INFERNAL1/a [1.1.5 | Sep 2023] NAME mir-4880 ACC RF04008 DESC mir-4880 microRNA precursor family STATES 229 NODES 52 CLEN 75 W 91 ALPH RNA RF no CONS yes MAP yes DATE Sat Jul 13 14:16:18 2024 COM [1] /hps/software/users/agb/rfam/bin/cmbuild -F CM SEED COM [2] /hps/software/users/agb/rfam/bin/cmcalibrate --cpu 8 /nfs/production/agb/rfam/15/rescan/families/RF04008/CM PBEGIN 0.05 PEND 0.05 WBETA 1e-07 QDBBETA1 1e-07 QDBBETA2 1e-15 N2OMEGA 1.52588e-05 N3OMEGA 1.52588e-05 ELSELF -0.08926734 NSEQ 2 EFFN 1.175781 CKSUM 2177163988 NULL 0.000 0.000 0.000 0.000 GA 100.00 TC 100.10 NC 98.20 EFP7GF -6.3141 0.72109 ECMLC 0.65096 -5.19789 3.44161 1600000 332374 0.003610 ECMGC 0.42192 -15.40516 -2.16443 1600000 106726 0.003748 ECMLI 0.63366 -3.81396 4.70897 1600000 265859 0.004514 ECMGI 0.48963 -9.10846 1.40887 1600000 68944 0.005802 CM [ ROOT 0 ] - - - - - - S 0 -1 0 1 4 1 1 91 111 -6.548 -7.794 -0.101 -4.247 IL 1 1 2 1 4 1 17 93 113 -2.817 -4.319 -0.613 -2.698 0.000 0.000 0.000 0.000 IR 2 2 3 2 3 1 18 93 113 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 1 ] - 75 - G - - MR 3 2 3 5 5 1 19 91 111 -6.819 -0.047 -6.634 -6.846 -7.738 -0.905 -2.005 1.503 -1.389 D 4 2 3 5 5 0 12 90 110 -5.352 -0.707 -2.978 -4.409 -2.404 IR 5 5 3 5 5 1 16 92 112 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 2 ] 1 74 u a - - MP 6 5 3 10 6 2 19 90 110 -8.985 -8.924 -0.023 -7.700 -7.980 -8.375 -3.602 -3.394 -3.500 0.262 -2.581 -4.114 1.730 -3.229 -3.513 0.633 -3.913 -1.307 2.942 -3.770 -0.272 -2.387 ML 7 5 3 10 6 1 13 89 109 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 8 5 3 10 6 1 13 89 109 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 9 5 3 10 6 0 8 86 106 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 10 10 5 10 6 1 15 90 110 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 11 11 6 11 5 1 16 90 110 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 3 ] 2 73 u g - - MP 12 11 6 16 6 2 18 88 108 -8.985 -8.924 -0.023 -7.700 -7.980 -8.375 -3.488 -3.376 -3.324 0.227 -2.291 -3.852 1.976 -2.997 -3.359 0.535 -3.716 -1.394 1.224 -3.625 2.481 -2.263 ML 13 11 6 16 6 1 13 87 107 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 14 11 6 16 6 1 12 87 107 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 15 11 6 16 6 0 8 84 104 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 16 16 5 16 6 1 15 88 108 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 17 17 6 17 5 1 15 88 108 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 4 ] 3 72 g c - - MP 18 17 6 22 6 2 16 86 106 -8.985 -8.924 -0.023 -7.700 -7.980 -8.375 -2.669 -2.226 -2.771 1.098 -2.805 -3.482 1.107 -3.068 -2.835 2.594 -3.311 -0.231 0.808 0.081 -0.681 -1.866 ML 19 17 6 22 6 1 12 85 105 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 20 17 6 22 6 1 11 85 105 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 21 17 6 22 6 0 7 83 103 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 22 22 5 22 6 1 14 86 106 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 23 23 6 23 5 1 14 86 106 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 5 ] 4 71 C G - - MP 24 23 6 28 6 2 15 84 104 -8.985 -8.924 -0.023 -7.700 -7.980 -8.375 -3.938 -3.777 -3.724 -0.076 -2.595 -4.213 3.303 -3.340 -3.760 0.279 -4.079 -1.718 0.972 -4.042 -0.293 -2.623 ML 25 23 6 28 6 1 11 83 104 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 26 23 6 28 6 1 10 83 103 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 27 23 6 28 6 0 7 81 102 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 28 28 5 28 6 1 12 84 104 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 29 29 6 29 5 1 12 84 104 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 6 ] 5 70 u g - - MP 30 29 6 34 4 2 13 82 102 -6.600 -6.807 -0.068 -5.222 -3.488 -3.376 -3.324 0.227 -2.291 -3.852 1.976 -2.997 -3.359 0.535 -3.716 -1.394 1.224 -3.625 2.481 -2.263 ML 31 29 6 34 4 1 10 82 103 -3.758 -3.940 -0.507 -2.670 0.368 -0.385 -0.191 0.094 MR 32 29 6 34 4 1 8 82 102 -4.809 -3.838 -1.706 -0.766 0.368 -0.385 -0.191 0.094 D 33 29 6 34 4 0 7 81 101 -4.568 -4.250 -2.265 -0.520 IL 34 34 5 34 4 1 12 84 104 -1.686 -2.369 -1.117 -4.855 0.000 0.000 0.000 0.000 IR 35 35 6 35 3 1 11 83 103 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 7 ] 6 - U - - - ML 36 35 6 38 3 1 12 80 100 -8.058 -0.023 -6.376 -0.923 -1.025 -1.620 1.409 D 37 35 6 38 3 0 6 79 99 -5.620 -0.734 -1.403 IL 38 38 3 38 3 1 10 81 101 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 8 ] - 69 - C - - MR 39 38 3 41 5 1 11 79 99 -6.819 -0.047 -6.634 -6.846 -7.738 -1.006 1.346 -1.792 -0.574 D 40 38 3 41 5 0 5 78 98 -5.352 -0.707 -2.978 -4.409 -2.404 IR 41 41 3 41 5 1 8 79 99 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 9 ] 7 68 G C - - MP 42 41 3 46 6 2 13 78 98 -8.985 -8.924 -0.023 -7.700 -7.980 -8.375 -4.126 -2.806 -4.188 0.593 -4.365 -4.436 0.125 -4.371 -3.896 3.446 -4.282 -0.491 -0.282 -4.057 -1.884 -3.075 ML 43 41 3 46 6 1 6 76 96 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 44 41 3 46 6 1 6 76 96 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 45 41 3 46 6 0 2 74 94 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 46 46 5 46 6 1 8 78 98 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 47 47 6 47 5 1 8 77 97 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 10 ] 8 67 g c - - MP 48 47 6 52 6 2 12 76 96 -8.985 -8.924 -0.023 -7.700 -7.980 -8.375 -3.081 0.545 -3.180 1.112 -3.439 -3.886 0.658 -3.472 -3.154 2.831 -3.607 -0.072 0.374 -3.247 -1.189 -2.178 ML 49 47 6 52 6 1 6 74 94 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 50 47 6 52 6 1 6 74 94 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 51 47 6 52 6 0 2 72 92 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 52 52 5 52 6 1 7 76 96 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 53 53 6 53 5 1 8 75 95 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 11 ] 9 66 u a - - MP 54 53 6 58 6 2 12 74 94 -8.985 -8.924 -0.023 -7.700 -7.980 -8.375 -3.602 -3.394 -3.500 0.262 -2.581 -4.114 1.730 -3.229 -3.513 0.633 -3.913 -1.307 2.942 -3.770 -0.272 -2.387 ML 55 53 6 58 6 1 6 72 92 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 56 53 6 58 6 1 6 72 92 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 57 53 6 58 6 0 2 70 90 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 58 58 5 58 6 1 7 74 94 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 59 59 6 59 5 1 7 73 93 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 12 ] 10 65 u a - - MP 60 59 6 64 6 2 11 72 92 -8.985 -8.924 -0.023 -7.700 -7.980 -8.375 -3.602 -3.394 -3.500 0.262 -2.581 -4.114 1.730 -3.229 -3.513 0.633 -3.913 -1.307 2.942 -3.770 -0.272 -2.387 ML 61 59 6 64 6 1 6 70 90 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 62 59 6 64 6 1 5 70 90 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 63 59 6 64 6 0 1 68 88 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 64 64 5 64 6 1 7 72 92 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 65 65 6 65 5 1 7 71 91 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 13 ] 11 64 u a - - MP 66 65 6 70 6 2 11 70 90 -8.985 -8.924 -0.023 -7.700 -7.980 -8.375 -3.602 -3.394 -3.500 0.262 -2.581 -4.114 1.730 -3.229 -3.513 0.633 -3.913 -1.307 2.942 -3.770 -0.272 -2.387 ML 67 65 6 70 6 1 5 68 88 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 68 65 6 70 6 1 5 68 88 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 69 65 6 70 6 0 1 66 86 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 70 70 5 70 6 1 6 70 90 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 71 71 6 71 5 1 6 69 89 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 14 ] 12 63 G C - - MP 72 71 6 76 6 2 10 68 88 -8.985 -8.924 -0.023 -7.700 -7.980 -8.375 -4.126 -2.806 -4.188 0.593 -4.365 -4.436 0.125 -4.371 -3.896 3.446 -4.282 -0.491 -0.282 -4.057 -1.884 -3.075 ML 73 71 6 76 6 1 5 66 86 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 74 71 6 76 6 1 5 66 86 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 75 71 6 76 6 0 1 64 84 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 76 76 5 76 6 1 6 68 87 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 77 77 6 77 5 1 6 67 87 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 15 ] 13 62 C G - - MP 78 77 6 82 6 2 10 66 86 -8.985 -8.924 -0.023 -7.700 -7.980 -8.375 -3.938 -3.777 -3.724 -0.076 -2.595 -4.213 3.303 -3.340 -3.760 0.279 -4.079 -1.718 0.972 -4.042 -0.293 -2.623 ML 79 77 6 82 6 1 5 64 84 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 80 77 6 82 6 1 4 64 84 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 81 77 6 82 6 0 1 62 82 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 82 82 5 82 6 1 6 66 85 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 83 83 6 83 5 1 6 65 85 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 16 ] 14 61 u a - - MP 84 83 6 88 6 2 9 64 84 -8.985 -8.924 -0.023 -7.700 -7.980 -8.375 -3.602 -3.394 -3.500 0.262 -2.581 -4.114 1.730 -3.229 -3.513 0.633 -3.913 -1.307 2.942 -3.770 -0.272 -2.387 ML 85 83 6 88 6 1 4 62 82 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 86 83 6 88 6 1 4 62 82 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 87 83 6 88 6 0 0 60 80 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 88 88 5 88 6 1 5 64 83 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 89 89 6 89 5 1 6 63 83 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 17 ] 15 60 a u - - MP 90 89 6 94 6 2 8 62 82 -8.985 -8.924 -0.023 -7.700 -7.980 -8.375 -3.329 -2.489 -3.373 2.907 -3.484 -4.518 0.791 -3.438 -3.291 1.588 -3.814 -0.052 0.368 -3.781 -1.155 -2.240 ML 91 89 6 94 6 1 4 61 80 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 92 89 6 94 6 1 3 60 80 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 93 89 6 94 6 0 0 58 78 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 94 94 5 94 6 1 5 62 82 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 95 95 6 95 5 1 5 61 81 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 18 ] 16 59 u a - - MP 96 95 6 100 6 2 7 60 80 -8.985 -8.924 -0.023 -7.700 -7.980 -8.375 -3.602 -3.394 -3.500 0.262 -2.581 -4.114 1.730 -3.229 -3.513 0.633 -3.913 -1.307 2.942 -3.770 -0.272 -2.387 ML 97 95 6 100 6 1 3 59 79 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 98 95 6 100 6 1 2 59 79 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 99 95 6 100 6 0 0 57 77 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 100 100 5 100 6 1 4 60 80 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 101 101 6 101 5 1 4 59 79 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 19 ] 17 58 u a - - MP 102 101 6 106 4 2 5 58 78 -6.600 -6.807 -0.068 -5.222 -3.602 -3.394 -3.500 0.262 -2.581 -4.114 1.730 -3.229 -3.513 0.633 -3.913 -1.307 2.942 -3.770 -0.272 -2.387 ML 103 101 6 106 4 1 2 58 78 -3.758 -3.940 -0.507 -2.670 0.368 -0.385 -0.191 0.094 MR 104 101 6 106 4 1 1 58 78 -4.809 -3.838 -1.706 -0.766 0.368 -0.385 -0.191 0.094 D 105 101 6 106 4 0 0 57 77 -4.568 -4.250 -2.265 -0.520 IL 106 106 5 106 4 1 4 59 80 -1.686 -2.369 -1.117 -4.855 0.000 0.000 0.000 0.000 IR 107 107 6 107 3 1 3 59 79 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 20 ] 18 - u - - - ML 108 107 6 110 3 1 4 56 75 -7.645 -0.026 -6.299 -0.462 0.333 -1.207 0.661 D 109 107 6 110 3 0 0 54 74 -6.174 -1.687 -0.566 IL 110 110 3 110 3 1 3 57 77 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 21 ] 19 - G - - - ML 111 110 3 113 3 1 3 54 74 -7.645 -0.026 -6.299 -0.905 -2.005 1.503 -1.389 D 112 110 3 113 3 0 0 53 73 -6.174 -1.687 -0.566 IL 113 113 3 113 3 1 2 56 76 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 22 ] 20 - A - - - ML 114 113 3 116 3 1 3 53 73 -8.058 -0.023 -6.376 1.539 -1.743 -1.437 -1.230 D 115 113 3 116 3 0 0 52 72 -5.620 -0.734 -1.403 IL 116 116 3 116 3 1 1 54 74 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 23 ] - 57 - C - - MR 117 116 3 119 3 1 2 52 72 -8.058 -0.023 -6.376 -1.006 1.346 -1.792 -0.574 D 118 116 3 119 3 0 0 51 70 -6.390 -1.568 -0.620 IR 119 119 3 119 3 1 1 53 73 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 24 ] - 56 - A - - MR 120 119 3 122 3 1 2 51 71 -8.058 -0.023 -6.376 1.539 -1.743 -1.437 -1.230 D 121 119 3 122 3 0 0 50 69 -6.390 -1.568 -0.620 IR 122 122 3 122 3 1 1 52 72 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 25 ] - 55 - A - - MR 123 122 3 125 5 1 1 50 70 -6.819 -0.047 -6.634 -6.846 -7.738 1.539 -1.743 -1.437 -1.230 D 124 122 3 125 5 0 0 49 69 -5.352 -0.707 -2.978 -4.409 -2.404 IR 125 125 3 125 5 1 1 51 70 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 26 ] 21 54 u a - - MP 126 125 3 130 6 2 3 49 69 -8.985 -8.924 -0.023 -7.700 -7.980 -8.375 -3.602 -3.394 -3.500 0.262 -2.581 -4.114 1.730 -3.229 -3.513 0.633 -3.913 -1.307 2.942 -3.770 -0.272 -2.387 ML 127 125 3 130 6 1 1 48 67 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 128 125 3 130 6 1 1 48 67 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 129 125 3 130 6 0 0 45 65 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 130 130 5 130 6 1 1 49 69 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 131 131 6 131 5 1 1 49 68 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 27 ] 22 53 G C - - MP 132 131 6 136 6 2 2 47 67 -8.985 -8.924 -0.023 -7.700 -7.980 -8.375 -4.126 -2.806 -4.188 0.593 -4.365 -4.436 0.125 -4.371 -3.896 3.446 -4.282 -0.491 -0.282 -4.057 -1.884 -3.075 ML 133 131 6 136 6 1 1 46 65 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 134 131 6 136 6 1 1 46 65 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 135 131 6 136 6 0 0 43 63 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 136 136 5 136 6 1 1 47 67 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 137 137 6 137 5 1 1 47 66 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 28 ] 23 52 a u - - MP 138 137 6 142 6 2 2 45 65 -8.985 -8.924 -0.023 -7.700 -7.980 -8.375 -3.329 -2.489 -3.373 2.907 -3.484 -4.518 0.791 -3.438 -3.291 1.588 -3.814 -0.052 0.368 -3.781 -1.155 -2.240 ML 139 137 6 142 6 1 1 44 63 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 140 137 6 142 6 1 1 44 63 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 141 137 6 142 6 0 0 41 61 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 142 142 5 142 6 1 1 45 65 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 143 143 6 143 5 1 1 45 64 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 29 ] 24 51 C G - - MP 144 143 6 148 6 2 2 43 63 -8.985 -8.924 -0.023 -7.700 -7.980 -8.375 -3.938 -3.777 -3.724 -0.076 -2.595 -4.213 3.303 -3.340 -3.760 0.279 -4.079 -1.718 0.972 -4.042 -0.293 -2.623 ML 145 143 6 148 6 1 1 42 62 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 146 143 6 148 6 1 1 42 62 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 147 143 6 148 6 0 0 40 59 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 148 148 5 148 6 1 1 43 63 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 149 149 6 149 5 1 1 43 62 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 30 ] 25 50 C G - - MP 150 149 6 154 6 2 2 41 61 -8.985 -8.924 -0.023 -7.700 -7.980 -8.375 -3.938 -3.777 -3.724 -0.076 -2.595 -4.213 3.303 -3.340 -3.760 0.279 -4.079 -1.718 0.972 -4.042 -0.293 -2.623 ML 151 149 6 154 6 1 1 41 60 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 152 149 6 154 6 1 1 40 60 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 153 149 6 154 6 0 0 39 58 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 154 154 5 154 6 1 1 41 61 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 155 155 6 155 5 1 1 41 60 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 31 ] 26 49 a u - - MP 156 155 6 160 4 2 2 39 59 -6.600 -6.807 -0.068 -5.222 -3.329 -2.489 -3.373 2.907 -3.484 -4.518 0.791 -3.438 -3.291 1.588 -3.814 -0.052 0.368 -3.781 -1.155 -2.240 ML 157 155 6 160 4 1 1 40 59 -3.758 -3.940 -0.507 -2.670 0.368 -0.385 -0.191 0.094 MR 158 155 6 160 4 1 1 39 59 -4.809 -3.838 -1.706 -0.766 0.368 -0.385 -0.191 0.094 D 159 155 6 160 4 0 0 38 58 -4.568 -4.250 -2.265 -0.520 IL 160 160 5 160 4 1 1 41 61 -1.686 -2.369 -1.117 -4.855 0.000 0.000 0.000 0.000 IR 161 161 6 161 3 1 1 40 60 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 32 ] 27 - G - - - ML 162 161 6 164 3 1 1 37 56 -8.058 -0.023 -6.376 -0.905 -2.005 1.503 -1.389 D 163 161 6 164 3 0 0 36 55 -5.620 -0.734 -1.403 IL 164 164 3 164 3 1 1 38 57 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 33 ] - 48 - G - - MR 165 164 3 167 5 1 1 36 55 -6.819 -0.047 -6.634 -6.846 -7.738 -0.905 -2.005 1.503 -1.389 D 166 164 3 167 5 0 0 35 54 -5.352 -0.707 -2.978 -4.409 -2.404 IR 167 167 3 167 5 1 1 36 56 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 34 ] 28 47 u a - - MP 168 167 3 172 6 2 2 35 54 -8.985 -8.924 -0.023 -7.700 -7.980 -8.375 -3.602 -3.394 -3.500 0.262 -2.581 -4.114 1.730 -3.229 -3.513 0.633 -3.913 -1.307 2.942 -3.770 -0.272 -2.387 ML 169 167 3 172 6 1 1 34 53 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 170 167 3 172 6 1 1 33 53 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 171 167 3 172 6 0 0 31 51 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 172 172 5 172 6 1 1 35 54 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 173 173 6 173 5 1 1 34 54 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 35 ] 29 46 G C - - MP 174 173 6 178 6 2 2 33 52 -8.985 -8.924 -0.023 -7.700 -7.980 -8.375 -4.126 -2.806 -4.188 0.593 -4.365 -4.436 0.125 -4.371 -3.896 3.446 -4.282 -0.491 -0.282 -4.057 -1.884 -3.075 ML 175 173 6 178 6 1 1 32 52 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 176 173 6 178 6 1 1 32 51 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 177 173 6 178 6 0 0 30 50 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 178 178 5 178 6 1 1 33 52 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 179 179 6 179 5 1 1 32 52 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 36 ] 30 45 G C - - MP 180 179 6 184 4 2 2 31 50 -6.600 -6.807 -0.068 -5.222 -4.126 -2.806 -4.188 0.593 -4.365 -4.436 0.125 -4.371 -3.896 3.446 -4.282 -0.491 -0.282 -4.057 -1.884 -3.075 ML 181 179 6 184 4 1 1 31 51 -3.758 -3.940 -0.507 -2.670 0.368 -0.385 -0.191 0.094 MR 182 179 6 184 4 1 1 31 50 -4.809 -3.838 -1.706 -0.766 0.368 -0.385 -0.191 0.094 D 183 179 6 184 4 0 0 30 49 -4.568 -4.250 -2.265 -0.520 IL 184 184 5 184 4 1 1 33 52 -1.686 -2.369 -1.117 -4.855 0.000 0.000 0.000 0.000 IR 185 185 6 185 3 1 1 32 51 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 37 ] 31 - U - - - ML 186 185 6 188 3 1 1 28 47 -7.645 -0.026 -6.299 -0.923 -1.025 -1.620 1.409 D 187 185 6 188 3 0 0 27 46 -6.174 -1.687 -0.566 IL 188 188 3 188 3 1 1 30 50 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 38 ] 32 - C - - - ML 189 188 3 191 3 1 1 27 46 -7.645 -0.026 -6.299 -1.006 1.346 -1.792 -0.574 D 190 188 3 191 3 0 0 26 45 -6.174 -1.687 -0.566 IL 191 191 3 191 3 1 1 29 49 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 39 ] 33 - A - - - ML 192 191 3 194 3 1 1 26 45 -7.645 -0.026 -6.299 1.539 -1.743 -1.437 -1.230 D 193 191 3 194 3 0 0 25 44 -6.174 -1.687 -0.566 IL 194 194 3 194 3 1 1 28 48 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 40 ] 34 - u - - - ML 195 194 3 197 3 1 1 25 44 -7.645 -0.026 -6.299 0.507 -0.707 -0.889 0.512 D 196 194 3 197 3 0 0 24 43 -6.174 -1.687 -0.566 IL 197 197 3 197 3 1 1 27 47 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 41 ] 35 - U - - - ML 198 197 3 200 3 1 1 24 43 -7.645 -0.026 -6.299 -0.923 -1.025 -1.620 1.409 D 199 197 3 200 3 0 0 23 42 -6.174 -1.687 -0.566 IL 200 200 3 200 3 1 1 26 45 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 42 ] 36 - U - - - ML 201 200 3 203 3 1 1 23 41 -7.645 -0.026 -6.299 -0.923 -1.025 -1.620 1.409 D 202 200 3 203 3 0 0 21 40 -6.174 -1.687 -0.566 IL 203 203 3 203 3 1 1 25 44 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 43 ] 37 - U - - - ML 204 203 3 206 3 1 1 21 40 -7.645 -0.342 -2.278 -0.923 -1.025 -1.620 1.409 D 205 203 3 206 3 0 0 20 39 -6.174 -1.687 -0.566 IL 206 206 3 206 3 1 1 24 43 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 44 ] 38 - c - - - ML 207 206 3 209 3 1 1 20 39 -7.335 -0.032 -5.989 -0.414 0.911 -1.150 -0.123 D 208 206 3 209 3 0 0 19 38 -7.457 -2.970 -0.206 IL 209 209 3 209 3 1 1 23 42 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 45 ] 39 - A - - - ML 210 209 3 212 3 1 1 19 38 -7.335 -0.032 -5.989 1.256 -1.181 -0.922 -0.637 D 211 209 3 212 3 0 0 18 37 -7.457 -0.481 -1.849 IL 212 212 3 212 3 1 1 22 41 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 46 ] 40 - a - - - ML 213 212 3 215 3 1 1 18 36 -7.645 -0.026 -6.299 0.639 -1.137 0.380 -0.542 D 214 212 3 215 3 0 0 17 36 -6.174 -1.687 -0.566 IL 215 215 3 215 3 1 1 21 40 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 47 ] 41 - A - - - ML 216 215 3 218 3 1 1 16 35 -7.645 -0.026 -6.299 1.539 -1.743 -1.437 -1.230 D 217 215 3 218 3 0 0 16 34 -6.174 -1.687 -0.566 IL 218 218 3 218 3 1 1 20 38 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 48 ] 42 - A - - - ML 219 218 3 221 3 1 1 15 34 -7.645 -0.026 -6.299 1.539 -1.743 -1.437 -1.230 D 220 218 3 221 3 0 0 15 33 -6.174 -1.687 -0.566 IL 221 221 3 221 3 1 1 19 37 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 49 ] 43 - A - - - ML 222 221 3 224 3 1 1 13 32 -7.645 -0.026 -6.299 1.539 -1.743 -1.437 -1.230 D 223 221 3 224 3 0 0 13 32 -6.174 -1.687 -0.566 IL 224 224 3 224 3 1 1 18 36 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 50 ] 44 - C - - - ML 225 224 3 227 2 1 1 1 1 * 0.000 -1.006 1.346 -1.792 -0.574 D 226 224 3 227 2 0 0 0 0 * 0.000 IL 227 227 3 227 2 1 1 13 28 -1.823 -0.479 0.000 0.000 0.000 0.000 [ END 51 ] - - - - - - E 228 227 3 -1 0 0 0 0 0 // HMMER3/f [3.4 | Aug 2023] NAME mir-4880 ACC RF04008 DESC mir-4880 microRNA precursor family LENG 75 MAXL 166 ALPH RNA RF no MM no CONS yes CS yes MAP yes DATE Sat Jul 13 14:16:18 2024 COM [1] /hps/software/users/agb/rfam/bin/cmbuild -F CM SEED COM [2] /hps/software/users/agb/rfam/bin/cmcalibrate --cpu 8 /nfs/production/agb/rfam/15/rescan/families/RF04008/CM NSEQ 2 EFFN 1.777344 CKSUM 2177163988 STATS LOCAL MSV -8.0922 0.72109 STATS LOCAL VITERBI -9.5071 0.72109 STATS LOCAL FORWARD -3.2929 0.72109 HMM A C G U m->m m->i m->d i->m i->i d->m d->d COMPO 1.36909 1.44695 1.36397 1.36755 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 0.00000 * 1 2.65336 1.68364 2.37371 0.42962 1 U - - < 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 2 2.66759 1.44297 2.42369 0.50127 2 U - - < 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 3 1.87774 2.03268 0.72548 1.46107 3 g - - < 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 4 2.90462 0.32379 2.64216 1.89298 4 C - - < 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 5 2.67193 1.44275 2.42544 0.50060 5 U - - < 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 6 2.34104 2.35184 2.84555 0.28705 6 U - - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 7 2.39790 2.93254 0.22374 2.87688 7 G - - < 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 8 1.34253 2.40279 0.60685 2.27027 8 G - - < 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 9 2.66598 1.68375 2.37846 0.42756 9 U - - < 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 10 2.66603 1.68375 2.37847 0.42755 10 U - - < 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 11 2.66572 1.68375 2.37836 0.42760 11 U - - < 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 12 2.40009 2.93477 0.22312 2.88009 12 G - - < 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 13 2.90596 0.32359 2.64273 1.89319 13 C - - < 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 14 2.66449 1.68374 2.37790 0.42780 14 U - - < 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 15 0.48317 2.43656 1.59336 2.38082 15 A - - < 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 16 2.66386 1.68373 2.37766 0.42790 16 U - - < 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 17 2.66362 1.68373 2.37757 0.42794 17 U - - < 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 18 1.84290 1.08171 2.37805 0.89185 18 u - - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 19 2.39440 3.22613 0.21284 2.80057 19 G - - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 20 0.21345 2.94778 2.70095 2.62270 20 A - - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 21 2.66187 1.68372 2.37691 0.42823 21 U - - < 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 22 2.39979 2.93446 0.22321 2.87964 22 G - - < 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 23 0.48295 2.43712 1.59340 2.38171 23 A - - < 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 24 2.90741 0.32337 2.64335 1.89342 24 C - - < 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 25 2.90703 0.32343 2.64318 1.89336 25 C - - < 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 26 0.48303 2.43692 1.59338 2.38140 26 A - - < 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 27 2.39440 3.22613 0.21284 2.80057 27 G - - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 28 2.66229 1.68372 2.37707 0.42816 28 U - - < 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 29 2.39996 2.93464 0.22316 2.87990 29 G - - < 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 30 2.40059 2.93528 0.22298 2.88082 30 G - - < 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 31 2.34104 2.35184 2.84555 0.28705 31 U - - _ 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 32 2.49445 0.28872 3.06201 2.10831 32 C - - _ 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 33 0.21345 2.94778 2.70095 2.62270 33 A - - _ 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 34 1.00934 1.95362 2.09501 0.99233 34 u - - _ 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 35 2.34104 2.35184 2.84555 0.28705 35 U - - _ 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 36 2.34104 2.35184 2.84555 0.28705 36 U - - _ 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 37 2.34104 2.35184 2.84555 0.28705 37 U - - _ 1.38629 1.38629 1.38629 1.38629 0.33210 3.73767 1.35181 1.46634 0.26236 1.09861 0.40547 38 1.88280 0.57642 2.41205 1.62811 38 C - - _ 1.38629 1.38629 1.38629 1.38629 0.06427 3.46984 3.46984 1.46634 0.26236 2.55478 0.08090 39 0.39863 2.40994 2.21515 2.04175 39 A - - _ 1.38629 1.38629 1.38629 1.38629 0.06427 3.46984 3.46984 1.46634 0.26236 0.16891 1.86163 40 0.90490 2.31877 1.05296 1.90974 40 a - - _ 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 41 0.21345 2.94778 2.70095 2.62270 41 A - - _ 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 42 0.21345 2.94778 2.70095 2.62270 42 A - - _ 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 43 0.21345 2.94778 2.70095 2.62270 43 A - - _ 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 44 2.49445 0.28872 3.06201 2.10831 44 C - - _ 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 45 3.10010 0.26089 2.76747 2.10563 45 C - - > 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 46 3.10268 0.26057 2.76851 2.10613 46 C - - > 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 47 0.48571 2.55920 1.52047 2.42175 47 A - - > 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 48 2.39440 3.22613 0.21284 2.80057 48 G - - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 49 2.61183 1.85481 2.25195 0.40808 49 U - - > 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 50 2.16803 2.81015 0.28003 2.66444 50 G - - > 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 51 2.16852 2.81074 0.27984 2.66520 51 G - - > 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 52 2.61464 1.85499 2.25285 0.40759 52 U - - > 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 53 3.10247 0.26060 2.76843 2.10609 53 C - - > 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 54 0.48573 2.55914 1.52047 2.42167 54 A - - > 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 55 0.21345 2.94778 2.70095 2.62270 55 A - - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 56 0.21345 2.94778 2.70095 2.62270 56 A - - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 57 2.49445 0.28872 3.06201 2.10831 57 C - - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 58 0.48686 2.55564 1.52046 2.41692 58 A - - > 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 59 0.48683 2.55576 1.52046 2.41708 59 A - - > 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 60 2.61033 1.85471 2.25148 0.40835 60 U - - > 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 61 0.48672 2.55609 1.52046 2.41753 61 A - - > 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 62 2.16732 2.80930 0.28031 2.66333 62 G - - > 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 63 3.09493 0.26152 2.76538 2.10463 63 C - - > 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 64 0.48646 2.55690 1.52046 2.41863 64 A - - > 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 65 0.48633 2.55730 1.52046 2.41918 65 A - - > 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 66 0.48617 2.55780 1.52046 2.41985 66 A - - > 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 67 2.50277 0.48523 2.21536 1.64262 67 C - - > 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 68 3.10586 0.26019 2.76979 2.10675 68 C - - > 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 69 2.49445 0.28872 3.06201 2.10831 69 C - - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 70 1.94542 2.59810 0.36534 2.42253 70 G - - > 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 71 2.16768 2.80974 0.28016 2.66390 71 G - - > 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 72 2.15620 0.63189 1.84587 1.63598 72 C - - > 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 73 1.94631 2.59921 0.36486 2.42395 73 G - - > 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 74 0.48614 2.55788 1.52046 2.41997 74 A - - > 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 75 2.39440 3.22613 0.21284 2.80057 75 G - - : 1.38629 1.38629 1.38629 1.38629 0.02469 3.71357 * 1.46634 0.26236 0.00000 * //