INFERNAL1/a [1.1.5 | Sep 2023] NAME mir-7957 ACC RF03995 DESC mir-7957 microRNA precursor family STATES 181 NODES 45 CLEN 59 W 74 ALPH RNA RF no CONS yes MAP yes DATE Tue Jul 9 07:59:10 2024 COM [1] /hps/software/users/agb/rfam/bin/cmbuild -F CM SEED COM [2] /hps/software/users/agb/rfam/bin/cmcalibrate --cpu 8 /nfs/production/agb/rfam/15/rescan/families/RF03995/CM PBEGIN 0.05 PEND 0.05 WBETA 1e-07 QDBBETA1 1e-07 QDBBETA2 1e-15 N2OMEGA 1.52588e-05 N3OMEGA 1.52588e-05 ELSELF -0.08926734 NSEQ 4 EFFN 2.175781 CKSUM 2819481707 NULL 0.000 0.000 0.000 0.000 GA 76.00 TC 76.60 NC 66.20 EFP7GF -9.8130 0.71928 ECMLC 0.68798 -4.11075 4.36182 1600000 408014 0.002941 ECMGC 0.46128 -12.28704 1.25858 1600000 206861 0.001934 ECMLI 0.61596 -3.46941 5.42087 1600000 286695 0.004186 ECMGI 0.49868 -7.79493 4.08534 1600000 149621 0.002673 CM [ ROOT 0 ] - - - - - - S 0 -1 0 1 4 1 1 74 94 -7.045 -7.253 -0.274 -2.656 IL 1 1 2 1 4 1 10 78 98 -1.686 -2.369 -1.117 -4.855 0.000 0.000 0.000 0.000 IR 2 2 3 2 3 1 9 77 97 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 1 ] 1 - A - - - ML 3 2 3 5 3 1 9 74 94 -7.855 -0.022 -6.509 1.667 -2.152 -1.806 -1.674 D 4 2 3 5 3 0 4 72 92 -7.361 -2.874 -0.222 IL 5 5 3 5 3 1 9 76 96 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 2 ] 2 - a - - - ML 6 5 3 8 3 1 9 73 93 -8.253 -0.020 -6.570 0.988 -1.310 0.020 -0.739 D 7 5 3 8 3 0 4 72 91 -6.449 -0.366 -2.232 IL 8 8 3 8 3 1 7 74 93 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 3 ] - 59 - U - - MR 9 8 3 11 3 1 8 72 92 -8.440 -0.018 -6.757 -1.656 -1.622 -2.397 1.664 D 10 8 3 11 3 0 2 71 90 -6.390 -1.568 -0.620 IR 11 11 3 11 3 1 6 73 92 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 4 ] - 58 - A - - MR 12 11 3 14 5 1 8 71 91 -7.173 -0.037 -6.988 -7.201 -8.092 1.756 -2.556 -2.169 -2.116 D 13 11 3 14 5 0 1 70 89 -5.352 -0.707 -2.978 -4.409 -2.404 IR 14 14 3 14 5 1 5 71 91 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 5 ] 3 57 U A - - MP 15 14 3 19 6 2 9 70 90 -9.145 -9.085 -0.021 -7.861 -8.141 -8.536 -4.407 -4.237 -4.221 -0.517 -3.118 -4.765 1.215 -3.828 -4.224 -0.293 -4.586 -2.129 3.422 -4.549 -0.788 -3.025 ML 16 14 3 19 6 1 3 69 88 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 17 14 3 19 6 1 3 68 88 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 18 14 3 19 6 0 0 66 86 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 19 19 5 19 6 1 4 70 89 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 20 20 6 20 5 1 5 69 89 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 6 ] 4 56 U A - - MP 21 20 6 25 6 2 9 68 88 -9.145 -9.085 -0.021 -7.861 -8.141 -8.536 -4.407 -4.237 -4.221 -0.517 -3.118 -4.765 1.215 -3.828 -4.224 -0.293 -4.586 -2.129 3.422 -4.549 -0.788 -3.025 ML 22 20 6 25 6 1 3 67 86 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 23 20 6 25 6 1 3 66 86 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 24 20 6 25 6 0 0 64 84 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 25 25 5 25 6 1 4 68 87 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 26 26 6 26 5 1 4 67 87 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 7 ] 5 55 u g - - MP 27 26 6 31 6 2 8 66 86 -9.145 -9.085 -0.021 -7.861 -8.141 -8.536 -3.756 -3.755 -3.603 -0.120 -2.533 -4.129 1.748 -3.261 -3.638 0.084 -4.003 -1.848 1.920 -3.890 2.499 -2.538 ML 28 26 6 31 6 1 3 65 84 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 29 26 6 31 6 1 3 64 84 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 30 26 6 31 6 0 0 62 82 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 31 31 5 31 6 1 4 66 85 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 32 32 6 32 5 1 4 65 85 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 8 ] 6 54 G C - - MP 33 32 6 37 6 2 8 64 84 -9.145 -9.085 -0.021 -7.861 -8.141 -8.536 -4.923 -3.181 -5.042 0.078 -5.488 -4.764 -0.807 -5.296 -4.444 3.679 -4.769 -0.887 -1.188 -4.586 -2.855 -3.915 ML 34 32 6 37 6 1 2 63 82 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 35 32 6 37 6 1 2 62 82 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 36 32 6 37 6 0 0 60 80 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 37 37 5 37 6 1 3 64 83 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 38 38 6 38 5 1 4 63 83 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 9 ] 7 53 U A - - MP 39 38 6 43 6 2 7 62 82 -9.145 -9.085 -0.021 -7.861 -8.141 -8.536 -4.407 -4.237 -4.221 -0.517 -3.118 -4.765 1.215 -3.828 -4.224 -0.293 -4.586 -2.129 3.422 -4.549 -0.788 -3.025 ML 40 38 6 43 6 1 2 61 80 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 41 38 6 43 6 1 2 60 80 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 42 38 6 43 6 0 0 58 78 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 43 43 5 43 6 1 3 62 81 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 44 44 6 44 5 1 3 61 81 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 10 ] 8 52 C G - - MP 45 44 6 49 6 2 7 60 80 -9.145 -9.085 -0.021 -7.861 -8.141 -8.536 -4.751 -4.674 -4.406 -0.889 -3.081 -4.792 3.609 -3.911 -4.463 -0.675 -4.701 -2.624 0.412 -4.806 -0.793 -3.296 ML 46 44 6 49 6 1 2 59 78 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 47 44 6 49 6 1 2 58 78 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 48 44 6 49 6 0 0 56 76 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 49 49 5 49 6 1 3 60 79 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 50 50 6 50 5 1 3 59 79 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 11 ] 9 51 C G - - MP 51 50 6 55 6 2 7 58 78 -9.145 -9.085 -0.021 -7.861 -8.141 -8.536 -4.751 -4.674 -4.406 -0.889 -3.081 -4.792 3.609 -3.911 -4.463 -0.675 -4.701 -2.624 0.412 -4.806 -0.793 -3.296 ML 52 50 6 55 6 1 2 57 76 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 53 50 6 55 6 1 2 56 76 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 54 50 6 55 6 0 0 54 74 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 55 55 5 55 6 1 3 58 77 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 56 56 6 56 5 1 3 57 77 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 12 ] 10 50 U A - - MP 57 56 6 61 6 2 6 56 76 -9.145 -9.085 -0.021 -7.861 -8.141 -8.536 -4.407 -4.237 -4.221 -0.517 -3.118 -4.765 1.215 -3.828 -4.224 -0.293 -4.586 -2.129 3.422 -4.549 -0.788 -3.025 ML 58 56 6 61 6 1 2 55 74 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 59 56 6 61 6 1 2 54 74 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 60 56 6 61 6 0 0 52 72 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 61 61 5 61 6 1 2 56 75 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 62 62 6 62 5 1 2 55 75 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 13 ] 11 49 u g - - MP 63 62 6 67 6 2 6 54 74 -9.145 -9.085 -0.021 -7.861 -8.141 -8.536 -3.786 -3.785 -3.622 -0.148 -2.537 -4.139 1.744 -3.270 -3.659 0.057 -4.018 -1.878 1.866 -3.914 2.549 -2.556 ML 64 62 6 67 6 1 1 53 72 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 65 62 6 67 6 1 1 53 72 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 66 62 6 67 6 0 0 50 70 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 67 67 5 67 6 1 2 54 73 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 68 68 6 68 5 1 2 53 73 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 14 ] 12 48 G C - - MP 69 68 6 73 6 2 6 52 72 -9.145 -9.085 -0.021 -7.861 -8.141 -8.536 -4.070 -2.738 -4.097 0.738 -4.794 -4.576 -0.207 -4.463 -3.975 3.312 -4.366 0.934 -0.489 -4.027 -2.191 -2.992 ML 70 68 6 73 6 1 1 51 70 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 71 68 6 73 6 1 1 51 70 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 72 68 6 73 6 0 0 48 68 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 73 73 5 73 6 1 2 52 71 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 74 74 6 74 5 1 2 51 71 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 15 ] 13 47 G C - - MP 75 74 6 79 6 2 4 50 70 -9.145 -9.085 -0.021 -7.861 -8.141 -8.536 -4.923 -3.181 -5.042 0.078 -5.488 -4.764 -0.807 -5.296 -4.444 3.679 -4.769 -0.887 -1.188 -4.586 -2.855 -3.915 ML 76 74 6 79 6 1 1 49 69 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 77 74 6 79 6 1 1 49 69 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 78 74 6 79 6 0 0 47 67 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 79 79 5 79 6 1 2 50 69 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 80 80 6 80 5 1 2 50 69 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 16 ] 14 46 U G - - MP 81 80 6 85 4 2 3 48 68 -7.045 -7.253 -0.050 -5.667 -4.281 -4.209 -3.940 -0.526 -2.640 -4.333 1.651 -3.430 -3.982 -0.365 -4.254 -2.205 0.776 -4.348 3.118 -2.844 ML 82 80 6 85 4 1 1 49 68 -3.758 -3.940 -0.507 -2.670 0.368 -0.385 -0.191 0.094 MR 83 80 6 85 4 1 1 48 68 -4.809 -3.838 -1.706 -0.766 0.368 -0.385 -0.191 0.094 D 84 80 6 85 4 0 0 47 67 -4.568 -4.250 -2.265 -0.520 IL 85 85 5 85 4 1 1 50 70 -1.686 -2.369 -1.117 -4.855 0.000 0.000 0.000 0.000 IR 86 86 6 86 3 1 1 49 69 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 17 ] 15 - u - - - ML 87 86 6 89 3 1 2 46 65 -8.055 -0.019 -6.709 -0.779 0.478 -1.565 0.754 D 88 86 6 89 3 0 0 44 64 -6.174 -1.687 -0.566 IL 89 89 3 89 3 1 1 48 67 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 18 ] 16 - A - - - ML 90 89 3 92 3 1 2 45 64 -8.055 -0.019 -6.709 1.114 -1.141 -1.206 -0.077 D 91 89 3 92 3 0 0 43 63 -6.174 -1.687 -0.566 IL 92 92 3 92 3 1 1 47 66 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 19 ] 17 - u - - - ML 93 92 3 95 3 1 1 44 63 -8.055 -0.019 -6.709 0.105 -0.143 -1.104 0.635 D 94 92 3 95 3 0 0 42 62 -6.174 -1.687 -0.566 IL 95 95 3 95 3 1 1 46 65 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 20 ] 18 - A - - - ML 96 95 3 98 3 1 1 42 62 -8.440 -0.018 -6.757 1.756 -2.556 -2.169 -2.116 D 97 95 3 98 3 0 0 41 60 -5.620 -0.734 -1.403 IL 98 98 3 98 3 1 1 43 62 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 21 ] - 45 - U - - MR 99 98 3 101 3 1 1 41 61 -8.440 -0.018 -6.757 -1.656 -1.622 -2.397 1.664 D 100 98 3 101 3 0 0 40 59 -6.390 -1.568 -0.620 IR 101 101 3 101 3 1 1 42 61 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 22 ] - 44 - U - - MR 102 101 3 104 3 1 1 40 60 -8.440 -0.018 -6.757 -1.656 -1.622 -2.397 1.664 D 103 101 3 104 3 0 0 39 58 -6.390 -1.568 -0.620 IR 104 104 3 104 3 1 1 41 60 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 23 ] - 43 - U - - MR 105 104 3 107 3 1 1 39 59 -8.440 -0.430 -1.973 -1.656 -1.622 -2.397 1.664 D 106 104 3 107 3 0 0 38 57 -6.390 -1.568 -0.620 IR 107 107 3 107 3 1 1 40 60 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 24 ] - 42 - A - - MR 108 107 3 110 5 1 1 39 58 -6.796 -0.048 -6.611 -6.823 -7.715 1.519 -1.691 -1.391 -1.175 D 109 107 3 110 5 0 0 37 57 -6.500 -0.277 -4.126 -5.557 -3.552 IR 110 110 3 110 5 1 1 39 58 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 25 ] 19 41 U A - - MP 111 110 3 115 6 2 2 38 57 -9.145 -9.085 -0.021 -7.861 -8.141 -8.536 -4.407 -4.237 -4.221 -0.517 -3.118 -4.765 1.215 -3.828 -4.224 -0.293 -4.586 -2.129 3.422 -4.549 -0.788 -3.025 ML 112 110 3 115 6 1 1 36 55 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 113 110 3 115 6 1 1 36 55 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 114 110 3 115 6 0 0 34 53 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 115 115 5 115 6 1 1 37 57 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 116 116 6 116 5 1 1 37 56 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 26 ] 20 40 U A - - MP 117 116 6 121 6 2 2 36 55 -9.145 -9.085 -0.021 -7.861 -8.141 -8.536 -4.407 -4.237 -4.221 -0.517 -3.118 -4.765 1.215 -3.828 -4.224 -0.293 -4.586 -2.129 3.422 -4.549 -0.788 -3.025 ML 118 116 6 121 6 1 1 34 54 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 119 116 6 121 6 1 1 34 53 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 120 116 6 121 6 0 0 32 51 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 121 121 5 121 6 1 1 35 55 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 122 122 6 122 5 1 1 35 54 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 27 ] 21 39 g c - - MP 123 122 6 127 6 2 2 34 53 -9.145 -9.085 -0.021 -7.861 -8.141 -8.536 -3.546 -2.469 -3.555 1.667 -4.154 -4.351 0.291 -3.923 -3.615 2.884 -4.043 0.974 0.018 -3.626 -1.651 -2.478 ML 124 122 6 127 6 1 1 33 52 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 125 122 6 127 6 1 1 33 52 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 126 122 6 127 6 0 0 31 50 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 127 127 5 127 6 1 1 33 53 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 128 128 6 128 5 1 1 33 52 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 28 ] 22 38 C G - - MP 129 128 6 133 4 2 2 32 51 -7.045 -7.253 -0.050 -5.667 -4.751 -4.674 -4.406 -0.889 -3.081 -4.792 3.609 -3.911 -4.463 -0.675 -4.701 -2.624 0.412 -4.806 -0.793 -3.296 ML 130 128 6 133 4 1 1 32 52 -3.758 -3.940 -0.507 -2.670 0.368 -0.385 -0.191 0.094 MR 131 128 6 133 4 1 1 32 51 -4.809 -3.838 -1.706 -0.766 0.368 -0.385 -0.191 0.094 D 132 128 6 133 4 0 0 31 50 -4.568 -4.250 -2.265 -0.520 IL 133 133 5 133 4 1 1 34 53 -1.686 -2.369 -1.117 -4.855 0.000 0.000 0.000 0.000 IR 134 134 6 134 3 1 1 33 52 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 29 ] 23 - U - - - ML 135 134 6 137 3 1 1 29 48 -8.055 -0.019 -6.709 -1.656 -1.622 -2.397 1.664 D 136 134 6 137 3 0 0 28 47 -6.174 -1.687 -0.566 IL 137 137 3 137 3 1 1 31 51 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 30 ] 24 - G - - - ML 138 137 3 140 3 1 1 28 47 -8.055 -0.019 -6.709 -1.774 -3.023 1.764 -2.411 D 139 137 3 140 3 0 0 27 46 -6.174 -1.687 -0.566 IL 140 140 3 140 3 1 1 30 50 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 31 ] 25 - U - - - ML 141 140 3 143 3 1 1 27 46 -8.055 -0.019 -6.709 -1.656 -1.622 -2.397 1.664 D 142 140 3 143 3 0 0 26 45 -6.174 -1.687 -0.566 IL 143 143 3 143 3 1 1 29 49 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 32 ] 26 - U - - - ML 144 143 3 146 3 1 1 26 45 -8.055 -0.019 -6.709 -1.656 -1.622 -2.397 1.664 D 145 143 3 146 3 0 0 25 44 -6.174 -1.687 -0.566 IL 146 146 3 146 3 1 1 28 47 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 33 ] 27 - U - - - ML 147 146 3 149 3 1 1 25 43 -8.055 -0.019 -6.709 -0.531 -0.941 -0.357 1.004 D 148 146 3 149 3 0 0 24 43 -6.174 -1.687 -0.566 IL 149 149 3 149 3 1 1 27 46 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 34 ] 28 - U - - - ML 150 149 3 152 3 1 1 23 42 -8.055 -0.019 -6.709 -0.531 -0.941 -0.357 1.004 D 151 149 3 152 3 0 0 22 41 -6.174 -1.687 -0.566 IL 152 152 3 152 3 1 1 26 45 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 35 ] 29 - U - - - ML 153 152 3 155 3 1 1 22 41 -8.055 -0.019 -6.709 -1.656 -1.622 -2.397 1.664 D 154 152 3 155 3 0 0 21 40 -6.174 -1.687 -0.566 IL 155 155 3 155 3 1 1 25 44 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 36 ] 30 - U - - - ML 156 155 3 158 3 1 1 21 40 -8.055 -0.019 -6.709 -1.656 -1.622 -2.397 1.664 D 157 155 3 158 3 0 0 20 39 -6.174 -1.687 -0.566 IL 158 158 3 158 3 1 1 24 43 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 37 ] 31 - G - - - ML 159 158 3 161 3 1 1 20 39 -8.055 -0.019 -6.709 -0.589 -1.329 1.011 -0.117 D 160 158 3 161 3 0 0 19 38 -6.174 -1.687 -0.566 IL 161 161 3 161 3 1 1 23 42 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 38 ] 32 - U - - - ML 162 161 3 164 3 1 1 19 37 -8.055 -0.019 -6.709 -1.656 -1.622 -2.397 1.664 D 163 161 3 164 3 0 0 18 37 -6.174 -1.687 -0.566 IL 164 164 3 164 3 1 1 22 41 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 39 ] 33 - U - - - ML 165 164 3 167 3 1 1 17 36 -8.055 -0.019 -6.709 -1.656 -1.622 -2.397 1.664 D 166 164 3 167 3 0 0 17 36 -6.174 -1.687 -0.566 IL 167 167 3 167 3 1 1 21 40 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 40 ] 34 - A - - - ML 168 167 3 170 3 1 1 16 35 -8.055 -0.019 -6.709 1.756 -2.556 -2.169 -2.116 D 169 167 3 170 3 0 0 16 34 -6.174 -1.687 -0.566 IL 170 170 3 170 3 1 1 20 38 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 41 ] 35 - U - - - ML 171 170 3 173 3 1 1 15 33 -8.055 -0.019 -6.709 -1.656 -1.622 -2.397 1.664 D 172 170 3 173 3 0 0 15 33 -6.174 -1.687 -0.566 IL 173 173 3 173 3 1 1 19 37 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 42 ] 36 - C - - - ML 174 173 3 176 3 1 1 13 31 -8.055 -0.019 -6.709 -1.964 1.679 -2.793 -1.332 D 175 173 3 176 3 0 0 13 32 -6.174 -1.687 -0.566 IL 176 176 3 176 3 1 1 18 36 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 43 ] 37 - U - - - ML 177 176 3 179 2 1 1 1 1 * 0.000 -1.656 -1.622 -2.397 1.664 D 178 176 3 179 2 0 0 0 0 * 0.000 IL 179 179 3 179 2 1 1 13 28 -1.823 -0.479 0.000 0.000 0.000 0.000 [ END 44 ] - - - - - - E 180 179 3 -1 0 0 0 0 0 // HMMER3/f [3.4 | Aug 2023] NAME mir-7957 ACC RF03995 DESC mir-7957 microRNA precursor family LENG 59 MAXL 140 ALPH RNA RF no MM no CONS yes CS yes MAP yes DATE Tue Jul 9 07:59:10 2024 COM [1] /hps/software/users/agb/rfam/bin/cmbuild -F CM SEED COM [2] /hps/software/users/agb/rfam/bin/cmcalibrate --cpu 8 /nfs/production/agb/rfam/15/rescan/families/RF03995/CM NSEQ 4 EFFN 2.894531 CKSUM 2819481707 STATS LOCAL MSV -8.0972 0.71928 STATS LOCAL VITERBI -8.5321 0.71928 STATS LOCAL FORWARD -3.6708 0.71928 HMM A C G U m->m m->i m->d i->m i->i d->m d->d COMPO 1.47556 1.70663 1.53635 0.98161 1.38629 1.38629 1.38629 1.38629 0.19789 4.00748 1.82410 1.46634 0.26236 0.00000 * 1 0.16724 3.16908 2.90008 2.86575 1 A - - : 1.38629 1.38629 1.38629 1.38629 0.04336 3.85294 3.85294 1.46634 0.26236 2.38658 0.09645 2 0.65258 2.42162 1.34890 2.03260 2 A - - : 1.38629 1.38629 1.38629 1.38629 0.04336 3.85294 3.85294 1.46634 0.26236 0.20320 1.69343 3 3.25482 2.12650 3.04105 0.23020 3 U - - < 1.38629 1.38629 1.38629 1.38629 0.03704 4.00748 4.00748 1.46634 0.26236 1.09861 0.40547 4 3.26037 2.12696 3.04375 0.22970 4 U - - < 1.38629 1.38629 1.38629 1.38629 0.03704 4.00748 4.00748 1.46634 0.26236 1.09861 0.40547 5 2.86658 1.60821 2.66162 0.39597 5 U - - < 1.38629 1.38629 1.38629 1.38629 0.03704 4.00748 4.00748 1.46634 0.26236 1.09861 0.40547 6 2.74628 3.48864 0.13609 3.42575 6 G - - < 1.38629 1.38629 1.38629 1.38629 0.03704 4.00748 4.00748 1.46634 0.26236 1.09861 0.40547 7 3.26213 2.12710 3.04460 0.22954 7 U - - < 1.38629 1.38629 1.38629 1.38629 0.03704 4.00748 4.00748 1.46634 0.26236 1.09861 0.40547 8 3.45148 0.18555 3.25828 2.31060 8 C - - < 1.38629 1.38629 1.38629 1.38629 0.03704 4.00748 4.00748 1.46634 0.26236 1.09861 0.40547 9 3.45063 0.18562 3.25785 2.31045 9 C - - < 1.38629 1.38629 1.38629 1.38629 0.03704 4.00748 4.00748 1.46634 0.26236 1.09861 0.40547 10 3.26016 2.12694 3.04365 0.22972 10 U - - < 1.38629 1.38629 1.38629 1.38629 0.03704 4.00748 4.00748 1.46634 0.26236 1.09861 0.40547 11 2.88778 1.61270 2.68473 0.39051 11 U - - < 1.38629 1.38629 1.38629 1.38629 0.03704 4.00748 4.00748 1.46634 0.26236 1.09861 0.40547 12 2.22323 2.98898 0.24406 2.84802 12 G - - < 1.38629 1.38629 1.38629 1.38629 0.03704 4.00748 4.00748 1.46634 0.26236 1.09861 0.40547 13 2.74421 3.48593 0.13647 3.42205 13 G - - < 1.38629 1.38629 1.38629 1.38629 0.03704 4.00748 4.00748 1.46634 0.26236 1.09861 0.40547 14 3.15601 1.70292 2.97997 0.32233 14 U - - < 1.38629 1.38629 1.38629 1.38629 0.03704 4.00748 4.00748 1.46634 0.26236 1.09861 0.40547 15 2.07009 0.99752 2.63117 0.83693 15 u - - - 1.38629 1.38629 1.38629 1.38629 0.03704 4.00748 4.00748 1.46634 0.26236 1.09861 0.40547 16 0.55932 2.28522 2.34110 1.46782 16 A - - - 1.38629 1.38629 1.38629 1.38629 0.03704 4.00748 4.00748 1.46634 0.26236 1.09861 0.40547 17 1.31890 1.47320 2.22444 0.92823 17 u - - - 1.38629 1.38629 1.38629 1.38629 0.03704 4.00748 4.00748 1.46634 0.26236 1.09861 0.40547 18 0.11844 3.48935 3.18960 3.21929 18 A - - - 1.38629 1.38629 1.38629 1.38629 0.03704 4.00748 4.00748 1.46634 0.26236 1.09861 0.40547 19 3.17757 2.11992 3.00269 0.23747 19 U - - < 1.38629 1.38629 1.38629 1.38629 0.03704 4.00748 4.00748 1.46634 0.26236 1.09861 0.40547 20 3.21465 2.12313 3.02129 0.23391 20 U - - < 1.38629 1.38629 1.38629 1.38629 0.03704 4.00748 4.00748 1.46634 0.26236 1.09861 0.40547 21 1.49013 2.58142 0.49276 2.42983 21 G - - < 1.38629 1.38629 1.38629 1.38629 0.03704 4.00748 4.00748 1.46634 0.26236 1.09861 0.40547 22 3.42928 0.18744 3.24686 2.30648 22 C - - < 1.38629 1.38629 1.38629 1.38629 0.03704 4.00748 4.00748 1.46634 0.26236 1.09861 0.40547 23 2.84711 2.77135 3.37299 0.16827 23 U - - _ 1.38629 1.38629 1.38629 1.38629 0.03704 4.00748 4.00748 1.46634 0.26236 1.09861 0.40547 24 2.95279 3.86276 0.11137 3.43604 24 G - - _ 1.38629 1.38629 1.38629 1.38629 0.03704 4.00748 4.00748 1.46634 0.26236 1.09861 0.40547 25 2.84711 2.77135 3.37299 0.16827 25 U - - _ 1.38629 1.38629 1.38629 1.38629 0.03704 4.00748 4.00748 1.46634 0.26236 1.09861 0.40547 26 2.84711 2.77135 3.37299 0.16827 26 U - - _ 1.38629 1.38629 1.38629 1.38629 0.03704 4.00748 4.00748 1.46634 0.26236 1.09861 0.40547 27 1.86923 2.15058 1.63843 0.62538 27 U - - _ 1.38629 1.38629 1.38629 1.38629 0.03704 4.00748 4.00748 1.46634 0.26236 1.09861 0.40547 28 1.86923 2.15057 1.63843 0.62538 28 U - - _ 1.38629 1.38629 1.38629 1.38629 0.03704 4.00748 4.00748 1.46634 0.26236 1.09861 0.40547 29 2.84711 2.77135 3.37299 0.16827 29 U - - _ 1.38629 1.38629 1.38629 1.38629 0.03704 4.00748 4.00748 1.46634 0.26236 1.09861 0.40547 30 2.84711 2.77135 3.37299 0.16827 30 U - - _ 1.38629 1.38629 1.38629 1.38629 0.03704 4.00748 4.00748 1.46634 0.26236 1.09861 0.40547 31 1.93191 2.45718 0.60016 1.51081 31 G - - _ 1.38629 1.38629 1.38629 1.38629 0.03704 4.00748 4.00748 1.46634 0.26236 1.09861 0.40547 32 2.84711 2.77135 3.37298 0.16827 32 U - - _ 1.38629 1.38629 1.38629 1.38629 0.03704 4.00748 4.00748 1.46634 0.26236 1.09861 0.40547 33 2.84711 2.77135 3.37299 0.16827 33 U - - _ 1.38629 1.38629 1.38629 1.38629 0.03704 4.00748 4.00748 1.46634 0.26236 1.09861 0.40547 34 0.11844 3.48935 3.18960 3.21929 34 A - - _ 1.38629 1.38629 1.38629 1.38629 0.03704 4.00748 4.00748 1.46634 0.26236 1.09861 0.40547 35 2.84711 2.77135 3.37299 0.16827 35 U - - _ 1.38629 1.38629 1.38629 1.38629 0.03704 4.00748 4.00748 1.46634 0.26236 1.09861 0.40547 36 3.14874 0.14950 3.72211 2.63424 36 C - - _ 1.38629 1.38629 1.38629 1.38629 0.03704 4.00748 4.00748 1.46634 0.26236 1.09861 0.40547 37 2.84711 2.77135 3.37299 0.16827 37 U - - _ 1.38629 1.38629 1.38629 1.38629 0.03704 4.00748 4.00748 1.46634 0.26236 1.09861 0.40547 38 2.58421 3.41719 0.16108 3.20601 38 G - - > 1.38629 1.38629 1.38629 1.38629 0.03704 4.00748 4.00748 1.46634 0.26236 1.09861 0.40547 39 2.67282 0.71368 2.39343 1.05043 39 c - - > 1.38629 1.38629 1.38629 1.38629 0.03704 4.00748 4.00748 1.46634 0.26236 1.09861 0.40547 40 0.26147 3.22529 1.96249 2.99921 40 A - - > 1.38629 1.38629 1.38629 1.38629 0.03704 4.00748 4.00748 1.46634 0.26236 1.09861 0.40547 41 0.26161 3.22438 1.96236 2.99817 41 A - - > 1.38629 1.38629 1.38629 1.38629 0.39367 4.00748 1.18012 1.46634 0.26236 1.09861 0.40547 42 0.25680 2.78366 2.55332 2.44364 42 A - - - 1.38629 1.38629 1.38629 1.38629 0.05250 3.66630 3.66630 1.46634 0.26236 0.11184 2.24605 43 2.84711 2.77135 3.37299 0.16827 43 U - - - 1.38629 1.38629 1.38629 1.38629 0.03704 4.00748 4.00748 1.46634 0.26236 1.09861 0.40547 44 2.84711 2.77135 3.37298 0.16827 44 U - - - 1.38629 1.38629 1.38629 1.38629 0.03704 4.00748 4.00748 1.46634 0.26236 1.09861 0.40547 45 2.84711 2.77135 3.37299 0.16827 45 U - - - 1.38629 1.38629 1.38629 1.38629 0.03704 4.00748 4.00748 1.46634 0.26236 1.09861 0.40547 46 2.26945 3.16035 0.22447 2.89532 46 G - - > 1.38629 1.38629 1.38629 1.38629 0.03704 4.00748 4.00748 1.46634 0.26236 1.09861 0.40547 47 3.60711 0.16281 3.32542 2.43998 47 C - - > 1.38629 1.38629 1.38629 1.38629 0.03704 4.00748 4.00748 1.46634 0.26236 1.09861 0.40547 48 3.07324 0.41183 2.80442 1.46642 48 C - - > 1.38629 1.38629 1.38629 1.38629 0.03704 4.00748 4.00748 1.46634 0.26236 1.09861 0.40547 49 1.38681 2.84551 0.47555 2.65241 49 G - - > 1.38629 1.38629 1.38629 1.38629 0.03704 4.00748 4.00748 1.46634 0.26236 1.09861 0.40547 50 0.26046 3.23193 1.96346 3.00678 50 A - - > 1.38629 1.38629 1.38629 1.38629 0.03704 4.00748 4.00748 1.46634 0.26236 1.09861 0.40547 51 2.58913 3.42446 0.15997 3.21441 51 G - - > 1.38629 1.38629 1.38629 1.38629 0.03704 4.00748 4.00748 1.46634 0.26236 1.09861 0.40547 52 2.58966 3.42525 0.15985 3.21532 52 G - - > 1.38629 1.38629 1.38629 1.38629 0.03704 4.00748 4.00748 1.46634 0.26236 1.09861 0.40547 53 0.26017 3.23384 1.96374 3.00897 53 A - - > 1.38629 1.38629 1.38629 1.38629 0.03704 4.00748 4.00748 1.46634 0.26236 1.09861 0.40547 54 3.61832 0.16202 3.33065 2.44209 54 C - - > 1.38629 1.38629 1.38629 1.38629 0.03704 4.00748 4.00748 1.46634 0.26236 1.09861 0.40547 55 1.34442 2.82477 0.49729 2.63374 55 G - - > 1.38629 1.38629 1.38629 1.38629 0.03704 4.00748 4.00748 1.46634 0.26236 1.09861 0.40547 56 0.25952 3.23821 1.96438 3.01395 56 A - - > 1.38629 1.38629 1.38629 1.38629 0.03704 4.00748 4.00748 1.46634 0.26236 1.09861 0.40547 57 0.25910 3.24097 1.96478 3.01712 57 A - - > 1.38629 1.38629 1.38629 1.38629 0.03704 4.00748 4.00748 1.46634 0.26236 1.09861 0.40547 58 0.11844 3.48935 3.18960 3.21929 58 A - - : 1.38629 1.38629 1.38629 1.38629 0.03704 4.00748 4.00748 1.46634 0.26236 1.09861 0.40547 59 2.84711 2.77135 3.37298 0.16827 59 U - - : 1.38629 1.38629 1.38629 1.38629 0.01869 3.98913 * 1.46634 0.26236 0.00000 * //