INFERNAL1/a [1.1.5 | Sep 2023] NAME mir-4922 ACC RF03918 DESC mir-4922 microRNA precursor family STATES 199 NODES 47 CLEN 65 W 81 ALPH RNA RF no CONS yes MAP yes DATE Fri Jul 5 21:10:57 2024 COM [1] /hps/software/users/agb/rfam/bin/cmbuild -F CM SEED COM [2] /hps/software/users/agb/rfam/bin/cmcalibrate --cpu 8 /nfs/production/agb/rfam/15/rescan/families/RF03918/CM PBEGIN 0.05 PEND 0.05 WBETA 1e-07 QDBBETA1 1e-07 QDBBETA2 1e-15 N2OMEGA 1.52588e-05 N3OMEGA 1.52588e-05 ELSELF -0.08926734 NSEQ 2 EFFN 1.660156 CKSUM 1115262848 NULL 0.000 0.000 0.000 0.000 GA 82.00 TC 82.90 NC 48.80 EFP7GF -4.7539 0.72694 ECMLC 0.60455 -5.43386 3.95033 1600000 349153 0.003437 ECMGC 0.44732 -11.58225 1.22919 1600000 123283 0.003245 ECMLI 0.56936 -4.24778 5.21220 1600000 262030 0.004580 ECMGI 0.48225 -6.87123 4.19186 1600000 83008 0.004819 CM [ ROOT 0 ] - - - - - - S 0 -1 0 1 4 1 1 81 101 -6.759 -8.005 -0.087 -4.458 IL 1 1 2 1 4 1 12 82 102 -2.817 -4.319 -0.613 -2.698 0.000 0.000 0.000 0.000 IR 2 2 3 2 3 1 13 83 103 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 1 ] - 65 - G - - MR 3 2 3 5 3 1 14 81 101 -8.256 -0.020 -6.573 -1.353 -2.536 1.666 -1.922 D 4 2 3 5 3 0 8 79 99 -6.390 -1.568 -0.620 IR 5 5 3 5 3 1 13 82 102 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 2 ] - 64 - A - - MR 6 5 3 8 5 1 14 80 100 -7.001 -0.042 -6.817 -7.029 -7.920 1.669 -2.158 -1.812 -1.681 D 7 5 3 8 5 0 7 79 99 -5.352 -0.707 -2.978 -4.409 -2.404 IR 8 8 3 8 5 1 11 80 100 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 3 ] 1 63 G C - - MP 9 8 3 13 6 2 15 79 99 -9.065 -9.004 -0.022 -7.781 -8.060 -8.455 -4.538 -2.997 -4.620 0.334 -4.945 -4.612 -0.360 -4.847 -4.191 3.585 -4.544 -0.690 -0.751 -4.333 -2.386 -3.500 ML 10 8 3 13 6 1 9 77 97 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 11 8 3 13 6 1 9 77 97 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 12 8 3 13 6 0 5 75 95 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 13 13 5 13 6 1 10 79 99 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 14 14 6 14 5 1 11 78 98 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 4 ] 2 62 U A - - MP 15 14 6 19 6 2 15 77 97 -9.065 -9.004 -0.022 -7.781 -8.060 -8.455 -3.973 -3.791 -3.835 -0.102 -2.825 -4.419 1.498 -3.505 -3.842 0.187 -4.226 -1.696 3.213 -4.132 -0.506 -2.687 ML 16 14 6 19 6 1 9 75 95 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 17 14 6 19 6 1 9 75 95 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 18 14 6 19 6 0 5 73 93 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 19 19 5 19 6 1 10 77 97 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 20 20 6 20 5 1 10 76 96 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 5 ] 3 61 G C - - MP 21 20 6 25 6 2 14 75 95 -9.065 -9.004 -0.022 -7.781 -8.060 -8.455 -4.538 -2.997 -4.620 0.334 -4.945 -4.612 -0.360 -4.847 -4.191 3.585 -4.544 -0.690 -0.751 -4.333 -2.386 -3.500 ML 22 20 6 25 6 1 8 73 93 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 23 20 6 25 6 1 8 73 93 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 24 20 6 25 6 0 4 71 91 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 25 25 5 25 6 1 10 75 95 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 26 26 6 26 5 1 10 74 94 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 6 ] 4 60 A U - - MP 27 26 6 31 6 2 14 73 93 -9.065 -9.004 -0.022 -7.781 -8.060 -8.455 -3.621 -2.697 -3.651 3.208 -3.905 -4.953 0.384 -3.703 -3.551 1.263 -4.090 -0.203 -0.034 -4.169 -1.558 -2.496 ML 28 26 6 31 6 1 8 71 91 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 29 26 6 31 6 1 8 71 91 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 30 26 6 31 6 0 4 69 89 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 31 31 5 31 6 1 9 73 93 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 32 32 6 32 5 1 10 72 92 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 7 ] 5 59 g u - - MP 33 32 6 37 6 2 14 71 91 -9.065 -9.004 -0.022 -7.781 -8.060 -8.455 -3.484 -2.305 -3.639 1.211 -4.247 -4.974 0.121 -3.681 -3.339 1.536 -3.853 2.929 -0.239 -4.208 -1.820 -2.369 ML 34 32 6 37 6 1 8 69 89 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 35 32 6 37 6 1 8 69 89 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 36 32 6 37 6 0 4 67 87 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 37 37 5 37 6 1 9 71 91 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 38 38 6 38 5 1 9 70 90 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 8 ] 6 58 U A - - MP 39 38 6 43 6 2 13 69 89 -9.065 -9.004 -0.022 -7.781 -8.060 -8.455 -3.973 -3.791 -3.835 -0.102 -2.825 -4.419 1.498 -3.505 -3.842 0.187 -4.226 -1.696 3.213 -4.132 -0.506 -2.687 ML 40 38 6 43 6 1 7 67 87 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 41 38 6 43 6 1 7 67 87 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 42 38 6 43 6 0 3 65 85 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 43 43 5 43 6 1 9 69 89 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 44 44 6 44 5 1 9 68 88 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 9 ] 7 57 A U - - MP 45 44 6 49 6 2 13 67 87 -9.065 -9.004 -0.022 -7.781 -8.060 -8.455 -3.621 -2.697 -3.651 3.208 -3.905 -4.953 0.384 -3.703 -3.551 1.263 -4.090 -0.203 -0.034 -4.169 -1.558 -2.496 ML 46 44 6 49 6 1 7 65 85 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 47 44 6 49 6 1 7 65 85 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 48 44 6 49 6 0 3 63 83 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 49 49 5 49 6 1 8 67 87 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 50 50 6 50 5 1 9 66 86 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 10 ] 8 56 G C - - MP 51 50 6 55 6 2 12 65 85 -9.065 -9.004 -0.022 -7.781 -8.060 -8.455 -4.538 -2.997 -4.620 0.334 -4.945 -4.612 -0.360 -4.847 -4.191 3.585 -4.544 -0.690 -0.751 -4.333 -2.386 -3.500 ML 52 50 6 55 6 1 7 63 83 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 53 50 6 55 6 1 7 63 83 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 54 50 6 55 6 0 3 61 81 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 55 55 5 55 6 1 8 65 85 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 56 56 6 56 5 1 8 64 84 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 11 ] 9 55 a u - - MP 57 56 6 61 6 2 11 63 83 -9.065 -9.004 -0.022 -7.781 -8.060 -8.455 -3.224 -2.283 -3.338 2.349 -3.837 -4.542 0.391 -3.521 -3.216 1.722 -3.748 1.912 0.122 -3.709 -1.502 -2.192 ML 58 56 6 61 6 1 6 61 82 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 59 56 6 61 6 1 6 61 81 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 60 56 6 61 6 0 2 59 79 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 61 61 5 61 6 1 8 63 83 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 62 62 6 62 5 1 8 62 82 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 12 ] 10 54 A U - - MP 63 62 6 67 6 2 10 61 81 -9.065 -9.004 -0.022 -7.781 -8.060 -8.455 -3.621 -2.697 -3.651 3.208 -3.905 -4.953 0.384 -3.703 -3.551 1.263 -4.090 -0.203 -0.034 -4.169 -1.558 -2.496 ML 64 62 6 67 6 1 6 60 80 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 65 62 6 67 6 1 5 59 80 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 66 62 6 67 6 0 2 57 77 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 67 67 5 67 6 1 7 61 81 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 68 68 6 68 5 1 7 60 80 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 13 ] 11 53 C G - - MP 69 68 6 73 6 2 9 59 79 -9.065 -9.004 -0.022 -7.781 -8.060 -8.455 -4.337 -4.223 -4.062 -0.476 -2.829 -4.502 3.480 -3.617 -4.105 -0.203 -4.388 -2.168 0.706 -4.420 -0.531 -2.953 ML 70 68 6 73 6 1 5 58 78 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 71 68 6 73 6 1 4 58 78 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 72 68 6 73 6 0 2 56 76 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 73 73 5 73 6 1 6 59 79 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 74 74 6 74 5 1 6 58 78 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 14 ] 12 52 A U - - MP 75 74 6 79 4 2 7 57 77 -6.833 -7.040 -0.058 -5.454 -3.621 -2.697 -3.651 3.208 -3.905 -4.953 0.384 -3.703 -3.551 1.263 -4.090 -0.203 -0.034 -4.169 -1.558 -2.496 ML 76 74 6 79 4 1 4 57 77 -3.758 -3.940 -0.507 -2.670 0.368 -0.385 -0.191 0.094 MR 77 74 6 79 4 1 3 57 77 -4.809 -3.838 -1.706 -0.766 0.368 -0.385 -0.191 0.094 D 78 74 6 79 4 0 2 56 76 -4.568 -4.250 -2.265 -0.520 IL 79 79 5 79 4 1 6 58 79 -1.686 -2.369 -1.117 -4.855 0.000 0.000 0.000 0.000 IR 80 80 6 80 3 1 5 58 78 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 15 ] 13 - A - - - ML 81 80 6 83 3 1 6 55 74 -8.256 -0.020 -6.573 1.669 -2.158 -1.812 -1.681 D 82 80 6 83 3 0 1 53 73 -5.620 -0.734 -1.403 IL 83 83 3 83 3 1 4 55 75 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 16 ] - 51 - C - - MR 84 83 3 86 5 1 5 54 73 -7.001 -0.042 -6.817 -7.029 -7.920 -1.486 1.548 -2.300 -0.953 D 85 83 3 86 5 0 0 52 72 -5.352 -0.707 -2.978 -4.409 -2.404 IR 86 86 3 86 5 1 3 54 74 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 17 ] 14 50 U A - - MP 87 86 3 91 6 2 4 53 72 -9.065 -9.004 -0.022 -7.781 -8.060 -8.455 -3.973 -3.791 -3.835 -0.102 -2.825 -4.419 1.498 -3.505 -3.842 0.187 -4.226 -1.696 3.213 -4.132 -0.506 -2.687 ML 88 86 3 91 6 1 2 52 72 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 89 86 3 91 6 1 2 52 72 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 90 86 3 91 6 0 0 50 70 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 91 91 5 91 6 1 2 52 72 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 92 92 6 92 5 1 2 52 72 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 18 ] 15 49 U A - - MP 93 92 6 97 4 2 2 51 70 -6.833 -7.040 -0.503 -1.846 -3.973 -3.791 -3.835 -0.102 -2.825 -4.419 1.498 -3.505 -3.842 0.187 -4.226 -1.696 3.213 -4.132 -0.506 -2.687 ML 94 92 6 97 4 1 1 51 71 -3.758 -3.940 -0.507 -2.670 0.368 -0.385 -0.191 0.094 MR 95 92 6 97 4 1 1 50 71 -4.809 -3.838 -1.706 -0.766 0.368 -0.385 -0.191 0.094 D 96 92 6 97 4 0 0 49 70 -4.568 -4.250 -2.265 -0.520 IL 97 97 5 97 4 1 2 52 72 -1.686 -2.369 -1.117 -4.855 0.000 0.000 0.000 0.000 IR 98 98 6 98 3 1 2 51 71 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 19 ] 16 - U - - - ML 99 98 6 101 3 1 2 48 68 -7.471 -0.029 -6.125 -0.643 -0.807 -1.313 1.254 D 100 98 6 101 3 0 0 47 67 -7.771 -0.373 -2.162 IL 101 101 3 101 3 1 1 50 70 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 20 ] 17 - C - - - ML 102 101 3 104 5 1 1 47 67 -7.001 -0.042 -6.817 -7.029 -7.920 -1.486 1.548 -2.300 -0.953 D 103 101 3 104 5 0 0 46 66 -4.959 -0.803 -4.221 -2.596 -2.508 IL 104 104 3 104 5 1 1 48 67 -2.408 -0.496 -4.087 -5.920 -5.193 0.000 0.000 0.000 0.000 [ MATP 21 ] 18 48 A U - - MP 105 104 3 109 6 2 2 46 66 -9.065 -9.004 -0.022 -7.781 -8.060 -8.455 -3.621 -2.697 -3.651 3.208 -3.905 -4.953 0.384 -3.703 -3.551 1.263 -4.090 -0.203 -0.034 -4.169 -1.558 -2.496 ML 106 104 3 109 6 1 1 45 64 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 107 104 3 109 6 1 1 45 64 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 108 104 3 109 6 0 0 42 62 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 109 109 5 109 6 1 1 46 66 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 110 110 6 110 5 1 1 46 65 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 22 ] 19 47 U A - - MP 111 110 6 115 6 2 2 44 64 -9.065 -9.004 -0.022 -7.781 -8.060 -8.455 -3.973 -3.791 -3.835 -0.102 -2.825 -4.419 1.498 -3.505 -3.842 0.187 -4.226 -1.696 3.213 -4.132 -0.506 -2.687 ML 112 110 6 115 6 1 1 43 63 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 113 110 6 115 6 1 1 43 62 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 114 110 6 115 6 0 0 41 60 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 115 115 5 115 6 1 1 44 64 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 116 116 6 116 5 1 1 44 63 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 23 ] 20 46 A U - - MP 117 116 6 121 6 2 2 42 62 -9.065 -9.004 -0.022 -7.781 -8.060 -8.455 -3.621 -2.697 -3.651 3.208 -3.905 -4.953 0.384 -3.703 -3.551 1.263 -4.090 -0.203 -0.034 -4.169 -1.558 -2.496 ML 118 116 6 121 6 1 1 41 61 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 119 116 6 121 6 1 1 41 61 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 120 116 6 121 6 0 0 40 59 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 121 121 5 121 6 1 1 42 62 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 122 122 6 122 5 1 1 42 61 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 24 ] 21 45 U A - - MP 123 122 6 127 4 2 2 40 60 -6.833 -7.040 -0.058 -5.454 -3.973 -3.791 -3.835 -0.102 -2.825 -4.419 1.498 -3.505 -3.842 0.187 -4.226 -1.696 3.213 -4.132 -0.506 -2.687 ML 124 122 6 127 4 1 1 41 60 -3.758 -3.940 -0.507 -2.670 0.368 -0.385 -0.191 0.094 MR 125 122 6 127 4 1 1 40 60 -4.809 -3.838 -1.706 -0.766 0.368 -0.385 -0.191 0.094 D 126 122 6 127 4 0 0 39 59 -4.568 -4.250 -2.265 -0.520 IL 127 127 5 127 4 1 1 42 62 -1.686 -2.369 -1.117 -4.855 0.000 0.000 0.000 0.000 IR 128 128 6 128 3 1 1 41 61 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 25 ] 22 - U - - - ML 129 128 6 131 3 1 1 38 57 -8.256 -0.020 -6.573 -1.292 -1.323 -2.015 1.558 D 130 128 6 131 3 0 0 37 56 -5.620 -0.734 -1.403 IL 131 131 3 131 3 1 1 39 58 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 26 ] - 44 - U - - MR 132 131 3 134 5 1 1 37 56 -7.001 -0.042 -6.817 -7.029 -7.920 -1.292 -1.323 -2.015 1.558 D 133 131 3 134 5 0 0 36 55 -5.352 -0.707 -2.978 -4.409 -2.404 IR 134 134 3 134 5 1 1 37 57 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 27 ] 23 43 g c - - MP 135 134 3 139 6 2 2 36 55 -9.065 -9.004 -0.022 -7.781 -8.060 -8.455 -3.586 -2.466 -3.644 1.046 -4.180 -4.417 0.244 -3.925 -3.564 2.935 -4.009 1.546 -0.046 -3.752 -1.708 -2.529 ML 136 134 3 139 6 1 1 35 55 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 137 134 3 139 6 1 1 35 54 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 138 134 3 139 6 0 0 33 53 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 139 139 5 139 6 1 1 36 55 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 140 140 6 140 5 1 1 35 55 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 28 ] 24 42 A U - - MP 141 140 6 145 4 2 2 34 53 -6.833 -7.040 -0.058 -5.454 -3.621 -2.697 -3.651 3.208 -3.905 -4.953 0.384 -3.703 -3.551 1.263 -4.090 -0.203 -0.034 -4.169 -1.558 -2.496 ML 142 140 6 145 4 1 1 34 54 -3.758 -3.940 -0.507 -2.670 0.368 -0.385 -0.191 0.094 MR 143 140 6 145 4 1 1 34 53 -4.809 -3.838 -1.706 -0.766 0.368 -0.385 -0.191 0.094 D 144 140 6 145 4 0 0 33 52 -4.568 -4.250 -2.265 -0.520 IL 145 145 5 145 4 1 1 36 55 -1.686 -2.369 -1.117 -4.855 0.000 0.000 0.000 0.000 IR 146 146 6 146 3 1 1 35 54 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 29 ] 25 - A - - - ML 147 146 6 149 3 1 1 31 51 -7.858 -0.022 -6.512 1.669 -2.158 -1.812 -1.681 D 148 146 6 149 3 0 0 30 49 -6.174 -1.687 -0.566 IL 149 149 3 149 3 1 1 34 53 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 30 ] 26 - A - - - ML 150 149 3 152 3 1 1 30 49 -7.858 -0.417 -2.020 1.669 -2.158 -1.812 -1.681 D 151 149 3 152 3 0 0 29 48 -6.174 -1.687 -0.566 IL 152 152 3 152 3 1 1 33 52 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 31 ] 27 - A - - - ML 153 152 3 155 3 1 1 29 48 -7.471 -0.029 -6.125 1.397 -1.421 -1.144 -0.886 D 154 152 3 155 3 0 0 27 46 -7.771 -3.284 -0.164 IL 155 155 3 155 3 1 1 32 51 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 32 ] 28 - A - - - ML 156 155 3 158 3 1 1 28 47 -7.471 -0.029 -6.125 1.397 -1.421 -1.144 -0.886 D 157 155 3 158 3 0 0 26 45 -7.771 -3.284 -0.164 IL 158 158 3 158 3 1 1 31 50 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 33 ] 29 - A - - - ML 159 158 3 161 3 1 1 27 46 -7.471 -0.029 -6.125 1.397 -1.421 -1.144 -0.886 D 160 158 3 161 3 0 0 25 44 -7.771 -3.284 -0.164 IL 161 161 3 161 3 1 1 29 49 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 34 ] 30 - G - - - ML 162 161 3 164 3 1 1 26 45 -7.471 -0.029 -6.125 -0.562 -1.587 1.312 -0.978 D 163 161 3 164 3 0 0 24 43 -7.771 -3.284 -0.164 IL 164 164 3 164 3 1 1 28 48 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 35 ] 31 - U - - - ML 165 164 3 167 3 1 1 25 44 -7.471 -0.029 -6.125 -0.643 -0.807 -1.313 1.254 D 166 164 3 167 3 0 0 23 42 -7.771 -3.284 -0.164 IL 167 167 3 167 3 1 1 27 46 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 36 ] 32 - A - - - ML 168 167 3 170 3 1 1 24 42 -7.471 -0.029 -6.125 1.397 -1.421 -1.144 -0.886 D 169 167 3 170 3 0 0 22 41 -7.771 -0.373 -2.162 IL 170 170 3 170 3 1 1 26 45 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 37 ] 33 - A - - - ML 171 170 3 173 3 1 1 22 41 -7.858 -0.022 -6.512 1.669 -2.158 -1.812 -1.681 D 172 170 3 173 3 0 0 21 40 -6.174 -1.687 -0.566 IL 173 173 3 173 3 1 1 25 44 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 38 ] 34 - u - - - ML 174 173 3 176 3 1 1 21 40 -7.858 -0.022 -6.512 0.537 -0.797 -0.998 0.559 D 175 173 3 176 3 0 0 20 39 -6.174 -1.687 -0.566 IL 176 176 3 176 3 1 1 24 43 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 39 ] 35 - A - - - ML 177 176 3 179 3 1 1 20 39 -7.858 -0.022 -6.512 1.669 -2.158 -1.812 -1.681 D 178 176 3 179 3 0 0 19 38 -6.174 -1.687 -0.566 IL 179 179 3 179 3 1 1 23 42 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 40 ] 36 - U - - - ML 180 179 3 182 3 1 1 19 38 -7.858 -0.022 -6.512 -1.292 -1.323 -2.015 1.558 D 181 179 3 182 3 0 0 18 37 -6.174 -1.687 -0.566 IL 182 182 3 182 3 1 1 22 41 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 41 ] 37 - U - - - ML 183 182 3 185 3 1 1 18 36 -7.858 -0.022 -6.512 -1.292 -1.323 -2.015 1.558 D 184 182 3 185 3 0 0 17 36 -6.174 -1.687 -0.566 IL 185 185 3 185 3 1 1 21 40 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 42 ] 38 - G - - - ML 186 185 3 188 3 1 1 16 35 -7.858 -0.022 -6.512 -1.353 -2.536 1.666 -1.922 D 187 185 3 188 3 0 0 16 34 -6.174 -1.687 -0.566 IL 188 188 3 188 3 1 1 20 38 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 43 ] 39 - U - - - ML 189 188 3 191 3 1 1 15 33 -7.858 -0.022 -6.512 -1.292 -1.323 -2.015 1.558 D 190 188 3 191 3 0 0 15 33 -6.174 -1.687 -0.566 IL 191 191 3 191 3 1 1 19 37 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 44 ] 40 - C - - - ML 192 191 3 194 3 1 1 13 32 -7.858 -0.022 -6.512 -1.486 1.548 -2.300 -0.953 D 193 191 3 194 3 0 0 13 32 -6.174 -1.687 -0.566 IL 194 194 3 194 3 1 1 18 36 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 45 ] 41 - u - - - ML 195 194 3 197 2 1 1 1 1 * 0.000 -0.622 0.421 -1.389 0.705 D 196 194 3 197 2 0 0 0 0 * 0.000 IL 197 197 3 197 2 1 1 13 28 -1.823 -0.479 0.000 0.000 0.000 0.000 [ END 46 ] - - - - - - E 198 197 3 -1 0 0 0 0 0 // HMMER3/f [3.4 | Aug 2023] NAME mir-4922 ACC RF03918 DESC mir-4922 microRNA precursor family LENG 65 MAXL 153 ALPH RNA RF no MM no CONS yes CS yes MAP yes DATE Fri Jul 5 21:10:57 2024 COM [1] /hps/software/users/agb/rfam/bin/cmbuild -F CM SEED COM [2] /hps/software/users/agb/rfam/bin/cmcalibrate --cpu 8 /nfs/production/agb/rfam/15/rescan/families/RF03918/CM NSEQ 2 EFFN 1.800781 CKSUM 1115262848 STATS LOCAL MSV -8.3904 0.72694 STATS LOCAL VITERBI -9.5686 0.72694 STATS LOCAL FORWARD -2.6375 0.72694 HMM A C G U m->m m->i m->d i->m i->i d->m d->d COMPO 1.21385 1.64894 1.55079 1.20861 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 0.00000 * 1 2.40173 2.94196 0.22218 2.88404 1 G - - < 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 2 2.67394 1.69240 2.39095 0.42251 2 U - - < 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 3 2.40709 2.94746 0.22067 2.89193 3 G - - < 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 4 0.47599 2.45056 1.60319 2.39437 4 A - - < 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 5 1.80232 2.61206 0.38592 2.50252 5 G - - < 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 6 2.67692 1.69243 2.39208 0.42203 6 U - - < 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 7 0.47603 2.45046 1.60318 2.39422 7 A - - < 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 8 2.40723 2.94761 0.22063 2.89215 8 G - - < 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 9 1.04189 2.41352 0.79031 2.26328 9 g - - < 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 10 0.47612 2.45021 1.60316 2.39383 10 A - - < 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 11 2.91625 0.31973 2.65608 1.90182 11 C - - < 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 12 0.47617 2.45010 1.60316 2.39365 12 A - - < 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 13 0.21040 2.96067 2.71254 2.63681 13 A - - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 14 2.67429 1.69240 2.39108 0.42245 14 U - - < 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 15 2.67730 1.69244 2.39222 0.42197 15 U - - < 1.38629 1.38629 1.38629 1.38629 0.31958 3.73767 1.38734 1.46634 0.26236 1.09861 0.40547 16 1.87230 1.97628 2.34106 0.49197 16 U - - - 1.38629 1.38629 1.38629 1.38629 0.06349 3.48158 3.48158 1.46634 0.26236 0.17452 1.83171 17 2.50986 0.28409 3.07801 2.12054 17 C - - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 18 0.47673 2.44867 1.60305 2.39140 18 A - - < 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 19 2.67364 1.69240 2.39084 0.42256 19 U - - < 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 20 0.47628 2.44981 1.60314 2.39320 20 A - - < 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 21 2.67518 1.69241 2.39142 0.42231 21 U - - < 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 22 2.35275 2.36145 2.85791 0.28340 22 U - - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 23 1.90129 2.50849 0.39065 2.37931 23 G - - < 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 24 0.47595 2.45066 1.60320 2.39454 24 A - - < 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 25 0.21040 2.96067 2.71254 2.63681 25 A - - _ 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 26 0.21040 2.96067 2.71254 2.63681 26 A - - _ 1.38629 1.38629 1.38629 1.38629 0.31958 3.73767 1.38734 1.46634 0.26236 1.09861 0.40547 27 0.39489 2.41766 2.22221 2.04993 27 A - - _ 1.38629 1.38629 1.38629 1.38629 0.06349 3.48158 3.48158 1.46634 0.26236 2.52485 0.08346 28 0.39489 2.41766 2.22221 2.04993 28 A - - _ 1.38629 1.38629 1.38629 1.38629 0.06349 3.48158 3.48158 1.46634 0.26236 2.52485 0.08346 29 0.39489 2.41766 2.22221 2.04993 29 A - - _ 1.38629 1.38629 1.38629 1.38629 0.06349 3.48158 3.48158 1.46634 0.26236 2.52485 0.08346 30 1.82510 2.54670 0.44503 2.12315 30 G - - _ 1.38629 1.38629 1.38629 1.38629 0.06349 3.48158 3.48158 1.46634 0.26236 2.52485 0.08346 31 1.87230 1.97628 2.34106 0.49197 31 U - - _ 1.38629 1.38629 1.38629 1.38629 0.06349 3.48158 3.48158 1.46634 0.26236 2.52485 0.08346 32 0.39489 2.41766 2.22221 2.04993 32 A - - _ 1.38629 1.38629 1.38629 1.38629 0.06349 3.48158 3.48158 1.46634 0.26236 0.17452 1.83171 33 0.21040 2.96067 2.71254 2.63681 33 A - - _ 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 34 1.00835 1.95657 2.09828 0.99109 34 u - - _ 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 35 0.21040 2.96067 2.71254 2.63681 35 A - - _ 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 36 2.35275 2.36145 2.85791 0.28340 36 U - - _ 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 37 2.35275 2.36145 2.85791 0.28340 37 U - - _ 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 38 2.40814 3.24212 0.20933 2.81665 38 G - - _ 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 39 2.35275 2.36145 2.85791 0.28340 39 U - - _ 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 40 2.50986 0.28409 3.07801 2.12054 40 C - - _ 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 41 1.84795 1.07920 2.38376 0.89070 41 u - - _ 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 42 2.62933 1.86630 2.26707 0.40113 42 U - - > 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 43 2.61589 0.69550 2.32448 1.10795 43 c - - > 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 44 2.35275 2.36145 2.85791 0.28340 44 U - - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 45 0.48090 2.56793 1.52915 2.42630 45 A - - > 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 46 2.61437 1.86527 2.26225 0.40374 46 U - - > 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 47 0.48236 2.56338 1.52912 2.42017 47 A - - > 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 48 2.59526 1.86393 2.25602 0.40715 48 U - - > 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 49 0.47933 2.57287 1.52919 2.43297 49 A - - > 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 50 0.47908 2.57366 1.52919 2.43404 50 A - - > 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 51 2.50986 0.28409 3.07801 2.12054 51 C - - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 52 2.62241 1.86583 2.26484 0.40233 52 U - - > 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 53 2.17541 2.82241 0.27705 2.67422 53 G - - > 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 54 2.62281 1.86586 2.26497 0.40226 54 U - - > 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 55 2.48248 1.52807 2.21815 0.52645 55 U - - > 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 56 3.10491 0.25876 2.77810 2.11188 56 C - - > 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 57 2.62382 1.86592 2.26530 0.40209 57 U - - > 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 58 0.48003 2.57069 1.52917 2.43002 58 A - - > 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 59 2.72007 1.67668 2.41698 0.41863 59 U - - > 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 60 2.62567 1.86605 2.26590 0.40176 60 U - - > 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 61 3.11065 0.25807 2.78043 2.11299 61 C - - > 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 62 0.47955 2.57218 1.52918 2.43204 62 A - - > 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 63 3.11533 0.25751 2.78233 2.11390 63 C - - > 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 64 0.21040 2.96067 2.71254 2.63681 64 A - - : 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 65 2.40814 3.24212 0.20933 2.81665 65 G - - : 1.38629 1.38629 1.38629 1.38629 0.02469 3.71357 * 1.46634 0.26236 0.00000 * //