INFERNAL1/a [1.1.5 | Sep 2023] NAME mir-8315 ACC RF03737 DESC mir-8315 microRNA precursor family STATES 184 NODES 43 CLEN 60 W 76 ALPH RNA RF no CONS yes MAP yes DATE Sat Jul 13 19:43:55 2024 COM [1] /hps/software/users/agb/rfam/bin/cmbuild -F CM SEED COM [2] /hps/software/users/agb/rfam/bin/cmcalibrate --cpu 8 /nfs/production/agb/rfam/15/rescan/families/RF03737/CM PBEGIN 0.05 PEND 0.05 WBETA 1e-07 QDBBETA1 1e-07 QDBBETA2 1e-15 N2OMEGA 1.52588e-05 N3OMEGA 1.52588e-05 ELSELF -0.08926734 NSEQ 2 EFFN 1.761719 CKSUM 1150504515 NULL 0.000 0.000 0.000 0.000 GA 80.00 TC 86.30 NC 40.80 EFP7GF -5.3389 0.72913 ECMLC 0.67025 -5.10553 3.57178 1600000 402750 0.002980 ECMGC 0.48644 -13.87311 -1.79487 1600000 142464 0.002808 ECMLI 0.65631 -3.64729 4.72985 1600000 293040 0.004095 ECMGI 0.53456 -9.36794 1.04754 1600000 104731 0.003819 CM [ ROOT 0 ] - - - - - - S 0 -1 0 1 4 1 1 76 96 -6.800 -8.045 -0.085 -4.499 IL 1 1 2 1 4 1 10 77 97 -2.817 -4.319 -0.613 -2.698 0.000 0.000 0.000 0.000 IR 2 2 3 2 3 1 11 78 97 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 1 ] - 60 - A - - MR 3 2 3 5 3 1 12 76 96 -8.294 -0.019 -6.612 1.689 -2.240 -1.885 -1.770 D 4 2 3 5 3 0 5 74 94 -6.390 -1.568 -0.620 IR 5 5 3 5 3 1 10 77 96 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 2 ] - 59 - G - - MR 6 5 3 8 5 1 12 75 95 -7.037 -0.041 -6.852 -7.064 -7.956 -1.441 -2.639 1.689 -2.025 D 7 5 3 8 5 0 4 73 93 -5.352 -0.707 -2.978 -4.409 -2.404 IR 8 8 3 8 5 1 9 75 95 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 3 ] 1 58 a u - - MP 9 8 3 13 6 2 13 74 94 -9.081 -9.020 -0.021 -7.797 -8.077 -8.472 -3.267 -2.309 -3.382 2.381 -3.913 -4.611 0.319 -3.564 -3.253 1.678 -3.787 1.967 0.055 -3.769 -1.572 -2.230 ML 10 8 3 13 6 1 6 72 92 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 11 8 3 13 6 1 6 72 92 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 12 8 3 13 6 0 2 70 90 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 13 13 5 13 6 1 8 73 93 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 14 14 6 14 5 1 8 73 93 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 4 ] 2 57 g c - - MP 15 14 6 19 6 2 12 72 92 -9.081 -9.020 -0.021 -7.797 -8.077 -8.472 -2.946 -2.379 -3.028 0.983 -3.126 -3.706 0.852 -3.345 -3.092 2.760 -3.552 -0.313 0.550 0.578 -0.956 -2.107 ML 16 14 6 19 6 1 6 70 90 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 17 14 6 19 6 1 6 70 90 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 18 14 6 19 6 0 1 68 88 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 19 19 5 19 6 1 7 71 91 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 20 20 6 20 5 1 8 71 91 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 5 ] 3 56 C G - - MP 21 20 6 25 6 2 12 70 90 -9.081 -9.020 -0.021 -7.797 -8.077 -8.472 -4.421 -4.315 -4.132 -0.559 -2.879 -4.560 3.509 -3.676 -4.177 -0.299 -4.452 -2.260 0.648 -4.498 -0.582 -3.021 ML 22 20 6 25 6 1 5 68 88 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 23 20 6 25 6 1 5 68 88 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 24 20 6 25 6 0 1 66 86 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 25 25 5 25 6 1 7 69 89 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 26 26 6 26 5 1 7 69 89 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 6 ] 4 55 C G - - MP 27 26 6 31 6 2 11 68 88 -9.081 -9.020 -0.021 -7.797 -8.077 -8.472 -4.421 -4.315 -4.132 -0.559 -2.879 -4.560 3.509 -3.676 -4.177 -0.299 -4.452 -2.260 0.648 -4.498 -0.582 -3.021 ML 28 26 6 31 6 1 5 66 86 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 29 26 6 31 6 1 5 66 86 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 30 26 6 31 6 0 1 64 84 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 31 31 5 31 6 1 6 67 87 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 32 32 6 32 5 1 7 67 87 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 7 ] 5 54 U A - - MP 33 32 6 37 6 2 9 66 86 -9.081 -9.020 -0.021 -7.797 -8.077 -8.472 -4.056 -3.877 -3.909 -0.182 -2.880 -4.486 1.445 -3.567 -3.915 0.093 -4.295 -1.780 3.260 -4.213 -0.560 -2.753 ML 34 32 6 37 6 1 5 64 84 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 35 32 6 37 6 1 4 64 84 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 36 32 6 37 6 0 1 62 82 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 37 37 5 37 6 1 6 65 85 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 38 38 6 38 5 1 6 65 85 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 8 ] 6 53 C G - - MP 39 38 6 43 6 2 8 64 84 -9.081 -9.020 -0.021 -7.797 -8.077 -8.472 -4.421 -4.315 -4.132 -0.559 -2.879 -4.560 3.509 -3.676 -4.177 -0.299 -4.452 -2.260 0.648 -4.498 -0.582 -3.021 ML 40 38 6 43 6 1 4 63 83 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 41 38 6 43 6 1 3 63 83 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 42 38 6 43 6 0 0 61 81 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 43 43 5 43 6 1 5 64 83 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 44 44 6 44 5 1 5 63 83 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 9 ] 7 52 A U - - MP 45 44 6 49 4 2 6 62 82 -6.878 -7.085 -0.056 -5.499 -3.686 -2.745 -3.712 3.259 -3.999 -5.052 0.294 -3.761 -3.609 1.192 -4.151 -0.239 -0.123 -4.257 -1.647 -2.553 ML 46 44 6 49 4 1 3 62 82 -3.758 -3.940 -0.507 -2.670 0.368 -0.385 -0.191 0.094 MR 47 44 6 49 4 1 1 62 82 -4.809 -3.838 -1.706 -0.766 0.368 -0.385 -0.191 0.094 D 48 44 6 49 4 0 0 60 81 -4.568 -4.250 -2.265 -0.520 IL 49 49 5 49 4 1 4 63 83 -1.686 -2.369 -1.117 -4.855 0.000 0.000 0.000 0.000 IR 50 50 6 50 3 1 4 62 82 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 10 ] 8 - a - - - ML 51 50 6 53 3 1 4 59 79 -7.899 -0.022 -6.553 0.693 -1.340 0.479 -0.750 D 52 50 6 53 3 0 0 58 78 -6.174 -1.687 -0.566 IL 53 53 3 53 3 1 3 61 81 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 11 ] 9 - A - - - ML 54 53 3 56 3 1 4 58 78 -8.294 -0.019 -6.612 1.689 -2.240 -1.885 -1.770 D 55 53 3 56 3 0 0 57 77 -5.620 -0.734 -1.403 IL 56 56 3 56 3 1 2 59 79 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 12 ] - 51 - A - - MR 57 56 3 59 3 1 3 57 77 -8.294 -0.019 -6.612 1.689 -2.240 -1.885 -1.770 D 58 56 3 59 3 0 0 56 75 -6.390 -1.568 -0.620 IR 59 59 3 59 3 1 2 58 78 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 13 ] - 50 - G - - MR 60 59 3 62 5 1 3 56 76 -7.037 -0.041 -6.852 -7.064 -7.956 -1.441 -2.639 1.689 -2.025 D 61 59 3 62 5 0 0 55 75 -5.352 -0.707 -2.978 -4.409 -2.404 IR 62 62 3 62 5 1 1 57 76 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 14 ] 10 49 C G - - MP 63 62 3 67 6 2 4 55 75 -9.081 -9.020 -0.021 -7.797 -8.077 -8.472 -4.421 -4.315 -4.132 -0.559 -2.879 -4.560 3.509 -3.676 -4.177 -0.299 -4.452 -2.260 0.648 -4.498 -0.582 -3.021 ML 64 62 3 67 6 1 1 55 74 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 65 62 3 67 6 1 1 54 74 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 66 62 3 67 6 0 0 53 72 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 67 67 5 67 6 1 1 55 75 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 68 68 6 68 5 1 1 55 74 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 15 ] 11 48 A U - - MP 69 68 6 73 4 2 2 53 73 -6.878 -7.085 -0.056 -5.499 -3.686 -2.745 -3.712 3.259 -3.999 -5.052 0.294 -3.761 -3.609 1.192 -4.151 -0.239 -0.123 -4.257 -1.647 -2.553 ML 70 68 6 73 4 1 1 54 73 -3.758 -3.940 -0.507 -2.670 0.368 -0.385 -0.191 0.094 MR 71 68 6 73 4 1 1 53 73 -4.809 -3.838 -1.706 -0.766 0.368 -0.385 -0.191 0.094 D 72 68 6 73 4 0 0 52 72 -4.568 -4.250 -2.265 -0.520 IL 73 73 5 73 4 1 1 55 75 -1.686 -2.369 -1.117 -4.855 0.000 0.000 0.000 0.000 IR 74 74 6 74 3 1 1 54 74 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 16 ] 12 - U - - - ML 75 74 6 77 3 1 1 51 70 -7.899 -0.022 -6.553 -1.366 -1.384 -2.093 1.582 D 76 74 6 77 3 0 0 50 69 -6.174 -1.687 -0.566 IL 77 77 3 77 3 1 1 53 73 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 17 ] 13 - U - - - ML 78 77 3 80 3 1 1 50 69 -8.294 -0.019 -6.612 -1.366 -1.384 -2.093 1.582 D 79 77 3 80 3 0 0 49 68 -5.620 -0.734 -1.403 IL 80 80 3 80 3 1 1 51 70 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 18 ] - 47 - C - - MR 81 80 3 83 3 1 1 49 68 -8.294 -0.019 -6.612 -1.584 1.579 -2.402 -1.030 D 82 80 3 83 3 0 0 47 67 -6.390 -1.568 -0.620 IR 83 83 3 83 3 1 1 50 69 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 19 ] - 46 - U - - MR 84 83 3 86 5 1 1 48 67 -7.037 -0.041 -6.852 -7.064 -7.956 -1.366 -1.384 -2.093 1.582 D 85 83 3 86 5 0 0 46 66 -5.352 -0.707 -2.978 -4.409 -2.404 IR 86 86 3 86 5 1 1 48 67 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 20 ] 14 45 C G - - MP 87 86 3 91 6 2 2 47 66 -9.081 -9.020 -0.021 -7.797 -8.077 -8.472 -4.421 -4.315 -4.132 -0.559 -2.879 -4.560 3.509 -3.676 -4.177 -0.299 -4.452 -2.260 0.648 -4.498 -0.582 -3.021 ML 88 86 3 91 6 1 1 45 65 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 89 86 3 91 6 1 1 45 65 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 90 86 3 91 6 0 0 43 62 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 91 91 5 91 6 1 1 46 66 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 92 92 6 92 5 1 1 46 65 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 21 ] 15 44 U A - - MP 93 92 6 97 6 2 2 45 64 -9.081 -9.020 -0.021 -7.797 -8.077 -8.472 -4.056 -3.877 -3.909 -0.182 -2.880 -4.486 1.445 -3.567 -3.915 0.093 -4.295 -1.780 3.260 -4.213 -0.560 -2.753 ML 94 92 6 97 6 1 1 43 63 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 95 92 6 97 6 1 1 43 63 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 96 92 6 97 6 0 0 41 60 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 97 97 5 97 6 1 1 44 64 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 98 98 6 98 5 1 1 44 63 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 22 ] 16 43 g c - - MP 99 98 6 103 6 2 2 43 62 -9.081 -9.020 -0.021 -7.797 -8.077 -8.472 -2.946 -2.379 -3.028 0.983 -3.126 -3.706 0.852 -3.345 -3.092 2.760 -3.552 -0.313 0.550 0.578 -0.956 -2.107 ML 100 98 6 103 6 1 1 41 61 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 101 98 6 103 6 1 1 41 61 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 102 98 6 103 6 0 0 39 58 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 103 103 5 103 6 1 1 42 62 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 104 104 6 104 5 1 1 42 61 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 23 ] 17 42 G C - - MP 105 104 6 109 6 2 2 41 60 -9.081 -9.020 -0.021 -7.797 -8.077 -8.472 -4.618 -3.035 -4.706 0.282 -5.058 -4.645 -0.453 -4.940 -4.246 3.607 -4.592 -0.730 -0.842 -4.386 -2.484 -3.585 ML 106 104 6 109 6 1 1 39 59 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 107 104 6 109 6 1 1 39 59 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 108 104 6 109 6 0 0 37 57 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 109 109 5 109 6 1 1 40 60 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 110 110 6 110 5 1 1 40 60 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 24 ] 18 41 U A - - MP 111 110 6 115 6 2 2 39 58 -9.081 -9.020 -0.021 -7.797 -8.077 -8.472 -4.056 -3.877 -3.909 -0.182 -2.880 -4.486 1.445 -3.567 -3.915 0.093 -4.295 -1.780 3.260 -4.213 -0.560 -2.753 ML 112 110 6 115 6 1 1 38 58 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 113 110 6 115 6 1 1 38 57 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 114 110 6 115 6 0 0 36 56 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 115 115 5 115 6 1 1 39 58 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 116 116 6 116 5 1 1 38 58 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 25 ] 19 40 A U - - MP 117 116 6 121 4 2 2 37 56 -6.878 -7.085 -0.056 -5.499 -3.686 -2.745 -3.712 3.259 -3.999 -5.052 0.294 -3.761 -3.609 1.192 -4.151 -0.239 -0.123 -4.257 -1.647 -2.553 ML 118 116 6 121 4 1 1 37 57 -3.758 -3.940 -0.507 -2.670 0.368 -0.385 -0.191 0.094 MR 119 116 6 121 4 1 1 37 56 -4.809 -3.838 -1.706 -0.766 0.368 -0.385 -0.191 0.094 D 120 116 6 121 4 0 0 36 55 -4.568 -4.250 -2.265 -0.520 IL 121 121 5 121 4 1 1 39 58 -1.686 -2.369 -1.117 -4.855 0.000 0.000 0.000 0.000 IR 122 122 6 122 3 1 1 38 57 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 26 ] 20 - U - - - ML 123 122 6 125 3 1 1 34 53 -7.899 -0.022 -6.553 -1.366 -1.384 -2.093 1.582 D 124 122 6 125 3 0 0 33 52 -6.174 -1.687 -0.566 IL 125 125 3 125 3 1 1 37 56 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 27 ] 21 - u - - - ML 126 125 3 128 5 1 1 33 52 -7.037 -0.041 -6.852 -7.064 -7.956 -0.335 -0.905 0.314 0.516 D 127 125 3 128 5 0 0 32 51 -4.959 -0.803 -4.221 -2.596 -2.508 IL 128 128 3 128 5 1 1 34 53 -2.408 -0.496 -4.087 -5.920 -5.193 0.000 0.000 0.000 0.000 [ MATP 28 ] 22 39 U A - - MP 129 128 3 133 6 2 2 32 51 -9.081 -9.020 -0.021 -7.797 -8.077 -8.472 -4.056 -3.877 -3.909 -0.182 -2.880 -4.486 1.445 -3.567 -3.915 0.093 -4.295 -1.780 3.260 -4.213 -0.560 -2.753 ML 130 128 3 133 6 1 1 31 50 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 131 128 3 133 6 1 1 31 50 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 132 128 3 133 6 0 0 28 47 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 133 133 5 133 6 1 1 32 51 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 134 134 6 134 5 1 1 32 51 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 29 ] 23 38 C G - - MP 135 134 6 139 6 2 2 30 49 -9.081 -9.020 -0.021 -7.797 -8.077 -8.472 -4.421 -4.315 -4.132 -0.559 -2.879 -4.560 3.509 -3.676 -4.177 -0.299 -4.452 -2.260 0.648 -4.498 -0.582 -3.021 ML 136 134 6 139 6 1 1 29 48 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 137 134 6 139 6 1 1 29 48 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 138 134 6 139 6 0 0 27 46 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 139 139 5 139 6 1 1 30 49 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 140 140 6 140 5 1 1 30 49 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 30 ] 24 37 G C - - MP 141 140 6 145 6 2 2 28 47 -9.081 -9.020 -0.021 -7.797 -8.077 -8.472 -4.618 -3.035 -4.706 0.282 -5.058 -4.645 -0.453 -4.940 -4.246 3.607 -4.592 -0.730 -0.842 -4.386 -2.484 -3.585 ML 142 140 6 145 6 1 1 28 47 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 143 140 6 145 6 1 1 27 46 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 144 140 6 145 6 0 0 26 45 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 145 145 5 145 6 1 1 28 47 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 146 146 6 146 5 1 1 28 47 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 31 ] 25 36 C G - - MP 147 146 6 151 4 2 2 26 45 -6.878 -7.085 -0.056 -5.499 -4.421 -4.315 -4.132 -0.559 -2.879 -4.560 3.509 -3.676 -4.177 -0.299 -4.452 -2.260 0.648 -4.498 -0.582 -3.021 ML 148 146 6 151 4 1 1 27 46 -3.758 -3.940 -0.507 -2.670 0.368 -0.385 -0.191 0.094 MR 149 146 6 151 4 1 1 26 46 -4.809 -3.838 -1.706 -0.766 0.368 -0.385 -0.191 0.094 D 150 146 6 151 4 0 0 25 45 -4.568 -4.250 -2.265 -0.520 IL 151 151 5 151 4 1 1 28 47 -1.686 -2.369 -1.117 -4.855 0.000 0.000 0.000 0.000 IR 152 152 6 152 3 1 1 27 46 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 32 ] 26 - a - - - ML 153 152 6 155 3 1 1 23 42 -7.899 -0.022 -6.553 0.693 -1.340 0.479 -0.750 D 154 152 6 155 3 0 0 22 41 -6.174 -1.687 -0.566 IL 155 155 3 155 3 1 1 26 45 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 33 ] 27 - A - - - ML 156 155 3 158 3 1 1 22 41 -7.899 -0.022 -6.553 1.689 -2.240 -1.885 -1.770 D 157 155 3 158 3 0 0 21 40 -6.174 -1.687 -0.566 IL 158 158 3 158 3 1 1 25 44 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 34 ] 28 - A - - - ML 159 158 3 161 3 1 1 21 40 -7.899 -0.022 -6.553 1.689 -2.240 -1.885 -1.770 D 160 158 3 161 3 0 0 20 39 -6.174 -1.687 -0.566 IL 161 161 3 161 3 1 1 24 43 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 35 ] 29 - U - - - ML 162 161 3 164 3 1 1 20 39 -7.899 -0.022 -6.553 -1.366 -1.384 -2.093 1.582 D 163 161 3 164 3 0 0 19 38 -6.174 -1.687 -0.566 IL 164 164 3 164 3 1 1 23 42 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 36 ] 30 - U - - - ML 165 164 3 167 3 1 1 19 37 -7.899 -0.022 -6.553 -1.366 -1.384 -2.093 1.582 D 166 164 3 167 3 0 0 18 37 -6.174 -1.687 -0.566 IL 167 167 3 167 3 1 1 22 41 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 37 ] 31 - G - - - ML 168 167 3 170 3 1 1 17 36 -7.899 -0.022 -6.553 -1.441 -2.639 1.689 -2.025 D 169 167 3 170 3 0 0 17 36 -6.174 -1.687 -0.566 IL 170 170 3 170 3 1 1 21 39 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 38 ] 32 - A - - - ML 171 170 3 173 3 1 1 16 35 -7.899 -0.022 -6.553 1.689 -2.240 -1.885 -1.770 D 172 170 3 173 3 0 0 16 34 -6.174 -1.687 -0.566 IL 173 173 3 173 3 1 1 20 38 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 39 ] 33 - A - - - ML 174 173 3 176 3 1 1 15 33 -7.899 -0.430 -1.979 1.689 -2.240 -1.885 -1.770 D 175 173 3 176 3 0 0 15 33 -6.174 -1.687 -0.566 IL 176 176 3 176 3 1 1 19 37 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 40 ] 34 - A - - - ML 177 176 3 179 3 1 1 13 32 -7.497 -0.029 -6.152 1.421 -1.469 -1.189 -0.938 D 178 176 3 179 3 0 0 12 31 -7.828 -3.341 -0.157 IL 179 179 3 179 3 1 1 18 36 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 41 ] 35 - A - - - ML 180 179 3 182 2 1 1 1 1 * 0.000 1.421 -1.469 -1.189 -0.938 D 181 179 3 182 2 0 0 0 0 * 0.000 IL 182 182 3 182 2 1 1 13 28 -1.823 -0.479 0.000 0.000 0.000 0.000 [ END 42 ] - - - - - - E 183 182 3 -1 0 0 0 0 0 // HMMER3/f [3.4 | Aug 2023] NAME mir-8315 ACC RF03737 DESC mir-8315 microRNA precursor family LENG 60 MAXL 146 ALPH RNA RF no MM no CONS yes CS yes MAP yes DATE Sat Jul 13 19:43:55 2024 COM [1] /hps/software/users/agb/rfam/bin/cmbuild -F CM SEED COM [2] /hps/software/users/agb/rfam/bin/cmcalibrate --cpu 8 /nfs/production/agb/rfam/15/rescan/families/RF03737/CM NSEQ 2 EFFN 1.730469 CKSUM 1150504515 STATS LOCAL MSV -8.0846 0.72913 STATS LOCAL VITERBI -9.1615 0.72913 STATS LOCAL FORWARD -3.0958 0.72913 HMM A C G U m->m m->i m->d i->m i->i d->m d->d COMPO 1.33096 1.51763 1.31940 1.38930 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 0.00000 * 1 1.05466 2.37796 0.79537 2.22993 1 g - - < 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 2 1.86924 2.01771 0.73214 1.46135 2 g - - < 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 3 2.87958 0.33238 2.61344 1.87504 3 C - - < 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 4 2.88067 0.33222 2.61390 1.87521 4 C - - < 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 5 2.63995 1.66650 2.34964 0.43955 5 U - - < 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 6 2.88068 0.33222 2.61390 1.87521 6 C - - < 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 7 0.49779 2.40895 1.57379 2.35431 7 A - - < 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 8 0.90765 2.30785 1.05771 1.89845 8 a - - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 9 0.21973 2.92180 2.67758 2.59428 9 A - - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 10 2.87719 0.33276 2.61244 1.87467 10 C - - < 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 11 0.49771 2.40914 1.57380 2.35461 11 A - - < 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 12 2.31751 2.33252 2.82067 0.29455 12 U - - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 13 2.31751 2.33252 2.82067 0.29455 13 U - - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 14 2.87774 0.33267 2.61267 1.87475 14 C - - < 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 15 2.64042 1.66650 2.34982 0.43948 15 U - - < 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 16 1.87066 2.01828 0.73144 1.46155 16 g - - < 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 17 2.38441 2.90745 0.22864 2.85375 17 G - - < 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 18 2.64104 1.66650 2.35005 0.43937 18 U - - < 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 19 0.49765 2.40928 1.57380 2.35484 19 A - - < 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 20 2.31751 2.33252 2.82067 0.29455 20 U - - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 21 1.61445 2.00912 1.17155 1.03000 21 u - - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 22 2.64034 1.66650 2.34979 0.43949 22 U - - < 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 23 2.88237 0.33195 2.61461 1.87547 23 C - - < 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 24 2.38422 2.90726 0.22869 2.85348 24 G - - < 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 25 2.88201 0.33201 2.61446 1.87542 25 C - - < 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 26 0.90765 2.30785 1.05771 1.89845 26 a - - _ 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 27 0.21973 2.92180 2.67758 2.59428 27 A - - _ 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 28 0.21973 2.92180 2.67758 2.59428 28 A - - _ 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 29 2.31751 2.33252 2.82067 0.29455 29 U - - _ 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 30 2.31751 2.33252 2.82067 0.29455 30 U - - _ 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 31 2.36665 3.19377 0.22014 2.76805 31 G - - _ 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 32 0.21973 2.92180 2.67758 2.59428 32 A - - _ 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 33 0.21973 2.92180 2.67758 2.59428 33 A - - _ 1.38629 1.38629 1.38629 1.38629 0.33102 3.73767 1.35479 1.46634 0.26236 1.09861 0.40547 34 0.40626 2.39445 2.20098 2.02535 34 A - - _ 1.38629 1.38629 1.38629 1.38629 0.06420 3.47085 3.47085 1.46634 0.26236 2.55226 0.08111 35 0.40626 2.39445 2.20098 2.02535 35 A - - _ 1.38629 1.38629 1.38629 1.38629 0.06420 3.47085 3.47085 1.46634 0.26236 0.16938 1.85911 36 2.14846 2.77971 0.28805 2.63732 36 G - - > 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 37 3.06331 0.26864 2.73505 2.08783 37 C - - > 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 38 2.14650 2.77739 0.28883 2.63429 38 G - - > 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 39 0.50168 2.52314 1.50322 2.38743 39 A - - > 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 40 2.58558 1.83248 2.22458 0.42081 40 U - - > 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 41 0.50003 2.52804 1.50317 2.39416 41 A - - > 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 42 3.07175 0.26757 2.73843 2.08947 42 C - - > 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 43 2.14200 0.64206 1.83120 1.62887 43 C - - > 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 44 0.49955 2.52947 1.50315 2.39613 44 A - - > 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 45 2.15260 2.78460 0.28639 2.64373 45 G - - > 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 46 2.31751 2.33252 2.82067 0.29455 46 U - - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 47 2.46346 0.29831 3.02976 2.08373 47 C - - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 48 2.58957 1.83272 2.22582 0.42009 48 U - - > 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 49 2.15253 2.78451 0.28642 2.64361 49 G - - > 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 50 2.36665 3.19377 0.22014 2.76805 50 G - - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 51 0.21973 2.92180 2.67758 2.59428 51 A - - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 52 2.58434 1.83240 2.22419 0.42103 52 U - - > 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 53 2.14908 2.78043 0.28780 2.63827 53 G - - > 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 54 0.50017 2.52764 1.50317 2.39361 54 A - - > 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 55 2.14975 2.78123 0.28753 2.63932 55 G - - > 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 56 2.15021 2.78177 0.28735 2.64002 56 G - - > 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 57 2.14181 0.64213 1.83116 1.62883 57 C - - > 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 58 2.45763 1.50705 2.18724 0.54374 58 U - - > 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 59 2.36665 3.19377 0.22014 2.76805 59 G - - : 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 60 0.21973 2.92180 2.67758 2.59428 60 A - - : 1.38629 1.38629 1.38629 1.38629 0.02469 3.71357 * 1.46634 0.26236 0.00000 * //