INFERNAL1/a [1.1.5 | Sep 2023] NAME mir-2040 ACC RF03870 DESC mir-2040 microRNA precursor family STATES 247 NODES 51 CLEN 81 W 98 ALPH RNA RF no CONS yes MAP yes DATE Sat Jul 13 18:09:21 2024 COM [1] /hps/software/users/agb/rfam/bin/cmbuild -F CM SEED COM [2] /hps/software/users/agb/rfam/bin/cmcalibrate --cpu 8 /nfs/production/agb/rfam/15/rescan/families/RF03870/CM PBEGIN 0.05 PEND 0.05 WBETA 1e-07 QDBBETA1 1e-07 QDBBETA2 1e-15 N2OMEGA 1.52588e-05 N3OMEGA 1.52588e-05 ELSELF -0.08926734 NSEQ 2 EFFN 0.902344 CKSUM 1702778934 NULL 0.000 0.000 0.000 0.000 GA 51.00 TC 51.00 NC 50.30 EFP7GF -5.9704 0.71899 ECMLC 0.62653 -5.25331 3.65551 1600000 318599 0.003766 ECMGC 0.42953 -15.34368 -2.29102 1600000 108879 0.003674 ECMLI 0.60515 -3.58932 5.27293 1600000 256046 0.004687 ECMGI 0.46423 -9.42086 1.57744 1600000 65985 0.006062 CM [ ROOT 0 ] - - - - - - S 0 -1 0 1 6 1 1 98 118 -8.937 -8.877 -0.024 -7.653 -7.933 -8.328 IL 1 1 2 1 6 1 24 100 120 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 2 2 3 2 5 1 24 99 119 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 1 ] 1 81 G C - - MP 3 2 3 7 6 2 26 98 118 -8.937 -8.877 -0.024 -7.653 -7.933 -8.328 -3.874 -2.690 -3.931 0.745 -4.012 -4.319 0.426 -4.081 -3.703 3.331 -4.110 -0.375 0.008 -3.885 -1.574 -2.821 ML 4 2 3 7 6 1 21 96 117 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 5 2 3 7 6 1 20 96 116 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 6 2 3 7 6 0 15 94 114 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 7 7 5 7 6 1 23 98 118 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 8 8 6 8 5 1 23 97 117 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 2 ] 2 80 a u - - MP 9 8 6 13 6 2 24 96 116 -8.937 -8.877 -0.024 -7.653 -7.933 -8.328 -3.190 -2.393 -3.239 2.687 -3.271 -4.307 1.002 -3.303 -3.164 1.757 -3.678 0.012 0.572 -3.597 -0.948 -2.117 ML 10 8 6 13 6 1 20 94 115 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 11 8 6 13 6 1 19 94 114 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 12 8 6 13 6 0 14 92 112 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 13 13 5 13 6 1 22 96 116 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 14 14 6 14 5 1 22 95 115 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 3 ] 3 79 u g - - MP 15 14 6 19 6 2 23 94 114 -8.937 -8.877 -0.024 -7.653 -7.933 -8.328 -3.288 -3.155 -3.165 0.427 -2.212 -3.727 2.047 -2.891 -3.200 0.788 -3.576 -1.173 1.335 -3.438 2.190 -2.113 ML 16 14 6 19 6 1 19 92 113 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 17 14 6 19 6 1 18 92 112 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 18 14 6 19 6 0 14 90 110 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 19 19 5 19 6 1 20 94 114 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 20 20 6 20 5 1 21 93 113 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 4 ] 4 78 g c - - MP 21 20 6 25 6 2 21 92 112 -8.937 -8.877 -0.024 -7.653 -7.933 -8.328 -2.950 0.256 -3.053 1.174 -3.255 -3.777 0.814 -3.333 -3.035 2.764 -3.497 -0.030 0.525 -3.130 -1.029 -2.061 ML 22 20 6 25 6 1 18 91 111 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 23 20 6 25 6 1 17 90 111 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 24 20 6 25 6 0 13 88 108 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 25 25 5 25 6 1 19 92 112 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 26 26 6 26 5 1 19 91 111 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 5 ] 5 77 C G - - MP 27 26 6 31 6 2 19 90 110 -8.937 -8.877 -0.024 -7.653 -7.933 -8.328 -3.716 -3.520 -3.534 0.152 -2.472 -4.049 3.168 -3.189 -3.567 0.572 -3.905 -1.455 1.109 -3.831 -0.170 -2.440 ML 28 26 6 31 6 1 16 89 109 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 29 26 6 31 6 1 15 89 109 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 30 26 6 31 6 0 13 87 107 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 31 31 5 31 6 1 17 90 110 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 32 32 6 32 5 1 17 89 109 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 6 ] 6 76 C G - - MP 33 32 6 37 4 2 17 88 108 -6.450 -6.657 -0.076 -5.071 -3.716 -3.520 -3.534 0.152 -2.472 -4.049 3.168 -3.189 -3.567 0.572 -3.905 -1.455 1.109 -3.831 -0.170 -2.440 ML 34 32 6 37 4 1 15 88 108 -3.758 -3.940 -0.507 -2.670 0.368 -0.385 -0.191 0.094 MR 35 32 6 37 4 1 14 87 108 -4.809 -3.838 -1.706 -0.766 0.368 -0.385 -0.191 0.094 D 36 32 6 37 4 0 12 86 107 -4.568 -4.250 -2.265 -0.520 IL 37 37 5 37 4 1 16 89 110 -1.686 -2.369 -1.117 -4.855 0.000 0.000 0.000 0.000 IR 38 38 6 38 3 1 16 88 109 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 7 ] 7 - U - - - ML 39 38 6 41 3 1 15 86 105 -7.934 -0.025 -6.251 -0.703 -0.852 -1.379 1.291 D 40 38 6 41 3 0 11 84 104 -5.620 -0.734 -1.403 IL 41 41 3 41 3 1 15 86 106 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 8 ] - 75 - U - - MR 42 41 3 44 3 1 14 84 104 -7.934 -0.025 -6.251 -0.703 -0.852 -1.379 1.291 D 43 41 3 44 3 0 9 83 103 -6.390 -1.568 -0.620 IR 44 44 3 44 3 1 14 85 105 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 9 ] - 74 - C - - MR 45 44 3 47 3 1 13 83 103 -7.934 -0.025 -6.251 -0.730 1.178 -1.495 -0.359 D 46 44 3 47 3 0 8 82 102 -6.390 -1.568 -0.620 IR 47 47 3 47 3 1 13 84 104 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 10 ] - 73 - C - - MR 48 47 3 50 5 1 12 82 102 -6.704 -0.051 -6.520 -6.732 -7.624 -0.730 1.178 -1.495 -0.359 D 49 47 3 50 5 0 7 81 101 -5.352 -0.707 -2.978 -4.409 -2.404 IR 50 50 3 50 5 1 11 83 103 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 11 ] 8 72 a u - - MP 51 50 3 55 6 2 12 81 101 -8.937 -8.877 -0.024 -7.653 -7.933 -8.328 -3.190 -2.393 -3.239 2.687 -3.271 -4.307 1.002 -3.303 -3.164 1.757 -3.678 0.012 0.572 -3.597 -0.948 -2.117 ML 52 50 3 55 6 1 8 81 101 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 53 50 3 55 6 1 7 80 100 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 54 50 3 55 6 0 4 79 99 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 55 55 5 55 6 1 10 81 101 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 56 56 6 56 5 1 10 81 101 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 12 ] 9 71 C G - - MP 57 56 6 61 4 2 10 79 99 -6.450 -6.657 -0.076 -5.071 -3.716 -3.520 -3.534 0.152 -2.472 -4.049 3.168 -3.189 -3.567 0.572 -3.905 -1.455 1.109 -3.831 -0.170 -2.440 ML 58 56 6 61 4 1 7 80 100 -3.758 -3.940 -0.507 -2.670 0.368 -0.385 -0.191 0.094 MR 59 56 6 61 4 1 5 79 99 -4.809 -3.838 -1.706 -0.766 0.368 -0.385 -0.191 0.094 D 60 56 6 61 4 0 4 78 98 -4.568 -4.250 -2.265 -0.520 IL 61 61 5 61 4 1 9 81 101 -1.686 -2.369 -1.117 -4.855 0.000 0.000 0.000 0.000 IR 62 62 6 62 3 1 9 80 100 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 13 ] 10 - a - - - ML 63 62 6 65 3 1 9 77 97 -7.934 -0.025 -6.251 0.523 0.086 -0.833 -0.089 D 64 62 6 65 3 0 3 76 96 -5.620 -0.734 -1.403 IL 65 65 3 65 3 1 7 78 98 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 14 ] - 70 - a - - MR 66 65 3 68 5 1 9 76 96 -6.704 -0.051 -6.520 -6.732 -7.624 0.609 -1.035 0.321 -0.439 D 67 65 3 68 5 0 1 75 94 -5.352 -0.707 -2.978 -4.409 -2.404 IR 68 68 3 68 5 1 5 76 96 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 15 ] 11 69 a u - - MP 69 68 3 73 6 2 10 75 95 -8.937 -8.877 -0.024 -7.653 -7.933 -8.328 -3.190 -2.393 -3.239 2.687 -3.271 -4.307 1.002 -3.303 -3.164 1.757 -3.678 0.012 0.572 -3.597 -0.948 -2.117 ML 70 68 3 73 6 1 3 74 93 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 71 68 3 73 6 1 3 73 93 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 72 68 3 73 6 0 0 71 91 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 73 73 5 73 6 1 5 75 94 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 74 74 6 74 5 1 5 74 94 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 16 ] 12 68 C G - - MP 75 74 6 79 6 2 9 73 93 -8.937 -8.877 -0.024 -7.653 -7.933 -8.328 -3.716 -3.520 -3.534 0.152 -2.472 -4.049 3.168 -3.189 -3.567 0.572 -3.905 -1.455 1.109 -3.831 -0.170 -2.440 ML 76 74 6 79 6 1 3 72 91 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 77 74 6 79 6 1 3 71 91 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 78 74 6 79 6 0 0 69 89 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 79 79 5 79 6 1 4 73 92 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 80 80 6 80 5 1 5 72 92 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 17 ] 13 67 C G - - MP 81 80 6 85 6 2 9 71 91 -8.937 -8.877 -0.024 -7.653 -7.933 -8.328 -3.716 -3.520 -3.534 0.152 -2.472 -4.049 3.168 -3.189 -3.567 0.572 -3.905 -1.455 1.109 -3.831 -0.170 -2.440 ML 82 80 6 85 6 1 3 70 89 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 83 80 6 85 6 1 3 69 89 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 84 80 6 85 6 0 0 67 87 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 85 85 5 85 6 1 4 71 90 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 86 86 6 86 5 1 4 70 90 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 18 ] 14 66 u a - - MP 87 86 6 91 6 2 8 69 89 -8.937 -8.877 -0.024 -7.653 -7.933 -8.328 -3.421 -3.186 -3.333 0.451 -2.463 -3.959 1.840 -3.094 -3.350 0.883 -3.755 -1.097 2.747 -3.589 -0.159 -2.236 ML 88 86 6 91 6 1 3 68 87 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 89 86 6 91 6 1 2 67 87 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 90 86 6 91 6 0 0 65 85 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 91 91 5 91 6 1 4 69 88 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 92 92 6 92 5 1 4 68 88 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 19 ] 15 65 u a - - MP 93 92 6 97 6 2 8 67 87 -8.937 -8.877 -0.024 -7.653 -7.933 -8.328 -3.421 -3.186 -3.333 0.451 -2.463 -3.959 1.840 -3.094 -3.350 0.883 -3.755 -1.097 2.747 -3.589 -0.159 -2.236 ML 94 92 6 97 6 1 2 66 85 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 95 92 6 97 6 1 2 65 85 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 96 92 6 97 6 0 0 63 83 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 97 97 5 97 6 1 3 67 86 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 98 98 6 98 5 1 3 66 86 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 20 ] 16 64 C G - - MP 99 98 6 103 6 2 7 65 85 -8.937 -8.877 -0.024 -7.653 -7.933 -8.328 -3.716 -3.520 -3.534 0.152 -2.472 -4.049 3.168 -3.189 -3.567 0.572 -3.905 -1.455 1.109 -3.831 -0.170 -2.440 ML 100 98 6 103 6 1 2 64 83 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 101 98 6 103 6 1 2 63 83 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 102 98 6 103 6 0 0 61 81 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 103 103 5 103 6 1 3 65 84 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 104 104 6 104 5 1 3 64 84 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 21 ] 17 63 a u - - MP 105 104 6 109 6 2 6 63 83 -8.937 -8.877 -0.024 -7.653 -7.933 -8.328 -2.959 -2.136 -3.062 2.069 -3.336 -4.120 0.882 -3.239 -2.985 2.018 -3.503 1.390 0.577 -3.345 -1.029 -1.957 ML 106 104 6 109 6 1 2 62 81 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 107 104 6 109 6 1 2 62 81 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 108 104 6 109 6 0 0 59 79 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 109 109 5 109 6 1 3 63 82 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 110 110 6 110 5 1 3 62 82 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 22 ] 18 62 G C - - MP 111 110 6 115 6 2 5 61 81 -8.937 -8.877 -0.024 -7.653 -7.933 -8.328 -3.874 -2.690 -3.931 0.745 -4.012 -4.319 0.426 -4.081 -3.703 3.331 -4.110 -0.375 0.008 -3.885 -1.574 -2.821 ML 112 110 6 115 6 1 2 60 80 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 113 110 6 115 6 1 2 60 80 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 114 110 6 115 6 0 0 58 78 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 115 115 5 115 6 1 2 61 81 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 116 116 6 116 5 1 2 60 80 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 23 ] 19 61 G C - - MP 117 116 6 121 4 2 3 59 79 -6.450 -6.657 -0.076 -5.071 -3.874 -2.690 -3.931 0.745 -4.012 -4.319 0.426 -4.081 -3.703 3.331 -4.110 -0.375 0.008 -3.885 -1.574 -2.821 ML 118 116 6 121 4 1 1 59 79 -3.758 -3.940 -0.507 -2.670 0.368 -0.385 -0.191 0.094 MR 119 116 6 121 4 1 1 59 79 -4.809 -3.838 -1.706 -0.766 0.368 -0.385 -0.191 0.094 D 120 116 6 121 4 0 0 58 78 -4.568 -4.250 -2.265 -0.520 IL 121 121 5 121 4 1 2 61 80 -1.686 -2.369 -1.117 -4.855 0.000 0.000 0.000 0.000 IR 122 122 6 122 3 1 1 60 79 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 24 ] 20 - U - - - ML 123 122 6 125 3 1 2 57 76 -7.934 -0.025 -6.251 -0.703 -0.852 -1.379 1.291 D 124 122 6 125 3 0 0 55 75 -5.620 -0.734 -1.403 IL 125 125 3 125 3 1 1 57 77 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 25 ] - 60 - C - - MR 126 125 3 128 5 1 1 56 75 -6.704 -0.051 -6.520 -6.732 -7.624 -0.730 1.178 -1.495 -0.359 D 127 125 3 128 5 0 0 54 74 -5.352 -0.707 -2.978 -4.409 -2.404 IR 128 128 3 128 5 1 1 56 75 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 26 ] 21 59 C G - - MP 129 128 3 133 6 2 3 55 74 -8.937 -8.877 -0.024 -7.653 -7.933 -8.328 -3.716 -3.520 -3.534 0.152 -2.472 -4.049 3.168 -3.189 -3.567 0.572 -3.905 -1.455 1.109 -3.831 -0.170 -2.440 ML 130 128 3 133 6 1 1 53 73 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 131 128 3 133 6 1 1 53 73 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 132 128 3 133 6 0 0 51 70 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 133 133 5 133 6 1 1 54 74 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 134 134 6 134 5 1 1 54 73 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 27 ] 22 58 a u - - MP 135 134 6 139 6 2 2 53 72 -8.937 -8.877 -0.024 -7.653 -7.933 -8.328 -3.190 -2.393 -3.239 2.687 -3.271 -4.307 1.002 -3.303 -3.164 1.757 -3.678 0.012 0.572 -3.597 -0.948 -2.117 ML 136 134 6 139 6 1 1 52 71 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 137 134 6 139 6 1 1 51 71 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 138 134 6 139 6 0 0 50 69 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 139 139 5 139 6 1 1 52 72 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 140 140 6 140 5 1 1 52 71 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 28 ] 23 57 G C - - MP 141 140 6 145 4 2 2 51 70 -6.450 -6.657 -0.076 -5.071 -3.874 -2.690 -3.931 0.745 -4.012 -4.319 0.426 -4.081 -3.703 3.331 -4.110 -0.375 0.008 -3.885 -1.574 -2.821 ML 142 140 6 145 4 1 1 51 70 -3.758 -3.940 -0.507 -2.670 0.368 -0.385 -0.191 0.094 MR 143 140 6 145 4 1 1 50 70 -4.809 -3.838 -1.706 -0.766 0.368 -0.385 -0.191 0.094 D 144 140 6 145 4 0 0 49 69 -4.568 -4.250 -2.265 -0.520 IL 145 145 5 145 4 1 1 52 72 -1.686 -2.369 -1.117 -4.855 0.000 0.000 0.000 0.000 IR 146 146 6 146 3 1 1 51 71 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 29 ] 24 - C - - - ML 147 146 6 149 3 1 1 48 67 -7.934 -0.025 -6.251 -0.730 1.178 -1.495 -0.359 D 148 146 6 149 3 0 0 47 66 -5.620 -0.734 -1.403 IL 149 149 3 149 3 1 1 49 68 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 30 ] - 56 - A - - MR 150 149 3 152 5 1 1 47 66 -6.704 -0.051 -6.520 -6.732 -7.624 1.431 -1.490 -1.208 -0.959 D 151 149 3 152 5 0 0 46 65 -5.352 -0.707 -2.978 -4.409 -2.404 IR 152 152 3 152 5 1 1 47 67 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 31 ] 25 55 u a - - MP 153 152 3 157 6 2 2 46 65 -8.937 -8.877 -0.024 -7.653 -7.933 -8.328 -3.421 -3.186 -3.333 0.451 -2.463 -3.959 1.840 -3.094 -3.350 0.883 -3.755 -1.097 2.747 -3.589 -0.159 -2.236 ML 154 152 3 157 6 1 1 44 64 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 155 152 3 157 6 1 1 44 64 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 156 152 3 157 6 0 0 42 61 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 157 157 5 157 6 1 1 46 65 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 158 158 6 158 5 1 1 45 65 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 32 ] 26 54 a u - - MP 159 158 6 163 6 2 2 44 63 -8.937 -8.877 -0.024 -7.653 -7.933 -8.328 -3.190 -2.393 -3.239 2.687 -3.271 -4.307 1.002 -3.303 -3.164 1.757 -3.678 0.012 0.572 -3.597 -0.948 -2.117 ML 160 158 6 163 6 1 1 42 62 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 161 158 6 163 6 1 1 42 62 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 162 158 6 163 6 0 0 40 59 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 163 163 5 163 6 1 1 44 63 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 164 164 6 164 5 1 1 43 63 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 33 ] 27 53 C G - - MP 165 164 6 169 6 2 2 42 61 -8.937 -8.877 -0.024 -7.653 -7.933 -8.328 -3.716 -3.520 -3.534 0.152 -2.472 -4.049 3.168 -3.189 -3.567 0.572 -3.905 -1.455 1.109 -3.831 -0.170 -2.440 ML 166 164 6 169 6 1 1 41 60 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 167 164 6 169 6 1 1 41 60 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 168 164 6 169 6 0 0 38 58 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 169 169 5 169 6 1 1 42 61 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 170 170 6 170 5 1 1 41 61 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 34 ] 28 52 G C - - MP 171 170 6 175 6 2 2 40 59 -8.937 -8.877 -0.024 -7.653 -7.933 -8.328 -3.874 -2.690 -3.931 0.745 -4.012 -4.319 0.426 -4.081 -3.703 3.331 -4.110 -0.375 0.008 -3.885 -1.574 -2.821 ML 172 170 6 175 6 1 1 39 58 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 173 170 6 175 6 1 1 39 58 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 174 170 6 175 6 0 0 37 57 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 175 175 5 175 6 1 1 40 59 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 176 176 6 176 5 1 1 39 59 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 35 ] 29 51 a u - - MP 177 176 6 181 4 2 2 38 57 -6.450 -6.657 -0.076 -5.071 -3.190 -2.393 -3.239 2.687 -3.271 -4.307 1.002 -3.303 -3.164 1.757 -3.678 0.012 0.572 -3.597 -0.948 -2.117 ML 178 176 6 181 4 1 1 38 58 -3.758 -3.940 -0.507 -2.670 0.368 -0.385 -0.191 0.094 MR 179 176 6 181 4 1 1 38 57 -4.809 -3.838 -1.706 -0.766 0.368 -0.385 -0.191 0.094 D 180 176 6 181 4 0 0 37 56 -4.568 -4.250 -2.265 -0.520 IL 181 181 5 181 4 1 1 40 59 -1.686 -2.369 -1.117 -4.855 0.000 0.000 0.000 0.000 IR 182 182 6 182 3 1 1 39 58 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 36 ] 30 - C - - - ML 183 182 6 185 3 1 1 35 54 -7.934 -0.025 -6.251 -0.730 1.178 -1.495 -0.359 D 184 182 6 185 3 0 0 34 53 -5.620 -0.734 -1.403 IL 185 185 3 185 3 1 1 36 55 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 37 ] - 50 - C - - MR 186 185 3 188 5 1 1 34 53 -6.704 -0.051 -6.520 -6.732 -7.624 -0.730 1.178 -1.495 -0.359 D 187 185 3 188 5 0 0 33 52 -5.352 -0.707 -2.978 -4.409 -2.404 IR 188 188 3 188 5 1 1 35 53 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 38 ] 31 49 a u - - MP 189 188 3 193 6 2 2 33 52 -8.937 -8.877 -0.024 -7.653 -7.933 -8.328 -3.190 -2.393 -3.239 2.687 -3.271 -4.307 1.002 -3.303 -3.164 1.757 -3.678 0.012 0.572 -3.597 -0.948 -2.117 ML 190 188 3 193 6 1 1 32 51 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 191 188 3 193 6 1 1 32 50 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 192 188 3 193 6 0 0 29 48 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 193 193 5 193 6 1 1 33 52 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 194 194 6 194 5 1 1 33 51 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 39 ] 32 48 c g - - MP 195 194 6 199 6 2 2 31 50 -8.937 -8.877 -0.024 -7.653 -7.933 -8.328 -3.221 -3.131 -3.129 0.468 -2.197 -3.708 2.546 -2.875 -3.164 0.813 -3.557 -1.188 1.413 -3.367 1.389 -2.073 ML 196 194 6 199 6 1 1 30 49 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 197 194 6 199 6 1 1 30 48 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 198 194 6 199 6 0 0 27 46 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 199 199 5 199 6 1 1 31 50 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 200 200 6 200 5 1 1 31 49 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 40 ] 33 47 g c - - MP 201 200 6 205 6 2 2 29 48 -8.937 -8.877 -0.024 -7.653 -7.933 -8.328 -3.258 -2.304 -3.335 1.204 -3.627 -4.138 0.698 -3.558 -3.259 2.812 -3.726 1.146 0.383 -3.468 -1.247 -2.241 ML 202 200 6 205 6 1 1 28 47 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 203 200 6 205 6 1 1 28 46 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 204 200 6 205 6 0 0 25 44 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 205 205 5 205 6 1 1 29 48 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 206 206 6 206 5 1 1 29 47 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 41 ] 34 46 a u - - MP 207 206 6 211 6 2 2 27 46 -8.937 -8.877 -0.024 -7.653 -7.933 -8.328 -3.190 -2.393 -3.239 2.687 -3.271 -4.307 1.002 -3.303 -3.164 1.757 -3.678 0.012 0.572 -3.597 -0.948 -2.117 ML 208 206 6 211 6 1 1 26 45 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 209 206 6 211 6 1 1 26 44 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 210 206 6 211 6 0 0 23 42 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 211 211 5 211 6 1 1 27 46 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 212 212 6 212 5 1 1 27 45 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 42 ] 35 45 g u - - MP 213 212 6 217 6 2 2 25 44 -8.937 -8.877 -0.024 -7.653 -7.933 -8.328 -3.113 -2.137 -3.229 1.383 -3.525 -4.307 0.762 -3.330 -3.056 2.025 -3.558 2.217 0.399 -3.589 -1.173 -2.059 ML 214 212 6 217 6 1 1 24 43 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 215 212 6 217 6 1 1 24 43 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 216 212 6 217 6 0 0 22 41 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 217 217 5 217 6 1 1 25 44 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 218 218 6 218 5 1 1 25 43 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 43 ] 36 44 C G - - MP 219 218 6 223 6 2 2 23 42 -8.937 -8.877 -0.024 -7.653 -7.933 -8.328 -3.716 -3.520 -3.534 0.152 -2.472 -4.049 3.168 -3.189 -3.567 0.572 -3.905 -1.455 1.109 -3.831 -0.170 -2.440 ML 220 218 6 223 6 1 1 23 41 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 221 218 6 223 6 1 1 22 41 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 222 218 6 223 6 0 0 21 40 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 223 223 5 223 6 1 1 23 42 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 224 224 6 224 5 1 1 23 42 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 44 ] 37 43 G C - - MP 225 224 6 229 4 2 2 21 40 -6.450 -6.657 -0.076 -5.071 -3.874 -2.690 -3.931 0.745 -4.012 -4.319 0.426 -4.081 -3.703 3.331 -4.110 -0.375 0.008 -3.885 -1.574 -2.821 ML 226 224 6 229 4 1 1 22 41 -3.758 -3.940 -0.507 -2.670 0.368 -0.385 -0.191 0.094 MR 227 224 6 229 4 1 1 21 40 -4.809 -3.838 -1.706 -0.766 0.368 -0.385 -0.191 0.094 D 228 224 6 229 4 0 0 20 39 -4.568 -4.250 -2.265 -0.520 IL 229 229 5 229 4 1 1 23 42 -1.686 -2.369 -1.117 -4.855 0.000 0.000 0.000 0.000 IR 230 230 6 230 3 1 1 22 41 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 45 ] 38 - C - - - ML 231 230 6 233 3 1 1 18 37 -7.509 -0.028 -6.163 -0.730 1.178 -1.495 -0.359 D 232 230 6 233 3 0 0 17 36 -6.174 -1.687 -0.566 IL 233 233 3 233 3 1 1 21 40 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 46 ] 39 - U - - - ML 234 233 3 236 3 1 1 17 35 -7.509 -0.028 -6.163 -0.703 -0.852 -1.379 1.291 D 235 233 3 236 3 0 0 16 35 -6.174 -1.687 -0.566 IL 236 236 3 236 3 1 1 20 39 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 47 ] 40 - C - - - ML 237 236 3 239 3 1 1 15 34 -7.509 -0.028 -6.163 -0.730 1.178 -1.495 -0.359 D 238 236 3 239 3 0 0 15 33 -6.174 -1.687 -0.566 IL 239 239 3 239 3 1 1 19 37 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 48 ] 41 - C - - - ML 240 239 3 242 3 1 1 13 32 -7.509 -0.028 -6.163 -0.730 1.178 -1.495 -0.359 D 241 239 3 242 3 0 0 13 32 -6.174 -1.687 -0.566 IL 242 242 3 242 3 1 1 18 36 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 49 ] 42 - U - - - ML 243 242 3 245 2 1 1 1 1 * 0.000 -0.703 -0.852 -1.379 1.291 D 244 242 3 245 2 0 0 0 0 * 0.000 IL 245 245 3 245 2 1 1 13 28 -1.823 -0.479 0.000 0.000 0.000 0.000 [ END 50 ] - - - - - - E 246 245 3 -1 0 0 0 0 0 // HMMER3/f [3.4 | Aug 2023] NAME mir-2040 ACC RF03870 DESC mir-2040 microRNA precursor family LENG 81 MAXL 175 ALPH RNA RF no MM no CONS yes CS yes MAP yes DATE Sat Jul 13 18:09:21 2024 COM [1] /hps/software/users/agb/rfam/bin/cmbuild -F CM SEED COM [2] /hps/software/users/agb/rfam/bin/cmcalibrate --cpu 8 /nfs/production/agb/rfam/15/rescan/families/RF03870/CM NSEQ 2 EFFN 1.792969 CKSUM 1702778934 STATS LOCAL MSV -8.2612 0.71899 STATS LOCAL VITERBI -9.5958 0.71899 STATS LOCAL FORWARD -3.3689 0.71899 HMM A C G U m->m m->i m->d i->m i->i d->m d->d COMPO 1.68834 1.19088 1.32893 1.40055 1.38629 1.38629 1.38629 1.38629 0.04884 3.73674 3.73674 1.46634 0.26236 0.00000 * 1 2.42286 2.96177 0.21643 2.91478 1 G - - < 1.38629 1.38629 1.38629 1.38629 0.04884 3.73674 3.73674 1.46634 0.26236 1.09861 0.40547 2 0.47628 2.45117 1.60028 2.39821 2 A - - < 1.38629 1.38629 1.38629 1.38629 0.04884 3.73674 3.73674 1.46634 0.26236 1.09861 0.40547 3 2.69069 1.44587 2.43884 0.49534 3 U - - < 1.38629 1.38629 1.38629 1.38629 0.04884 3.73674 3.73674 1.46634 0.26236 1.09861 0.40547 4 1.34103 2.41117 0.60448 2.27933 4 G - - < 1.38629 1.38629 1.38629 1.38629 0.04884 3.73674 3.73674 1.46634 0.26236 1.09861 0.40547 5 2.92042 0.31988 2.65487 1.90014 5 C - - < 1.38629 1.38629 1.38629 1.38629 0.04884 3.73674 3.73674 1.46634 0.26236 1.09861 0.40547 6 2.91838 0.32019 2.65400 1.89982 6 C - - < 1.38629 1.38629 1.38629 1.38629 0.04884 3.73674 3.73674 1.46634 0.26236 1.09861 0.40547 7 2.34885 2.35825 2.85379 0.28461 7 U - - - 1.38629 1.38629 1.38629 1.38629 0.04884 3.73674 3.73674 1.46634 0.26236 1.09861 0.40547 8 0.47871 2.44502 1.59985 2.38848 8 A - - < 1.38629 1.38629 1.38629 1.38629 0.04884 3.73674 3.73674 1.46634 0.26236 1.09861 0.40547 9 2.91416 0.32081 2.65220 1.89915 9 C - - < 1.38629 1.38629 1.38629 1.38629 0.04884 3.73674 3.73674 1.46634 0.26236 1.09861 0.40547 10 0.96210 1.22090 2.13258 1.58760 10 a - - - 1.38629 1.38629 1.38629 1.38629 0.04884 3.73674 3.73674 1.46634 0.26236 1.09861 0.40547 11 0.47854 2.44545 1.59988 2.38916 11 A - - < 1.38629 1.38629 1.38629 1.38629 0.04884 3.73674 3.73674 1.46634 0.26236 1.09861 0.40547 12 2.91519 0.32066 2.65265 1.89932 12 C - - < 1.38629 1.38629 1.38629 1.38629 0.04884 3.73674 3.73674 1.46634 0.26236 1.09861 0.40547 13 2.91616 0.32052 2.65306 1.89947 13 C - - < 1.38629 1.38629 1.38629 1.38629 0.04884 3.73674 3.73674 1.46634 0.26236 1.09861 0.40547 14 2.67452 1.68955 2.38801 0.42366 14 U - - < 1.38629 1.38629 1.38629 1.38629 0.04884 3.73674 3.73674 1.46634 0.26236 1.09861 0.40547 15 2.67414 1.68954 2.38787 0.42372 15 U - - < 1.38629 1.38629 1.38629 1.38629 0.04884 3.73674 3.73674 1.46634 0.26236 1.09861 0.40547 16 2.91494 0.32070 2.65254 1.89927 16 C - - < 1.38629 1.38629 1.38629 1.38629 0.04884 3.73674 3.73674 1.46634 0.26236 1.09861 0.40547 17 1.04325 2.41019 0.79056 2.26044 17 g - - < 1.38629 1.38629 1.38629 1.38629 0.04884 3.73674 3.73674 1.46634 0.26236 1.09861 0.40547 18 2.40494 2.94342 0.22143 2.88826 18 G - - < 1.38629 1.38629 1.38629 1.38629 0.04884 3.73674 3.73674 1.46634 0.26236 1.09861 0.40547 19 2.40469 2.94317 0.22150 2.88789 19 G - - < 1.38629 1.38629 1.38629 1.38629 0.04884 3.73674 3.73674 1.46634 0.26236 1.09861 0.40547 20 2.34885 2.35825 2.85379 0.28461 20 U - - - 1.38629 1.38629 1.38629 1.38629 0.04884 3.73674 3.73674 1.46634 0.26236 1.09861 0.40547 21 2.91044 0.32137 2.65062 1.89856 21 C - - < 1.38629 1.38629 1.38629 1.38629 0.04884 3.73674 3.73674 1.46634 0.26236 1.09861 0.40547 22 0.47829 2.44608 1.59992 2.39016 22 A - - < 1.38629 1.38629 1.38629 1.38629 0.04884 3.73674 3.73674 1.46634 0.26236 1.09861 0.40547 23 2.40592 2.94443 0.22115 2.88971 23 G - - < 1.38629 1.38629 1.38629 1.38629 0.04884 3.73674 3.73674 1.46634 0.26236 1.09861 0.40547 24 2.50473 0.28562 3.07268 2.11647 24 C - - - 1.38629 1.38629 1.38629 1.38629 0.04884 3.73674 3.73674 1.46634 0.26236 1.09861 0.40547 25 2.67113 1.68951 2.38673 0.42421 25 U - - < 1.38629 1.38629 1.38629 1.38629 0.04884 3.73674 3.73674 1.46634 0.26236 1.09861 0.40547 26 0.47823 2.44623 1.59993 2.39040 26 A - - < 1.38629 1.38629 1.38629 1.38629 0.04884 3.73674 3.73674 1.46634 0.26236 1.09861 0.40547 27 2.91604 0.32053 2.65301 1.89945 27 C - - < 1.38629 1.38629 1.38629 1.38629 0.04884 3.73674 3.73674 1.46634 0.26236 1.09861 0.40547 28 2.40609 2.94461 0.22111 2.88996 28 G - - < 1.38629 1.38629 1.38629 1.38629 0.04884 3.73674 3.73674 1.46634 0.26236 1.09861 0.40547 29 0.47819 2.44635 1.59994 2.39059 29 A - - < 1.38629 1.38629 1.38629 1.38629 0.04884 3.73674 3.73674 1.46634 0.26236 1.09861 0.40547 30 2.50473 0.28562 3.07268 2.11647 30 C - - - 1.38629 1.38629 1.38629 1.38629 0.04884 3.73674 3.73674 1.46634 0.26236 1.09861 0.40547 31 0.47862 2.44526 1.59987 2.38886 31 A - - < 1.38629 1.38629 1.38629 1.38629 0.04884 3.73674 3.73674 1.46634 0.26236 1.09861 0.40547 32 2.50388 0.85343 2.26189 0.94642 32 c - - < 1.38629 1.38629 1.38629 1.38629 0.04884 3.73674 3.73674 1.46634 0.26236 1.09861 0.40547 33 1.90139 2.50713 0.39086 2.37878 33 G - - < 1.38629 1.38629 1.38629 1.38629 0.04884 3.73674 3.73674 1.46634 0.26236 1.09861 0.40547 34 0.47815 2.44644 1.59995 2.39073 34 A - - < 1.38629 1.38629 1.38629 1.38629 0.04884 3.73674 3.73674 1.46634 0.26236 1.09861 0.40547 35 1.80097 2.60816 0.38709 2.49908 35 G - - < 1.38629 1.38629 1.38629 1.38629 0.04884 3.73674 3.73674 1.46634 0.26236 1.09861 0.40547 36 2.91483 0.32071 2.65249 1.89926 36 C - - < 1.38629 1.38629 1.38629 1.38629 0.04884 3.73674 3.73674 1.46634 0.26236 1.09861 0.40547 37 2.40518 2.94368 0.22136 2.88862 37 G - - < 1.38629 1.38629 1.38629 1.38629 0.04884 3.73674 3.73674 1.46634 0.26236 1.09861 0.40547 38 2.50473 0.28562 3.07268 2.11647 38 C - - _ 1.38629 1.38629 1.38629 1.38629 0.04884 3.73674 3.73674 1.46634 0.26236 1.09861 0.40547 39 2.34885 2.35825 2.85379 0.28461 39 U - - _ 1.38629 1.38629 1.38629 1.38629 0.04884 3.73674 3.73674 1.46634 0.26236 1.09861 0.40547 40 2.50473 0.28562 3.07268 2.11647 40 C - - _ 1.38629 1.38629 1.38629 1.38629 0.04884 3.73674 3.73674 1.46634 0.26236 1.09861 0.40547 41 2.50473 0.28562 3.07268 2.11647 41 C - - _ 1.38629 1.38629 1.38629 1.38629 0.04884 3.73674 3.73674 1.46634 0.26236 1.09861 0.40547 42 2.34885 2.35825 2.85379 0.28461 42 U - - _ 1.38629 1.38629 1.38629 1.38629 0.04884 3.73674 3.73674 1.46634 0.26236 1.09861 0.40547 43 3.10250 0.25957 2.77424 2.10965 43 C - - > 1.38629 1.38629 1.38629 1.38629 0.04884 3.73674 3.73674 1.46634 0.26236 1.09861 0.40547 44 2.17373 2.81926 0.27774 2.67217 44 G - - > 1.38629 1.38629 1.38629 1.38629 0.04884 3.73674 3.73674 1.46634 0.26236 1.09861 0.40547 45 2.71714 1.67320 2.41309 0.42045 45 U - - > 1.38629 1.38629 1.38629 1.38629 0.04884 3.73674 3.73674 1.46634 0.26236 1.09861 0.40547 46 2.62243 1.86239 2.26169 0.40362 46 U - - > 1.38629 1.38629 1.38629 1.38629 0.04884 3.73674 3.73674 1.46634 0.26236 1.09861 0.40547 47 2.61011 0.69656 2.32048 1.10882 47 c - - > 1.38629 1.38629 1.38629 1.38629 0.04884 3.73674 3.73674 1.46634 0.26236 1.09861 0.40547 48 1.81455 2.42443 0.43750 2.27391 48 G - - > 1.38629 1.38629 1.38629 1.38629 0.04884 3.73674 3.73674 1.46634 0.26236 1.09861 0.40547 49 2.62692 1.86270 2.26312 0.40284 49 U - - > 1.38629 1.38629 1.38629 1.38629 0.04884 3.73674 3.73674 1.46634 0.26236 1.09861 0.40547 50 2.50473 0.28562 3.07268 2.11647 50 C - - - 1.38629 1.38629 1.38629 1.38629 0.04884 3.73674 3.73674 1.46634 0.26236 1.09861 0.40547 51 2.62153 1.86233 2.26140 0.40378 51 U - - > 1.38629 1.38629 1.38629 1.38629 0.04884 3.73674 3.73674 1.46634 0.26236 1.09861 0.40547 52 3.10688 0.25904 2.77602 2.11049 52 C - - > 1.38629 1.38629 1.38629 1.38629 0.04884 3.73674 3.73674 1.46634 0.26236 1.09861 0.40547 53 2.17532 2.82119 0.27712 2.67466 53 G - - > 1.38629 1.38629 1.38629 1.38629 0.04884 3.73674 3.73674 1.46634 0.26236 1.09861 0.40547 54 2.62518 1.86258 2.26256 0.40314 54 U - - > 1.38629 1.38629 1.38629 1.38629 0.04884 3.73674 3.73674 1.46634 0.26236 1.09861 0.40547 55 0.48124 2.56896 1.52628 2.43011 55 A - - > 1.38629 1.38629 1.38629 1.38629 0.04884 3.73674 3.73674 1.46634 0.26236 1.09861 0.40547 56 0.21141 2.95638 2.70868 2.63211 56 A - - - 1.38629 1.38629 1.38629 1.38629 0.04884 3.73674 3.73674 1.46634 0.26236 1.09861 0.40547 57 3.10871 0.25881 2.77676 2.11085 57 C - - > 1.38629 1.38629 1.38629 1.38629 0.04884 3.73674 3.73674 1.46634 0.26236 1.09861 0.40547 58 2.62496 1.86257 2.26250 0.40318 58 U - - > 1.38629 1.38629 1.38629 1.38629 0.04884 3.73674 3.73674 1.46634 0.26236 1.09861 0.40547 59 2.17697 2.82317 0.27649 2.67722 59 G - - > 1.38629 1.38629 1.38629 1.38629 0.04884 3.73674 3.73674 1.46634 0.26236 1.09861 0.40547 60 2.50473 0.28562 3.07268 2.11647 60 C - - - 1.38629 1.38629 1.38629 1.38629 0.04884 3.73674 3.73674 1.46634 0.26236 1.09861 0.40547 61 3.10088 0.25976 2.77358 2.10933 61 C - - > 1.38629 1.38629 1.38629 1.38629 0.04884 3.73674 3.73674 1.46634 0.26236 1.09861 0.40547 62 3.10166 0.25967 2.77390 2.10948 62 C - - > 1.38629 1.38629 1.38629 1.38629 0.04884 3.73674 3.73674 1.46634 0.26236 1.09861 0.40547 63 2.48038 1.52569 2.21494 0.52821 63 U - - > 1.38629 1.38629 1.38629 1.38629 0.04884 3.73674 3.73674 1.46634 0.26236 1.09861 0.40547 64 2.17376 2.81931 0.27772 2.67223 64 G - - > 1.38629 1.38629 1.38629 1.38629 0.04884 3.73674 3.73674 1.46634 0.26236 1.09861 0.40547 65 0.48200 2.56659 1.52627 2.42690 65 A - - > 1.38629 1.38629 1.38629 1.38629 0.04884 3.73674 3.73674 1.46634 0.26236 1.09861 0.40547 66 0.48186 2.56701 1.52627 2.42747 66 A - - > 1.38629 1.38629 1.38629 1.38629 0.04884 3.73674 3.73674 1.46634 0.26236 1.09861 0.40547 67 2.17535 2.82122 0.27711 2.67470 67 G - - > 1.38629 1.38629 1.38629 1.38629 0.04884 3.73674 3.73674 1.46634 0.26236 1.09861 0.40547 68 2.17615 2.82218 0.27680 2.67595 68 G - - > 1.38629 1.38629 1.38629 1.38629 0.04884 3.73674 3.73674 1.46634 0.26236 1.09861 0.40547 69 2.62712 1.86271 2.26319 0.40280 69 U - - > 1.38629 1.38629 1.38629 1.38629 0.04884 3.73674 3.73674 1.46634 0.26236 1.09861 0.40547 70 0.90400 2.32240 1.05140 1.91350 70 a - - - 1.38629 1.38629 1.38629 1.38629 0.04884 3.73674 3.73674 1.46634 0.26236 1.09861 0.40547 71 2.17596 2.82195 0.27688 2.67565 71 G - - > 1.38629 1.38629 1.38629 1.38629 0.04884 3.73674 3.73674 1.46634 0.26236 1.09861 0.40547 72 2.62667 1.86268 2.26304 0.40288 72 U - - > 1.38629 1.38629 1.38629 1.38629 0.04884 3.73674 3.73674 1.46634 0.26236 1.09861 0.40547 73 2.50473 0.28562 3.07268 2.11647 73 C - - - 1.38629 1.38629 1.38629 1.38629 0.04884 3.73674 3.73674 1.46634 0.26236 1.09861 0.40547 74 2.50473 0.28562 3.07268 2.11647 74 C - - - 1.38629 1.38629 1.38629 1.38629 0.04884 3.73674 3.73674 1.46634 0.26236 1.09861 0.40547 75 2.34885 2.35825 2.85379 0.28461 75 U - - - 1.38629 1.38629 1.38629 1.38629 0.04884 3.73674 3.73674 1.46634 0.26236 1.09861 0.40547 76 2.17526 2.82111 0.27714 2.67456 76 G - - > 1.38629 1.38629 1.38629 1.38629 0.04884 3.73674 3.73674 1.46634 0.26236 1.09861 0.40547 77 2.17621 2.82225 0.27678 2.67604 77 G - - > 1.38629 1.38629 1.38629 1.38629 0.04884 3.73674 3.73674 1.46634 0.26236 1.09861 0.40547 78 2.51142 0.48183 2.22256 1.64576 78 C - - > 1.38629 1.38629 1.38629 1.38629 0.04884 3.73674 3.73674 1.46634 0.26236 1.09861 0.40547 79 1.95451 2.61249 0.36014 2.43684 79 G - - > 1.38629 1.38629 1.38629 1.38629 0.04884 3.73674 3.73674 1.46634 0.26236 1.09861 0.40547 80 2.63689 1.86337 2.26630 0.40112 80 U - - > 1.38629 1.38629 1.38629 1.38629 0.04884 3.73674 3.73674 1.46634 0.26236 1.09861 0.40547 81 3.14880 0.25408 2.79280 2.11847 81 C - - > 1.38629 1.38629 1.38629 1.38629 0.02472 3.71262 * 1.46634 0.26236 0.00000 * //