INFERNAL1/a [1.1.5 | Sep 2023] NAME mir-7950 ACC RF03989 DESC mir-7950 microRNA precursor family STATES 181 NODES 42 CLEN 59 W 75 ALPH RNA RF no CONS yes MAP yes DATE Mon Jul 8 01:40:19 2024 COM [1] /hps/software/users/agb/rfam/bin/cmbuild -F CM SEED COM [2] /hps/software/users/agb/rfam/bin/cmcalibrate --cpu 8 /nfs/production/agb/rfam/15/rescan/families/RF03989/CM PBEGIN 0.05 PEND 0.05 WBETA 1e-07 QDBBETA1 1e-07 QDBBETA2 1e-15 N2OMEGA 1.52588e-05 N3OMEGA 1.52588e-05 ELSELF -0.08926734 NSEQ 2 EFFN 1.816406 CKSUM 616120153 NULL 0.000 0.000 0.000 0.000 GA 82.00 TC 82.10 NC 43.80 EFP7GF -5.5768 0.72978 ECMLC 0.65354 -5.27081 3.69666 1600000 421108 0.002850 ECMGC 0.40025 -17.34977 -2.37462 1600000 160374 0.002494 ECMLI 0.63550 -3.69153 4.88793 1600000 279949 0.004286 ECMGI 0.43493 -12.01267 0.53967 1600000 93985 0.004256 CM [ ROOT 0 ] - - - - - - S 0 -1 0 1 4 1 1 75 95 -6.901 -7.108 -0.523 -1.795 IL 1 1 2 1 4 1 17 79 99 -1.686 -2.369 -1.117 -4.855 0.000 0.000 0.000 0.000 IR 2 2 3 2 3 1 17 78 98 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 1 ] 1 - G - - - ML 3 2 3 5 3 1 16 75 95 -7.936 -0.025 -6.254 -0.641 -1.684 1.363 -1.072 D 4 2 3 5 3 0 12 74 94 -6.851 -0.268 -2.634 IL 5 5 3 5 3 1 15 76 95 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 2 ] - 59 - U - - MR 6 5 3 8 5 1 15 74 94 -7.055 -0.400 -6.871 -2.172 -7.975 -1.406 -1.416 -2.135 1.595 D 7 5 3 8 5 0 9 73 93 -5.352 -0.707 -2.978 -4.409 -2.404 IR 8 8 3 8 5 1 14 74 94 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 3 ] 2 58 a u - - MP 9 8 3 13 6 2 17 73 93 -8.938 -8.878 -0.024 -7.654 -7.934 -8.329 -3.193 -2.395 -3.241 2.692 -3.276 -4.311 0.997 -3.306 -3.167 1.754 -3.681 0.011 0.568 -3.601 -0.953 -2.119 ML 10 8 3 13 6 1 11 72 91 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 11 8 3 13 6 1 12 72 92 -8.083 -6.812 -0.548 -6.790 -1.924 -5.004 -0.708 -0.856 -1.385 1.294 D 12 8 3 13 6 0 5 69 89 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 13 13 5 13 6 1 13 73 93 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 14 14 6 14 5 1 13 72 92 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 4 ] 3 57 G C - - MP 15 14 6 19 6 2 16 71 91 -9.090 -9.029 -0.021 -7.805 -8.085 -8.480 -4.660 -3.055 -4.752 0.254 -5.118 -4.662 -0.503 -4.989 -4.274 3.618 -4.617 -0.751 -0.890 -4.414 -2.535 -3.630 ML 16 14 6 19 6 1 10 70 89 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 17 14 6 19 6 1 10 69 89 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 18 14 6 19 6 0 5 67 87 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 19 19 5 19 6 1 12 71 91 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 20 20 6 20 5 1 12 70 90 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 5 ] 4 56 U A - - MP 21 20 6 25 6 2 15 69 89 -9.090 -9.029 -0.021 -7.805 -8.085 -8.480 -4.102 -3.924 -3.950 -0.225 -2.911 -4.522 1.416 -3.600 -3.955 0.042 -4.333 -1.826 3.284 -4.257 -0.589 -2.788 ML 22 20 6 25 6 1 10 68 87 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 23 20 6 25 6 1 9 67 87 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 24 20 6 25 6 0 5 65 85 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 25 25 5 25 6 1 11 69 89 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 26 26 6 26 5 1 11 68 88 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 6 ] 5 55 U A - - MP 27 26 6 31 6 2 13 67 87 -9.090 -9.029 -0.021 -7.805 -8.085 -8.480 -4.102 -3.924 -3.950 -0.225 -2.911 -4.522 1.416 -3.600 -3.955 0.042 -4.333 -1.826 3.284 -4.257 -0.589 -2.788 ML 28 26 6 31 6 1 9 66 86 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 29 26 6 31 6 1 8 66 85 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 30 26 6 31 6 0 4 63 83 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 31 31 5 31 6 1 10 67 87 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 32 32 6 32 5 1 10 66 86 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 7 ] 6 54 C G - - MP 33 32 6 37 6 2 11 65 85 -9.090 -9.029 -0.021 -7.805 -8.085 -8.480 -4.465 -4.363 -4.169 -0.603 -2.906 -4.592 3.524 -3.707 -4.215 -0.351 -4.485 -2.309 0.617 -4.540 -0.610 -3.058 ML 34 32 6 37 6 1 8 64 84 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 35 32 6 37 6 1 7 64 84 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 36 32 6 37 6 0 4 62 82 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 37 37 5 37 6 1 9 65 85 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 38 38 6 38 5 1 9 64 84 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 8 ] 7 53 A U - - MP 39 38 6 43 4 2 9 63 83 -6.901 -7.108 -0.055 -5.522 -3.722 -2.771 -3.746 3.285 -4.049 -5.105 0.246 -3.792 -3.640 1.154 -4.184 -0.259 -0.172 -4.305 -1.695 -2.584 ML 40 38 6 43 4 1 7 63 83 -3.758 -3.940 -0.507 -2.670 0.368 -0.385 -0.191 0.094 MR 41 38 6 43 4 1 5 63 83 -4.809 -3.838 -1.706 -0.766 0.368 -0.385 -0.191 0.094 D 42 38 6 43 4 0 4 62 82 -4.568 -4.250 -2.265 -0.520 IL 43 43 5 43 4 1 8 65 85 -1.686 -2.369 -1.117 -4.855 0.000 0.000 0.000 0.000 IR 44 44 6 44 3 1 8 64 84 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 9 ] 8 - u - - - ML 45 44 6 47 3 1 8 61 80 -8.314 -0.019 -6.632 -0.671 0.445 -1.445 0.716 D 46 44 6 47 3 0 3 59 79 -5.620 -0.734 -1.403 IL 47 47 3 47 3 1 7 61 81 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 10 ] - 52 - U - - MR 48 47 3 50 5 1 7 60 79 -7.055 -0.040 -6.871 -7.083 -7.975 -1.406 -1.416 -2.135 1.595 D 49 47 3 50 5 0 2 58 78 -5.352 -0.707 -2.978 -4.409 -2.404 IR 50 50 3 50 5 1 5 60 80 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 11 ] 9 51 C G - - MP 51 50 3 55 6 2 7 59 78 -9.090 -9.029 -0.021 -7.805 -8.085 -8.480 -4.465 -4.363 -4.169 -0.603 -2.906 -4.592 3.524 -3.707 -4.215 -0.351 -4.485 -2.309 0.617 -4.540 -0.610 -3.058 ML 52 50 3 55 6 1 3 58 78 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 53 50 3 55 6 1 2 58 77 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 54 50 3 55 6 0 0 56 76 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 55 55 5 55 6 1 4 58 78 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 56 56 6 56 5 1 4 58 78 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 12 ] 10 50 U A - - MP 57 56 6 61 4 2 5 57 76 -6.901 -7.108 -0.055 -5.522 -4.102 -3.924 -3.950 -0.225 -2.911 -4.522 1.416 -3.600 -3.955 0.042 -4.333 -1.826 3.284 -4.257 -0.589 -2.788 ML 58 56 6 61 4 1 2 57 77 -3.758 -3.940 -0.507 -2.670 0.368 -0.385 -0.191 0.094 MR 59 56 6 61 4 1 1 57 76 -4.809 -3.838 -1.706 -0.766 0.368 -0.385 -0.191 0.094 D 60 56 6 61 4 0 0 55 75 -4.568 -4.250 -2.265 -0.520 IL 61 61 5 61 4 1 4 58 78 -1.686 -2.369 -1.117 -4.855 0.000 0.000 0.000 0.000 IR 62 62 6 62 3 1 3 57 77 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 13 ] 11 - u - - - ML 63 62 6 65 3 1 4 54 74 -8.314 -0.019 -6.632 -0.346 -0.917 0.321 0.520 D 64 62 6 65 3 0 0 53 72 -5.620 -0.734 -1.403 IL 65 65 3 65 3 1 2 55 75 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 14 ] - 49 - G - - MR 66 65 3 68 5 1 3 53 73 -7.055 -0.040 -6.871 -7.083 -7.975 -1.487 -2.693 1.701 -2.079 D 67 65 3 68 5 0 0 52 71 -5.352 -0.707 -2.978 -4.409 -2.404 IR 68 68 3 68 5 1 1 54 73 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 15 ] 12 48 U A - - MP 69 68 3 73 6 2 4 52 72 -9.090 -9.029 -0.021 -7.805 -8.085 -8.480 -4.102 -3.924 -3.950 -0.225 -2.911 -4.522 1.416 -3.600 -3.955 0.042 -4.333 -1.826 3.284 -4.257 -0.589 -2.788 ML 70 68 3 73 6 1 1 52 71 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 71 68 3 73 6 1 1 51 71 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 72 68 3 73 6 0 0 50 69 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 73 73 5 73 6 1 1 52 72 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 74 74 6 74 5 1 1 52 71 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 16 ] 13 47 U A - - MP 75 74 6 79 4 2 2 50 70 -6.901 -7.108 -0.055 -5.522 -4.102 -3.924 -3.950 -0.225 -2.911 -4.522 1.416 -3.600 -3.955 0.042 -4.333 -1.826 3.284 -4.257 -0.589 -2.788 ML 76 74 6 79 4 1 1 51 70 -3.758 -3.940 -0.507 -2.670 0.368 -0.385 -0.191 0.094 MR 77 74 6 79 4 1 1 50 70 -4.809 -3.838 -1.706 -0.766 0.368 -0.385 -0.191 0.094 D 78 74 6 79 4 0 0 49 69 -4.568 -4.250 -2.265 -0.520 IL 79 79 5 79 4 1 1 52 72 -1.686 -2.369 -1.117 -4.855 0.000 0.000 0.000 0.000 IR 80 80 6 80 3 1 1 51 71 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 17 ] 14 - g - - - ML 81 80 6 83 3 1 1 48 67 -8.314 -0.019 -6.632 -0.314 0.190 0.314 -0.300 D 82 80 6 83 3 0 0 47 66 -5.620 -0.734 -1.403 IL 83 83 3 83 3 1 1 49 68 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 18 ] - 46 - A - - MR 84 83 3 86 5 1 1 47 66 -7.055 -0.040 -6.871 -7.083 -7.975 1.699 -2.284 -1.924 -1.818 D 85 83 3 86 5 0 0 45 65 -5.352 -0.707 -2.978 -4.409 -2.404 IR 86 86 3 86 5 1 1 47 66 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 19 ] 15 45 C G - - MP 87 86 3 91 6 2 2 46 65 -9.090 -9.029 -0.021 -7.805 -8.085 -8.480 -4.465 -4.363 -4.169 -0.603 -2.906 -4.592 3.524 -3.707 -4.215 -0.351 -4.485 -2.309 0.617 -4.540 -0.610 -3.058 ML 88 86 3 91 6 1 1 44 63 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 89 86 3 91 6 1 1 44 63 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 90 86 3 91 6 0 0 42 61 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 91 91 5 91 6 1 1 45 65 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 92 92 6 92 5 1 1 45 64 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 20 ] 16 44 G C - - MP 93 92 6 97 6 2 2 44 63 -9.090 -9.029 -0.021 -7.805 -8.085 -8.480 -4.660 -3.055 -4.752 0.254 -5.118 -4.662 -0.503 -4.989 -4.274 3.618 -4.617 -0.751 -0.890 -4.414 -2.535 -3.630 ML 94 92 6 97 6 1 1 42 62 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 95 92 6 97 6 1 1 42 61 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 96 92 6 97 6 0 0 40 59 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 97 97 5 97 6 1 1 43 63 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 98 98 6 98 5 1 1 43 62 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 21 ] 17 43 C G - - MP 99 98 6 103 6 2 2 42 61 -9.090 -9.029 -0.021 -7.805 -8.085 -8.480 -4.465 -4.363 -4.169 -0.603 -2.906 -4.592 3.524 -3.707 -4.215 -0.351 -4.485 -2.309 0.617 -4.540 -0.610 -3.058 ML 100 98 6 103 6 1 1 40 60 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 101 98 6 103 6 1 1 40 60 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 102 98 6 103 6 0 0 38 57 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 103 103 5 103 6 1 1 41 61 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 104 104 6 104 5 1 1 41 60 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 22 ] 18 42 C G - - MP 105 104 6 109 6 2 2 40 59 -9.090 -9.029 -0.021 -7.805 -8.085 -8.480 -4.465 -4.363 -4.169 -0.603 -2.906 -4.592 3.524 -3.707 -4.215 -0.351 -4.485 -2.309 0.617 -4.540 -0.610 -3.058 ML 106 104 6 109 6 1 1 39 58 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 107 104 6 109 6 1 1 39 58 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 108 104 6 109 6 0 0 37 57 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 109 109 5 109 6 1 1 40 59 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 110 110 6 110 5 1 1 39 58 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 23 ] 19 41 G C - - MP 111 110 6 115 4 2 2 38 57 -6.901 -7.108 -0.055 -5.522 -4.660 -3.055 -4.752 0.254 -5.118 -4.662 -0.503 -4.989 -4.274 3.618 -4.617 -0.751 -0.890 -4.414 -2.535 -3.630 ML 112 110 6 115 4 1 1 38 58 -3.758 -3.940 -0.507 -2.670 0.368 -0.385 -0.191 0.094 MR 113 110 6 115 4 1 1 38 57 -4.809 -3.838 -1.706 -0.766 0.368 -0.385 -0.191 0.094 D 114 110 6 115 4 0 0 37 56 -4.568 -4.250 -2.265 -0.520 IL 115 115 5 115 4 1 1 40 59 -1.686 -2.369 -1.117 -4.855 0.000 0.000 0.000 0.000 IR 116 116 6 116 3 1 1 39 58 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 24 ] 20 - U - - - ML 117 116 6 119 3 1 1 35 54 -7.921 -0.021 -6.575 -1.406 -1.416 -2.135 1.595 D 118 116 6 119 3 0 0 34 53 -6.174 -1.687 -0.566 IL 119 119 3 119 3 1 1 38 57 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 25 ] 21 - U - - - ML 120 119 3 122 3 1 1 34 53 -8.314 -0.019 -6.632 -1.406 -1.416 -2.135 1.595 D 121 119 3 122 3 0 0 33 52 -5.620 -0.734 -1.403 IL 122 122 3 122 3 1 1 35 54 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 26 ] - 40 - C - - MR 123 122 3 125 3 1 1 33 52 -8.314 -0.019 -6.632 -1.636 1.595 -2.456 -1.071 D 124 122 3 125 3 0 0 31 50 -6.390 -1.568 -0.620 IR 125 125 3 125 3 1 1 34 53 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 27 ] - 39 - G - - MR 126 125 3 128 3 1 1 32 51 -8.314 -0.019 -6.632 -1.487 -2.693 1.701 -2.079 D 127 125 3 128 3 0 0 30 49 -6.390 -1.568 -0.620 IR 128 128 3 128 3 1 1 33 52 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 28 ] - 38 - U - - MR 129 128 3 131 3 1 1 31 50 -8.314 -0.019 -6.632 -1.406 -1.416 -2.135 1.595 D 130 128 3 131 3 0 0 29 48 -6.390 -1.568 -0.620 IR 131 131 3 131 3 1 1 32 51 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 29 ] - 37 - u - - MR 132 131 3 134 5 1 1 30 49 -7.055 -0.040 -6.871 -7.083 -7.975 -0.346 -0.917 0.321 0.520 D 133 131 3 134 5 0 0 29 48 -5.352 -0.707 -2.978 -4.409 -2.404 IR 134 134 3 134 5 1 1 30 49 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 30 ] 22 36 A U - - MP 135 134 3 139 6 2 2 29 48 -9.090 -9.029 -0.021 -7.805 -8.085 -8.480 -3.722 -2.771 -3.746 3.285 -4.049 -5.105 0.246 -3.792 -3.640 1.154 -4.184 -0.259 -0.172 -4.305 -1.695 -2.584 ML 136 134 3 139 6 1 1 28 47 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 137 134 3 139 6 1 1 27 46 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 138 134 3 139 6 0 0 25 44 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 139 139 5 139 6 1 1 29 48 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 140 140 6 140 5 1 1 28 47 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 31 ] 23 35 A U - - MP 141 140 6 145 6 2 2 27 46 -9.090 -9.029 -0.021 -7.805 -8.085 -8.480 -3.722 -2.771 -3.746 3.285 -4.049 -5.105 0.246 -3.792 -3.640 1.154 -4.184 -0.259 -0.172 -4.305 -1.695 -2.584 ML 142 140 6 145 6 1 1 26 45 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 143 140 6 145 6 1 1 26 45 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 144 140 6 145 6 0 0 24 43 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 145 145 5 145 6 1 1 27 46 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 146 146 6 146 5 1 1 26 45 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 32 ] 24 34 U A - - MP 147 146 6 151 6 2 2 25 44 -9.090 -9.029 -0.021 -7.805 -8.085 -8.480 -4.102 -3.924 -3.950 -0.225 -2.911 -4.522 1.416 -3.600 -3.955 0.042 -4.333 -1.826 3.284 -4.257 -0.589 -2.788 ML 148 146 6 151 6 1 1 25 43 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 149 146 6 151 6 1 1 24 43 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 150 146 6 151 6 0 0 23 42 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 151 151 5 151 6 1 1 25 44 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 152 152 6 152 5 1 1 25 43 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 33 ] 25 33 G C - - MP 153 152 6 157 4 2 2 23 42 -6.901 -7.108 -0.055 -5.522 -4.660 -3.055 -4.752 0.254 -5.118 -4.662 -0.503 -4.989 -4.274 3.618 -4.617 -0.751 -0.890 -4.414 -2.535 -3.630 ML 154 152 6 157 4 1 1 24 43 -3.758 -3.940 -0.507 -2.670 0.368 -0.385 -0.191 0.094 MR 155 152 6 157 4 1 1 23 42 -4.809 -3.838 -1.706 -0.766 0.368 -0.385 -0.191 0.094 D 156 152 6 157 4 0 0 22 41 -4.568 -4.250 -2.265 -0.520 IL 157 157 5 157 4 1 1 25 44 -1.686 -2.369 -1.117 -4.855 0.000 0.000 0.000 0.000 IR 158 158 6 158 3 1 1 24 43 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 34 ] 26 - U - - - ML 159 158 6 161 3 1 1 20 39 -7.921 -0.021 -6.575 -1.406 -1.416 -2.135 1.595 D 160 158 6 161 3 0 0 19 38 -6.174 -1.687 -0.566 IL 161 161 3 161 3 1 1 23 42 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 35 ] 27 - A - - - ML 162 161 3 164 3 1 1 19 37 -7.921 -0.021 -6.575 1.699 -2.284 -1.924 -1.818 D 163 161 3 164 3 0 0 18 37 -6.174 -1.687 -0.566 IL 164 164 3 164 3 1 1 22 41 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 36 ] 28 - u - - - ML 165 164 3 167 3 1 1 18 36 -7.921 -0.021 -6.575 0.546 -0.826 -1.030 0.571 D 166 164 3 167 3 0 0 17 36 -6.174 -1.687 -0.566 IL 167 167 3 167 3 1 1 21 40 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 37 ] 29 - A - - - ML 168 167 3 170 3 1 1 16 35 -7.921 -0.021 -6.575 1.699 -2.284 -1.924 -1.818 D 169 167 3 170 3 0 0 16 34 -6.174 -1.687 -0.566 IL 170 170 3 170 3 1 1 20 38 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 38 ] 30 - G - - - ML 171 170 3 173 3 1 1 15 33 -7.921 -0.021 -6.575 -1.487 -2.693 1.701 -2.079 D 172 170 3 173 3 0 0 15 33 -6.174 -1.687 -0.566 IL 173 173 3 173 3 1 1 19 37 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 39 ] 31 - U - - - ML 174 173 3 176 3 1 1 13 32 -7.921 -0.021 -6.575 -1.406 -1.416 -2.135 1.595 D 175 173 3 176 3 0 0 13 32 -6.174 -1.687 -0.566 IL 176 176 3 176 3 1 1 18 36 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 40 ] 32 - U - - - ML 177 176 3 179 2 1 1 1 1 * 0.000 -1.406 -1.416 -2.135 1.595 D 178 176 3 179 2 0 0 0 0 * 0.000 IL 179 179 3 179 2 1 1 13 28 -1.823 -0.479 0.000 0.000 0.000 0.000 [ END 41 ] - - - - - - E 180 179 3 -1 0 0 0 0 0 // HMMER3/f [3.4 | Aug 2023] NAME mir-7950 ACC RF03989 DESC mir-7950 microRNA precursor family LENG 59 MAXL 145 ALPH RNA RF no MM no CONS yes CS yes MAP yes DATE Mon Jul 8 01:40:19 2024 COM [1] /hps/software/users/agb/rfam/bin/cmbuild -F CM SEED COM [2] /hps/software/users/agb/rfam/bin/cmcalibrate --cpu 8 /nfs/production/agb/rfam/15/rescan/families/RF03989/CM NSEQ 2 EFFN 1.777344 CKSUM 616120153 STATS LOCAL MSV -7.7519 0.72978 STATS LOCAL VITERBI -9.0638 0.72978 STATS LOCAL FORWARD -3.1596 0.72978 HMM A C G U m->m m->i m->d i->m i->i d->m d->d COMPO 1.50536 1.51396 1.33159 1.22428 1.38629 1.38629 1.38629 1.38629 0.33093 3.73767 1.35504 1.46634 0.26236 0.00000 * 1 1.81693 2.53669 0.45017 2.11336 1 G - - : 1.38629 1.38629 1.38629 1.38629 0.06419 3.47093 3.47093 1.46634 0.26236 2.55205 0.08113 2 0.86154 1.94437 1.25113 1.90899 2 a - - < 1.38629 1.38629 1.38629 1.38629 0.06419 3.47093 3.47093 1.46634 0.26236 0.16942 1.85890 3 2.38868 2.92316 0.22638 2.86339 3 G - - < 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 4 2.65271 1.68364 2.37347 0.42973 4 U - - < 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 5 2.65519 1.68366 2.37440 0.42932 5 U - - < 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 6 2.89527 0.32521 2.63818 1.89150 6 C - - < 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 7 0.48396 2.43460 1.59323 2.37772 7 A - - < 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 8 1.84290 1.08171 2.37806 0.89185 8 u - - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 9 2.90023 0.32445 2.64030 1.89228 9 C - - < 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 10 2.66415 1.68374 2.37777 0.42786 10 U - - < 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 11 1.62093 2.01604 1.16711 1.02767 11 u - - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 12 2.66298 1.68373 2.37733 0.42805 12 U - - < 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 13 2.66553 1.68375 2.37829 0.42763 13 U - - < 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 14 1.59789 1.25836 1.17360 1.58813 14 g - - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 15 2.90357 0.32395 2.64172 1.89281 15 C - - < 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 16 2.40030 2.93498 0.22306 2.88039 16 G - - < 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 17 2.90790 0.32330 2.64355 1.89349 17 C - - < 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 18 2.90782 0.32331 2.64352 1.89348 18 C - - < 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 19 2.40050 2.93518 0.22301 2.88068 19 G - - < 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 20 2.34104 2.35184 2.84555 0.28705 20 U - - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 21 2.34104 2.35184 2.84555 0.28705 21 U - - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 22 0.48352 2.43570 1.59330 2.37947 22 A - - < 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 23 0.48310 2.43673 1.59337 2.38110 23 A - - < 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 24 2.66575 1.68375 2.37837 0.42760 24 U - - < 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 25 2.40049 2.93518 0.22301 2.88067 25 G - - < 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 26 2.34104 2.35184 2.84555 0.28705 26 U - - _ 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 27 0.21345 2.94778 2.70095 2.62270 27 A - - _ 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 28 1.00934 1.95362 2.09501 0.99233 28 u - - _ 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 29 0.21345 2.94778 2.70095 2.62270 29 A - - _ 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 30 2.39440 3.22613 0.21284 2.80057 30 G - - _ 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 31 2.34104 2.35184 2.84555 0.28705 31 U - - _ 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 32 2.34104 2.35184 2.84555 0.28705 32 U - - _ 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 33 3.09776 0.26117 2.76653 2.10518 33 C - - > 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 34 0.48619 2.55774 1.52046 2.41977 34 A - - > 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 35 2.61596 1.85508 2.25327 0.40736 35 U - - > 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 36 2.61770 1.85519 2.25382 0.40705 36 U - - > 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 37 1.62093 2.01604 1.16711 1.02767 37 u - - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 38 2.34104 2.35184 2.84555 0.28705 38 U - - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 39 2.39440 3.22613 0.21284 2.80057 39 G - - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 40 2.49445 0.28872 3.06201 2.10831 40 C - - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 41 3.09654 0.26132 2.76604 2.10495 41 C - - > 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 42 2.16864 2.81089 0.27979 2.66539 42 G - - > 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 43 2.16928 2.81165 0.27954 2.66638 43 G - - > 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 44 3.10309 0.26053 2.76868 2.10621 44 C - - > 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 45 2.17105 2.81377 0.27885 2.66914 45 G - - > 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 46 0.21345 2.94778 2.70095 2.62270 46 A - - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 47 0.48594 2.55851 1.52046 2.42082 47 A - - > 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 48 0.48568 2.55930 1.52047 2.42189 48 A - - > 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 49 2.39440 3.22613 0.21284 2.80057 49 G - - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 50 0.48603 2.55823 1.52046 2.42044 50 A - - > 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 51 2.17060 2.81323 0.27903 2.66843 51 G - - > 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 52 2.34104 2.35184 2.84555 0.28705 52 U - - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 53 2.58957 1.85333 2.24481 0.41206 53 U - - > 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 54 2.14865 2.78699 0.28769 2.63447 54 G - - > 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 55 0.49491 2.53122 1.52043 2.38389 55 A - - > 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 56 0.50089 2.51354 1.52040 2.36016 56 A - - > 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 57 2.81688 0.30163 2.64338 2.04429 57 C - - > 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 58 2.09723 1.54860 1.86875 0.67267 58 U - - > 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 59 2.34104 2.35184 2.84555 0.28705 59 U - - : 1.38629 1.38629 1.38629 1.38629 0.02469 3.71357 * 1.46634 0.26236 0.00000 * //