INFERNAL1/a [1.1.5 | Sep 2023] NAME mir-8830 ACC RF03949 DESC mir-8830 microRNA precursor family STATES 289 NODES 63 CLEN 95 W 113 ALPH RNA RF no CONS yes MAP yes DATE Tue Jul 16 18:49:43 2024 COM [1] /hps/software/users/agb/rfam/bin/cmbuild -F CM SEED COM [2] /hps/software/users/agb/rfam/bin/cmcalibrate --cpu 8 /nfs/production/agb/rfam/15/rescan/families/RF03949/CM PBEGIN 0.05 PEND 0.05 WBETA 1e-07 QDBBETA1 1e-07 QDBBETA2 1e-15 N2OMEGA 1.52588e-05 N3OMEGA 1.52588e-05 ELSELF -0.08926734 NSEQ 3 EFFN 0.717773 CKSUM 1020836267 NULL 0.000 0.000 0.000 0.000 GA 76.00 TC 76.80 NC 70.70 EFP7GF -5.6346 0.71883 ECMLC 0.61035 -5.41383 3.10217 1600000 217041 0.005529 ECMGC 0.35901 -16.64265 -2.64556 1600000 60874 0.006571 ECMLI 0.54655 -4.07752 4.90284 1600000 162481 0.007385 ECMGI 0.39206 -9.92204 1.95115 1600000 42044 0.009514 CM [ ROOT 0 ] - - - - - - S 0 -1 0 1 4 1 1 113 134 -6.339 -6.546 -0.239 -2.947 IL 1 1 2 1 4 4 43 117 138 -1.686 -2.369 -1.117 -4.855 0.000 0.000 0.000 0.000 IR 2 2 3 2 3 4 43 116 137 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 1 ] 1 - c - - - ML 3 2 3 5 3 4 42 113 134 -7.277 -0.033 -5.931 -0.318 0.808 -1.044 -0.056 D 4 2 3 5 3 0 37 111 132 -6.806 -2.319 -0.339 IL 5 5 3 5 3 3 42 115 136 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 2 ] 2 - A - - - ML 6 5 3 8 3 4 41 112 133 -7.724 -0.029 -6.042 1.186 -1.083 -0.828 -0.538 D 7 5 3 8 3 0 36 111 131 -6.036 -1.150 -0.905 IL 8 8 3 8 3 3 41 113 134 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 3 ] - 95 - a - - MR 9 8 3 11 3 4 41 111 132 -7.724 -0.029 -6.042 0.025 -0.049 0.000 0.022 D 10 8 3 11 3 0 35 109 130 -6.938 -2.116 -0.394 IR 11 11 3 11 3 3 40 112 133 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 4 ] - 94 - c - - MR 12 11 3 14 3 3 40 110 131 -7.724 -0.029 -6.042 -0.318 0.808 -1.044 -0.056 D 13 11 3 14 3 0 34 108 129 -6.938 -2.116 -0.394 IR 14 14 3 14 3 2 39 111 132 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 5 ] - 93 - U - - MR 15 14 3 17 5 3 39 109 130 -6.514 -0.059 -6.330 -6.542 -7.434 -0.343 -0.593 -0.980 1.030 D 16 14 3 17 5 0 34 108 128 -5.685 -1.039 -3.311 -4.742 -1.490 IR 17 17 3 17 5 2 38 109 130 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 6 ] 3 92 g c - - MP 18 17 3 22 6 4 39 108 129 -8.863 -8.803 -0.025 -7.579 -7.859 -8.254 -2.967 -2.111 -3.065 1.432 -3.198 -4.038 1.070 -3.178 -2.947 2.239 -3.447 1.573 0.697 -3.344 -0.874 -1.940 ML 19 17 3 22 6 1 36 107 128 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 20 17 3 22 6 1 34 107 128 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 21 17 3 22 6 0 31 105 126 -9.548 -8.246 -4.043 -4.725 -4.743 -0.218 IL 22 22 5 22 6 2 37 108 129 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 23 23 6 23 5 2 37 107 128 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 7 ] 4 91 G C - - MP 24 23 6 28 4 3 37 106 127 -6.191 -6.398 -0.091 -4.812 -3.488 -2.513 -3.538 0.979 -3.452 -4.119 0.921 -3.621 -3.382 3.069 -3.820 -0.200 0.468 -3.618 -1.073 -2.430 ML 25 23 6 28 4 1 35 106 127 -3.758 -3.940 -0.507 -2.670 0.368 -0.385 -0.191 0.094 MR 26 23 6 28 4 1 32 105 127 -4.809 -3.838 -1.706 -0.766 0.368 -0.385 -0.191 0.094 D 27 23 6 28 4 0 31 104 125 -5.040 -4.721 -2.737 -0.355 IL 28 28 5 28 4 2 36 107 128 -1.686 -2.369 -1.117 -4.855 0.000 0.000 0.000 0.000 IR 29 29 6 29 3 1 36 106 127 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 8 ] 5 - A - - - ML 30 29 6 32 5 2 35 104 124 -6.514 -0.059 -6.330 -6.542 -7.434 1.186 -1.083 -0.828 -0.538 D 31 29 6 32 5 0 30 103 123 -5.348 -0.570 -4.609 -2.984 -2.897 IL 32 32 3 32 5 1 34 104 125 -2.408 -0.496 -4.087 -5.920 -5.193 0.000 0.000 0.000 0.000 [ MATP 9 ] 6 90 C G - - MP 33 32 3 37 6 3 35 103 123 -8.904 -8.844 -0.024 -7.620 -7.900 -8.295 -3.572 -3.345 -3.410 0.306 -2.397 -3.942 3.056 -3.094 -3.442 0.783 -3.790 -1.273 1.192 -3.693 -0.095 -2.321 ML 34 32 3 37 6 1 31 101 122 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 35 32 3 37 6 1 30 101 122 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 36 32 3 37 6 0 26 99 119 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 37 37 5 37 6 1 32 102 123 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 38 38 6 38 5 1 33 102 123 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 10 ] 7 89 C G - - MP 39 38 6 43 6 3 33 101 121 -8.904 -8.844 -0.024 -7.620 -7.900 -8.295 -3.572 -3.345 -3.410 0.306 -2.397 -3.942 3.056 -3.094 -3.442 0.783 -3.790 -1.273 1.192 -3.693 -0.095 -2.321 ML 40 38 6 43 6 1 30 99 120 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 41 38 6 43 6 1 29 99 120 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 42 38 6 43 6 0 25 97 118 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 43 43 5 43 6 1 31 100 121 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 44 44 6 44 5 1 31 100 121 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 11 ] 8 88 g c - - MP 45 44 6 49 6 2 31 99 119 -8.904 -8.844 -0.024 -7.620 -7.900 -8.295 -2.722 -2.264 -2.833 0.997 -2.787 -1.048 1.154 -3.101 -2.860 2.745 -3.317 -0.322 0.816 -2.853 -0.660 -1.933 ML 46 44 6 49 6 1 29 98 119 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 47 44 6 49 6 1 28 98 118 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 48 44 6 49 6 0 25 96 117 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 49 49 5 49 6 1 30 98 119 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 50 50 6 50 5 1 30 98 119 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 12 ] 9 87 G C - - MP 51 50 6 55 4 2 29 97 117 -6.339 -6.546 -0.082 -4.961 -3.700 -2.610 -3.754 0.849 -3.764 -4.232 0.641 -3.877 -3.562 3.230 -3.983 -0.296 0.211 -3.765 -1.354 -2.646 ML 52 50 6 55 4 1 28 97 118 -3.758 -3.940 -0.507 -2.670 0.368 -0.385 -0.191 0.094 MR 53 50 6 55 4 1 26 96 117 -4.809 -3.838 -1.706 -0.766 0.368 -0.385 -0.191 0.094 D 54 50 6 55 4 0 25 95 116 -4.568 -4.250 -2.265 -0.520 IL 55 55 5 55 4 1 29 98 119 -1.686 -2.369 -1.117 -4.855 0.000 0.000 0.000 0.000 IR 56 56 6 56 3 1 28 97 118 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 13 ] 10 - C - - - ML 57 56 6 59 3 1 27 94 115 -7.843 -0.027 -6.161 -0.544 1.033 -1.293 -0.218 D 58 56 6 59 3 0 24 93 114 -5.620 -0.734 -1.403 IL 59 59 3 59 3 1 27 95 116 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 14 ] - 86 - c - - MR 60 59 3 62 5 1 27 93 114 -6.622 -0.054 -6.437 -6.649 -7.541 0.289 0.291 -0.826 -0.014 D 61 59 3 62 5 0 22 92 113 -5.352 -0.707 -2.978 -4.409 -2.404 IR 62 62 3 62 5 1 25 94 114 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 15 ] 11 85 u a - - MP 63 62 3 67 6 2 26 92 113 -8.904 -8.844 -0.024 -7.620 -7.900 -8.295 -3.070 -2.942 -3.028 0.639 -2.226 -3.664 2.040 -2.854 -3.064 1.044 -3.488 -0.977 2.201 -3.236 0.840 -1.981 ML 64 62 3 67 6 1 23 91 112 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 65 62 3 67 6 1 21 91 112 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 66 62 3 67 6 0 19 89 110 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 67 67 5 67 6 1 24 92 113 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 68 68 6 68 5 1 24 92 112 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 16 ] 12 84 c g - - MP 69 68 6 73 4 2 24 90 111 -6.339 -6.546 -0.082 -4.961 -3.172 -3.018 -3.071 0.553 -2.170 -3.653 2.087 -2.829 -3.106 0.955 -3.493 -1.032 1.406 -3.328 1.949 -2.024 ML 70 68 6 73 4 1 22 90 111 -3.758 -3.940 -0.507 -2.670 0.368 -0.385 -0.191 0.094 MR 71 68 6 73 4 1 20 90 111 -4.809 -3.838 -1.706 -0.766 0.368 -0.385 -0.191 0.094 D 72 68 6 73 4 0 18 89 110 -4.568 -4.250 -2.265 -0.520 IL 73 73 5 73 4 1 23 92 112 -1.686 -2.369 -1.117 -4.855 0.000 0.000 0.000 0.000 IR 74 74 6 74 3 1 23 91 111 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 17 ] 13 - C - - - ML 75 74 6 77 3 1 23 88 108 -7.843 -0.027 -6.161 -0.544 1.033 -1.293 -0.218 D 76 74 6 77 3 0 17 87 107 -5.620 -0.734 -1.403 IL 77 77 3 77 3 1 22 89 109 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 18 ] - 83 - A - - MR 78 77 3 80 3 1 22 87 107 -7.843 -0.027 -6.161 1.337 -1.311 -1.044 -0.772 D 79 77 3 80 3 0 15 85 106 -6.390 -1.568 -0.620 IR 80 80 3 80 3 1 21 88 108 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 19 ] - 82 - C - - MR 81 80 3 83 5 1 21 86 106 -6.622 -0.054 -6.437 -6.649 -7.541 -0.544 1.033 -1.293 -0.218 D 82 80 3 83 5 0 14 85 105 -5.352 -0.707 -2.978 -4.409 -2.404 IR 83 83 3 83 5 1 19 86 107 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 20 ] 14 81 C G - - MP 84 83 3 88 6 2 22 85 105 -8.904 -8.844 -0.024 -7.620 -7.900 -8.295 -3.572 -3.345 -3.410 0.306 -2.397 -3.942 3.056 -3.094 -3.442 0.783 -3.790 -1.273 1.192 -3.693 -0.095 -2.321 ML 85 83 3 88 6 1 16 84 104 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 86 83 3 88 6 1 16 83 104 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 87 83 3 88 6 0 11 81 101 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 88 88 5 88 6 1 18 85 105 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 89 89 6 89 5 1 18 84 105 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 21 ] 15 80 C G - - MP 90 89 6 94 6 2 20 83 103 -8.904 -8.844 -0.024 -7.620 -7.900 -8.295 -3.572 -3.345 -3.410 0.306 -2.397 -3.942 3.056 -3.094 -3.442 0.783 -3.790 -1.273 1.192 -3.693 -0.095 -2.321 ML 91 89 6 94 6 1 15 82 102 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 92 89 6 94 6 1 15 81 102 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 93 89 6 94 6 0 10 79 99 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 94 94 5 94 6 1 17 83 103 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 95 95 6 95 5 1 17 82 103 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 22 ] 16 79 u a - - MP 96 95 6 100 6 2 19 81 101 -8.904 -8.844 -0.024 -7.620 -7.900 -8.295 -3.313 -3.053 -3.232 0.572 -2.395 -3.863 1.905 -3.013 -3.251 1.054 -3.658 -0.958 2.592 -3.481 -0.092 -2.143 ML 97 95 6 100 6 1 14 80 100 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 98 95 6 100 6 1 14 79 100 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 99 95 6 100 6 0 10 77 97 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 100 100 5 100 6 1 16 81 101 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 101 101 6 101 5 1 16 80 101 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 23 ] 17 78 C G - - MP 102 101 6 106 6 2 17 79 99 -8.904 -8.844 -0.024 -7.620 -7.900 -8.295 -3.572 -3.345 -3.410 0.306 -2.397 -3.942 3.056 -3.094 -3.442 0.783 -3.790 -1.273 1.192 -3.693 -0.095 -2.321 ML 103 101 6 106 6 1 13 78 98 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 104 101 6 106 6 1 14 78 98 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 105 101 6 106 6 0 9 75 96 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 106 106 5 106 6 1 15 79 99 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 107 107 6 107 5 1 15 78 99 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 24 ] 18 77 G C - - MP 108 107 6 112 4 2 15 77 97 -6.316 -7.562 -0.120 -4.015 -3.700 -2.610 -3.754 0.849 -3.764 -4.232 0.641 -3.877 -3.562 3.230 -3.983 -0.296 0.211 -3.765 -1.354 -2.646 ML 109 107 6 112 4 1 11 76 97 -2.408 -4.532 -1.293 -1.473 0.368 -0.385 -0.191 0.094 MR 110 107 6 112 4 1 13 76 96 -4.102 -12.528 -0.390 -2.485 0.368 -0.385 -0.191 0.094 D 111 107 6 112 4 0 9 74 94 -12.737 -14.007 -2.036 -0.404 IL 112 112 5 112 4 1 13 76 97 -2.817 -4.319 -0.613 -2.698 0.000 0.000 0.000 0.000 IR 113 113 6 113 3 1 14 77 97 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 25 ] - 76 - C - - MR 114 113 6 116 5 1 15 75 95 -6.622 -0.054 -6.437 -6.649 -7.541 -0.544 1.033 -1.293 -0.218 D 115 113 6 116 5 0 8 74 94 -5.352 -0.707 -2.978 -4.409 -2.404 IR 116 116 3 116 5 1 12 75 96 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 26 ] 19 75 c g - - MP 117 116 3 121 6 2 15 74 94 -8.904 -8.844 -0.024 -7.620 -7.900 -8.295 -3.042 -2.927 -2.992 0.636 -2.175 -3.617 2.077 -2.811 -3.031 1.027 -3.448 -0.981 1.874 -3.208 1.385 -1.956 ML 118 116 3 121 6 1 10 73 93 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 119 116 3 121 6 1 8 73 93 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 120 116 3 121 6 0 5 70 91 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 121 121 5 121 6 1 11 74 94 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 122 122 6 122 5 1 11 73 94 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 27 ] 20 74 C G - - MP 123 122 6 127 6 2 13 72 92 -8.904 -8.844 -0.024 -7.620 -7.900 -8.295 -3.572 -3.345 -3.410 0.306 -2.397 -3.942 3.056 -3.094 -3.442 0.783 -3.790 -1.273 1.192 -3.693 -0.095 -2.321 ML 124 122 6 127 6 1 9 71 91 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 125 122 6 127 6 1 7 71 91 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 126 122 6 127 6 0 4 69 89 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 127 127 5 127 6 1 10 72 92 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 128 128 6 128 5 1 10 71 92 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 28 ] 21 73 g c - - MP 129 128 6 133 4 2 11 70 90 -6.339 -6.546 -0.082 -4.961 -3.038 -2.117 -3.145 1.409 -3.368 -4.173 0.905 -3.255 -3.000 2.127 -3.501 1.958 0.539 -3.464 -1.031 -1.998 ML 130 128 6 133 4 1 8 70 91 -3.758 -3.940 -0.507 -2.670 0.368 -0.385 -0.191 0.094 MR 131 128 6 133 4 1 5 70 90 -4.809 -3.838 -1.706 -0.766 0.368 -0.385 -0.191 0.094 D 132 128 6 133 4 0 4 69 89 -4.568 -4.250 -2.265 -0.520 IL 133 133 5 133 4 1 10 71 92 -1.686 -2.369 -1.117 -4.855 0.000 0.000 0.000 0.000 IR 134 134 6 134 3 1 9 71 91 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 29 ] 22 - C - - - ML 135 134 6 137 5 1 11 68 88 -6.622 -0.054 -6.437 -6.649 -7.541 -0.544 1.033 -1.293 -0.218 D 136 134 6 137 5 0 4 66 86 -4.959 -0.803 -4.221 -2.596 -2.508 IL 137 137 3 137 5 1 8 68 88 -2.408 -0.496 -4.087 -5.920 -5.193 0.000 0.000 0.000 0.000 [ MATP 30 ] 23 72 u a - - MP 138 137 3 142 6 2 11 67 87 -8.904 -8.844 -0.024 -7.620 -7.900 -8.295 -3.313 -3.053 -3.232 0.572 -2.395 -3.863 1.905 -3.013 -3.251 1.054 -3.658 -0.958 2.592 -3.481 -0.092 -2.143 ML 139 137 3 142 6 1 5 65 85 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 140 137 3 142 6 1 5 65 85 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 141 137 3 142 6 0 1 63 83 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 142 142 5 142 6 1 7 66 86 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 143 143 6 143 5 1 7 66 86 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 31 ] 24 71 G C - - MP 144 143 6 148 6 2 10 65 85 -8.904 -8.844 -0.024 -7.620 -7.900 -8.295 -3.700 -2.610 -3.754 0.849 -3.764 -4.232 0.641 -3.877 -3.562 3.230 -3.983 -0.296 0.211 -3.765 -1.354 -2.646 ML 145 143 6 148 6 1 5 63 83 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 146 143 6 148 6 1 4 63 83 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 147 143 6 148 6 0 1 61 81 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 148 148 5 148 6 1 6 64 84 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 149 149 6 149 5 1 7 64 84 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 32 ] 25 70 a u - - MP 150 149 6 154 6 2 9 63 83 -8.904 -8.844 -0.024 -7.620 -7.900 -8.295 -3.113 -2.340 -3.162 2.513 -3.140 -4.182 1.135 -3.221 -3.091 1.866 -3.598 0.044 0.697 -3.493 -0.820 -2.046 ML 151 149 6 154 6 1 4 61 81 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 152 149 6 154 6 1 4 61 81 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 153 149 6 154 6 0 1 59 79 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 154 154 5 154 6 1 6 62 82 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 155 155 6 155 5 1 6 62 82 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 33 ] 26 69 G C - - MP 156 155 6 160 6 2 7 61 81 -8.904 -8.844 -0.024 -7.620 -7.900 -8.295 -3.700 -2.610 -3.754 0.849 -3.764 -4.232 0.641 -3.877 -3.562 3.230 -3.983 -0.296 0.211 -3.765 -1.354 -2.646 ML 157 155 6 160 6 1 4 60 80 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 158 155 6 160 6 1 3 59 80 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 159 155 6 160 6 0 0 58 78 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 160 160 5 160 6 1 5 60 80 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 161 161 6 161 5 1 5 60 80 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 34 ] 27 68 g c - - MP 162 161 6 166 4 2 5 59 79 -6.339 -6.546 -0.082 -4.961 -2.662 -2.201 -2.780 1.122 -2.745 -3.498 1.222 -3.014 -2.787 2.603 -0.788 -0.178 0.888 -2.865 -0.607 -1.844 ML 163 161 6 166 4 1 3 59 79 -3.758 -3.940 -0.507 -2.670 0.368 -0.385 -0.191 0.094 MR 164 161 6 166 4 1 1 58 78 -4.809 -3.838 -1.706 -0.766 0.368 -0.385 -0.191 0.094 D 165 161 6 166 4 0 0 57 77 -4.568 -4.250 -2.265 -0.520 IL 166 166 5 166 4 1 4 60 80 -1.686 -2.369 -1.117 -4.855 0.000 0.000 0.000 0.000 IR 167 167 6 167 3 1 4 59 79 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 35 ] 28 - C - - - ML 168 167 6 170 3 1 4 56 76 -7.843 -0.027 -6.161 -0.544 1.033 -1.293 -0.218 D 169 167 6 170 3 0 0 55 75 -5.620 -0.734 -1.403 IL 170 170 3 170 3 1 3 57 77 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 36 ] - 67 - c - - MR 171 170 3 173 5 1 4 55 75 -6.622 -0.054 -6.437 -6.649 -7.541 -0.306 0.452 -1.037 0.418 D 172 170 3 173 5 0 0 54 74 -5.352 -0.707 -2.978 -4.409 -2.404 IR 173 173 3 173 5 1 2 56 75 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 37 ] 29 66 a u - - MP 174 173 3 178 6 2 5 54 74 -8.904 -8.844 -0.024 -7.620 -7.900 -8.295 -3.113 -2.340 -3.162 2.513 -3.140 -4.182 1.135 -3.221 -3.091 1.866 -3.598 0.044 0.697 -3.493 -0.820 -2.046 ML 175 173 3 178 6 1 1 53 73 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 176 173 3 178 6 1 1 53 73 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 177 173 3 178 6 0 0 50 70 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 178 178 5 178 6 1 1 54 74 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 179 179 6 179 5 1 2 54 73 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 38 ] 30 65 g c - - MP 180 179 6 184 6 2 4 52 72 -8.904 -8.844 -0.024 -7.620 -7.900 -8.295 -3.038 -2.117 -3.145 1.409 -3.368 -4.173 0.905 -3.255 -3.000 2.127 -3.501 1.958 0.539 -3.464 -1.031 -1.998 ML 181 179 6 184 6 1 1 51 71 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 182 179 6 184 6 1 1 51 71 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 183 179 6 184 6 0 0 49 69 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 184 184 5 184 6 1 1 52 72 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 185 185 6 185 5 1 1 52 71 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 39 ] 31 64 G C - - MP 186 185 6 190 4 2 2 50 70 -6.339 -6.546 -0.082 -4.961 -3.700 -2.610 -3.754 0.849 -3.764 -4.232 0.641 -3.877 -3.562 3.230 -3.983 -0.296 0.211 -3.765 -1.354 -2.646 ML 187 185 6 190 4 1 1 50 70 -3.758 -3.940 -0.507 -2.670 0.368 -0.385 -0.191 0.094 MR 188 185 6 190 4 1 1 50 70 -4.809 -3.838 -1.706 -0.766 0.368 -0.385 -0.191 0.094 D 189 185 6 190 4 0 0 49 69 -4.568 -4.250 -2.265 -0.520 IL 190 190 5 190 4 1 1 52 72 -1.686 -2.369 -1.117 -4.855 0.000 0.000 0.000 0.000 IR 191 191 6 191 3 1 1 51 71 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 40 ] 32 - A - - - ML 192 191 6 194 5 1 1 48 67 -6.622 -0.054 -6.437 -6.649 -7.541 1.337 -1.311 -1.044 -0.772 D 193 191 6 194 5 0 0 46 66 -4.959 -0.803 -4.221 -2.596 -2.508 IL 194 194 3 194 5 1 1 48 68 -2.408 -0.496 -4.087 -5.920 -5.193 0.000 0.000 0.000 0.000 [ MATP 41 ] 33 63 C G - - MP 195 194 3 199 6 2 2 47 66 -8.904 -8.844 -0.024 -7.620 -7.900 -8.295 -3.572 -3.345 -3.410 0.306 -2.397 -3.942 3.056 -3.094 -3.442 0.783 -3.790 -1.273 1.192 -3.693 -0.095 -2.321 ML 196 194 3 199 6 1 1 45 65 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 197 194 3 199 6 1 1 45 65 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 198 194 3 199 6 0 0 43 63 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 199 199 5 199 6 1 1 46 66 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 200 200 6 200 5 1 1 46 66 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 42 ] 34 62 C G - - MP 201 200 6 205 6 2 2 45 64 -8.904 -8.844 -0.024 -7.620 -7.900 -8.295 -3.572 -3.345 -3.410 0.306 -2.397 -3.942 3.056 -3.094 -3.442 0.783 -3.790 -1.273 1.192 -3.693 -0.095 -2.321 ML 202 200 6 205 6 1 1 44 64 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 203 200 6 205 6 1 1 44 63 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 204 200 6 205 6 0 0 42 62 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 205 205 5 205 6 1 1 44 64 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 206 206 6 206 5 1 1 44 64 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 43 ] 35 61 G C - - MP 207 206 6 211 4 2 2 43 62 -6.339 -6.546 -0.082 -4.961 -3.700 -2.610 -3.754 0.849 -3.764 -4.232 0.641 -3.877 -3.562 3.230 -3.983 -0.296 0.211 -3.765 -1.354 -2.646 ML 208 206 6 211 4 1 1 43 63 -3.758 -3.940 -0.507 -2.670 0.368 -0.385 -0.191 0.094 MR 209 206 6 211 4 1 1 42 62 -4.809 -3.838 -1.706 -0.766 0.368 -0.385 -0.191 0.094 D 210 206 6 211 4 0 0 41 61 -4.568 -4.250 -2.265 -0.520 IL 211 211 5 211 4 1 1 44 64 -1.686 -2.369 -1.117 -4.855 0.000 0.000 0.000 0.000 IR 212 212 6 212 3 1 1 43 63 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 44 ] 36 - A - - - ML 213 212 6 215 3 1 1 40 59 -7.843 -0.027 -6.161 1.337 -1.311 -1.044 -0.772 D 214 212 6 215 3 0 0 39 58 -5.620 -0.734 -1.403 IL 215 215 3 215 3 1 1 41 60 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 45 ] - 60 - C - - MR 216 215 3 218 3 1 1 39 58 -7.843 -0.027 -6.161 -0.544 1.033 -1.293 -0.218 D 217 215 3 218 3 0 0 38 57 -6.390 -1.568 -0.620 IR 218 218 3 218 3 1 1 40 59 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 46 ] - 59 - a - - MR 219 218 3 221 5 1 1 38 57 -6.622 -0.054 -6.437 -6.649 -7.541 0.703 -0.219 -0.762 -0.115 D 220 218 3 221 5 0 0 37 56 -5.352 -0.707 -2.978 -4.409 -2.404 IR 221 221 3 221 5 1 1 38 58 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 47 ] 37 58 c g - - MP 222 221 3 226 6 2 2 37 56 -8.904 -8.844 -0.024 -7.620 -7.900 -8.295 -2.995 -3.000 -2.988 0.489 -0.164 -3.647 2.793 -2.867 -3.029 0.728 -3.469 -1.173 1.334 -3.202 -0.021 -1.999 ML 223 221 3 226 6 1 1 36 55 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 224 221 3 226 6 1 1 36 55 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 225 221 3 226 6 0 0 34 53 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 226 226 5 226 6 1 1 37 56 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 227 227 6 227 5 1 1 36 56 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 48 ] 38 57 c g - - MP 228 227 6 232 6 2 2 35 54 -8.904 -8.844 -0.024 -7.620 -7.900 -8.295 -3.172 -3.018 -3.071 0.553 -2.170 -3.653 2.087 -2.829 -3.106 0.955 -3.493 -1.032 1.406 -3.328 1.949 -2.024 ML 229 227 6 232 6 1 1 34 54 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 230 227 6 232 6 1 1 34 53 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 231 227 6 232 6 0 0 32 52 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 232 232 5 232 6 1 1 35 54 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 233 233 6 233 5 1 1 35 54 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 49 ] 39 56 u a - - MP 234 233 6 238 4 2 2 33 52 -6.339 -6.546 -0.082 -4.961 -3.313 -3.053 -3.232 0.572 -2.395 -3.863 1.905 -3.013 -3.251 1.054 -3.658 -0.958 2.592 -3.481 -0.092 -2.143 ML 235 233 6 238 4 1 1 33 53 -3.758 -3.940 -0.507 -2.670 0.368 -0.385 -0.191 0.094 MR 236 233 6 238 4 1 1 33 52 -4.809 -3.838 -1.706 -0.766 0.368 -0.385 -0.191 0.094 D 237 233 6 238 4 0 0 32 51 -4.568 -4.250 -2.265 -0.520 IL 238 238 5 238 4 1 1 35 54 -1.686 -2.369 -1.117 -4.855 0.000 0.000 0.000 0.000 IR 239 239 6 239 3 1 1 34 53 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 50 ] 40 - C - - - ML 240 239 6 242 3 1 1 30 49 -7.843 -0.027 -6.161 -0.544 1.033 -1.293 -0.218 D 241 239 6 242 3 0 0 29 48 -5.620 -0.734 -1.403 IL 242 242 3 242 3 1 1 31 50 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 51 ] - 55 - C - - MR 243 242 3 245 5 1 1 29 48 -6.622 -0.054 -6.437 -6.649 -7.541 -0.544 1.033 -1.293 -0.218 D 244 242 3 245 5 0 0 28 47 -5.352 -0.707 -2.978 -4.409 -2.404 IR 245 245 3 245 5 1 1 30 49 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 52 ] 41 54 C G - - MP 246 245 3 250 6 2 2 28 47 -8.904 -8.844 -0.024 -7.620 -7.900 -8.295 -3.572 -3.345 -3.410 0.306 -2.397 -3.942 3.056 -3.094 -3.442 0.783 -3.790 -1.273 1.192 -3.693 -0.095 -2.321 ML 247 245 3 250 6 1 1 27 46 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 248 245 3 250 6 1 1 27 46 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 249 245 3 250 6 0 0 25 44 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 250 250 5 250 6 1 1 28 47 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 251 251 6 251 5 1 1 28 47 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 53 ] 42 53 C G - - MP 252 251 6 256 6 2 2 26 45 -8.904 -8.844 -0.024 -7.620 -7.900 -8.295 -3.572 -3.345 -3.410 0.306 -2.397 -3.942 3.056 -3.094 -3.442 0.783 -3.790 -1.273 1.192 -3.693 -0.095 -2.321 ML 253 251 6 256 6 1 1 25 44 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 254 251 6 256 6 1 1 25 44 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 255 251 6 256 6 0 0 23 42 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 256 256 5 256 6 1 1 26 45 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 257 257 6 257 5 1 1 26 45 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 54 ] 43 52 u a - - MP 258 257 6 262 6 2 2 24 43 -8.904 -8.844 -0.024 -7.620 -7.900 -8.295 -3.313 -3.053 -3.232 0.572 -2.395 -3.863 1.905 -3.013 -3.251 1.054 -3.658 -0.958 2.592 -3.481 -0.092 -2.143 ML 259 257 6 262 6 1 1 24 43 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 260 257 6 262 6 1 1 23 42 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 261 257 6 262 6 0 0 22 41 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 262 262 5 262 6 1 1 24 43 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 263 263 6 263 5 1 1 24 43 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 55 ] 44 51 C G - - MP 264 263 6 268 4 2 2 22 41 -6.339 -6.546 -0.082 -4.961 -3.572 -3.345 -3.410 0.306 -2.397 -3.942 3.056 -3.094 -3.442 0.783 -3.790 -1.273 1.192 -3.693 -0.095 -2.321 ML 265 263 6 268 4 1 1 23 42 -3.758 -3.940 -0.507 -2.670 0.368 -0.385 -0.191 0.094 MR 266 263 6 268 4 1 1 22 41 -4.809 -3.838 -1.706 -0.766 0.368 -0.385 -0.191 0.094 D 267 263 6 268 4 0 0 21 40 -4.568 -4.250 -2.265 -0.520 IL 268 268 5 268 4 1 1 24 43 -1.686 -2.369 -1.117 -4.855 0.000 0.000 0.000 0.000 IR 269 269 6 269 3 1 1 23 42 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 56 ] 45 - A - - - ML 270 269 6 272 3 1 1 19 38 -7.409 -0.030 -6.063 1.337 -1.311 -1.044 -0.772 D 271 269 6 272 3 0 0 18 37 -6.174 -1.687 -0.566 IL 272 272 3 272 3 1 1 22 41 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 57 ] 46 - U - - - ML 273 272 3 275 3 1 1 18 37 -7.409 -0.030 -6.063 -0.547 -0.735 -1.207 1.190 D 274 272 3 275 3 0 0 17 36 -6.174 -1.687 -0.566 IL 275 275 3 275 3 1 1 21 40 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 58 ] 47 - G - - - ML 276 275 3 278 3 1 1 17 35 -7.409 -0.030 -6.063 -0.448 -1.446 1.228 -0.842 D 277 275 3 278 3 0 0 16 35 -6.174 -1.687 -0.566 IL 278 278 3 278 3 1 1 20 39 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 59 ] 48 - g - - - ML 279 278 3 281 3 1 1 15 34 -7.409 -0.030 -6.063 0.367 -1.010 0.546 -0.408 D 280 278 3 281 3 0 0 15 33 -6.174 -1.687 -0.566 IL 281 281 3 281 3 1 1 19 37 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 60 ] 49 - C - - - ML 282 281 3 284 3 1 1 13 32 -7.409 -0.030 -6.063 -0.544 1.033 -1.293 -0.218 D 283 281 3 284 3 0 0 13 32 -6.174 -1.687 -0.566 IL 284 284 3 284 3 1 1 18 36 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 61 ] 50 - C - - - ML 285 284 3 287 2 1 1 1 1 * 0.000 -0.544 1.033 -1.293 -0.218 D 286 284 3 287 2 0 0 0 0 * 0.000 IL 287 287 3 287 2 1 1 13 28 -1.823 -0.479 0.000 0.000 0.000 0.000 [ END 62 ] - - - - - - E 288 287 3 -1 0 0 0 0 0 // HMMER3/f [3.4 | Aug 2023] NAME mir-8830 ACC RF03949 DESC mir-8830 microRNA precursor family LENG 95 MAXL 194 ALPH RNA RF no MM no CONS yes CS yes MAP yes DATE Tue Jul 16 18:49:43 2024 COM [1] /hps/software/users/agb/rfam/bin/cmbuild -F CM SEED COM [2] /hps/software/users/agb/rfam/bin/cmcalibrate --cpu 8 /nfs/production/agb/rfam/15/rescan/families/RF03949/CM NSEQ 3 EFFN 1.549805 CKSUM 1020836267 STATS LOCAL MSV -8.7259 0.71883 STATS LOCAL VITERBI -10.4942 0.71883 STATS LOCAL FORWARD -3.2305 0.71883 HMM A C G U m->m m->i m->d i->m i->i d->m d->d COMPO 1.65172 1.13704 1.26231 1.58711 1.38629 1.38629 1.38629 1.38629 0.21228 3.68932 1.79414 1.46634 0.26236 0.00000 * 1 2.00510 0.49718 2.54421 1.72276 1 C - - : 1.38629 1.38629 1.38629 1.38629 0.05996 3.53700 3.53700 1.46634 0.26236 2.15799 0.12280 2 0.34767 2.52331 2.31832 2.16254 2 A - - : 1.38629 1.38629 1.38629 1.38629 0.05996 3.53700 3.53700 1.46634 0.26236 2.15799 0.12280 3 1.66309 2.18867 0.55194 2.09922 3 G - - < 1.38629 1.38629 1.38629 1.38629 0.05996 3.53700 3.53700 1.46634 0.26236 2.15799 0.12280 4 2.13255 2.45957 0.34682 2.41841 4 G - - < 1.38629 1.38629 1.38629 1.38629 0.05996 3.53700 3.53700 1.46634 0.26236 2.15799 0.12280 5 0.34767 2.52331 2.31832 2.16254 5 A - - - 1.38629 1.38629 1.38629 1.38629 0.05996 3.53700 3.53700 1.46634 0.26236 0.26281 1.46485 6 2.77800 0.36916 2.49906 1.80568 6 C - - < 1.38629 1.38629 1.38629 1.38629 0.05127 3.68932 3.68932 1.46634 0.26236 1.09861 0.40547 7 2.78175 0.36852 2.50055 1.80624 7 C - - < 1.38629 1.38629 1.38629 1.38629 0.05127 3.68932 3.68932 1.46634 0.26236 1.09861 0.40547 8 2.02712 1.80974 0.54665 2.07383 8 G - - < 1.38629 1.38629 1.38629 1.38629 0.05127 3.68932 3.68932 1.46634 0.26236 1.09861 0.40547 9 2.31941 2.79497 0.25329 2.74400 9 G - - < 1.38629 1.38629 1.38629 1.38629 0.05127 3.68932 3.68932 1.46634 0.26236 1.09861 0.40547 10 2.34207 0.33972 2.90270 1.98760 10 C - - - 1.38629 1.38629 1.38629 1.38629 0.05127 3.68932 3.68932 1.46634 0.26236 1.09861 0.40547 11 2.27876 1.36583 2.01593 0.67487 11 U - - < 1.38629 1.38629 1.38629 1.38629 0.05127 3.68932 3.68932 1.46634 0.26236 1.09861 0.40547 12 2.55676 1.39017 2.29232 0.55795 12 U - - < 1.38629 1.38629 1.38629 1.38629 0.05127 3.68932 3.68932 1.46634 0.26236 1.09861 0.40547 13 2.34207 0.33972 2.90270 1.98760 13 C - - - 1.38629 1.38629 1.38629 1.38629 0.05127 3.68932 3.68932 1.46634 0.26236 1.09861 0.40547 14 2.77996 0.36883 2.49984 1.80597 14 C - - < 1.38629 1.38629 1.38629 1.38629 0.05127 3.68932 3.68932 1.46634 0.26236 1.09861 0.40547 15 2.78406 0.36812 2.50147 1.80658 15 C - - < 1.38629 1.38629 1.38629 1.38629 0.05127 3.68932 3.68932 1.46634 0.26236 1.09861 0.40547 16 2.54693 1.60193 2.24121 0.48802 16 U - - < 1.38629 1.38629 1.38629 1.38629 0.05127 3.68932 3.68932 1.46634 0.26236 1.09861 0.40547 17 2.78574 0.36783 2.50213 1.80683 17 C - - < 1.38629 1.38629 1.38629 1.38629 0.05127 3.68932 3.68932 1.46634 0.26236 1.09861 0.40547 18 2.32034 2.79583 0.25300 2.74528 18 G - - < 1.38629 1.38629 1.38629 1.38629 0.05127 3.68932 3.68932 1.46634 0.26236 1.09861 0.40547 19 2.31554 1.35396 2.06486 0.66119 19 U - - < 1.38629 1.38629 1.38629 1.38629 0.05127 3.68932 3.68932 1.46634 0.26236 1.09861 0.40547 20 2.77217 0.37017 2.49674 1.80481 20 C - - < 1.38629 1.38629 1.38629 1.38629 0.05127 3.68932 3.68932 1.46634 0.26236 1.09861 0.40547 21 1.75009 2.46767 0.43453 2.36566 21 G - - < 1.38629 1.38629 1.38629 1.38629 0.05127 3.68932 3.68932 1.46634 0.26236 1.09861 0.40547 22 2.34207 0.33972 2.90270 1.98760 22 C - - - 1.38629 1.38629 1.38629 1.38629 0.05127 3.68932 3.68932 1.46634 0.26236 1.09861 0.40547 23 2.54479 1.60197 2.24048 0.48841 23 U - - < 1.38629 1.38629 1.38629 1.38629 0.05127 3.68932 3.68932 1.46634 0.26236 1.09861 0.40547 24 2.31970 2.79524 0.25320 2.74440 24 G - - < 1.38629 1.38629 1.38629 1.38629 0.05127 3.68932 3.68932 1.46634 0.26236 1.09861 0.40547 25 0.55897 2.30375 1.49934 2.25341 25 A - - < 1.38629 1.38629 1.38629 1.38629 0.05127 3.68932 3.68932 1.46634 0.26236 1.09861 0.40547 26 2.31991 2.79544 0.25314 2.74469 26 G - - < 1.38629 1.38629 1.38629 1.38629 0.05127 3.68932 3.68932 1.46634 0.26236 1.09861 0.40547 27 1.92819 2.10776 0.51346 2.00504 27 G - - < 1.38629 1.38629 1.38629 1.38629 0.05127 3.68932 3.68932 1.46634 0.26236 1.09861 0.40547 28 2.34207 0.33972 2.90270 1.98760 28 C - - - 1.38629 1.38629 1.38629 1.38629 0.05127 3.68932 3.68932 1.46634 0.26236 1.09861 0.40547 29 0.55948 2.30268 1.49937 2.25161 29 A - - < 1.38629 1.38629 1.38629 1.38629 0.05127 3.68932 3.68932 1.46634 0.26236 1.09861 0.40547 30 1.75130 2.46944 0.43360 2.36825 30 G - - < 1.38629 1.38629 1.38629 1.38629 0.05127 3.68932 3.68932 1.46634 0.26236 1.09861 0.40547 31 2.32032 2.79582 0.25301 2.74526 31 G - - < 1.38629 1.38629 1.38629 1.38629 0.05127 3.68932 3.68932 1.46634 0.26236 1.09861 0.40547 32 0.24665 2.81917 2.58527 2.48227 32 A - - - 1.38629 1.38629 1.38629 1.38629 0.05127 3.68932 3.68932 1.46634 0.26236 1.09861 0.40547 33 2.78355 0.36821 2.50126 1.80650 33 C - - < 1.38629 1.38629 1.38629 1.38629 0.05127 3.68932 3.68932 1.46634 0.26236 1.09861 0.40547 34 2.78499 0.36796 2.50183 1.80672 34 C - - < 1.38629 1.38629 1.38629 1.38629 0.05127 3.68932 3.68932 1.46634 0.26236 1.09861 0.40547 35 2.32023 2.79574 0.25304 2.74513 35 G - - < 1.38629 1.38629 1.38629 1.38629 0.05127 3.68932 3.68932 1.46634 0.26236 1.09861 0.40547 36 0.24665 2.81917 2.58527 2.48227 36 A - - - 1.38629 1.38629 1.38629 1.38629 0.05127 3.68932 3.68932 1.46634 0.26236 1.09861 0.40547 37 2.39370 0.53871 2.19739 1.54124 37 C - - < 1.38629 1.38629 1.38629 1.38629 0.05127 3.68932 3.68932 1.46634 0.26236 1.09861 0.40547 38 2.55662 1.39018 2.29227 0.55798 38 U - - < 1.38629 1.38629 1.38629 1.38629 0.05127 3.68932 3.68932 1.46634 0.26236 1.09861 0.40547 39 2.54681 1.60194 2.24117 0.48804 39 U - - < 1.38629 1.38629 1.38629 1.38629 0.05127 3.68932 3.68932 1.46634 0.26236 1.09861 0.40547 40 2.34207 0.33972 2.90270 1.98760 40 C - - - 1.38629 1.38629 1.38629 1.38629 0.05127 3.68932 3.68932 1.46634 0.26236 1.09861 0.40547 41 2.78056 0.36872 2.50008 1.80606 41 C - - < 1.38629 1.38629 1.38629 1.38629 0.05127 3.68932 3.68932 1.46634 0.26236 1.09861 0.40547 42 2.78441 0.36806 2.50161 1.80663 42 C - - < 1.38629 1.38629 1.38629 1.38629 0.05127 3.68932 3.68932 1.46634 0.26236 1.09861 0.40547 43 2.54710 1.60193 2.24126 0.48799 43 U - - < 1.38629 1.38629 1.38629 1.38629 0.05127 3.68932 3.68932 1.46634 0.26236 1.09861 0.40547 44 2.78589 0.36781 2.50219 1.80685 44 C - - < 1.38629 1.38629 1.38629 1.38629 0.05127 3.68932 3.68932 1.46634 0.26236 1.09861 0.40547 45 0.24665 2.81917 2.58527 2.48227 45 A - - _ 1.38629 1.38629 1.38629 1.38629 0.05127 3.68932 3.68932 1.46634 0.26236 1.09861 0.40547 46 2.22521 2.25707 2.72271 0.32628 46 U - - _ 1.38629 1.38629 1.38629 1.38629 0.05127 3.68932 3.68932 1.46634 0.26236 1.09861 0.40547 47 2.25650 3.06464 0.25215 2.63831 47 G - - _ 1.38629 1.38629 1.38629 1.38629 0.05127 3.68932 3.68932 1.46634 0.26236 1.09861 0.40547 48 1.13618 2.33048 0.83407 1.91441 48 g - - _ 1.38629 1.38629 1.38629 1.38629 0.05127 3.68932 3.68932 1.46634 0.26236 1.09861 0.40547 49 2.34207 0.33972 2.90270 1.98760 49 C - - _ 1.38629 1.38629 1.38629 1.38629 0.05127 3.68932 3.68932 1.46634 0.26236 1.09861 0.40547 50 2.34207 0.33972 2.90270 1.98760 50 C - - _ 1.38629 1.38629 1.38629 1.38629 0.05127 3.68932 3.68932 1.46634 0.26236 1.09861 0.40547 51 2.08056 2.66854 0.31863 2.54289 51 G - - > 1.38629 1.38629 1.38629 1.38629 0.05127 3.68932 3.68932 1.46634 0.26236 1.09861 0.40547 52 0.55602 2.41769 1.43836 2.30190 52 A - - > 1.38629 1.38629 1.38629 1.38629 0.05127 3.68932 3.68932 1.46634 0.26236 1.09861 0.40547 53 2.08165 2.66975 0.31815 2.54453 53 G - - > 1.38629 1.38629 1.38629 1.38629 0.05127 3.68932 3.68932 1.46634 0.26236 1.09861 0.40547 54 2.08234 2.67052 0.31784 2.54558 54 G - - > 1.38629 1.38629 1.38629 1.38629 0.05127 3.68932 3.68932 1.46634 0.26236 1.09861 0.40547 55 2.34207 0.33972 2.90270 1.98760 55 C - - - 1.38629 1.38629 1.38629 1.38629 0.05127 3.68932 3.68932 1.46634 0.26236 1.09861 0.40547 56 0.55604 2.41762 1.43836 2.30180 56 A - - > 1.38629 1.38629 1.38629 1.38629 0.05127 3.68932 3.68932 1.46634 0.26236 1.09861 0.40547 57 1.87512 2.46419 0.41167 2.31223 57 G - - > 1.38629 1.38629 1.38629 1.38629 0.05127 3.68932 3.68932 1.46634 0.26236 1.09861 0.40547 58 1.36408 2.36340 0.62075 2.18262 58 G - - > 1.38629 1.38629 1.38629 1.38629 0.05127 3.68932 3.68932 1.46634 0.26236 1.09861 0.40547 59 0.79098 1.49588 2.08180 1.62027 59 a - - - 1.38629 1.38629 1.38629 1.38629 0.05127 3.68932 3.68932 1.46634 0.26236 1.09861 0.40547 60 2.34207 0.33972 2.90270 1.98760 60 C - - - 1.38629 1.38629 1.38629 1.38629 0.05127 3.68932 3.68932 1.46634 0.26236 1.09861 0.40547 61 2.95840 0.29623 2.62271 2.02591 61 C - - > 1.38629 1.38629 1.38629 1.38629 0.05127 3.68932 3.68932 1.46634 0.26236 1.09861 0.40547 62 2.07669 2.66424 0.32034 2.53705 62 G - - > 1.38629 1.38629 1.38629 1.38629 0.05127 3.68932 3.68932 1.46634 0.26236 1.09861 0.40547 63 2.07387 2.66110 0.32159 2.53280 63 G - - > 1.38629 1.38629 1.38629 1.38629 0.05127 3.68932 3.68932 1.46634 0.26236 1.09861 0.40547 64 2.96805 0.29486 2.62643 2.02779 64 C - - > 1.38629 1.38629 1.38629 1.38629 0.05127 3.68932 3.68932 1.46634 0.26236 1.09861 0.40547 65 2.59281 1.56385 2.27845 0.48871 65 U - - > 1.38629 1.38629 1.38629 1.38629 0.05127 3.68932 3.68932 1.46634 0.26236 1.09861 0.40547 66 2.48971 1.74757 2.12143 0.47319 66 U - - > 1.38629 1.38629 1.38629 1.38629 0.05127 3.68932 3.68932 1.46634 0.26236 1.09861 0.40547 67 1.82693 0.89155 2.36693 1.09271 67 c - - - 1.38629 1.38629 1.38629 1.38629 0.05127 3.68932 3.68932 1.46634 0.26236 1.09861 0.40547 68 2.23336 0.69447 1.57928 1.67468 68 c - - > 1.38629 1.38629 1.38629 1.38629 0.05127 3.68932 3.68932 1.46634 0.26236 1.09861 0.40547 69 2.95951 0.29607 2.62314 2.02613 69 C - - > 1.38629 1.38629 1.38629 1.38629 0.05127 3.68932 3.68932 1.46634 0.26236 1.09861 0.40547 70 2.48133 1.74728 2.11902 0.47486 70 U - - > 1.38629 1.38629 1.38629 1.38629 0.05127 3.68932 3.68932 1.46634 0.26236 1.09861 0.40547 71 2.95149 0.29721 2.62003 2.02455 71 C - - > 1.38629 1.38629 1.38629 1.38629 0.05127 3.68932 3.68932 1.46634 0.26236 1.09861 0.40547 72 0.55832 2.41166 1.43876 2.29317 72 A - - > 1.38629 1.38629 1.38629 1.38629 0.05127 3.68932 3.68932 1.46634 0.26236 1.09861 0.40547 73 2.58782 1.56398 2.27673 0.48956 73 U - - > 1.38629 1.38629 1.38629 1.38629 0.05127 3.68932 3.68932 1.46634 0.26236 1.09861 0.40547 74 2.07934 2.66718 0.31916 2.54105 74 G - - > 1.38629 1.38629 1.38629 1.38629 0.05127 3.68932 3.68932 1.46634 0.26236 1.09861 0.40547 75 1.28788 2.23063 0.70413 2.10255 75 g - - > 1.38629 1.38629 1.38629 1.38629 0.05127 3.68932 3.68932 1.46634 0.26236 1.09861 0.40547 76 2.34207 0.33972 2.90270 1.98760 76 C - - - 1.38629 1.38629 1.38629 1.38629 0.05127 3.68932 3.68932 1.46634 0.26236 1.09861 0.40547 77 2.96511 0.29528 2.62530 2.02722 77 C - - > 1.38629 1.38629 1.38629 1.38629 0.05127 3.68932 3.68932 1.46634 0.26236 1.09861 0.40547 78 2.08052 2.66849 0.31865 2.54282 78 G - - > 1.38629 1.38629 1.38629 1.38629 0.05127 3.68932 3.68932 1.46634 0.26236 1.09861 0.40547 79 0.55603 2.41765 1.43836 2.30184 79 A - - > 1.38629 1.38629 1.38629 1.38629 0.05127 3.68932 3.68932 1.46634 0.26236 1.09861 0.40547 80 2.08158 2.66967 0.31817 2.54444 80 G - - > 1.38629 1.38629 1.38629 1.38629 0.05127 3.68932 3.68932 1.46634 0.26236 1.09861 0.40547 81 2.08226 2.67043 0.31788 2.54546 81 G - - > 1.38629 1.38629 1.38629 1.38629 0.05127 3.68932 3.68932 1.46634 0.26236 1.09861 0.40547 82 2.34207 0.33972 2.90270 1.98760 82 C - - - 1.38629 1.38629 1.38629 1.38629 0.05127 3.68932 3.68932 1.46634 0.26236 1.09861 0.40547 83 0.24665 2.81917 2.58527 2.48227 83 A - - - 1.38629 1.38629 1.38629 1.38629 0.05127 3.68932 3.68932 1.46634 0.26236 1.09861 0.40547 84 1.87514 2.46422 0.41165 2.31227 84 G - - > 1.38629 1.38629 1.38629 1.38629 0.05127 3.68932 3.68932 1.46634 0.26236 1.09861 0.40547 85 0.99596 2.18064 0.94177 2.05787 85 g - - > 1.38629 1.38629 1.38629 1.38629 0.05127 3.68932 3.68932 1.46634 0.26236 1.09861 0.40547 86 1.19495 1.00606 2.15307 1.53481 86 c - - - 1.38629 1.38629 1.38629 1.38629 0.05127 3.68932 3.68932 1.46634 0.26236 1.09861 0.40547 87 2.95800 0.29628 2.62256 2.02583 87 C - - > 1.38629 1.38629 1.38629 1.38629 0.05127 3.68932 3.68932 1.46634 0.26236 1.09861 0.40547 88 2.30238 0.52001 1.98692 1.78172 88 C - - > 1.38629 1.38629 1.38629 1.38629 0.05127 3.68932 3.68932 1.46634 0.26236 1.09861 0.40547 89 2.07488 2.66223 0.32114 2.53432 89 G - - > 1.38629 1.38629 1.38629 1.38629 0.05127 3.68932 3.68932 1.46634 0.26236 1.09861 0.40547 90 2.07092 2.65783 0.32291 2.52837 90 G - - > 1.38629 1.38629 1.38629 1.38629 0.21228 3.68932 1.79414 1.46634 0.26236 1.09861 0.40547 91 2.64885 0.39903 2.29049 1.85100 91 C - - > 1.38629 1.38629 1.38629 1.38629 0.05996 3.53700 3.53700 1.46634 0.26236 2.15799 0.12280 92 2.33080 1.35233 2.00532 0.67427 92 U - - > 1.38629 1.38629 1.38629 1.38629 0.05996 3.53700 3.53700 1.46634 0.26236 2.15799 0.12280 93 1.96434 2.04773 2.44179 0.44049 93 U - - : 1.38629 1.38629 1.38629 1.38629 0.05996 3.53700 3.53700 1.46634 0.26236 2.15799 0.12280 94 2.00510 0.49718 2.54421 1.72276 94 C - - : 1.38629 1.38629 1.38629 1.38629 0.05996 3.53700 3.53700 1.46634 0.26236 2.15799 0.12280 95 1.48018 1.33101 1.27892 1.47031 95 g - - : 1.38629 1.38629 1.38629 1.38629 0.03043 3.50747 * 1.46634 0.26236 0.00000 * //