INFERNAL1/a [1.1.5 | Sep 2023] NAME mir-7964 ACC RF04025 DESC mir-7964 microRNA precursor family STATES 157 NODES 36 CLEN 51 W 66 ALPH RNA RF no CONS yes MAP yes DATE Wed Jul 10 07:50:30 2024 COM [1] /hps/software/users/agb/rfam/bin/cmbuild -F CM SEED COM [2] /hps/software/users/agb/rfam/bin/cmcalibrate --cpu 8 /nfs/production/agb/rfam/15/rescan/families/RF04025/CM PBEGIN 0.05 PEND 0.05 WBETA 1e-07 QDBBETA1 1e-07 QDBBETA2 1e-15 N2OMEGA 1.52588e-05 N3OMEGA 1.52588e-05 ELSELF -0.08926734 NSEQ 2 EFFN 2.000000 CKSUM 318974538 NULL 0.000 0.000 0.000 0.000 GA 80.00 TC 83.70 NC 37.80 EFP7GF -4.5702 0.73310 ECMLC 0.68410 -5.00538 3.69437 1600000 461197 0.002602 ECMGC 0.40848 -17.59815 -2.63060 1600000 180845 0.002212 ECMLI 0.62714 -4.35949 4.61663 1600000 334147 0.003591 ECMGI 0.45315 -12.46320 0.03995 1600000 115529 0.003462 CM [ ROOT 0 ] - - - - - - S 0 -1 0 1 4 1 1 66 86 -6.891 -8.136 -0.079 -4.590 IL 1 1 2 1 4 1 7 68 88 -2.817 -4.319 -0.613 -2.698 0.000 0.000 0.000 0.000 IR 2 2 3 2 3 1 9 68 88 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 1 ] - 51 - C - - MR 3 2 3 5 3 1 10 67 86 -8.380 -0.018 -6.697 -1.806 1.641 -2.632 -1.207 D 4 2 3 5 3 0 3 65 85 -6.390 -1.568 -0.620 IR 5 5 3 5 3 1 8 67 87 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 2 ] - 50 - C - - MR 6 5 3 8 5 1 9 66 85 -7.117 -0.038 -6.932 -7.144 -8.036 -1.806 1.641 -2.632 -1.207 D 7 5 3 8 5 0 2 64 84 -5.352 -0.707 -2.978 -4.409 -2.404 IR 8 8 3 8 5 1 6 66 85 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 3 ] 1 49 U A - - MP 9 8 3 13 6 2 10 65 84 -9.118 -9.058 -0.021 -7.834 -8.114 -8.509 -4.256 -4.083 -4.087 -0.373 -3.015 -4.645 1.315 -3.716 -4.092 -0.129 -4.462 -1.980 3.359 -4.405 -0.690 -2.909 ML 10 8 3 13 6 1 4 63 83 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 11 8 3 13 6 1 4 63 83 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 12 8 3 13 6 0 1 61 80 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 13 13 5 13 6 1 6 64 84 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 14 14 6 14 5 1 6 64 83 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 4 ] 2 48 A U - - MP 15 14 6 19 6 2 9 63 82 -9.118 -9.058 -0.021 -7.834 -8.114 -8.509 -3.842 -2.861 -3.857 3.364 -4.221 -5.288 0.082 -3.896 -3.747 1.023 -4.297 -0.328 -0.335 -4.467 -1.858 -2.688 ML 16 14 6 19 6 1 4 61 81 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 17 14 6 19 6 1 3 61 81 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 18 14 6 19 6 0 0 59 79 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 19 19 5 19 6 1 5 62 82 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 20 20 6 20 5 1 5 62 81 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 5 ] 3 47 G C - - MP 21 20 6 25 6 2 7 61 80 -9.118 -9.058 -0.021 -7.834 -8.114 -8.509 -4.798 -3.121 -4.902 0.163 -5.312 -4.716 -0.662 -5.149 -4.364 3.651 -4.697 -0.822 -1.046 -4.505 -2.702 -3.778 ML 22 20 6 25 6 1 3 60 79 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 23 20 6 25 6 1 2 60 79 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 24 20 6 25 6 0 0 58 78 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 25 25 5 25 6 1 4 60 80 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 26 26 6 26 5 1 4 60 80 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 6 ] 4 46 C G - - MP 27 26 6 31 4 2 5 59 78 -6.977 -7.184 -0.052 -5.598 -4.612 -4.524 -4.292 -0.750 -2.996 -4.695 3.570 -3.812 -4.343 -0.519 -4.597 -2.472 0.512 -4.677 -0.704 -3.181 ML 28 26 6 31 4 1 2 59 79 -3.758 -3.940 -0.507 -2.670 0.368 -0.385 -0.191 0.094 MR 29 26 6 31 4 1 1 58 78 -4.809 -3.838 -1.706 -0.766 0.368 -0.385 -0.191 0.094 D 30 26 6 31 4 0 0 57 77 -4.568 -4.250 -2.265 -0.520 IL 31 31 5 31 4 1 4 60 80 -1.686 -2.369 -1.117 -4.855 0.000 0.000 0.000 0.000 IR 32 32 6 32 3 1 3 59 79 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 7 ] 5 - C - - - ML 33 32 6 35 3 1 4 56 75 -8.380 -0.018 -6.697 -1.806 1.641 -2.632 -1.207 D 34 32 6 35 3 0 0 55 74 -5.620 -0.734 -1.403 IL 35 35 3 35 3 1 2 57 76 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 8 ] - 45 - U - - MR 36 35 3 38 5 1 4 55 74 -7.117 -0.038 -6.932 -7.144 -8.036 -1.535 -1.523 -2.271 1.632 D 37 35 3 38 5 0 0 54 73 -5.352 -0.707 -2.978 -4.409 -2.404 IR 38 38 3 38 5 1 2 55 75 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 9 ] 6 44 G C - - MP 39 38 3 43 6 2 5 54 73 -9.118 -9.058 -0.021 -7.834 -8.114 -8.509 -4.798 -3.121 -4.902 0.163 -5.312 -4.716 -0.662 -5.149 -4.364 3.651 -4.697 -0.822 -1.046 -4.505 -2.702 -3.778 ML 40 38 3 43 6 1 1 53 72 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 41 38 3 43 6 1 1 53 72 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 42 38 3 43 6 0 0 51 70 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 43 43 5 43 6 1 1 54 73 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 44 44 6 44 5 1 1 53 73 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 10 ] 7 43 U G - - MP 45 44 6 49 6 2 4 52 71 -9.118 -9.058 -0.021 -7.834 -8.114 -8.509 -4.148 -4.071 -3.837 -0.400 -2.577 -4.252 1.711 -3.355 -3.878 -0.217 -4.164 -2.070 0.854 -4.228 3.041 -2.746 ML 46 44 6 49 6 1 1 51 71 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 47 44 6 49 6 1 1 51 71 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 48 44 6 49 6 0 0 49 69 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 49 49 5 49 6 1 1 52 71 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 50 50 6 50 5 1 1 52 71 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 11 ] 8 42 G C - - MP 51 50 6 55 4 2 2 50 69 -6.977 -7.184 -0.052 -5.598 -4.798 -3.121 -4.902 0.163 -5.312 -4.716 -0.662 -5.149 -4.364 3.651 -4.697 -0.822 -1.046 -4.505 -2.702 -3.778 ML 52 50 6 55 4 1 1 51 70 -3.758 -3.940 -0.507 -2.670 0.368 -0.385 -0.191 0.094 MR 53 50 6 55 4 1 1 50 70 -4.809 -3.838 -1.706 -0.766 0.368 -0.385 -0.191 0.094 D 54 50 6 55 4 0 0 49 69 -4.568 -4.250 -2.265 -0.520 IL 55 55 5 55 4 1 1 52 72 -1.686 -2.369 -1.117 -4.855 0.000 0.000 0.000 0.000 IR 56 56 6 56 3 1 1 51 70 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 12 ] 9 - U - - - ML 57 56 6 59 3 1 1 48 67 -7.991 -0.020 -6.645 -1.535 -1.523 -2.271 1.632 D 58 56 6 59 3 0 0 46 66 -6.174 -1.687 -0.566 IL 59 59 3 59 3 1 1 50 69 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 13 ] 10 - U - - - ML 60 59 3 62 3 1 1 47 66 -8.380 -0.018 -6.697 -1.535 -1.523 -2.271 1.632 D 61 59 3 62 3 0 0 45 64 -5.620 -0.734 -1.403 IL 62 62 3 62 3 1 1 47 66 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 14 ] - 41 - U - - MR 63 62 3 65 3 1 1 46 65 -8.380 -0.018 -6.697 -1.535 -1.523 -2.271 1.632 D 64 62 3 65 3 0 0 44 63 -6.390 -1.568 -0.620 IR 65 65 3 65 3 1 1 46 65 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 15 ] - 40 - C - - MR 66 65 3 68 5 1 1 45 64 -7.117 -0.038 -6.932 -7.144 -8.036 -1.806 1.641 -2.632 -1.207 D 67 65 3 68 5 0 0 43 62 -5.352 -0.707 -2.978 -4.409 -2.404 IR 68 68 3 68 5 1 1 45 64 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 16 ] 11 39 U A - - MP 69 68 3 73 6 2 2 44 63 -9.118 -9.058 -0.021 -7.834 -8.114 -8.509 -4.256 -4.083 -4.087 -0.373 -3.015 -4.645 1.315 -3.716 -4.092 -0.129 -4.462 -1.980 3.359 -4.405 -0.690 -2.909 ML 70 68 3 73 6 1 1 42 61 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 71 68 3 73 6 1 1 42 61 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 72 68 3 73 6 0 0 40 59 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 73 73 5 73 6 1 1 43 62 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 74 74 6 74 5 1 1 43 62 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 17 ] 12 38 G C - - MP 75 74 6 79 6 2 2 42 61 -9.118 -9.058 -0.021 -7.834 -8.114 -8.509 -4.798 -3.121 -4.902 0.163 -5.312 -4.716 -0.662 -5.149 -4.364 3.651 -4.697 -0.822 -1.046 -4.505 -2.702 -3.778 ML 76 74 6 79 6 1 1 40 59 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 77 74 6 79 6 1 1 40 59 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 78 74 6 79 6 0 0 38 57 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 79 79 5 79 6 1 1 41 60 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 80 80 6 80 5 1 1 41 60 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 18 ] 13 37 G C - - MP 81 80 6 85 4 2 2 40 59 -6.891 -8.136 -0.079 -4.590 -4.798 -3.121 -4.902 0.163 -5.312 -4.716 -0.662 -5.149 -4.364 3.651 -4.697 -0.822 -1.046 -4.505 -2.702 -3.778 ML 82 80 6 85 4 1 1 39 58 -2.408 -4.532 -1.293 -1.473 0.368 -0.385 -0.191 0.094 MR 83 80 6 85 4 1 1 39 58 -4.102 -12.528 -0.390 -2.485 0.368 -0.385 -0.191 0.094 D 84 80 6 85 4 0 0 37 56 -12.737 -14.007 -2.036 -0.404 IL 85 85 5 85 4 1 1 39 58 -2.817 -4.319 -0.613 -2.698 0.000 0.000 0.000 0.000 IR 86 86 6 86 3 1 1 39 58 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 19 ] - 36 - A - - MR 87 86 6 89 3 1 1 38 57 -8.380 -0.018 -6.697 1.730 -2.426 -2.052 -1.973 D 88 86 6 89 3 0 0 36 55 -6.390 -1.568 -0.620 IR 89 89 3 89 3 1 1 38 57 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 20 ] - 35 - a - - MR 90 89 3 92 5 1 1 37 56 -7.117 -0.038 -6.932 -7.144 -8.036 0.713 -1.419 0.512 -0.832 D 91 89 3 92 5 0 0 35 54 -5.352 -0.707 -2.978 -4.409 -2.404 IR 92 92 3 92 5 1 1 37 56 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 21 ] 14 34 G C - - MP 93 92 3 97 6 2 2 36 55 -9.118 -9.058 -0.021 -7.834 -8.114 -8.509 -4.798 -3.121 -4.902 0.163 -5.312 -4.716 -0.662 -5.149 -4.364 3.651 -4.697 -0.822 -1.046 -4.505 -2.702 -3.778 ML 94 92 3 97 6 1 1 34 53 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 95 92 3 97 6 1 1 34 53 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 96 92 3 97 6 0 0 32 51 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 97 97 5 97 6 1 1 35 54 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 98 98 6 98 5 1 1 35 54 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 22 ] 15 33 A U - - MP 99 98 6 103 6 2 2 34 53 -9.118 -9.058 -0.021 -7.834 -8.114 -8.509 -3.842 -2.861 -3.857 3.364 -4.221 -5.288 0.082 -3.896 -3.747 1.023 -4.297 -0.328 -0.335 -4.467 -1.858 -2.688 ML 100 98 6 103 6 1 1 32 51 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 101 98 6 103 6 1 1 32 51 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 102 98 6 103 6 0 0 30 49 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 103 103 5 103 6 1 1 33 52 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 104 104 6 104 5 1 1 33 52 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 23 ] 16 32 C G - - MP 105 104 6 109 6 2 2 32 51 -9.118 -9.058 -0.021 -7.834 -8.114 -8.509 -4.612 -4.524 -4.292 -0.750 -2.996 -4.695 3.570 -3.812 -4.343 -0.519 -4.597 -2.472 0.512 -4.677 -0.704 -3.181 ML 106 104 6 109 6 1 1 30 49 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 107 104 6 109 6 1 1 30 49 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 108 104 6 109 6 0 0 28 47 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 109 109 5 109 6 1 1 31 50 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 110 110 6 110 5 1 1 31 50 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 24 ] 17 31 C G - - MP 111 110 6 115 6 2 2 29 49 -9.118 -9.058 -0.021 -7.834 -8.114 -8.509 -4.612 -4.524 -4.292 -0.750 -2.996 -4.695 3.570 -3.812 -4.343 -0.519 -4.597 -2.472 0.512 -4.677 -0.704 -3.181 ML 112 110 6 115 6 1 1 28 47 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 113 110 6 115 6 1 1 28 47 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 114 110 6 115 6 0 0 26 45 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 115 115 5 115 6 1 1 29 48 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 116 116 6 116 5 1 1 29 48 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 25 ] 18 30 C G - - MP 117 116 6 121 6 2 2 27 47 -9.118 -9.058 -0.021 -7.834 -8.114 -8.509 -4.612 -4.524 -4.292 -0.750 -2.996 -4.695 3.570 -3.812 -4.343 -0.519 -4.597 -2.472 0.512 -4.677 -0.704 -3.181 ML 118 116 6 121 6 1 1 27 46 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 119 116 6 121 6 1 1 27 46 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 120 116 6 121 6 0 0 25 44 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 121 121 5 121 6 1 1 27 46 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 122 122 6 122 5 1 1 27 46 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 26 ] 19 29 G C - - MP 123 122 6 127 4 2 2 25 45 -6.977 -7.184 -0.052 -5.598 -4.798 -3.121 -4.902 0.163 -5.312 -4.716 -0.662 -5.149 -4.364 3.651 -4.697 -0.822 -1.046 -4.505 -2.702 -3.778 ML 124 122 6 127 4 1 1 26 45 -3.758 -3.940 -0.507 -2.670 0.368 -0.385 -0.191 0.094 MR 125 122 6 127 4 1 1 26 45 -4.809 -3.838 -1.706 -0.766 0.368 -0.385 -0.191 0.094 D 126 122 6 127 4 0 0 25 44 -4.568 -4.250 -2.265 -0.520 IL 127 127 5 127 4 1 1 28 47 -1.686 -2.369 -1.117 -4.855 0.000 0.000 0.000 0.000 IR 128 128 6 128 3 1 1 26 46 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 27 ] 20 - U - - - ML 129 128 6 131 5 1 1 23 42 -7.117 -0.038 -6.932 -7.144 -8.036 -1.535 -1.523 -2.271 1.632 D 130 128 6 131 5 0 0 22 41 -4.959 -0.803 -4.221 -2.596 -2.508 IL 131 131 3 131 5 1 1 23 42 -2.408 -0.496 -4.087 -5.920 -5.193 0.000 0.000 0.000 0.000 [ MATP 28 ] 21 28 G C - - MP 132 131 3 136 4 2 2 22 41 -6.977 -7.184 -0.052 -5.598 -4.798 -3.121 -4.902 0.163 -5.312 -4.716 -0.662 -5.149 -4.364 3.651 -4.697 -0.822 -1.046 -4.505 -2.702 -3.778 ML 133 131 3 136 4 1 1 23 42 -3.758 -3.940 -0.507 -2.670 0.368 -0.385 -0.191 0.094 MR 134 131 3 136 4 1 1 22 41 -4.809 -3.838 -1.706 -0.766 0.368 -0.385 -0.191 0.094 D 135 131 3 136 4 0 0 21 40 -4.568 -4.250 -2.265 -0.520 IL 136 136 5 136 4 1 1 24 43 -1.686 -2.369 -1.117 -4.855 0.000 0.000 0.000 0.000 IR 137 137 6 137 3 1 1 23 42 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 29 ] 22 - A - - - ML 138 137 6 140 3 1 1 19 37 -7.991 -0.020 -6.645 1.730 -2.426 -2.052 -1.973 D 139 137 6 140 3 0 0 18 37 -6.174 -1.687 -0.566 IL 140 140 3 140 3 1 1 22 41 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 30 ] 23 - a - - - ML 141 140 3 143 3 1 1 18 36 -7.991 -0.020 -6.645 0.629 0.266 -1.129 -0.334 D 142 140 3 143 3 0 0 17 36 -6.174 -1.687 -0.566 IL 143 143 3 143 3 1 1 21 40 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 31 ] 24 - G - - - ML 144 143 3 146 3 1 1 16 35 -7.991 -0.020 -6.645 -1.638 -2.867 1.736 -2.254 D 145 143 3 146 3 0 0 16 34 -6.174 -1.687 -0.566 IL 146 146 3 146 3 1 1 20 38 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 32 ] 25 - a - - - ML 147 146 3 149 3 1 1 15 33 -7.991 -0.020 -6.645 0.629 0.266 -1.129 -0.334 D 148 146 3 149 3 0 0 15 33 -6.174 -1.687 -0.566 IL 149 149 3 149 3 1 1 19 37 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 33 ] 26 - G - - - ML 150 149 3 152 3 1 1 13 31 -7.991 -0.020 -6.645 -1.638 -2.867 1.736 -2.254 D 151 149 3 152 3 0 0 13 32 -6.174 -1.687 -0.566 IL 152 152 3 152 3 1 1 18 36 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 34 ] 27 - A - - - ML 153 152 3 155 2 1 1 1 1 * 0.000 1.730 -2.426 -2.052 -1.973 D 154 152 3 155 2 0 0 0 0 * 0.000 IL 155 155 3 155 2 1 1 13 28 -1.823 -0.479 0.000 0.000 0.000 0.000 [ END 35 ] - - - - - - E 156 155 3 -1 0 0 0 0 0 // HMMER3/f [3.4 | Aug 2023] NAME mir-7964 ACC RF04025 DESC mir-7964 microRNA precursor family LENG 51 MAXL 134 ALPH RNA RF no MM no CONS yes CS yes MAP yes DATE Wed Jul 10 07:50:30 2024 COM [1] /hps/software/users/agb/rfam/bin/cmbuild -F CM SEED COM [2] /hps/software/users/agb/rfam/bin/cmcalibrate --cpu 8 /nfs/production/agb/rfam/15/rescan/families/RF04025/CM NSEQ 2 EFFN 1.613281 CKSUM 318974538 STATS LOCAL MSV -7.7690 0.73310 STATS LOCAL VITERBI -8.9370 0.73310 STATS LOCAL FORWARD -3.0953 0.73310 HMM A C G U m->m m->i m->d i->m i->i d->m d->d COMPO 1.65852 1.21907 1.23302 1.50210 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 0.00000 * 1 2.56998 1.62434 2.27594 0.47205 1 U - - < 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 2 0.53705 2.33940 1.52529 2.28684 2 A - - < 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 3 2.34151 2.83426 0.24446 2.78183 3 G - - < 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 4 2.81805 0.35497 2.54130 1.83059 4 C - - < 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 5 2.38505 0.32432 2.94782 2.02160 5 C - - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 6 2.34022 2.83303 0.24485 2.78002 6 G - - < 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 7 2.58948 1.40461 2.32998 0.54098 7 U - - < 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 8 2.34307 2.83576 0.24398 2.78403 8 G - - < 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 9 2.25793 2.28376 2.75751 0.31460 9 U - - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 10 2.25793 2.28376 2.75751 0.31460 10 U - - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 11 2.57591 1.62428 2.27802 0.47100 11 U - - < 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 12 2.34235 2.83507 0.24420 2.78302 12 G - - < 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 13 2.34308 2.83576 0.24398 2.78403 13 G - - < 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 14 2.33306 2.82615 0.24706 2.76998 14 G - - < 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 15 0.53737 2.33870 1.52528 2.28568 15 A - - < 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 16 2.81495 0.35548 2.54005 1.83012 16 C - - < 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 17 2.81674 0.35519 2.54077 1.83039 17 C - - < 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 18 2.81738 0.35508 2.54103 1.83049 18 C - - < 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 19 2.34182 2.83456 0.24436 2.78227 19 G - - < 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 20 2.25793 2.28376 2.75751 0.31460 20 U - - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 21 2.34157 2.83432 0.24444 2.78192 21 G - - < 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 22 0.23667 2.85568 2.61812 2.52207 22 A - - _ 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 23 0.97320 1.23871 2.10037 1.56083 23 a - - _ 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 24 2.29577 3.11081 0.24015 2.68468 24 G - - _ 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 25 0.97320 1.23871 2.10037 1.56083 25 a - - _ 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 26 2.29577 3.11081 0.24015 2.68468 26 G - - _ 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 27 0.23667 2.85568 2.61812 2.52207 27 A - - _ 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 28 2.97790 0.28850 2.65575 2.04432 28 C - - > 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 29 2.99929 0.28555 2.66419 2.04853 29 C - - > 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 30 2.10374 2.70736 0.30767 2.57535 30 G - - > 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 31 2.10400 2.70766 0.30756 2.57574 31 G - - > 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 32 2.10431 2.70801 0.30742 2.57621 32 G - - > 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 33 2.52111 1.77713 2.15685 0.45442 33 U - - > 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 34 3.00446 0.28485 2.66621 2.04954 34 C - - > 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 35 0.91467 2.28039 1.07004 1.87008 35 a - - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 36 0.23667 2.85568 2.61812 2.52207 36 A - - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 37 3.00589 0.28466 2.66677 2.04982 37 C - - > 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 38 3.00801 0.28437 2.66759 2.05023 38 C - - > 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 39 0.53515 2.45771 1.46072 2.33593 39 A - - > 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 40 2.38505 0.32432 2.94782 2.02160 40 C - - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 41 2.25793 2.28376 2.75751 0.31460 41 U - - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 42 3.00589 0.28466 2.66677 2.04982 42 C - - > 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 43 1.89524 2.50260 0.39763 2.34409 43 G - - > 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 44 3.01054 0.28403 2.66858 2.05072 44 C - - > 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 45 2.25793 2.28376 2.75751 0.31460 45 U - - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 46 2.10439 2.70810 0.30739 2.57633 46 G - - > 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 47 3.00349 0.28498 2.66583 2.04935 47 C - - > 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 48 2.52219 1.77717 2.15717 0.45421 48 U - - > 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 49 0.53545 2.45689 1.46075 2.33478 49 A - - > 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 50 2.38505 0.32432 2.94782 2.02160 50 C - - : 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 51 2.38505 0.32432 2.94782 2.02160 51 C - - : 1.38629 1.38629 1.38629 1.38629 0.02469 3.71357 * 1.46634 0.26236 0.00000 * //