INFERNAL1/a [1.1.5 | Sep 2023] NAME mir-4428 ACC RF03907 DESC mir-4428 microRNA precursor family STATES 223 NODES 47 CLEN 73 W 89 ALPH RNA RF no CONS yes MAP yes DATE Thu Jul 4 15:03:44 2024 COM [1] /hps/software/users/agb/rfam/bin/cmbuild -F CM SEED COM [2] /hps/software/users/agb/rfam/bin/cmcalibrate --cpu 8 /nfs/production/agb/rfam/15/rescan/families/RF03907/CM PBEGIN 0.05 PEND 0.05 WBETA 1e-07 QDBBETA1 1e-07 QDBBETA2 1e-15 N2OMEGA 1.52588e-05 N3OMEGA 1.52588e-05 ELSELF -0.08926734 NSEQ 2 EFFN 0.980469 CKSUM 18142550 NULL 0.000 0.000 0.000 0.000 GA 90.00 TC 91.20 NC 89.00 EFP7GF -7.7255 0.71950 ECMLC 0.60008 -5.94142 3.43537 1600000 333337 0.003600 ECMGC 0.42482 -15.19710 -2.15238 1600000 102045 0.003920 ECMLI 0.56957 -4.60057 4.70387 1600000 240281 0.004994 ECMGI 0.44192 -10.32358 1.41494 1600000 71607 0.005586 CM [ ROOT 0 ] - - - - - - S 0 -1 0 1 4 1 1 89 110 -6.495 -6.702 -0.073 -5.116 IL 1 1 2 1 4 1 20 93 114 -1.686 -2.369 -1.117 -4.855 0.000 0.000 0.000 0.000 IR 2 2 3 2 3 1 20 92 113 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 1 ] 1 - U - - - ML 3 2 3 5 3 1 20 90 110 -7.970 -0.024 -6.288 -0.767 -0.902 -1.449 1.328 D 4 2 3 5 3 0 15 88 108 -5.620 -0.734 -1.403 IL 5 5 3 5 3 1 19 90 110 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 2 ] - 73 - U - - MR 6 5 3 8 5 1 19 89 109 -6.738 -0.050 -6.553 -6.766 -7.657 -0.767 -0.902 -1.449 1.328 D 7 5 3 8 5 0 12 87 107 -5.352 -0.707 -2.978 -4.409 -2.404 IR 8 8 3 8 5 1 17 89 109 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 3 ] 2 72 u a - - MP 9 8 3 13 6 2 19 88 108 -8.951 -8.890 -0.024 -7.667 -7.946 -8.342 -3.470 -3.244 -3.378 0.398 -2.495 -4.002 1.811 -3.131 -3.394 0.812 -3.798 -1.156 2.806 -3.639 -0.189 -2.277 ML 10 8 3 13 6 1 14 86 106 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 11 8 3 13 6 1 13 86 106 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 12 8 3 13 6 0 9 84 104 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 13 13 5 13 6 1 16 87 107 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 14 14 6 14 5 1 16 87 107 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 4 ] 3 71 G C - - MP 15 14 6 19 6 2 18 86 106 -8.951 -8.890 -0.024 -7.667 -7.946 -8.342 -3.947 -2.723 -4.005 0.701 -4.114 -4.354 0.338 -4.165 -3.760 3.368 -4.161 -0.408 -0.077 -3.935 -1.664 -2.894 ML 16 14 6 19 6 1 13 84 104 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 17 14 6 19 6 1 12 84 104 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 18 14 6 19 6 0 8 82 102 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 19 19 5 19 6 1 15 85 105 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 20 20 6 20 5 1 15 85 105 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 5 ] 4 70 G C - - MP 21 20 6 25 6 2 16 84 104 -8.951 -8.890 -0.024 -7.667 -7.946 -8.342 -3.947 -2.723 -4.005 0.701 -4.114 -4.354 0.338 -4.165 -3.760 3.368 -4.161 -0.408 -0.077 -3.935 -1.664 -2.894 ML 22 20 6 25 6 1 13 83 103 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 23 20 6 25 6 1 11 82 103 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 24 20 6 25 6 0 8 81 101 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 25 25 5 25 6 1 14 83 103 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 26 26 6 26 5 1 14 83 103 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 6 ] 5 69 C G - - MP 27 26 6 31 4 2 14 82 102 -6.495 -6.702 -0.073 -5.116 -3.778 -3.593 -3.588 0.086 -2.506 -4.096 3.210 -3.231 -3.622 0.487 -3.954 -1.531 1.071 -3.891 -0.204 -2.492 ML 28 26 6 31 4 1 11 82 102 -3.758 -3.940 -0.507 -2.670 0.368 -0.385 -0.191 0.094 MR 29 26 6 31 4 1 9 81 101 -4.809 -3.838 -1.706 -0.766 0.368 -0.385 -0.191 0.094 D 30 26 6 31 4 0 8 80 100 -4.568 -4.250 -2.265 -0.520 IL 31 31 5 31 4 1 13 83 103 -1.686 -2.369 -1.117 -4.855 0.000 0.000 0.000 0.000 IR 32 32 6 32 3 1 13 82 102 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 7 ] 6 - A - - - ML 33 32 6 35 5 1 13 79 99 -6.738 -0.050 -6.553 -6.766 -7.657 1.465 -1.563 -1.275 -1.038 D 34 32 6 35 5 0 7 78 98 -4.959 -0.803 -4.221 -2.596 -2.508 IL 35 35 3 35 5 1 11 79 99 -2.408 -0.496 -4.087 -5.920 -5.193 0.000 0.000 0.000 0.000 [ MATP 8 ] 7 68 G C - - MP 36 35 3 40 6 2 13 78 98 -8.951 -8.890 -0.024 -7.667 -7.946 -8.342 -3.947 -2.723 -4.005 0.701 -4.114 -4.354 0.338 -4.165 -3.760 3.368 -4.161 -0.408 -0.077 -3.935 -1.664 -2.894 ML 37 35 3 40 6 1 8 77 97 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 38 35 3 40 6 1 7 77 97 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 39 35 3 40 6 0 4 74 94 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 40 40 5 40 6 1 10 78 98 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 41 41 6 41 5 1 10 77 97 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 9 ] 8 67 G C - - MP 42 41 6 46 6 2 11 76 96 -8.951 -8.890 -0.024 -7.667 -7.946 -8.342 -3.947 -2.723 -4.005 0.701 -4.114 -4.354 0.338 -4.165 -3.760 3.368 -4.161 -0.408 -0.077 -3.935 -1.664 -2.894 ML 43 41 6 46 6 1 8 75 95 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 44 41 6 46 6 1 6 75 95 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 45 41 6 46 6 0 4 73 93 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 46 46 5 46 6 1 9 76 96 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 47 47 6 47 5 1 9 76 95 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 10 ] 9 66 u g - - MP 48 47 6 52 4 2 9 74 94 -6.495 -6.702 -0.073 -5.116 -3.342 -3.216 -3.208 0.371 -2.233 -3.762 2.028 -2.919 -3.243 0.716 -3.615 -1.235 1.304 -3.489 2.280 -2.154 ML 49 47 6 52 4 1 7 74 94 -3.758 -3.940 -0.507 -2.670 0.368 -0.385 -0.191 0.094 MR 50 47 6 52 4 1 5 74 94 -4.809 -3.838 -1.706 -0.766 0.368 -0.385 -0.191 0.094 D 51 47 6 52 4 0 3 73 93 -4.568 -4.250 -2.265 -0.520 IL 52 52 5 52 4 1 8 76 96 -1.686 -2.369 -1.117 -4.855 0.000 0.000 0.000 0.000 IR 53 53 6 53 3 1 8 75 95 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 11 ] 10 - G - - - ML 54 53 6 56 3 1 8 72 91 -7.970 -0.024 -6.288 -0.713 -1.772 1.406 -1.159 D 55 53 6 56 3 0 3 70 90 -5.620 -0.734 -1.403 IL 56 56 3 56 3 1 6 72 92 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 12 ] - 65 - A - - MR 57 56 3 59 5 1 8 71 90 -6.738 -0.050 -6.553 -6.766 -7.657 1.465 -1.563 -1.275 -1.038 D 58 56 3 59 5 0 1 69 89 -5.352 -0.707 -2.978 -4.409 -2.404 IR 59 59 3 59 5 1 5 71 91 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 13 ] 11 64 C G - - MP 60 59 3 64 6 2 9 70 89 -8.951 -8.890 -0.024 -7.667 -7.946 -8.342 -3.778 -3.593 -3.588 0.086 -2.506 -4.096 3.210 -3.231 -3.622 0.487 -3.954 -1.531 1.071 -3.891 -0.204 -2.492 ML 61 59 3 64 6 1 3 68 88 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 62 59 3 64 6 1 3 68 88 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 63 59 3 64 6 0 0 66 85 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 64 64 5 64 6 1 4 69 89 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 65 65 6 65 5 1 5 69 89 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 14 ] 12 63 C G - - MP 66 65 6 70 6 2 9 68 87 -8.951 -8.890 -0.024 -7.667 -7.946 -8.342 -3.778 -3.593 -3.588 0.086 -2.506 -4.096 3.210 -3.231 -3.622 0.487 -3.954 -1.531 1.071 -3.891 -0.204 -2.492 ML 67 65 6 70 6 1 3 66 86 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 68 65 6 70 6 1 3 66 86 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 69 65 6 70 6 0 0 64 83 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 70 70 5 70 6 1 4 67 87 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 71 71 6 71 5 1 4 67 87 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 15 ] 13 62 a u - - MP 72 71 6 76 6 2 8 66 85 -8.951 -8.890 -0.024 -7.667 -7.946 -8.342 -3.227 -2.418 -3.275 2.754 -3.330 -4.365 0.943 -3.340 -3.199 1.710 -3.715 -0.005 0.516 -3.646 -1.005 -2.150 ML 73 71 6 76 6 1 3 64 84 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 74 71 6 76 6 1 3 64 84 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 75 71 6 76 6 0 0 62 81 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 76 76 5 76 6 1 4 65 85 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 77 77 6 77 5 1 4 65 85 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 16 ] 14 61 u a - - MP 78 77 6 82 6 2 8 64 83 -8.951 -8.890 -0.024 -7.667 -7.946 -8.342 -3.470 -3.244 -3.378 0.398 -2.495 -4.002 1.811 -3.131 -3.394 0.812 -3.798 -1.156 2.806 -3.639 -0.189 -2.277 ML 79 77 6 82 6 1 2 62 82 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 80 77 6 82 6 1 2 62 82 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 81 77 6 82 6 0 0 60 79 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 82 82 5 82 6 1 3 63 83 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 83 83 6 83 5 1 4 63 83 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 17 ] 15 60 G C - - MP 84 83 6 88 6 2 6 62 81 -8.951 -8.890 -0.024 -7.667 -7.946 -8.342 -3.947 -2.723 -4.005 0.701 -4.114 -4.354 0.338 -4.165 -3.760 3.368 -4.161 -0.408 -0.077 -3.935 -1.664 -2.894 ML 85 83 6 88 6 1 2 60 80 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 86 83 6 88 6 1 2 60 80 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 87 83 6 88 6 0 0 58 78 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 88 88 5 88 6 1 3 61 81 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 89 89 6 89 5 1 3 61 81 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 18 ] 16 59 u a - - MP 90 89 6 94 6 2 5 60 79 -8.951 -8.890 -0.024 -7.667 -7.946 -8.342 -3.470 -3.244 -3.378 0.398 -2.495 -4.002 1.811 -3.131 -3.394 0.812 -3.798 -1.156 2.806 -3.639 -0.189 -2.277 ML 91 89 6 94 6 1 2 59 78 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 92 89 6 94 6 1 2 59 78 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 93 89 6 94 6 0 0 57 77 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 94 94 5 94 6 1 2 59 79 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 95 95 6 95 5 1 2 59 79 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 19 ] 17 58 u a - - MP 96 95 6 100 4 2 3 58 77 -6.495 -6.702 -0.073 -5.116 -3.470 -3.244 -3.378 0.398 -2.495 -4.002 1.811 -3.131 -3.394 0.812 -3.798 -1.156 2.806 -3.639 -0.189 -2.277 ML 97 95 6 100 4 1 1 58 78 -3.758 -3.940 -0.507 -2.670 0.368 -0.385 -0.191 0.094 MR 98 95 6 100 4 1 1 57 77 -4.809 -3.838 -1.706 -0.766 0.368 -0.385 -0.191 0.094 D 99 95 6 100 4 0 0 56 76 -4.568 -4.250 -2.265 -0.520 IL 100 100 5 100 4 1 2 59 79 -1.686 -2.369 -1.117 -4.855 0.000 0.000 0.000 0.000 IR 101 101 6 101 3 1 2 58 78 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 20 ] 18 - G - - - ML 102 101 6 104 5 1 3 55 74 -6.738 -0.050 -6.553 -6.766 -7.657 -0.713 -1.772 1.406 -1.159 D 103 101 6 104 5 0 0 54 73 -4.959 -0.803 -4.221 -2.596 -2.508 IL 104 104 3 104 5 1 1 55 75 -2.408 -0.496 -4.087 -5.920 -5.193 0.000 0.000 0.000 0.000 [ MATP 21 ] 19 57 C G - - MP 105 104 3 109 6 2 4 54 73 -8.951 -8.890 -0.024 -7.667 -7.946 -8.342 -3.778 -3.593 -3.588 0.086 -2.506 -4.096 3.210 -3.231 -3.622 0.487 -3.954 -1.531 1.071 -3.891 -0.204 -2.492 ML 106 104 3 109 6 1 1 53 72 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 107 104 3 109 6 1 1 53 72 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 108 104 3 109 6 0 0 50 70 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 109 109 5 109 6 1 1 54 73 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 110 110 6 110 5 1 1 53 73 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 22 ] 20 56 C G - - MP 111 110 6 115 6 2 4 52 71 -8.951 -8.890 -0.024 -7.667 -7.946 -8.342 -3.778 -3.593 -3.588 0.086 -2.506 -4.096 3.210 -3.231 -3.622 0.487 -3.954 -1.531 1.071 -3.891 -0.204 -2.492 ML 112 110 6 115 6 1 1 51 70 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 113 110 6 115 6 1 1 51 70 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 114 110 6 115 6 0 0 48 68 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 115 115 5 115 6 1 1 52 71 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 116 116 6 116 5 1 1 51 71 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 23 ] 21 55 u g - - MP 117 116 6 121 6 2 3 50 69 -8.951 -8.890 -0.024 -7.667 -7.946 -8.342 -3.342 -3.216 -3.208 0.371 -2.233 -3.762 2.028 -2.919 -3.243 0.716 -3.615 -1.235 1.304 -3.489 2.280 -2.154 ML 118 116 6 121 6 1 1 49 68 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 119 116 6 121 6 1 1 49 68 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 120 116 6 121 6 0 0 47 66 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 121 121 5 121 6 1 1 50 69 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 122 122 6 122 5 1 1 49 69 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 24 ] 22 54 G C - - MP 123 122 6 127 4 2 2 48 67 -6.454 -7.699 -0.108 -4.153 -3.947 -2.723 -4.005 0.701 -4.114 -4.354 0.338 -4.165 -3.760 3.368 -4.161 -0.408 -0.077 -3.935 -1.664 -2.894 ML 124 122 6 127 4 1 1 48 67 -2.408 -4.532 -1.293 -1.473 0.368 -0.385 -0.191 0.094 MR 125 122 6 127 4 1 1 47 66 -4.102 -12.528 -0.390 -2.485 0.368 -0.385 -0.191 0.094 D 126 122 6 127 4 0 0 45 65 -12.737 -14.007 -2.036 -0.404 IL 127 127 5 127 4 1 1 48 67 -2.817 -4.319 -0.613 -2.698 0.000 0.000 0.000 0.000 IR 128 128 6 128 3 1 1 48 67 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 25 ] - 53 - A - - MR 129 128 6 131 5 1 1 46 65 -6.738 -0.050 -6.553 -6.766 -7.657 1.465 -1.563 -1.275 -1.038 D 130 128 6 131 5 0 0 45 64 -5.352 -0.707 -2.978 -4.409 -2.404 IR 131 131 3 131 5 1 1 46 66 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 26 ] 23 52 C G - - MP 132 131 3 136 6 2 2 45 64 -8.951 -8.890 -0.024 -7.667 -7.946 -8.342 -3.778 -3.593 -3.588 0.086 -2.506 -4.096 3.210 -3.231 -3.622 0.487 -3.954 -1.531 1.071 -3.891 -0.204 -2.492 ML 133 131 3 136 6 1 1 44 63 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 134 131 3 136 6 1 1 43 63 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 135 131 3 136 6 0 0 41 60 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 136 136 5 136 6 1 1 45 64 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 137 137 6 137 5 1 1 44 64 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 27 ] 24 51 u a - - MP 138 137 6 142 6 2 2 43 62 -8.951 -8.890 -0.024 -7.667 -7.946 -8.342 -3.470 -3.244 -3.378 0.398 -2.495 -4.002 1.811 -3.131 -3.394 0.812 -3.798 -1.156 2.806 -3.639 -0.189 -2.277 ML 139 137 6 142 6 1 1 42 61 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 140 137 6 142 6 1 1 41 61 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 141 137 6 142 6 0 0 39 58 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 142 142 5 142 6 1 1 43 62 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 143 143 6 143 5 1 1 42 62 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 28 ] 25 50 C G - - MP 144 143 6 148 6 2 2 41 60 -8.951 -8.890 -0.024 -7.667 -7.946 -8.342 -3.778 -3.593 -3.588 0.086 -2.506 -4.096 3.210 -3.231 -3.622 0.487 -3.954 -1.531 1.071 -3.891 -0.204 -2.492 ML 145 143 6 148 6 1 1 40 59 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 146 143 6 148 6 1 1 40 59 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 147 143 6 148 6 0 0 37 57 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 148 148 5 148 6 1 1 41 60 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 149 149 6 149 5 1 1 40 60 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 29 ] 26 49 C G - - MP 150 149 6 154 6 2 2 39 58 -8.951 -8.890 -0.024 -7.667 -7.946 -8.342 -3.778 -3.593 -3.588 0.086 -2.506 -4.096 3.210 -3.231 -3.622 0.487 -3.954 -1.531 1.071 -3.891 -0.204 -2.492 ML 151 149 6 154 6 1 1 38 57 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 152 149 6 154 6 1 1 38 57 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 153 149 6 154 6 0 0 35 55 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 154 154 5 154 6 1 1 39 58 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 155 155 6 155 5 1 1 38 58 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 30 ] 27 48 u a - - MP 156 155 6 160 6 2 2 37 56 -8.951 -8.890 -0.024 -7.667 -7.946 -8.342 -3.470 -3.244 -3.378 0.398 -2.495 -4.002 1.811 -3.131 -3.394 0.812 -3.798 -1.156 2.806 -3.639 -0.189 -2.277 ML 157 155 6 160 6 1 1 36 56 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 158 155 6 160 6 1 1 36 55 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 159 155 6 160 6 0 0 34 54 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 160 160 5 160 6 1 1 37 56 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 161 161 6 161 5 1 1 37 56 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 31 ] 28 47 u a - - MP 162 161 6 166 4 2 2 35 54 -6.495 -6.702 -0.073 -5.116 -3.470 -3.244 -3.378 0.398 -2.495 -4.002 1.811 -3.131 -3.394 0.812 -3.798 -1.156 2.806 -3.639 -0.189 -2.277 ML 163 161 6 166 4 1 1 35 55 -3.758 -3.940 -0.507 -2.670 0.368 -0.385 -0.191 0.094 MR 164 161 6 166 4 1 1 35 54 -4.809 -3.838 -1.706 -0.766 0.368 -0.385 -0.191 0.094 D 165 161 6 166 4 0 0 34 53 -4.568 -4.250 -2.265 -0.520 IL 166 166 5 166 4 1 1 37 56 -1.686 -2.369 -1.117 -4.855 0.000 0.000 0.000 0.000 IR 167 167 6 167 3 1 1 36 55 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 32 ] 29 - A - - - ML 168 167 6 170 3 1 1 32 51 -7.970 -0.024 -6.288 1.465 -1.563 -1.275 -1.038 D 169 167 6 170 3 0 0 31 50 -5.620 -0.734 -1.403 IL 170 170 3 170 3 1 1 33 52 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 33 ] - 46 - C - - MR 171 170 3 173 5 1 1 31 50 -6.738 -0.050 -6.553 -6.766 -7.657 -0.809 1.231 -1.580 -0.420 D 172 170 3 173 5 0 0 30 49 -5.352 -0.707 -2.978 -4.409 -2.404 IR 173 173 3 173 5 1 1 32 51 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 34 ] 30 45 C G - - MP 174 173 3 178 6 2 2 30 49 -8.951 -8.890 -0.024 -7.667 -7.946 -8.342 -3.778 -3.593 -3.588 0.086 -2.506 -4.096 3.210 -3.231 -3.622 0.487 -3.954 -1.531 1.071 -3.891 -0.204 -2.492 ML 175 173 3 178 6 1 1 29 48 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 176 173 3 178 6 1 1 29 48 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 177 173 3 178 6 0 0 27 46 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 178 178 5 178 6 1 1 30 49 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 179 179 6 179 5 1 1 30 49 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 35 ] 31 44 u g - - MP 180 179 6 184 4 2 2 28 47 -6.454 -7.699 -0.108 -4.153 -3.342 -3.216 -3.208 0.371 -2.233 -3.762 2.028 -2.919 -3.243 0.716 -3.615 -1.235 1.304 -3.489 2.280 -2.154 ML 181 179 6 184 4 1 1 28 47 -2.408 -4.532 -1.293 -1.473 0.368 -0.385 -0.191 0.094 MR 182 179 6 184 4 1 1 27 46 -4.102 -12.528 -0.390 -2.485 0.368 -0.385 -0.191 0.094 D 183 179 6 184 4 0 0 26 45 -12.737 -14.007 -2.036 -0.404 IL 184 184 5 184 4 1 1 28 47 -2.817 -4.319 -0.613 -2.698 0.000 0.000 0.000 0.000 IR 185 185 6 185 3 1 1 28 47 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 36 ] - 43 - U - - MR 186 185 6 188 5 1 1 26 45 -6.738 -0.050 -6.553 -6.766 -7.657 -0.767 -0.902 -1.449 1.328 D 187 185 6 188 5 0 0 25 44 -5.352 -0.707 -2.978 -4.409 -2.404 IR 188 188 3 188 5 1 1 27 46 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 37 ] 32 42 G C - - MP 189 188 3 193 6 2 2 25 44 -8.951 -8.890 -0.024 -7.667 -7.946 -8.342 -3.947 -2.723 -4.005 0.701 -4.114 -4.354 0.338 -4.165 -3.760 3.368 -4.161 -0.408 -0.077 -3.935 -1.664 -2.894 ML 190 188 3 193 6 1 1 25 44 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 191 188 3 193 6 1 1 24 44 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 192 188 3 193 6 0 0 23 42 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 193 193 5 193 6 1 1 25 44 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 194 194 6 194 5 1 1 25 44 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 38 ] 33 41 u g - - MP 195 194 6 199 4 2 2 23 42 -6.495 -6.702 -0.073 -5.116 -3.342 -3.216 -3.208 0.371 -2.233 -3.762 2.028 -2.919 -3.243 0.716 -3.615 -1.235 1.304 -3.489 2.280 -2.154 ML 196 194 6 199 4 1 1 24 43 -3.758 -3.940 -0.507 -2.670 0.368 -0.385 -0.191 0.094 MR 197 194 6 199 4 1 1 23 42 -4.809 -3.838 -1.706 -0.766 0.368 -0.385 -0.191 0.094 D 198 194 6 199 4 0 0 22 42 -4.568 -4.250 -2.265 -0.520 IL 199 199 5 199 4 1 1 25 44 -1.686 -2.369 -1.117 -4.855 0.000 0.000 0.000 0.000 IR 200 200 6 200 3 1 1 24 43 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 39 ] 34 - A - - - ML 201 200 6 203 3 1 1 20 39 -7.549 -0.028 -6.203 1.465 -1.563 -1.275 -1.038 D 202 200 6 203 3 0 0 19 38 -6.174 -1.687 -0.566 IL 203 203 3 203 3 1 1 23 42 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 40 ] 35 - C - - - ML 204 203 3 206 3 1 1 19 38 -7.549 -0.028 -6.203 -0.809 1.231 -1.580 -0.420 D 205 203 3 206 3 0 0 18 37 -6.174 -1.687 -0.566 IL 206 206 3 206 3 1 1 22 41 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 41 ] 36 - A - - - ML 207 206 3 209 3 1 1 18 36 -7.549 -0.028 -6.203 1.465 -1.563 -1.275 -1.038 D 208 206 3 209 3 0 0 17 36 -6.174 -1.687 -0.566 IL 209 209 3 209 3 1 1 21 40 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 42 ] 37 - C - - - ML 210 209 3 212 3 1 1 17 35 -7.549 -0.028 -6.203 -0.809 1.231 -1.580 -0.420 D 211 209 3 212 3 0 0 16 35 -6.174 -1.687 -0.566 IL 212 212 3 212 3 1 1 20 38 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 43 ] 38 - G - - - ML 213 212 3 215 3 1 1 15 34 -7.549 -0.028 -6.203 -0.713 -1.772 1.406 -1.159 D 214 212 3 215 3 0 0 15 33 -6.174 -1.687 -0.566 IL 215 215 3 215 3 1 1 19 37 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 44 ] 39 - U - - - ML 216 215 3 218 3 1 1 13 32 -7.549 -0.028 -6.203 -0.767 -0.902 -1.449 1.328 D 217 215 3 218 3 0 0 13 32 -6.174 -1.687 -0.566 IL 218 218 3 218 3 1 1 18 36 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 45 ] 40 - G - - - ML 219 218 3 221 2 1 1 1 1 * 0.000 -0.713 -1.772 1.406 -1.159 D 220 218 3 221 2 0 0 0 0 * 0.000 IL 221 221 3 221 2 1 1 13 28 -1.823 -0.479 0.000 0.000 0.000 0.000 [ END 46 ] - - - - - - E 222 221 3 -1 0 0 0 0 0 // HMMER3/f [3.4 | Aug 2023] NAME mir-4428 ACC RF03907 DESC mir-4428 microRNA precursor family LENG 73 MAXL 164 ALPH RNA RF no MM no CONS yes CS yes MAP yes DATE Thu Jul 4 15:03:44 2024 COM [1] /hps/software/users/agb/rfam/bin/cmbuild -F CM SEED COM [2] /hps/software/users/agb/rfam/bin/cmcalibrate --cpu 8 /nfs/production/agb/rfam/15/rescan/families/RF03907/CM NSEQ 2 EFFN 1.738281 CKSUM 18142550 STATS LOCAL MSV -7.9622 0.71950 STATS LOCAL VITERBI -9.1069 0.71950 STATS LOCAL FORWARD -3.3214 0.71950 HMM A C G U m->m m->i m->d i->m i->i d->m d->d COMPO 1.58301 1.33906 1.17118 1.50259 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 0.00000 * 1 2.32144 2.33575 2.82483 0.29328 1 U - - : 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 2 2.64477 1.66936 2.35462 0.43745 2 U - - < 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 3 2.38772 2.91272 0.22751 2.85917 3 G - - < 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 4 2.38787 2.91288 0.22746 2.85939 4 G - - < 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 5 2.88788 0.33030 2.61997 1.87867 5 C - - < 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 6 0.21866 2.92615 2.68150 2.59903 6 A - - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 7 2.38632 2.91132 0.22791 2.85713 7 G - - < 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 8 2.38686 2.91186 0.22776 2.85792 8 G - - < 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 9 2.65385 1.43351 2.40348 0.50958 9 U - - < 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 10 2.37130 3.19920 0.21890 2.77351 10 G - - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 11 2.88183 0.33123 2.61743 1.87773 11 C - - < 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 12 2.88561 0.33065 2.61902 1.87832 12 C - - < 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 13 0.49509 2.41410 1.57707 2.35961 13 A - - < 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 14 2.64545 1.66936 2.35487 0.43734 14 U - - < 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 15 2.38690 2.91190 0.22774 2.85798 15 G - - < 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 16 2.64473 1.66936 2.35461 0.43746 16 U - - < 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 17 2.64431 1.66936 2.35445 0.43753 17 U - - < 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 18 2.37130 3.19920 0.21890 2.77351 18 G - - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 19 2.88456 0.33081 2.61858 1.87815 19 C - - < 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 20 2.88581 0.33062 2.61910 1.87835 20 C - - < 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 21 2.65352 1.43353 2.40335 0.50963 21 U - - < 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 22 2.38651 2.91151 0.22786 2.85741 22 G - - < 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 23 2.85934 0.33474 2.60791 1.87417 23 C - - < 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 24 2.63471 1.66931 2.35090 0.43913 24 U - - < 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 25 2.87856 0.33173 2.61606 1.87721 25 C - - < 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 26 2.88136 0.33130 2.61724 1.87765 26 C - - < 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 27 2.64225 1.66935 2.35369 0.43787 27 U - - < 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 28 2.64258 1.66935 2.35381 0.43781 28 U - - < 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 29 0.21866 2.92615 2.68150 2.59903 29 A - - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 30 2.88112 0.33134 2.61714 1.87762 30 C - - < 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 31 2.65293 1.43356 2.40311 0.50972 31 U - - < 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 32 2.37380 2.89874 0.23156 2.83899 32 G - - < 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 33 2.64434 1.43404 2.39969 0.51106 33 U - - < 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 34 0.21866 2.92615 2.68150 2.59903 34 A - - _ 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 35 2.46864 0.29669 3.03516 2.08783 35 C - - _ 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 36 0.21866 2.92615 2.68150 2.59903 36 A - - _ 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 37 2.46864 0.29669 3.03515 2.08783 37 C - - _ 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 38 2.37130 3.19920 0.21890 2.77350 38 G - - _ 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 39 2.32144 2.33575 2.82483 0.29328 39 U - - _ 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 40 2.37130 3.19920 0.21890 2.77351 40 G - - _ 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 41 1.93332 2.57540 0.37276 2.40376 41 G - - > 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 42 3.07442 0.26670 2.74247 2.09177 42 C - - > 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 43 2.32144 2.33575 2.82483 0.29328 43 U - - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 44 1.93481 2.57724 0.37193 2.40612 44 G - - > 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 45 2.15555 2.78933 0.28517 2.64777 45 G - - > 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 46 2.46864 0.29669 3.03516 2.08783 46 C - - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 47 0.49814 2.53165 1.50605 2.39659 47 A - - > 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 48 0.49810 2.53178 1.50605 2.39676 48 A - - > 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 49 2.15175 2.78483 0.28668 2.64189 49 G - - > 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 50 2.15198 2.78510 0.28659 2.64224 50 G - - > 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 51 0.49792 2.53232 1.50604 2.39751 51 A - - > 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 52 2.15257 2.78580 0.28635 2.64316 52 G - - > 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 53 0.21866 2.92615 2.68149 2.59903 53 A - - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 54 3.06864 0.26742 2.74014 2.09065 54 C - - > 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 55 1.93187 2.57362 0.37356 2.40146 55 G - - > 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 56 2.14879 2.78132 0.28786 2.63731 56 G - - > 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 57 2.14553 2.77747 0.28917 2.63229 57 G - - > 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 58 0.49793 2.53227 1.50604 2.39744 58 A - - > 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 59 0.49785 2.53253 1.50604 2.39780 59 A - - > 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 60 3.07450 0.26669 2.74250 2.09179 60 C - - > 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 61 0.49761 2.53323 1.50603 2.39876 61 A - - > 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 62 2.59271 1.83636 2.23000 0.41816 62 U - - > 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 63 2.15474 2.78836 0.28549 2.64651 63 G - - > 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 64 2.15565 2.78944 0.28513 2.64792 64 G - - > 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 65 0.21866 2.92615 2.68150 2.59903 65 A - - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 66 1.93213 2.57394 0.37342 2.40187 66 G - - > 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 67 3.06262 0.26819 2.73771 2.08947 67 C - - > 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 68 3.05298 0.26942 2.73380 2.08758 68 C - - > 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 69 2.15370 2.78714 0.28590 2.64491 69 G - - > 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 70 3.07939 0.26608 2.74446 2.09274 70 C - - > 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 71 3.08216 0.26573 2.74557 2.09327 71 C - - > 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 72 0.49688 2.53545 1.50602 2.40181 72 A - - > 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 73 2.32144 2.33575 2.82483 0.29328 73 U - - : 1.38629 1.38629 1.38629 1.38629 0.02469 3.71357 * 1.46634 0.26236 0.00000 * //