INFERNAL1/a [1.1.5 | Sep 2023] NAME mir-921 ACC RF03740 DESC mir-921 microRNA precursor family STATES 172 NODES 40 CLEN 56 W 71 ALPH RNA RF no CONS yes MAP yes DATE Mon Jul 8 03:54:42 2024 COM [1] /hps/software/users/agb/rfam/bin/cmbuild -F CM SEED COM [2] /hps/software/users/agb/rfam/bin/cmcalibrate --cpu 8 /nfs/production/agb/rfam/15/rescan/families/RF03740/CM PBEGIN 0.05 PEND 0.05 WBETA 1e-07 QDBBETA1 1e-07 QDBBETA2 1e-15 N2OMEGA 1.52588e-05 N3OMEGA 1.52588e-05 ELSELF -0.08926734 NSEQ 2 EFFN 1.769531 CKSUM 839249102 NULL 0.000 0.000 0.000 0.000 GA 80.00 TC 82.90 NC 70.30 EFP7GF -5.2429 0.72819 ECMLC 0.63986 -5.50297 3.49819 1600000 380631 0.003153 ECMGC 0.45893 -16.44188 -3.09369 1600000 183028 0.002185 ECMLI 0.63390 -4.09111 4.57766 1600000 292201 0.004107 ECMGI 0.45689 -12.93221 -0.56476 1600000 113784 0.003515 CM [ ROOT 0 ] - - - - - - S 0 -1 0 1 4 1 1 71 91 -6.881 -7.088 -0.056 -5.502 IL 1 1 2 1 4 1 10 76 96 -1.686 -2.369 -1.117 -4.855 0.000 0.000 0.000 0.000 IR 2 2 3 2 3 1 10 75 95 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 1 ] 1 - A - - - ML 3 2 3 5 5 1 11 72 91 -7.039 -0.041 -6.855 -7.067 -7.959 1.691 -2.247 -1.891 -1.777 D 4 2 3 5 5 0 4 70 90 -4.959 -0.803 -4.221 -2.596 -2.508 IL 5 5 3 5 5 1 8 72 91 -2.408 -0.496 -4.087 -5.920 -5.193 0.000 0.000 0.000 0.000 [ MATP 2 ] 2 56 C G - - MP 6 5 3 10 6 2 12 71 90 -9.082 -9.022 -0.021 -7.798 -8.078 -8.473 -4.427 -4.322 -4.137 -0.565 -2.883 -4.565 3.511 -3.680 -4.183 -0.307 -4.456 -2.267 0.644 -4.504 -0.586 -3.027 ML 7 5 3 10 6 1 5 69 89 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 8 5 3 10 6 1 5 69 89 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 9 5 3 10 6 0 1 67 86 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 10 10 5 10 6 1 7 70 90 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 11 11 6 11 5 1 7 70 89 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 3 ] 3 55 u g - - MP 12 11 6 16 6 2 12 69 88 -9.082 -9.022 -0.021 -7.798 -8.078 -8.473 -3.966 -3.881 -3.697 -0.228 -2.494 -4.142 1.789 -3.255 -3.736 -0.014 -4.041 -1.886 0.959 -4.063 2.922 -2.613 ML 13 11 6 16 6 1 5 67 87 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 14 11 6 16 6 1 5 67 86 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 15 11 6 16 6 0 1 65 84 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 16 16 5 16 6 1 7 68 88 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 17 17 6 17 5 1 7 68 87 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 4 ] 4 54 A U - - MP 18 17 6 22 6 2 11 67 86 -9.082 -9.022 -0.021 -7.798 -8.078 -8.473 -3.691 -2.749 -3.717 3.263 -4.006 -5.059 0.288 -3.765 -3.613 1.187 -4.156 -0.242 -0.130 -4.264 -1.654 -2.557 ML 19 17 6 22 6 1 5 65 85 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 20 17 6 22 6 1 4 65 85 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 21 17 6 22 6 0 1 63 82 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 22 22 5 22 6 1 6 66 86 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 23 23 6 23 5 1 6 66 85 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 5 ] 5 53 G C - - MP 24 23 6 28 6 2 10 65 84 -9.082 -9.022 -0.021 -7.798 -8.078 -8.473 -4.624 -3.038 -4.713 0.278 -5.067 -4.647 -0.460 -4.947 -4.250 3.609 -4.595 -0.733 -0.849 -4.390 -2.491 -3.592 ML 25 23 6 28 6 1 4 63 83 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 26 23 6 28 6 1 4 63 83 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 27 23 6 28 6 0 0 61 80 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 28 28 5 28 6 1 6 64 84 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 29 29 6 29 5 1 6 64 83 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 6 ] 6 52 U A - - MP 30 29 6 34 6 2 9 63 82 -9.082 -9.022 -0.021 -7.798 -8.078 -8.473 -4.063 -3.884 -3.915 -0.188 -2.885 -4.491 1.441 -3.571 -3.921 0.085 -4.301 -1.787 3.264 -4.219 -0.564 -2.758 ML 31 29 6 34 6 1 4 61 81 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 32 29 6 34 6 1 3 61 81 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 33 29 6 34 6 0 0 59 79 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 34 34 5 34 6 1 5 62 82 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 35 35 6 35 5 1 5 62 81 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 7 ] 7 51 G C - - MP 36 35 6 40 6 2 7 61 80 -9.082 -9.022 -0.021 -7.798 -8.078 -8.473 -4.624 -3.038 -4.713 0.278 -5.067 -4.647 -0.460 -4.947 -4.250 3.609 -4.595 -0.733 -0.849 -4.390 -2.491 -3.592 ML 37 35 6 40 6 1 3 60 79 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 38 35 6 40 6 1 2 60 79 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 39 35 6 40 6 0 0 58 78 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 40 40 5 40 6 1 4 60 80 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 41 41 6 41 5 1 4 60 80 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 8 ] 8 50 A U - - MP 42 41 6 46 4 2 5 59 78 -6.881 -7.088 -0.056 -5.502 -3.691 -2.749 -3.717 3.263 -4.006 -5.059 0.288 -3.765 -3.613 1.187 -4.156 -0.242 -0.130 -4.264 -1.654 -2.557 ML 43 41 6 46 4 1 2 59 79 -3.758 -3.940 -0.507 -2.670 0.368 -0.385 -0.191 0.094 MR 44 41 6 46 4 1 1 58 78 -4.809 -3.838 -1.706 -0.766 0.368 -0.385 -0.191 0.094 D 45 41 6 46 4 0 0 57 77 -4.568 -4.250 -2.265 -0.520 IL 46 46 5 46 4 1 4 60 80 -1.686 -2.369 -1.117 -4.855 0.000 0.000 0.000 0.000 IR 47 47 6 47 3 1 3 59 79 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 9 ] 9 - G - - - ML 48 47 6 50 3 1 4 56 75 -7.902 -0.022 -6.556 -1.448 -2.647 1.691 -2.033 D 49 47 6 50 3 0 0 55 74 -6.174 -1.687 -0.566 IL 50 50 3 50 3 1 3 58 78 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 10 ] 10 - G - - - ML 51 50 3 53 3 1 4 55 74 -7.902 -0.022 -6.556 -1.448 -2.647 1.691 -2.033 D 52 50 3 53 3 0 0 54 73 -6.174 -1.687 -0.566 IL 53 53 3 53 3 1 2 57 77 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 11 ] 11 - G - - - ML 54 53 3 56 3 1 3 54 73 -7.902 -0.022 -6.556 -1.448 -2.647 1.691 -2.033 D 55 53 3 56 3 0 0 53 72 -6.174 -1.687 -0.566 IL 56 56 3 56 3 1 2 56 76 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 12 ] 12 - A - - - ML 57 56 3 59 3 1 2 53 72 -8.297 -0.019 -6.614 1.691 -2.247 -1.891 -1.777 D 58 56 3 59 3 0 0 52 71 -5.620 -0.734 -1.403 IL 59 59 3 59 3 1 1 54 73 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 13 ] - 49 - A - - MR 60 59 3 62 3 1 2 52 71 -8.297 -0.019 -6.614 1.691 -2.247 -1.891 -1.777 D 61 59 3 62 3 0 0 50 70 -6.390 -1.568 -0.620 IR 62 62 3 62 3 1 1 53 72 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 14 ] - 48 - G - - MR 63 62 3 65 5 1 2 51 70 -7.039 -0.041 -6.855 -7.067 -7.959 -1.448 -2.647 1.691 -2.033 D 64 62 3 65 5 0 0 50 69 -5.352 -0.707 -2.978 -4.409 -2.404 IR 65 65 3 65 5 1 1 51 70 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 15 ] 13 47 C G - - MP 66 65 3 70 6 2 3 50 69 -9.082 -9.022 -0.021 -7.798 -8.078 -8.473 -4.427 -4.322 -4.137 -0.565 -2.883 -4.565 3.511 -3.680 -4.183 -0.307 -4.456 -2.267 0.644 -4.504 -0.586 -3.027 ML 67 65 3 70 6 1 1 49 68 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 68 65 3 70 6 1 1 48 68 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 69 65 3 70 6 0 0 46 66 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 70 70 5 70 6 1 1 50 69 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 71 71 6 71 5 1 1 49 69 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 16 ] 14 46 a u - - MP 72 71 6 76 6 2 2 48 67 -9.082 -9.022 -0.021 -7.798 -8.078 -8.473 -2.711 -2.391 -2.830 2.158 -2.711 -3.759 1.212 1.172 -2.822 1.243 -3.354 -0.305 0.840 -3.069 -0.605 -1.868 ML 73 71 6 76 6 1 1 47 67 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 74 71 6 76 6 1 1 47 66 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 75 71 6 76 6 0 0 45 65 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 76 76 5 76 6 1 1 48 67 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 77 77 6 77 5 1 1 47 67 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 17 ] 15 45 G C - - MP 78 77 6 82 4 2 2 46 65 -6.881 -7.088 -0.056 -5.502 -4.624 -3.038 -4.713 0.278 -5.067 -4.647 -0.460 -4.947 -4.250 3.609 -4.595 -0.733 -0.849 -4.390 -2.491 -3.592 ML 79 77 6 82 4 1 1 46 66 -3.758 -3.940 -0.507 -2.670 0.368 -0.385 -0.191 0.094 MR 80 77 6 82 4 1 1 46 65 -4.809 -3.838 -1.706 -0.766 0.368 -0.385 -0.191 0.094 D 81 77 6 82 4 0 0 45 64 -4.568 -4.250 -2.265 -0.520 IL 82 82 5 82 4 1 1 48 67 -1.686 -2.369 -1.117 -4.855 0.000 0.000 0.000 0.000 IR 83 83 6 83 3 1 1 47 66 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 18 ] 16 - A - - - ML 84 83 6 86 3 1 1 43 62 -7.902 -0.022 -6.556 1.691 -2.247 -1.891 -1.777 D 85 83 6 86 3 0 0 42 61 -6.174 -1.687 -0.566 IL 86 86 3 86 3 1 1 46 65 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 19 ] 17 - A - - - ML 87 86 3 89 3 1 1 42 61 -8.297 -0.019 -6.614 1.691 -2.247 -1.891 -1.777 D 88 86 3 89 3 0 0 41 60 -5.620 -0.734 -1.403 IL 89 89 3 89 3 1 1 43 62 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 20 ] - 44 - C - - MR 90 89 3 92 3 1 1 41 60 -8.297 -0.019 -6.614 -1.591 1.581 -2.410 -1.036 D 91 89 3 92 3 0 0 40 59 -6.390 -1.568 -0.620 IR 92 92 3 92 3 1 1 42 61 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 21 ] - 43 - G - - MR 93 92 3 95 5 1 1 40 59 -7.039 -0.041 -6.855 -7.067 -7.959 -1.448 -2.647 1.691 -2.033 D 94 92 3 95 5 0 0 39 58 -5.352 -0.707 -2.978 -4.409 -2.404 IR 95 95 3 95 5 1 1 41 60 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 22 ] 18 42 C G - - MP 96 95 3 100 6 2 2 39 58 -9.082 -9.022 -0.021 -7.798 -8.078 -8.473 -4.427 -4.322 -4.137 -0.565 -2.883 -4.565 3.511 -3.680 -4.183 -0.307 -4.456 -2.267 0.644 -4.504 -0.586 -3.027 ML 97 95 3 100 6 1 1 38 57 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 98 95 3 100 6 1 1 38 57 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 99 95 3 100 6 0 0 35 54 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 100 100 5 100 6 1 1 39 58 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 101 101 6 101 5 1 1 39 58 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 23 ] 19 41 C G - - MP 102 101 6 106 6 2 2 37 56 -9.082 -9.022 -0.021 -7.798 -8.078 -8.473 -4.427 -4.322 -4.137 -0.565 -2.883 -4.565 3.511 -3.680 -4.183 -0.307 -4.456 -2.267 0.644 -4.504 -0.586 -3.027 ML 103 101 6 106 6 1 1 36 55 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 104 101 6 106 6 1 1 36 55 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 105 101 6 106 6 0 0 34 53 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 106 106 5 106 6 1 1 37 56 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 107 107 6 107 5 1 1 37 56 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 24 ] 20 40 A U - - MP 108 107 6 112 4 2 2 35 54 -6.803 -8.048 -0.084 -4.502 -3.691 -2.749 -3.717 3.263 -4.006 -5.059 0.288 -3.765 -3.613 1.187 -4.156 -0.242 -0.130 -4.264 -1.654 -2.557 ML 109 107 6 112 4 1 1 35 54 -2.408 -4.532 -1.293 -1.473 0.368 -0.385 -0.191 0.094 MR 110 107 6 112 4 1 1 34 53 -4.102 -12.528 -0.390 -2.485 0.368 -0.385 -0.191 0.094 D 111 107 6 112 4 0 0 32 51 -12.737 -14.007 -2.036 -0.404 IL 112 112 5 112 4 1 1 35 54 -2.817 -4.319 -0.613 -2.698 0.000 0.000 0.000 0.000 IR 113 113 6 113 3 1 1 35 54 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 25 ] - 39 - A - - MR 114 113 6 116 5 1 1 33 52 -7.039 -0.041 -6.855 -7.067 -7.959 1.691 -2.247 -1.891 -1.777 D 115 113 6 116 5 0 0 32 51 -5.352 -0.707 -2.978 -4.409 -2.404 IR 116 116 3 116 5 1 1 34 52 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 26 ] 21 38 G C - - MP 117 116 3 121 6 2 2 32 51 -9.082 -9.022 -0.021 -7.798 -8.078 -8.473 -4.624 -3.038 -4.713 0.278 -5.067 -4.647 -0.460 -4.947 -4.250 3.609 -4.595 -0.733 -0.849 -4.390 -2.491 -3.592 ML 118 116 3 121 6 1 1 31 50 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 119 116 3 121 6 1 1 31 50 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 120 116 3 121 6 0 0 28 47 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 121 121 5 121 6 1 1 32 51 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 122 122 6 122 5 1 1 32 50 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 27 ] 22 37 G C - - MP 123 122 6 127 6 2 2 30 49 -9.082 -9.022 -0.021 -7.798 -8.078 -8.473 -4.624 -3.038 -4.713 0.278 -5.067 -4.647 -0.460 -4.947 -4.250 3.609 -4.595 -0.733 -0.849 -4.390 -2.491 -3.592 ML 124 122 6 127 6 1 1 29 48 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 125 122 6 127 6 1 1 29 48 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 126 122 6 127 6 0 0 26 45 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 127 127 5 127 6 1 1 30 49 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 128 128 6 128 5 1 1 30 48 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 28 ] 23 36 A U - - MP 129 128 6 133 6 2 2 28 47 -9.082 -9.022 -0.021 -7.798 -8.078 -8.473 -3.691 -2.749 -3.717 3.263 -4.006 -5.059 0.288 -3.765 -3.613 1.187 -4.156 -0.242 -0.130 -4.264 -1.654 -2.557 ML 130 128 6 133 6 1 1 27 46 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 131 128 6 133 6 1 1 27 46 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 132 128 6 133 6 0 0 25 44 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 133 133 5 133 6 1 1 28 47 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 134 134 6 134 5 1 1 28 46 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 29 ] 24 35 c g - - MP 135 134 6 139 6 2 2 26 45 -9.082 -9.022 -0.021 -7.798 -8.078 -8.473 -3.643 -3.626 -3.496 0.036 -2.423 -4.028 2.697 -3.149 -3.525 0.261 -3.894 -1.695 1.165 -3.773 1.894 -2.416 ML 136 134 6 139 6 1 1 26 45 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 137 134 6 139 6 1 1 25 44 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 138 134 6 139 6 0 0 24 43 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 139 139 5 139 6 1 1 26 45 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 140 140 6 140 5 1 1 26 45 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 30 ] 25 34 u g - - MP 141 140 6 145 4 2 2 24 43 -6.881 -7.088 -0.056 -5.502 -3.966 -3.881 -3.697 -0.228 -2.494 -4.142 1.789 -3.255 -3.736 -0.014 -4.041 -1.886 0.959 -4.063 2.922 -2.613 ML 142 140 6 145 4 1 1 25 44 -3.758 -3.940 -0.507 -2.670 0.368 -0.385 -0.191 0.094 MR 143 140 6 145 4 1 1 24 43 -4.809 -3.838 -1.706 -0.766 0.368 -0.385 -0.191 0.094 D 144 140 6 145 4 0 0 23 42 -4.568 -4.250 -2.265 -0.520 IL 145 145 5 145 4 1 1 26 45 -1.686 -2.369 -1.117 -4.855 0.000 0.000 0.000 0.000 IR 146 146 6 146 3 1 1 25 44 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 31 ] 26 - C - - - ML 147 146 6 149 3 1 1 21 40 -7.902 -0.022 -6.556 -1.591 1.581 -2.410 -1.036 D 148 146 6 149 3 0 0 20 39 -6.174 -1.687 -0.566 IL 149 149 3 149 3 1 1 24 43 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 32 ] 27 - A - - - ML 150 149 3 152 3 1 1 20 39 -7.902 -0.022 -6.556 1.691 -2.247 -1.891 -1.777 D 151 149 3 152 3 0 0 19 38 -6.174 -1.687 -0.566 IL 152 152 3 152 3 1 1 23 42 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 33 ] 28 - G - - - ML 153 152 3 155 3 1 1 19 37 -7.902 -0.022 -6.556 -1.448 -2.647 1.691 -2.033 D 154 152 3 155 3 0 0 18 37 -6.174 -1.687 -0.566 IL 155 155 3 155 3 1 1 22 41 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 34 ] 29 - A - - - ML 156 155 3 158 3 1 1 18 36 -7.902 -0.022 -6.556 1.691 -2.247 -1.891 -1.777 D 157 155 3 158 3 0 0 17 36 -6.174 -1.687 -0.566 IL 158 158 3 158 3 1 1 21 40 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 35 ] 30 - C - - - ML 159 158 3 161 3 1 1 16 35 -7.902 -0.022 -6.556 -1.591 1.581 -2.410 -1.036 D 160 158 3 161 3 0 0 16 34 -6.174 -1.687 -0.566 IL 161 161 3 161 3 1 1 20 38 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 36 ] 31 - u - - - ML 162 161 3 164 3 1 1 15 33 -7.902 -0.022 -6.556 -0.656 0.438 -1.428 0.713 D 163 161 3 164 3 0 0 15 33 -6.174 -1.687 -0.566 IL 164 164 3 164 3 1 1 19 37 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 37 ] 32 - C - - - ML 165 164 3 167 3 1 1 13 32 -7.902 -0.022 -6.556 -1.591 1.581 -2.410 -1.036 D 166 164 3 167 3 0 0 13 32 -6.174 -1.687 -0.566 IL 167 167 3 167 3 1 1 18 36 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 38 ] 33 - A - - - ML 168 167 3 170 2 1 1 1 1 * 0.000 1.691 -2.247 -1.891 -1.777 D 169 167 3 170 2 0 0 0 0 * 0.000 IL 170 170 3 170 2 1 1 13 28 -1.823 -0.479 0.000 0.000 0.000 0.000 [ END 39 ] - - - - - - E 171 170 3 -1 0 0 0 0 0 // HMMER3/f [3.4 | Aug 2023] NAME mir-921 ACC RF03740 DESC mir-921 microRNA precursor family LENG 56 MAXL 141 ALPH RNA RF no MM no CONS yes CS yes MAP yes DATE Mon Jul 8 03:54:42 2024 COM [1] /hps/software/users/agb/rfam/bin/cmbuild -F CM SEED COM [2] /hps/software/users/agb/rfam/bin/cmcalibrate --cpu 8 /nfs/production/agb/rfam/15/rescan/families/RF03740/CM NSEQ 2 EFFN 1.707031 CKSUM 839249102 STATS LOCAL MSV -8.0346 0.72819 STATS LOCAL VITERBI -8.9052 0.72819 STATS LOCAL FORWARD -2.8547 0.72819 HMM A C G U m->m m->i m->d i->m i->i d->m d->d COMPO 1.37186 1.37780 1.17787 1.68040 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 0.00000 * 1 0.22298 2.90871 2.66581 2.57997 1 A - - : 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 2 2.87278 0.33590 2.60140 1.86697 2 C - - < 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 3 2.64026 1.42609 2.38617 0.51679 3 U - - < 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 4 0.50488 2.39614 1.56408 2.34263 4 A - - < 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 5 2.37676 2.89387 0.23142 2.84079 5 G - - < 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 6 2.62912 1.65795 2.33604 0.44532 6 U - - < 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 7 2.37590 2.89302 0.23167 2.83956 7 G - - < 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 8 0.50519 2.39541 1.56405 2.34145 8 A - - < 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 9 2.35265 3.17742 0.22394 2.75161 9 G - - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 10 2.35265 3.17742 0.22394 2.75161 10 G - - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 11 2.35265 3.17742 0.22394 2.75161 11 G - - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 12 0.22298 2.90871 2.66581 2.57997 12 A - - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 13 2.86524 0.33707 2.59826 1.86581 13 C - - < 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 14 1.18255 1.21801 1.53352 1.70423 14 a - - < 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 15 2.37620 2.89332 0.23158 2.83999 15 G - - < 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 16 0.22298 2.90871 2.66581 2.57997 16 A - - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 17 0.22298 2.90871 2.66581 2.57997 17 A - - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 18 2.86504 0.33711 2.59818 1.86578 18 C - - < 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 19 2.86888 0.33650 2.59978 1.86637 19 C - - < 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 20 0.50508 2.39568 1.56406 2.34189 20 A - - < 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 21 2.36255 2.87975 0.23561 2.82036 21 G - - < 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 22 2.36911 2.88627 0.23367 2.82978 22 G - - < 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 23 0.50583 2.39390 1.56398 2.33903 23 A - - < 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 24 2.47147 0.86115 2.22665 0.95458 24 c - - < 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 25 2.63540 1.42637 2.38426 0.51756 25 U - - < 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 26 2.44789 0.30328 3.01352 2.07138 26 C - - _ 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 27 0.22298 2.90871 2.66581 2.57997 27 A - - _ 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 28 2.35265 3.17742 0.22394 2.75161 28 G - - _ 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 29 0.22298 2.90871 2.66581 2.57997 29 A - - _ 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 30 2.44789 0.30328 3.01352 2.07138 30 C - - _ 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 31 1.82765 1.08938 2.36082 0.89541 31 u - - _ 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 32 2.44789 0.30328 3.01352 2.07138 32 C - - _ 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 33 0.22298 2.90871 2.66581 2.57997 33 A - - _ 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 34 1.92288 2.55622 0.37928 2.38747 34 G - - > 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 35 1.79363 2.38804 0.45327 2.24162 35 G - - > 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 36 2.57168 1.82130 2.21068 0.42748 36 U - - > 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 37 3.05509 0.27132 2.72284 2.08089 37 C - - > 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 38 3.05620 0.27118 2.72328 2.08111 38 C - - > 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 39 0.22298 2.90871 2.66581 2.57997 39 A - - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 40 2.57510 1.82149 2.21174 0.42685 40 U - - > 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 41 2.14256 2.76895 0.29060 2.62969 41 G - - > 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 42 2.14343 2.76997 0.29024 2.63104 42 G - - > 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 43 2.35265 3.17742 0.22394 2.75161 43 G - - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 44 2.44789 0.30328 3.01352 2.07138 44 C - - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 45 3.06041 0.27064 2.72496 2.08192 45 C - - > 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 46 1.93599 1.74687 1.58691 0.74057 46 u - - > 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 47 2.14346 2.77000 0.29023 2.63108 47 G - - > 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 48 2.35265 3.17742 0.22394 2.75161 48 G - - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 49 0.22298 2.90871 2.66581 2.57997 49 A - - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 50 2.57174 1.82130 2.21070 0.42747 50 U - - > 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 51 3.05502 0.27133 2.72281 2.08088 51 C - - > 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 52 0.50706 2.51336 1.49460 2.38161 52 A - - > 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 53 3.05635 0.27116 2.72334 2.08114 53 C - - > 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 54 2.57294 1.82137 2.21107 0.42725 54 U - - > 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 55 1.92343 2.55689 0.37897 2.38835 55 G - - > 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 56 2.13935 2.76518 0.29190 2.62474 56 G - - > 1.38629 1.38629 1.38629 1.38629 0.02469 3.71357 * 1.46634 0.26236 0.00000 * //