67931 -3.30973 4.63284 1600000 264495 0.004537 ECMGI 0.45981 -10.82389 1.15968 1600000 98872 0.004046 CM [ ROOT 0 ] - - - - - - S 0 -1 0 1 4 1 1 76 96 -6.762 -6.969 -0.061 -5.383 IL 1 1 2 1 4 1 12 80 100 -1.686 -2.369 -1.117 -4.855 0.000 0.000 0.000 0.000 IR 2 2 3 2 3 1 12 79 99 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 1 ] 1 - C - - - ML 3 2 3 5 3 1 12 76 96 -7.793 -0.023 -6.447 -1.334 1.493 -2.140 -0.832 D 4 2 3 5 3 0 6 75 95 -6.174 -1.687 -0.566 IL 5 5 3 5 3 1 11 78 98 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 2 ] 2 - A - - - ML 6 5 3 8 3 1 11 75 95 -7.793 -0.023 -6.447 1.633 -2.029 -1.695 -1.539 D 7 5 3 8 3 0 6 74 93 -6.174 -1.687 -0.566 IL 8 8 3 8 3 1 10 77 97 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 3 ] 3 - A - - - ML 9 8 3 11 3 1 10 74 94 -8.195 -0.021 -6.513 1.633 -2.029 -1.695 -1.539 D 10 8 3 11 3 0 5 73 92 -5.620 -0.734 -1.403 IL 11 11 3 11 3 1 9 75 94 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 4 ] - 61 - U - - MR 12 11 3 14 3 1 9 73 93 -8.195 -0.021 -6.513 -1.176 -1.228 -1.891 1.517 D 13 11 3 14 3 0 3 72 91 -6.390 -1.568 -0.620 IR 14 14 3 14 3 1 8 74 93 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 5 ] - 60 - C - - MR 15 14 3 17 3 1 9 72 92 -8.195 -0.021 -6.513 -1.334 1.493 -2.140 -0.832 D 16 14 3 17 3 0 2 71 90 -6.390 -1.568 -0.620 IR 17 17 3 17 3 1 7 73 92 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 6 ] - 59 - C - - MR 18 17 3 20 5 1 8 71 91 -6.945 -0.043 -6.760 -6.972 -7.864 -1.334 1.493 -2.140 -0.832 D 19 17 3 20 5 0 2 70 89 -5.352 -0.707 -2.978 -4.409 -2.404 IR 20 20 3 20 5 1 5 72 91 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 7 ] 4 58 U A - - MP 21 20 3 25 6 2 8 70 90 -9.039 -8.979 -0.022 -7.755 -8.035 -8.430 -3.848 -3.659 -3.723 0.019 -2.742 -4.317 1.578 -3.412 -3.732 0.331 -4.121 -1.568 3.135 -4.011 -0.426 -2.587 ML 22 20 3 25 6 1 4 69 88 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 23 20 3 25 6 1 3 69 88 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 24 20 3 25 6 0 0 67 86 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 25 25 5 25 6 1 5 70 89 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 26 26 6 26 5 1 5 70 89 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 8 ] 5 57 A U - - MP 27 26 6 31 6 2 6 68 88 -9.039 -8.979 -0.022 -7.755 -8.035 -8.430 -3.522 -2.626 -3.558 3.122 -3.764 -4.806 0.519 -3.615 -3.463 1.371 -3.997 -0.150 0.100 -4.037 -1.424 -2.410 ML 28 26 6 31 6 1 3 67 87 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 29 26 6 31 6 1 2 67 87 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 30 26 6 31 6 0 0 66 85 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 31 31 5 31 6 1 4 68 87 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 32 32 6 32 5 1 4 68 87 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 9 ] 6 56 C G - - MP 33 32 6 37 4 2 5 66 85 -6.762 -6.969 -0.061 -5.383 -4.209 -4.081 -3.954 -0.348 -2.752 -4.410 3.430 -3.527 -3.994 -0.052 -4.289 -2.025 0.794 -4.299 -0.452 -2.846 ML 34 32 6 37 4 1 2 67 86 -3.758 -3.940 -0.507 -2.670 0.368 -0.385 -0.191 0.094 MR 35 32 6 37 4 1 1 66 86 -4.809 -3.838 -1.706 -0.766 0.368 -0.385 -0.191 0.094 D 36 32 6 37 4 0 0 65 85 -4.568 -4.250 -2.265 -0.520 IL 37 37 5 37 4 1 3 68 87 -1.686 -2.369 -1.117 -4.855 0.000 0.000 0.000 0.000 IR 38 38 6 38 3 1 3 67 86 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 10 ] 7 - C - - - ML 39 38 6 41 3 1 3 64 83 -8.195 -0.021 -6.513 -1.334 1.493 -2.140 -0.832 D 40 38 6 41 3 0 0 62 82 -5.620 -0.734 -1.403 IL 41 41 3 41 3 1 2 64 84 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 11 ] - 55 - A - - MR 42 41 3 44 5 1 3 63 82 -6.945 -0.043 -6.760 -6.972 -7.864 1.633 -2.029 -1.695 -1.539 D 43 41 3 44 5 0 0 61 80 -5.352 -0.707 -2.978 -4.409 -2.404 IR 44 44 3 44 5 1 1 63 82 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 12 ] 8 54 G C - - MP 45 44 3 49 6 2 4 62 81 -9.039 -8.979 -0.022 -7.755 -8.035 -8.430 -4.410 -2.937 -4.485 0.416 -4.765 -4.560 -0.210 -4.699 -4.103 3.547 -4.465 -0.627 -0.606 -4.248 -2.231 -3.367 ML 46 44 3 49 6 1 1 60 79 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 47 44 3 49 6 1 1 60 79 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 48 44 3 49 6 0 0 58 77 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 49 49 5 49 6 1 1 61 80 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 50 50 6 50 5 1 1 61 80 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 13 ] 9 53 G C - - MP 51 50 6 55 4 2 2 60 79 -6.695 -7.940 -0.091 -4.393 -4.410 -2.937 -4.485 0.416 -4.765 -4.560 -0.210 -4.699 -4.103 3.547 -4.465 -0.627 -0.606 -4.248 -2.231 -3.367 ML 52 50 6 55 4 1 1 59 78 -2.408 -4.532 -1.293 -1.473 0.368 -0.385 -0.191 0.094 MR 53 50 6 55 4 1 1 59 78 -4.102 -12.528 -0.390 -2.485 0.368 -0.385 -0.191 0.094 D 54 50 6 55 4 0 0 57 76 -12.737 -14.007 -2.036 -0.404 IL 55 55 5 55 4 1 1 59 78 -2.817 -4.319 -0.613 -2.698 0.000 0.000 0.000 0.000 IR 56 56 6 56 3 1 1 59 79 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 14 ] - 52 - A - - MR 57 56 6 59 5 1 1 58 77 -6.945 -0.043 -6.760 -6.972 -7.864 1.633 -2.029 -1.695 -1.539 D 58 56 6 59 5 0 0 56 75 -5.352 -0.707 -2.978 -4.409 -2.404 IR 59 59 3 59 5 1 1 58 77 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 15 ] 10 51 A U - - MP 60 59 3 64 6 2 2 57 76 -9.039 -8.979 -0.022 -7.755 -8.035 -8.430 -3.522 -2.626 -3.558 3.122 -3.764 -4.806 0.519 -3.615 -3.463 1.371 -3.997 -0.150 0.100 -4.037 -1.424 -2.410 ML 61 59 3 64 6 1 1 55 74 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 62 59 3 64 6 1 1 55 74 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 63 59 3 64 6 0 0 53 72 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 64 64 5 64 6 1 1 56 75 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 65 65 6 65 5 1 1 56 75 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 16 ] 11 50 C G - - MP 66 65 6 70 6 2 2 55 74 -9.039 -8.979 -0.022 -7.755 -8.035 -8.430 -4.209 -4.081 -3.954 -0.348 -2.752 -4.410 3.430 -3.527 -3.994 -0.052 -4.289 -2.025 0.794 -4.299 -0.452 -2.846 ML 67 65 6 70 6 1 1 53 72 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 68 65 6 70 6 1 1 53 72 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 69 65 6 70 6 0 0 51 70 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 70 70 5 70 6 1 1 54 73 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 71 71 6 71 5 1 1 54 73 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 17 ] 12 49 U A - - MP 72 71 6 76 6 2 2 53 72 -9.039 -8.979 -0.022 -7.755 -8.035 -8.430 -3.848 -3.659 -3.723 0.019 -2.742 -4.317 1.578 -3.412 -3.732 0.331 -4.121 -1.568 3.135 -4.011 -0.426 -2.587 ML 73 71 6 76 6 1 1 51 70 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 74 71 6 76 6 1 1 51 70 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 75 71 6 76 6 0 0 49 68 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 76 76 5 76 6 1 1 52 71 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 77 77 6 77 5 1 1 52 71 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 18 ] 13 48 A U - - MP 78 77 6 82 6 2 2 51 70 -9.039 -8.979 -0.022 -7.755 -8.035 -8.430 -3.522 -2.626 -3.558 3.122 -3.764 -4.806 0.519 -3.615 -3.463 1.371 -3.997 -0.150 0.100 -4.037 -1.424 -2.410 ML 79 77 6 82 6 1 1 49 68 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 80 77 6 82 6 1 1 49 68 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 81 77 6 82 6 0 0 47 66 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 82 82 5 82 6 1 1 50 69 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 83 83 6 83 5 1 1 50 69 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 19 ] 14 47 U A - - MP 84 83 6 88 6 2 2 49 68 -9.039 -8.979 -0.022 -7.755 -8.035 -8.430 -3.848 -3.659 -3.723 0.019 -2.742 -4.317 1.578 -3.412 -3.732 0.331 -4.121 -1.568 3.135 -4.011 -0.426 -2.587 ML 85 83 6 88 6 1 1 47 66 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 86 83 6 88 6 1 1 47 66 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 87 83 6 88 6 0 0 45 64 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 88 88 5 88 6 1 1 48 67 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 89 89 6 89 5 1 1 48 67 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 20 ] 15 46 G C - - MP 90 89 6 94 6 2 2 47 66 -9.039 -8.979 -0.022 -7.755 -8.035 -8.430 -4.410 -2.937 -4.485 0.416 -4.765 -4.560 -0.210 -4.699 -4.103 3.547 -4.465 -0.627 -0.606 -4.248 -2.231 -3.367 ML 91 89 6 94 6 1 1 45 64 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 92 89 6 94 6 1 1 45 64 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 93 89 6 94 6 0 0 43 62 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 94 94 5 94 6 1 1 46 65 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 95 95 6 95 5 1 1 46 65 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 21 ] 16 45 A U - - MP 96 95 6 100 6 2 2 45 64 -9.039 -8.979 -0.022 -7.755 -8.035 -8.430 -3.522 -2.626 -3.558 3.122 -3.764 -4.806 0.519 -3.615 -3.463 1.371 -3.997 -0.150 0.100 -4.037 -1.424 -2.410 ML 97 95 6 100 6 1 1 43 62 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 98 95 6 100 6 1 1 43 62 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 99 95 6 100 6 0 0 41 60 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 100 100 5 100 6 1 1 44 63 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 101 101 6 101 5 1 1 44 63 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 22 ] 17 44 A U - - MP 102 101 6 106 6 2 2 43 62 -9.039 -8.979 -0.022 -7.755 -8.035 -8.430 -3.522 -2.626 -3.558 3.122 -3.764 -4.806 0.519 -3.615 -3.463 1.371 -3.997 -0.150 0.100 -4.037 -1.424 -2.410 ML 103 101 6 106 6 1 1 41 60 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 104 101 6 106 6 1 1 41 60 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 105 101 6 106 6 0 0 39 58 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 106 106 5 106 6 1 1 42 61 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 107 107 6 107 5 1 1 42 61 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 23 ] 18 43 A U - - MP 108 107 6 112 6 2 2 41 60 -9.039 -8.979 -0.022 -7.755 -8.035 -8.430 -3.522 -2.626 -3.558 3.122 -3.764 -4.806 0.519 -3.615 -3.463 1.371 -3.997 -0.150 0.100 -4.037 -1.424 -2.410 ML 109 107 6 112 6 1 1 39 58 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 110 107 6 112 6 1 1 39 58 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 111 107 6 112 6 0 0 37 56 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 112 112 5 112 6 1 1 40 59 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 113 113 6 113 5 1 1 40 59 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 24 ] 19 42 g u - - MP 114 113 6 118 6 2 2 39 58 -9.039 -8.979 -0.022 -7.755 -8.035 -8.430 -3.405 -2.262 -3.552 1.254 -4.095 -4.829 0.256 -3.607 -3.277 1.641 -3.788 2.819 -0.105 -4.075 -1.684 -2.302 ML 115 113 6 118 6 1 1 37 56 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 116 113 6 118 6 1 1 37 56 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 117 113 6 118 6 0 0 35 54 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 118 118 5 118 6 1 1 38 57 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 119 119 6 119 5 1 1 38 57 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 25 ] 20 41 C G - - MP 120 119 6 124 6 2 2 37 56 -9.039 -8.979 -0.022 -7.755 -8.035 -8.430 -4.209 -4.081 -3.954 -0.348 -2.752 -4.410 3.430 -3.527 -3.994 -0.052 -4.289 -2.025 0.794 -4.299 -0.452 -2.846 ML 121 119 6 124 6 1 1 36 55 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 122 119 6 124 6 1 1 36 55 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 123 119 6 124 6 0 0 34 53 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 124 124 5 124 6 1 1 36 55 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 125 125 6 125 5 1 1 36 55 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 26 ] 21 40 C G - - MP 126 125 6 130 4 2 2 35 54 -6.762 -6.969 -0.061 -5.383 -4.209 -4.081 -3.954 -0.348 -2.752 -4.410 3.430 -3.527 -3.994 -0.052 -4.289 -2.025 0.794 -4.299 -0.452 -2.846 ML 127 125 6 130 4 1 1 35 54 -3.758 -3.940 -0.507 -2.670 0.368 -0.385 -0.191 0.094 MR 128 125 6 130 4 1 1 35 54 -4.809 -3.838 -1.706 -0.766 0.368 -0.385 -0.191 0.094 D 129 125 6 130 4 0 0 34 53 -4.568 -4.250 -2.265 -0.520 IL 130 130 5 130 4 1 1 37 56 -1.686 -2.369 -1.117 -4.855 0.000 0.000 0.000 0.000 IR 131 131 6 131 3 1 1 35 55 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 27 ] 22 - C - - - ML 132 131 6 134 3 1 1 32 51 -8.195 -0.021 -6.513 -1.334 1.493 -2.140 -0.832 D 133 131 6 134 3 0 0 31 49 -5.620 -0.734 -1.403 IL 134 134 3 134 3 1 1 33 51 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 28 ] - 39 - A - - MR 135 134 3 137 5 1 1 31 50 -6.945 -0.043 -6.760 -6.972 -7.864 1.633 -2.029 -1.695 -1.539 D 136 134 3 137 5 0 0 30 48 -5.352 -0.707 -2.978 -4.409 -2.404 IR 137 137 3 137 5 1 1 31 50 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 29 ] 23 38 A U - - MP 138 137 3 142 6 2 2 30 49 -9.039 -8.979 -0.022 -7.755 -8.035 -8.430 -3.522 -2.626 -3.558 3.122 -3.764 -4.806 0.519 -3.615 -3.463 1.371 -3.997 -0.150 0.100 -4.037 -1.424 -2.410 ML 139 137 3 142 6 1 1 29 47 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 140 137 3 142 6 1 1 28 47 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 141 137 3 142 6 0 0 26 45 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 142 142 5 142 6 1 1 30 48 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 143 143 6 143 5 1 1 29 48 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 30 ] 24 37 C G - - MP 144 143 6 148 4 2 2 28 47 -6.695 -7.940 -0.091 -4.393 -4.209 -4.081 -3.954 -0.348 -2.752 -4.410 3.430 -3.527 -3.994 -0.052 -4.289 -2.025 0.794 -4.299 -0.452 -2.846 ML 145 143 6 148 4 1 1 27 46 -2.408 -4.532 -1.293 -1.473 0.368 -0.385 -0.191 0.094 MR 146 143 6 148 4 1 1 27 46 -4.102 -12.528 -0.390 -2.485 0.368 -0.385 -0.191 0.094 D 147 143 6 148 4 0 0 25 44 -12.737 -14.007 -2.036 -0.404 IL 148 148 5 148 4 1 1 27 46 -2.817 -4.319 -0.613 -2.698 0.000 0.000 0.000 0.000 IR 149 149 6 149 3 1 1 28 46 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 31 ] - 36 - C - - MR 150 149 6 152 3 1 1 26 45 -8.195 -0.021 -6.513 -1.334 1.493 -2.140 -0.832 D 151 149 6 152 3 0 0 24 43 -6.390 -1.568 -0.620 IR 152 152 3 152 3 1 1 27 45 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 32 ] - 35 - A - - MR 153 152 3 155 5 1 1 25 44 -6.945 -0.043 -6.760 -6.972 -7.864 1.633 -2.029 -1.695 -1.539 D 154 152 3 155 5 0 0 23 42 -5.352 -0.707 -2.978 -4.409 -2.404 IR 155 155 3 155 5 1 1 25 44 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 33 ] 25 34 C G - - MP 156 155 3 160 6 2 2 24 43 -9.039 -8.979 -0.022 -7.755 -8.035 -8.430 -4.209 -4.081 -3.954 -0.348 -2.752 -4.410 3.430 -3.527 -3.994 -0.052 -4.289 -2.025 0.794 -4.299 -0.452 -2.846 ML 157 155 3 160 6 1 1 23 41 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 158 155 3 160 6 1 1 22 41 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 159 155 3 160 6 0 0 20 39 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 160 160 5 160 6 1 1 24 42 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 161 161 6 161 5 1 1 23 42 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 34 ] 26 33 U A - - MP 162 161 6 166 6 2 2 22 41 -9.039 -8.979 -0.022 -7.755 -8.035 -8.430 -3.848 -3.659 -3.723 0.019 -2.742 -4.317 1.578 -3.412 -3.732 0.331 -4.121 -1.568 3.135 -4.011 -0.426 -2.587 ML 163 161 6 166 6 1 1 21 40 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 164 161 6 166 6 1 1 21 40 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 165 161 6 166 6 0 0 19 38 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 166 166 5 166 6 1 1 22 40 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 167 167 6 167 5 1 1 21 40 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 35 ] 27 32 C G - - MP 168 167 6 172 4 2 2 20 38 -6.762 -6.969 -0.061 -5.383 -4.209 -4.081 -3.954 -0.348 -2.752 -4.410 3.430 -3.527 -3.994 -0.052 -4.289 -2.025 0.794 -4.299 -0.452 -2.846 ML 169 167 6 172 4 1 1 21 39 -3.758 -3.940 -0.507 -2.670 0.368 -0.385 -0.191 0.094 MR 170 167 6 172 4 1 1 20 39 -4.809 -3.838 -1.706 -0.766 0.368 -0.385 -0.191 0.094 D 171 167 6 172 4 0 0 19 38 -4.568 -4.250 -2.265 -0.520 IL 172 172 5 172 4 1 1 22 41 -1.686 -2.369 -1.117 -4.855 0.000 0.000 0.000 0.000 IR 173 173 6 173 3 1 1 21 40 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 36 ] 28 - C - - - ML 174 173 6 176 3 1 1 16 35 -7.793 -0.023 -6.447 -1.334 1.493 -2.140 -0.832 D 175 173 6 176 3 0 0 16 34 -6.174 -1.687 -0.566 IL 176 176 3 176 3 1 1 20 38 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 37 ] 29 - G - - - ML 177 176 3 179 3 1 1 15 33 -7.793 -0.023 -6.447 -1.214 -2.372 1.623 -1.757 D 178 176 3 179 3 0 0 15 33 -6.174 -1.687 -0.566 IL 179 179 3 179 3 1 1 19 37 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 38 ] 30 - A - - - ML 180 179 3 182 3 1 1 13 32 -7.793 -0.023 -6.447 1.633 -2.029 -1.695 -1.539 D 181 179 3 182 3 0 0 13 32 -6.174 -1.687 -0.566 IL 182 182 3 182 3 1 1 18 36 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 39 ] 31 - u - - - ML 183 182 3 185 2 1 1 1 1 * 0.000 -0.572 0.395 -1.332 0.692 D 184 182 3 185 2 0 0 0 0 * 0.000 IL 185 185 3 185 2 1 1 13 28 -1.823 -0.479 0.000 0.000 0.000 0.000 [ END 40 ] - - - - - - E 186 185 3 -1 0 0 0 0 0 // HMMER3/f [3.4 | Aug 2023] NAME mir-8512 ACC RF04033 DESC mir-8512 microRNA precursor family LENG 61 MAXL 148 ALPH RNA RF no MM no CONS yes CS yes MAP yes DATE Fri Jul 12 14:05:01 2024 COM [1] /hps/software/users/agb/rfam/bin/cmbuild -F CM SEED COM [2] /hps/software/users/agb/rfam/bin/cmcalibrate --cpu 8 /nfs/production/agb/rfam/15/rescan/families/RF04033/CM NSEQ 2 EFFN 1.800781 CKSUM 1726592388 STATS LOCAL MSV -7.9987 0.72547 STATS LOCAL VITERBI -8.9308 0.72547 STATS LOCAL FORWARD -3.3885 0.72547 HMM A C G U m->m m->i m->d i->m i->i d->m d->d COMPO 1.34197 1.28327 1.44684 1.48622 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 0.00000 * 1 2.50986 0.28409 3.07801 2.12054 1 C - - : 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 2 0.21040 2.96067 2.71254 2.63681 2 A - - : 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 3 0.21040 2.96067 2.71254 2.63681 3 A - - : 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 4 2.67503 1.69241 2.39136 0.42233 4 U - - < 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 5 0.47589 2.45081 1.60321 2.39477 5 A - - < 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 6 2.92005 0.31917 2.65770 1.90242 6 C - - < 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 7 2.50986 0.28409 3.07801 2.12054 7 C - - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 8 2.40648 2.94683 0.22084 2.89104 8 G - - < 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 9 2.40829 2.94869 0.22033 2.89371 9 G - - < 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 10 0.47826 2.44480 1.60277 2.38531 10 A - - < 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 11 2.90683 0.32114 2.65204 1.90032 11 C - - < 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 12 2.67293 1.69239 2.39057 0.42267 12 U - - < 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 13 0.47627 2.44984 1.60314 2.39324 13 A - - < 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 14 2.67554 1.69242 2.39156 0.42225 14 U - - < 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 15 2.40680 2.94716 0.22075 2.89151 15 G - - < 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 16 0.47614 2.45016 1.60316 2.39375 16 A - - < 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 17 0.47615 2.45014 1.60316 2.39371 17 A - - < 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 18 0.47617 2.45010 1.60316 2.39365 18 A - - < 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 19 1.80191 2.61136 0.38622 2.50153 19 G - - < 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 20 2.91576 0.31981 2.65587 1.90174 20 C - - < 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 21 2.91563 0.31982 2.65582 1.90172 21 C - - < 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 22 2.50986 0.28409 3.07801 2.12054 22 C - - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 23 0.47634 2.44965 1.60312 2.39294 23 A - - < 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 24 2.91831 0.31943 2.65696 1.90214 24 C - - < 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 25 2.90119 0.32199 2.64962 1.89941 25 C - - < 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 26 2.67158 1.69237 2.39006 0.42289 26 U - - < 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 27 2.91488 0.31994 2.65549 1.90160 27 C - - < 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 28 2.50986 0.28409 3.07801 2.12054 28 C - - _ 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 29 2.40814 3.24212 0.20933 2.81665 29 G - - _ 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 30 0.21040 2.96067 2.71254 2.63681 30 A - - _ 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 31 1.84795 1.07920 2.38376 0.89070 31 u - - _ 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 32 2.17707 2.82441 0.27641 2.67680 32 G - - > 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 33 0.47970 2.57170 1.52918 2.43139 33 A - - > 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 34 2.17820 2.82577 0.27598 2.67857 34 G - - > 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 35 0.21040 2.96067 2.71254 2.63681 35 A - - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 36 2.50986 0.28409 3.07801 2.12054 36 C - - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 37 2.17901 2.82674 0.27567 2.67982 37 G - - > 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 38 2.63114 1.86643 2.26765 0.40082 38 U - - > 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 39 0.21040 2.96067 2.71254 2.63681 39 A - - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 40 2.17514 2.82207 0.27716 2.67379 40 G - - > 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 41 2.17519 2.82214 0.27714 2.67388 41 G - - > 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 42 2.71713 1.67666 2.41588 0.41908 42 U - - > 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 43 2.62248 1.86583 2.26487 0.40232 43 U - - > 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 44 2.62267 1.86585 2.26493 0.40229 44 U - - > 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 45 2.62292 1.86586 2.26501 0.40224 45 U - - > 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 46 3.10455 0.25881 2.77796 2.11181 46 C - - > 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 47 0.48013 2.57037 1.52917 2.42959 47 A - - > 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 48 2.62404 1.86594 2.26537 0.40205 48 U - - > 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 49 0.47999 2.57081 1.52917 2.43019 49 A - - > 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 50 2.17685 2.82414 0.27650 2.67646 50 G - - > 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 51 2.62613 1.86608 2.26604 0.40168 51 U - - > 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 52 0.21040 2.96067 2.71254 2.63681 52 A - - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 53 3.11610 0.25742 2.78264 2.11405 53 C - - > 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 54 3.11951 0.25701 2.78402 2.11470 54 C - - > 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 55 0.21040 2.96067 2.71254 2.63681 55 A - - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 56 2.17833 2.82593 0.27593 2.67877 56 G - - > 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 57 2.62954 1.86632 2.26714 0.40109 57 U - - > 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 58 0.47905 2.57377 1.52920 2.43419 58 A - - > 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 59 2.50986 0.28409 3.07801 2.12054 59 C - - : 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 60 2.50986 0.28409 3.07801 2.12054 60 C - - : 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 61 2.35275 2.36145 2.85791 0.28340 61 U - - : 1.38629 1.38629 1.38629 1.38629 0.02469 3.71357 * 1.46634 0.26236 0.00000 * //