INFERNAL1/a [1.1.5 | Sep 2023] NAME mir-7918 ACC RF04001 DESC mir-7918 microRNA precursor family STATES 178 NODES 42 CLEN 58 W 73 ALPH RNA RF no CONS yes MAP yes DATE Sat Jul 6 20:31:06 2024 COM [1] /hps/software/users/agb/rfam/bin/cmbuild -F CM SEED COM [2] /hps/software/users/agb/rfam/bin/cmcalibrate --cpu 8 /nfs/production/agb/rfam/15/rescan/families/RF04001/CM PBEGIN 0.05 PEND 0.05 WBETA 1e-07 QDBBETA1 1e-07 QDBBETA2 1e-15 N2OMEGA 1.52588e-05 N3OMEGA 1.52588e-05 ELSELF -0.08926734 NSEQ 6 EFFN 2.206055 CKSUM 1075975077 NULL 0.000 0.000 0.000 0.000 GA 80.00 TC 80.70 NC 78.50 EFP7GF -9.6299 0.71933 ECMLC 0.69232 -5.07339 3.75240 1600000 540532 0.002220 ECMGC 0.45599 -13.62931 -0.20845 1600000 181911 0.002199 ECMLI 0.65973 -3.81712 4.69574 1600000 329808 0.003638 ECMGI 0.49619 -8.80309 2.76087 1600000 124170 0.003221 CM [ ROOT 0 ] - - - - - - S 0 -1 0 1 4 1 1 73 93 -7.057 -7.264 -0.049 -5.678 IL 1 1 2 1 4 1 8 77 97 -1.686 -2.369 -1.117 -4.855 0.000 0.000 0.000 0.000 IR 2 2 3 2 3 1 8 76 96 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 1 ] 1 - A - - - ML 3 2 3 5 3 1 8 73 93 -8.066 -0.019 -6.720 1.760 -2.578 -2.189 -2.141 D 4 2 3 5 3 0 3 72 92 -6.174 -1.687 -0.566 IL 5 5 3 5 3 1 7 75 95 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 2 ] 2 - U - - - ML 6 5 3 8 3 1 8 72 92 -8.066 -0.019 -6.720 -1.676 -1.639 -2.419 1.669 D 7 5 3 8 3 0 2 71 91 -6.174 -1.687 -0.566 IL 8 8 3 8 3 1 7 74 94 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 3 ] 3 - U - - - ML 9 8 3 11 3 1 7 71 91 -8.066 -0.019 -6.720 -1.676 -1.639 -2.419 1.669 D 10 8 3 11 3 0 2 70 90 -6.174 -1.687 -0.566 IL 11 11 3 11 3 1 6 73 93 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 4 ] 4 - u - - - ML 12 11 3 14 3 1 6 70 90 -8.450 -0.017 -6.768 -0.481 -0.939 -0.151 0.896 D 13 11 3 14 3 0 1 69 88 -5.620 -0.734 -1.403 IL 14 14 3 14 3 1 5 71 90 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 5 ] - 58 - G - - MR 15 14 3 17 3 1 6 69 89 -8.450 -0.017 -6.768 -1.797 -3.049 1.768 -2.437 D 16 14 3 17 3 0 1 68 87 -6.390 -1.568 -0.620 IR 17 17 3 17 3 1 4 70 89 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 6 ] - 57 - U - - MR 18 17 3 20 3 1 5 68 88 -8.450 -0.017 -6.768 -1.676 -1.639 -2.419 1.669 D 19 17 3 20 3 0 0 67 86 -6.390 -1.568 -0.620 IR 20 20 3 20 3 1 4 69 88 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 7 ] - 56 - U - - MR 21 20 3 23 3 1 5 67 87 -8.450 -0.017 -6.768 -0.995 -0.440 -1.741 1.300 D 22 20 3 23 3 0 0 66 85 -6.390 -1.568 -0.620 IR 23 23 3 23 3 1 3 68 87 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 8 ] - 55 - U - - MR 24 23 3 26 3 1 4 66 86 -8.450 -0.017 -6.768 -1.676 -1.639 -2.419 1.669 D 25 23 3 26 3 0 0 65 84 -6.390 -1.568 -0.620 IR 26 26 3 26 3 1 2 67 86 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 9 ] - 54 - U - - MR 27 26 3 29 5 1 4 65 85 -7.182 -0.037 -6.998 -7.210 -8.102 -1.676 -1.639 -2.419 1.669 D 28 26 3 29 5 0 0 64 83 -5.352 -0.707 -2.978 -4.409 -2.404 IR 29 29 3 29 5 1 2 66 85 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 10 ] 5 53 g c - - MP 30 29 3 34 6 2 5 64 84 -9.150 -9.089 -0.020 -7.866 -8.146 -8.541 -3.431 -2.422 -3.466 1.909 -4.030 -4.371 0.335 -3.795 -3.501 2.608 -3.958 1.338 0.068 -3.609 -1.586 -2.382 ML 31 29 3 34 6 1 1 63 82 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 32 29 3 34 6 1 1 63 82 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 33 29 3 34 6 0 0 60 80 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 34 34 5 34 6 1 1 64 83 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 35 35 6 35 5 1 2 63 83 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 11 ] 6 52 G C - - MP 36 35 6 40 6 2 5 62 82 -9.150 -9.089 -0.020 -7.866 -8.146 -8.541 -4.944 -3.191 -5.065 0.064 -5.517 -4.772 -0.832 -5.320 -4.458 3.683 -4.781 -0.899 -1.211 -4.600 -2.880 -3.939 ML 37 35 6 40 6 1 1 61 80 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 38 35 6 40 6 1 1 61 80 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 39 35 6 40 6 0 0 58 78 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 40 40 5 40 6 1 1 62 81 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 41 41 6 41 5 1 1 61 81 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 12 ] 7 51 C G - - MP 42 41 6 46 6 2 4 60 80 -9.150 -9.089 -0.020 -7.866 -8.146 -8.541 -4.774 -4.700 -4.426 -0.912 -3.096 -4.808 3.615 -3.928 -4.483 -0.702 -4.719 -2.650 0.395 -4.828 -0.808 -3.315 ML 43 41 6 46 6 1 1 59 78 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 44 41 6 46 6 1 1 59 78 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 45 41 6 46 6 0 0 56 76 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 46 46 5 46 6 1 1 60 79 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 47 47 6 47 5 1 1 59 79 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 13 ] 8 50 U A - - MP 48 47 6 52 6 2 4 58 78 -9.150 -9.089 -0.020 -7.866 -8.146 -8.541 -4.433 -4.263 -4.244 -0.541 -3.135 -4.785 1.198 -3.847 -4.246 -0.321 -4.608 -2.154 3.432 -4.574 -0.806 -3.045 ML 49 47 6 52 6 1 1 57 76 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 50 47 6 52 6 1 1 57 76 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 51 47 6 52 6 0 0 54 74 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 52 52 5 52 6 1 1 58 77 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 53 53 6 53 5 1 1 57 77 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 14 ] 9 49 C G - - MP 54 53 6 58 6 2 4 56 76 -9.150 -9.089 -0.020 -7.866 -8.146 -8.541 -4.774 -4.700 -4.426 -0.912 -3.096 -4.808 3.615 -3.928 -4.483 -0.702 -4.719 -2.650 0.395 -4.828 -0.808 -3.315 ML 55 53 6 58 6 1 1 55 74 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 56 53 6 58 6 1 1 55 74 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 57 53 6 58 6 0 0 52 72 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 58 58 5 58 6 1 1 56 75 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 59 59 6 59 5 1 1 55 75 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 15 ] 10 48 U A - - MP 60 59 6 64 6 2 4 54 74 -9.150 -9.089 -0.020 -7.866 -8.146 -8.541 -4.433 -4.263 -4.244 -0.541 -3.135 -4.785 1.198 -3.847 -4.246 -0.321 -4.608 -2.154 3.432 -4.574 -0.806 -3.045 ML 61 59 6 64 6 1 1 53 72 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 62 59 6 64 6 1 1 53 72 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 63 59 6 64 6 0 0 50 70 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 64 64 5 64 6 1 1 54 73 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 65 65 6 65 5 1 1 53 73 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 16 ] 11 47 G C - - MP 66 65 6 70 6 2 3 52 72 -9.150 -9.089 -0.020 -7.866 -8.146 -8.541 -4.086 -0.383 -4.114 0.628 -4.726 -4.431 -0.235 -4.536 -4.008 3.415 -4.369 -0.491 -0.513 -3.937 -2.187 -3.072 ML 67 65 6 70 6 1 1 51 70 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 68 65 6 70 6 1 1 51 70 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 69 65 6 70 6 0 0 48 68 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 70 70 5 70 6 1 1 52 71 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 71 71 6 71 5 1 1 51 71 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 17 ] 12 46 a u - - MP 72 71 6 76 6 2 3 50 70 -9.150 -9.089 -0.020 -7.866 -8.146 -8.541 -3.141 0.231 -3.249 2.871 -3.633 -4.361 0.345 -3.491 -3.210 1.552 -3.749 -0.079 0.103 -3.553 -1.448 -2.207 ML 73 71 6 76 6 1 1 49 68 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 74 71 6 76 6 1 1 49 68 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 75 71 6 76 6 0 0 47 66 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 76 76 5 76 6 1 1 50 69 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 77 77 6 77 5 1 1 49 69 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 18 ] 13 45 A U - - MP 78 77 6 82 6 2 3 48 68 -9.150 -9.089 -0.020 -7.866 -8.146 -8.541 -3.978 -2.963 -3.982 3.440 -4.415 -5.496 -0.102 -4.011 -3.867 0.877 -4.424 -0.410 -0.519 -4.652 -2.042 -2.805 ML 79 77 6 82 6 1 1 47 67 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 80 77 6 82 6 1 1 47 67 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 81 77 6 82 6 0 0 45 65 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 82 82 5 82 6 1 1 48 67 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 83 83 6 83 5 1 1 48 67 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 19 ] 14 44 A U - - MP 84 83 6 88 4 2 2 46 66 -7.057 -7.264 -0.049 -5.678 -3.537 -2.558 -3.631 3.074 -4.259 -5.037 -0.012 -3.796 -3.501 1.374 -4.064 1.015 -0.264 -4.118 -1.905 -2.465 ML 85 83 6 88 4 1 1 47 66 -3.758 -3.940 -0.507 -2.670 0.368 -0.385 -0.191 0.094 MR 86 83 6 88 4 1 1 46 66 -4.809 -3.838 -1.706 -0.766 0.368 -0.385 -0.191 0.094 D 87 83 6 88 4 0 0 45 65 -4.568 -4.250 -2.265 -0.520 IL 88 88 5 88 4 1 1 48 68 -1.686 -2.369 -1.117 -4.855 0.000 0.000 0.000 0.000 IR 89 89 6 89 3 1 1 47 67 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 20 ] 15 - U - - - ML 90 89 6 92 5 1 1 44 63 -7.182 -0.037 -6.998 -7.210 -8.102 -1.676 -1.639 -2.419 1.669 D 91 89 6 92 5 0 0 42 62 -4.959 -0.803 -4.221 -2.596 -2.508 IL 92 92 3 92 5 1 1 44 63 -2.408 -0.496 -4.087 -5.920 -5.193 0.000 0.000 0.000 0.000 [ MATP 21 ] 16 43 C G - - MP 93 92 3 97 6 2 2 43 62 -9.150 -9.089 -0.020 -7.866 -8.146 -8.541 -4.774 -4.700 -4.426 -0.912 -3.096 -4.808 3.615 -3.928 -4.483 -0.702 -4.719 -2.650 0.395 -4.828 -0.808 -3.315 ML 94 92 3 97 6 1 1 41 60 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 95 92 3 97 6 1 1 41 60 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 96 92 3 97 6 0 0 39 58 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 97 97 5 97 6 1 1 42 62 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 98 98 6 98 5 1 1 42 61 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 22 ] 17 42 U A - - MP 99 98 6 103 6 2 2 41 60 -9.150 -9.089 -0.020 -7.866 -8.146 -8.541 -4.433 -4.263 -4.244 -0.541 -3.135 -4.785 1.198 -3.847 -4.246 -0.321 -4.608 -2.154 3.432 -4.574 -0.806 -3.045 ML 100 98 6 103 6 1 1 39 58 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 101 98 6 103 6 1 1 39 58 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 102 98 6 103 6 0 0 37 56 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 103 103 5 103 6 1 1 40 60 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 104 104 6 104 5 1 1 40 59 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 23 ] 18 41 U A - - MP 105 104 6 109 6 2 2 39 58 -9.150 -9.089 -0.020 -7.866 -8.146 -8.541 -4.433 -4.263 -4.244 -0.541 -3.135 -4.785 1.198 -3.847 -4.246 -0.321 -4.608 -2.154 3.432 -4.574 -0.806 -3.045 ML 106 104 6 109 6 1 1 37 56 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 107 104 6 109 6 1 1 37 56 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 108 104 6 109 6 0 0 35 54 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 109 109 5 109 6 1 1 38 58 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 110 110 6 110 5 1 1 38 57 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 24 ] 19 40 G C - - MP 111 110 6 115 6 2 2 37 56 -9.150 -9.089 -0.020 -7.866 -8.146 -8.541 -4.944 -3.191 -5.065 0.064 -5.517 -4.772 -0.832 -5.320 -4.458 3.683 -4.781 -0.899 -1.211 -4.600 -2.880 -3.939 ML 112 110 6 115 6 1 1 35 55 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 113 110 6 115 6 1 1 35 54 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 114 110 6 115 6 0 0 33 52 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 115 115 5 115 6 1 1 36 56 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 116 116 6 116 5 1 1 36 55 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 25 ] 20 39 c g - - MP 117 116 6 121 6 2 2 35 54 -9.150 -9.089 -0.020 -7.866 -8.146 -8.541 -3.882 -3.870 -3.703 -0.149 -2.556 -4.210 2.970 -3.303 -3.726 0.050 -4.081 -1.908 1.047 -3.997 1.582 -2.597 ML 118 116 6 121 6 1 1 33 53 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 119 116 6 121 6 1 1 33 53 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 120 116 6 121 6 0 0 31 51 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 121 121 5 121 6 1 1 34 54 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 122 122 6 122 5 1 1 34 53 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 26 ] 21 38 u a - - MP 123 122 6 127 6 2 2 33 52 -9.150 -9.089 -0.020 -7.866 -8.146 -8.541 -3.761 -3.727 -3.667 -0.052 -2.677 -4.261 1.636 -3.370 -3.684 0.169 -4.089 -1.763 2.992 -3.921 0.720 -2.565 ML 124 122 6 127 6 1 1 32 51 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 125 122 6 127 6 1 1 32 51 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 126 122 6 127 6 0 0 30 50 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 127 127 5 127 6 1 1 33 52 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 128 128 6 128 5 1 1 32 51 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 27 ] 22 37 G C - - MP 129 128 6 133 4 2 2 31 50 -7.057 -7.264 -0.049 -5.678 -4.944 -3.191 -5.065 0.064 -5.517 -4.772 -0.832 -5.320 -4.458 3.683 -4.781 -0.899 -1.211 -4.600 -2.880 -3.939 ML 130 128 6 133 4 1 1 31 51 -3.758 -3.940 -0.507 -2.670 0.368 -0.385 -0.191 0.094 MR 131 128 6 133 4 1 1 31 50 -4.809 -3.838 -1.706 -0.766 0.368 -0.385 -0.191 0.094 D 132 128 6 133 4 0 0 30 49 -4.568 -4.250 -2.265 -0.520 IL 133 133 5 133 4 1 1 33 52 -1.686 -2.369 -1.117 -4.855 0.000 0.000 0.000 0.000 IR 134 134 6 134 3 1 1 32 51 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 28 ] 23 - U - - - ML 135 134 6 137 5 1 1 28 47 -7.182 -0.037 -6.998 -7.210 -8.102 -1.676 -1.639 -2.419 1.669 D 136 134 6 137 5 0 0 27 46 -4.959 -0.803 -4.221 -2.596 -2.508 IL 137 137 3 137 5 1 1 29 48 -2.408 -0.496 -4.087 -5.920 -5.193 0.000 0.000 0.000 0.000 [ MATP 29 ] 24 36 G C - - MP 138 137 3 142 4 2 2 27 46 -7.057 -7.264 -0.049 -5.678 -4.944 -3.191 -5.065 0.064 -5.517 -4.772 -0.832 -5.320 -4.458 3.683 -4.781 -0.899 -1.211 -4.600 -2.880 -3.939 ML 139 137 3 142 4 1 1 28 47 -3.758 -3.940 -0.507 -2.670 0.368 -0.385 -0.191 0.094 MR 140 137 3 142 4 1 1 27 47 -4.809 -3.838 -1.706 -0.766 0.368 -0.385 -0.191 0.094 D 141 137 3 142 4 0 0 26 46 -4.568 -4.250 -2.265 -0.520 IL 142 142 5 142 4 1 1 29 48 -1.686 -2.369 -1.117 -4.855 0.000 0.000 0.000 0.000 IR 143 143 6 143 3 1 1 28 47 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 30 ] 25 - U - - - ML 144 143 6 146 3 1 1 24 43 -8.066 -0.019 -6.720 -0.686 -0.998 -0.764 1.195 D 145 143 6 146 3 0 0 23 42 -6.174 -1.687 -0.566 IL 146 146 3 146 3 1 1 27 46 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 31 ] 26 - g - - - ML 147 146 3 149 3 1 1 23 42 -8.066 -0.019 -6.720 0.014 -0.677 0.746 -0.539 D 148 146 3 149 3 0 0 22 41 -6.174 -1.687 -0.566 IL 149 149 3 149 3 1 1 26 45 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 32 ] 27 - c - - - ML 150 149 3 152 3 1 1 22 41 -8.066 -0.306 -2.416 0.024 0.262 -0.548 0.137 D 151 149 3 152 3 0 0 21 40 -6.174 -1.687 -0.566 IL 152 152 3 152 3 1 1 25 44 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 33 ] 28 - A - - - ML 153 152 3 155 3 1 1 21 40 -7.783 -0.023 -6.437 1.628 -2.010 -1.678 -1.519 D 154 152 3 155 3 0 0 20 39 -7.642 -0.414 -2.033 IL 155 155 3 155 3 1 1 24 43 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 34 ] 29 - U - - - ML 156 155 3 158 3 1 1 20 39 -8.066 -0.019 -6.720 -0.331 -1.010 -1.468 1.231 D 157 155 3 158 3 0 0 19 38 -6.174 -1.687 -0.566 IL 158 158 3 158 3 1 1 23 42 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 35 ] 30 - U - - - ML 159 158 3 161 3 1 1 19 37 -8.066 -0.019 -6.720 -1.676 -1.639 -2.419 1.669 D 160 158 3 161 3 0 0 18 37 -6.174 -1.687 -0.566 IL 161 161 3 161 3 1 1 22 41 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 36 ] 31 - g - - - ML 162 161 3 164 3 1 1 17 36 -8.066 -0.019 -6.720 -0.404 0.248 0.369 -0.387 D 163 161 3 164 3 0 0 17 36 -6.174 -1.687 -0.566 IL 164 164 3 164 3 1 1 21 40 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 37 ] 32 - A - - - ML 165 164 3 167 3 1 1 16 35 -8.066 -0.019 -6.720 1.760 -2.578 -2.189 -2.141 D 166 164 3 167 3 0 0 16 34 -6.174 -1.687 -0.566 IL 167 167 3 167 3 1 1 20 38 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 38 ] 33 - A - - - ML 168 167 3 170 3 1 1 15 33 -8.066 -0.019 -6.720 1.760 -2.578 -2.189 -2.141 D 169 167 3 170 3 0 0 15 33 -6.174 -1.687 -0.566 IL 170 170 3 170 3 1 1 19 37 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 39 ] 34 - A - - - ML 171 170 3 173 3 1 1 13 31 -8.066 -0.019 -6.720 1.270 -1.304 -1.321 -0.352 D 172 170 3 173 3 0 0 13 32 -6.174 -1.687 -0.566 IL 173 173 3 173 3 1 1 18 36 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 40 ] 35 - U - - - ML 174 173 3 176 2 1 1 1 1 * 0.000 -1.676 -1.639 -2.419 1.669 D 175 173 3 176 2 0 0 0 0 * 0.000 IL 176 176 3 176 2 1 1 13 28 -1.823 -0.479 0.000 0.000 0.000 0.000 [ END 41 ] - - - - - - E 177 176 3 -1 0 0 0 0 0 // HMMER3/f [3.4 | Aug 2023] NAME mir-7918 ACC RF04001 DESC mir-7918 microRNA precursor family LENG 58 MAXL 138 ALPH RNA RF no MM no CONS yes CS yes MAP yes DATE Sat Jul 6 20:31:07 2024 COM [1] /hps/software/users/agb/rfam/bin/cmbuild -F CM SEED COM [2] /hps/software/users/agb/rfam/bin/cmcalibrate --cpu 8 /nfs/production/agb/rfam/15/rescan/families/RF04001/CM NSEQ 6 EFFN 3.096680 CKSUM 1075975077 STATS LOCAL MSV -8.1615 0.71933 STATS LOCAL VITERBI -8.4810 0.71933 STATS LOCAL FORWARD -3.5323 0.71933 HMM A C G U m->m m->i m->d i->m i->i d->m d->d COMPO 1.46501 1.59282 1.45794 1.10004 1.38629 1.38629 1.38629 1.38629 0.03579 4.04116 4.04116 1.46634 0.26236 0.00000 * 1 0.10843 3.57239 3.26512 3.31096 1 A - - : 1.38629 1.38629 1.38629 1.38629 0.03579 4.04116 4.04116 1.46634 0.26236 1.09861 0.40547 2 2.92695 2.83813 3.45522 0.15511 2 U - - : 1.38629 1.38629 1.38629 1.38629 0.03579 4.04116 4.04116 1.46634 0.26236 1.09861 0.40547 3 2.92695 2.83813 3.45522 0.15511 3 U - - : 1.38629 1.38629 1.38629 1.38629 0.03579 4.04116 4.04116 1.46634 0.26236 1.09861 0.40547 4 1.84688 2.16475 1.47325 0.69653 4 u - - : 1.38629 1.38629 1.38629 1.38629 0.03579 4.04116 4.04116 1.46634 0.26236 1.09861 0.40547 5 1.30920 2.61584 0.56003 2.45729 5 G - - < 1.38629 1.38629 1.38629 1.38629 0.03579 4.04116 4.04116 1.46634 0.26236 1.09861 0.40547 6 2.80343 3.57299 0.12616 3.51138 6 G - - < 1.38629 1.38629 1.38629 1.38629 0.03579 4.04116 4.04116 1.46634 0.26236 1.09861 0.40547 7 3.54585 0.16947 3.35944 2.38283 7 C - - < 1.38629 1.38629 1.38629 1.38629 0.03579 4.04116 4.04116 1.46634 0.26236 1.09861 0.40547 8 3.36952 2.20918 3.16086 0.20652 8 U - - < 1.38629 1.38629 1.38629 1.38629 0.03579 4.04116 4.04116 1.46634 0.26236 1.09861 0.40547 9 3.54273 0.16971 3.35782 2.38225 9 C - - < 1.38629 1.38629 1.38629 1.38629 0.03579 4.04116 4.04116 1.46634 0.26236 1.09861 0.40547 10 3.36692 2.20895 3.15956 0.20672 10 U - - < 1.38629 1.38629 1.38629 1.38629 0.03579 4.04116 4.04116 1.46634 0.26236 1.09861 0.40547 11 1.94368 3.09948 0.27407 2.96673 11 G - - < 1.38629 1.38629 1.38629 1.38629 0.03579 4.04116 4.04116 1.46634 0.26236 1.09861 0.40547 12 0.42186 2.75231 1.59275 2.56362 12 A - - < 1.38629 1.38629 1.38629 1.38629 0.03579 4.04116 4.04116 1.46634 0.26236 1.09861 0.40547 13 0.22832 3.19207 2.13568 3.10385 13 A - - < 1.38629 1.38629 1.38629 1.38629 0.03579 4.04116 4.04116 1.46634 0.26236 1.09861 0.40547 14 0.47067 3.04407 1.31186 2.83947 14 A - - < 1.38629 1.38629 1.38629 1.38629 0.03579 4.04116 4.04116 1.46634 0.26236 1.09861 0.40547 15 2.92695 2.83813 3.45522 0.15511 15 U - - - 1.38629 1.38629 1.38629 1.38629 0.03579 4.04116 4.04116 1.46634 0.26236 1.09861 0.40547 16 3.54979 0.16917 3.36150 2.38356 16 C - - < 1.38629 1.38629 1.38629 1.38629 0.03579 4.04116 4.04116 1.46634 0.26236 1.09861 0.40547 17 3.37140 2.20935 3.16179 0.20636 17 U - - < 1.38629 1.38629 1.38629 1.38629 0.03579 4.04116 4.04116 1.46634 0.26236 1.09861 0.40547 18 3.36937 2.20917 3.16078 0.20653 18 U - - < 1.38629 1.38629 1.38629 1.38629 0.03579 4.04116 4.04116 1.46634 0.26236 1.09861 0.40547 19 2.80153 3.57044 0.12649 3.50790 19 G - - < 1.38629 1.38629 1.38629 1.38629 0.03579 4.04116 4.04116 1.46634 0.26236 1.09861 0.40547 20 2.90991 0.60501 2.70279 1.10133 20 C - - < 1.38629 1.38629 1.38629 1.38629 0.03579 4.04116 4.04116 1.46634 0.26236 1.09861 0.40547 21 2.82966 1.70209 2.61138 0.37800 21 U - - < 1.38629 1.38629 1.38629 1.38629 0.03579 4.04116 4.04116 1.46634 0.26236 1.09861 0.40547 22 2.79982 3.56814 0.12679 3.50477 22 G - - < 1.38629 1.38629 1.38629 1.38629 0.03579 4.04116 4.04116 1.46634 0.26236 1.09861 0.40547 23 2.92695 2.83813 3.45522 0.15511 23 U - - - 1.38629 1.38629 1.38629 1.38629 0.03579 4.04116 4.04116 1.46634 0.26236 1.09861 0.40547 24 2.80488 3.57495 0.12591 3.51405 24 G - - < 1.38629 1.38629 1.38629 1.38629 0.03579 4.04116 4.04116 1.46634 0.26236 1.09861 0.40547 25 2.04140 2.24230 1.97368 0.47001 25 U - - _ 1.38629 1.38629 1.38629 1.38629 0.03579 4.04116 4.04116 1.46634 0.26236 1.09861 0.40547 26 1.43559 1.88585 0.77440 1.90150 26 g - - _ 1.38629 1.38629 1.38629 1.38629 0.03579 4.04116 4.04116 1.46634 0.26236 1.09861 0.40547 27 1.39642 1.15044 1.77842 1.32007 27 c - - _ 1.38629 1.38629 1.38629 1.38629 0.26980 4.04116 1.51917 1.46634 0.26236 1.09861 0.40547 28 0.17856 3.10918 2.84613 2.79981 28 A - - _ 1.38629 1.38629 1.38629 1.38629 0.04501 3.81637 3.81637 1.46634 0.26236 0.14894 1.97779 29 1.69883 2.25299 2.59521 0.45038 29 U - - _ 1.38629 1.38629 1.38629 1.38629 0.03579 4.04116 4.04116 1.46634 0.26236 1.09861 0.40547 30 2.92695 2.83813 3.45522 0.15511 30 U - - _ 1.38629 1.38629 1.38629 1.38629 0.03579 4.04116 4.04116 1.46634 0.26236 1.09861 0.40547 31 1.80400 1.14865 1.04532 1.79147 31 g - - _ 1.38629 1.38629 1.38629 1.38629 0.03579 4.04116 4.04116 1.46634 0.26236 1.09861 0.40547 32 0.10843 3.57239 3.26512 3.31096 32 A - - _ 1.38629 1.38629 1.38629 1.38629 0.03579 4.04116 4.04116 1.46634 0.26236 1.09861 0.40547 33 0.10843 3.57239 3.26512 3.31096 33 A - - _ 1.38629 1.38629 1.38629 1.38629 0.03579 4.04116 4.04116 1.46634 0.26236 1.09861 0.40547 34 0.43664 2.44546 2.47368 1.69917 34 A - - _ 1.38629 1.38629 1.38629 1.38629 0.03579 4.04116 4.04116 1.46634 0.26236 1.09861 0.40547 35 2.92695 2.83813 3.45522 0.15511 35 U - - _ 1.38629 1.38629 1.38629 1.38629 0.03579 4.04116 4.04116 1.46634 0.26236 1.09861 0.40547 36 3.66547 0.15301 3.40014 2.48994 36 C - - > 1.38629 1.38629 1.38629 1.38629 0.03579 4.04116 4.04116 1.46634 0.26236 1.09861 0.40547 37 3.68487 0.15172 3.40940 2.49362 37 C - - > 1.38629 1.38629 1.38629 1.38629 0.03579 4.04116 4.04116 1.46634 0.26236 1.09861 0.40547 38 0.54708 2.77713 1.25658 2.59668 38 A - - > 1.38629 1.38629 1.38629 1.38629 0.03579 4.04116 4.04116 1.46634 0.26236 1.09861 0.40547 39 2.09123 2.86371 0.28737 2.67113 39 G - - > 1.38629 1.38629 1.38629 1.38629 0.03579 4.04116 4.04116 1.46634 0.26236 1.09861 0.40547 40 3.68538 0.15169 3.40964 2.49372 40 C - - > 1.38629 1.38629 1.38629 1.38629 0.03579 4.04116 4.04116 1.46634 0.26236 1.09861 0.40547 41 0.23480 3.34683 2.04480 3.10840 41 A - - > 1.38629 1.38629 1.38629 1.38629 0.03579 4.04116 4.04116 1.46634 0.26236 1.09861 0.40547 42 0.23510 3.34460 2.04445 3.10591 42 A - - > 1.38629 1.38629 1.38629 1.38629 0.03579 4.04116 4.04116 1.46634 0.26236 1.09861 0.40547 43 2.65371 3.51127 0.14783 3.29204 43 G - - > 1.38629 1.38629 1.38629 1.38629 0.03579 4.04116 4.04116 1.46634 0.26236 1.09861 0.40547 44 3.04558 1.99796 2.83743 0.27675 44 U - - > 1.38629 1.38629 1.38629 1.38629 0.03579 4.04116 4.04116 1.46634 0.26236 1.09861 0.40547 45 3.32218 2.46830 2.99998 0.18704 45 U - - > 1.38629 1.38629 1.38629 1.38629 0.03579 4.04116 4.04116 1.46634 0.26236 1.09861 0.40547 46 2.77933 1.41221 2.54859 0.48431 46 U - - > 1.38629 1.38629 1.38629 1.38629 0.03579 4.04116 4.04116 1.46634 0.26236 1.09861 0.40547 47 3.19028 0.24798 2.91982 2.08330 47 C - - > 1.38629 1.38629 1.38629 1.38629 0.03579 4.04116 4.04116 1.46634 0.26236 1.09861 0.40547 48 0.23441 3.34981 2.04527 3.11174 48 A - - > 1.38629 1.38629 1.38629 1.38629 0.03579 4.04116 4.04116 1.46634 0.26236 1.09861 0.40547 49 2.66276 3.52497 0.14596 3.30769 49 G - - > 1.38629 1.38629 1.38629 1.38629 0.03579 4.04116 4.04116 1.46634 0.26236 1.09861 0.40547 50 0.23407 3.35236 2.04566 3.11460 50 A - - > 1.38629 1.38629 1.38629 1.38629 0.03579 4.04116 4.04116 1.46634 0.26236 1.09861 0.40547 51 2.66548 3.52911 0.14540 3.31242 51 G - - > 1.38629 1.38629 1.38629 1.38629 0.03579 4.04116 4.04116 1.46634 0.26236 1.09861 0.40547 52 3.71015 0.15009 3.42132 2.49833 52 C - - > 1.38629 1.38629 1.38629 1.38629 0.03579 4.04116 4.04116 1.46634 0.26236 1.09861 0.40547 53 2.70379 0.91100 2.42460 0.81551 53 u - - > 1.38629 1.38629 1.38629 1.38629 0.03579 4.04116 4.04116 1.46634 0.26236 1.09861 0.40547 54 2.92695 2.83813 3.45522 0.15511 54 U - - : 1.38629 1.38629 1.38629 1.38629 0.03579 4.04116 4.04116 1.46634 0.26236 1.09861 0.40547 55 2.92695 2.83813 3.45522 0.15511 55 U - - : 1.38629 1.38629 1.38629 1.38629 0.03579 4.04116 4.04116 1.46634 0.26236 1.09861 0.40547 56 2.29881 1.73898 2.82386 0.40865 56 U - - : 1.38629 1.38629 1.38629 1.38629 0.03579 4.04116 4.04116 1.46634 0.26236 1.09861 0.40547 57 2.92695 2.83813 3.45522 0.15511 57 U - - : 1.38629 1.38629 1.38629 1.38629 0.03579 4.04116 4.04116 1.46634 0.26236 1.09861 0.40547 58 3.03443 3.95371 0.10173 3.52524 58 G - - : 1.38629 1.38629 1.38629 1.38629 0.01805 4.02343 * 1.46634 0.26236 0.00000 * //