INFERNAL1/a [1.1.5 | Sep 2023] NAME mir-7615 ACC RF03730 DESC mir-7615 microRNA precursor family STATES 196 NODES 41 CLEN 64 W 80 ALPH RNA RF no CONS yes MAP yes DATE Thu Jul 4 18:29:41 2024 COM [1] /hps/software/users/agb/rfam/bin/cmbuild -F CM SEED COM [2] /hps/software/users/agb/rfam/bin/cmcalibrate --cpu 8 /nfs/production/agb/rfam/15/rescan/families/RF03730/CM PBEGIN 0.05 PEND 0.05 WBETA 1e-07 QDBBETA1 1e-07 QDBBETA2 1e-15 N2OMEGA 1.52588e-05 N3OMEGA 1.52588e-05 ELSELF -0.08926734 NSEQ 2 EFFN 1.394531 CKSUM 668421493 NULL 0.000 0.000 0.000 0.000 GA 90.00 TC 98.40 NC 45.20 EFP7GF -6.5581 0.72389 ECMLC 0.69196 -4.39246 3.88047 1600000 367536 0.003265 ECMGC 0.47659 -14.20809 -1.16691 1600000 200146 0.001999 ECMLI 0.67957 -2.98348 4.98738 1600000 270172 0.004442 ECMGI 0.51583 -9.10166 1.89806 1600000 116481 0.003434 CM [ ROOT 0 ] - - - - - - S 0 -1 0 1 4 1 1 80 99 -6.647 -7.893 -0.094 -4.346 IL 1 1 2 1 4 1 4 81 101 -2.817 -4.319 -0.613 -2.698 0.000 0.000 0.000 0.000 IR 2 2 3 2 3 1 6 81 101 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 1 ] - 64 - G - - MR 3 2 3 5 3 1 7 80 99 -8.151 -0.022 -6.469 -1.113 -2.253 1.588 -1.638 D 4 2 3 5 3 0 1 78 98 -6.390 -1.568 -0.620 IR 5 5 3 5 3 1 5 80 100 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 2 ] - 63 - C - - MR 6 5 3 8 5 1 6 79 98 -6.904 -0.045 -6.719 -6.932 -7.823 -1.225 1.449 -2.026 -0.746 D 7 5 3 8 5 0 0 77 97 -5.352 -0.707 -2.978 -4.409 -2.404 IR 8 8 3 8 5 1 4 79 98 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 3 ] 1 62 A U - - MP 9 8 3 13 6 2 8 78 97 -9.021 -8.961 -0.022 -7.737 -8.017 -8.412 -3.455 -2.578 -3.494 3.056 -3.668 -4.707 0.612 -3.555 -3.404 1.445 -3.934 -0.115 0.192 -3.949 -1.332 -2.351 ML 10 8 3 13 6 1 2 76 96 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 11 8 3 13 6 1 2 76 95 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 12 8 3 13 6 0 0 74 93 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 13 13 5 13 6 1 3 77 97 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 14 14 6 14 5 1 3 77 96 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 4 ] 2 61 G C - - MP 15 14 6 19 6 2 7 76 95 -9.021 -8.961 -0.022 -7.737 -8.017 -8.412 -4.318 -2.894 -4.388 0.474 -4.635 -4.521 -0.102 -4.593 -4.037 3.517 -4.407 -0.582 -0.501 -4.186 -2.118 -3.271 ML 16 14 6 19 6 1 2 74 94 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 17 14 6 19 6 1 2 74 93 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 18 14 6 19 6 0 0 72 91 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 19 19 5 19 6 1 3 75 95 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 20 20 6 20 5 1 3 75 94 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 5 ] 3 60 A U - - MP 21 20 6 25 6 2 7 74 93 -9.021 -8.961 -0.022 -7.737 -8.017 -8.412 -3.455 -2.578 -3.494 3.056 -3.668 -4.707 0.612 -3.555 -3.404 1.445 -3.934 -0.115 0.192 -3.949 -1.332 -2.351 ML 22 20 6 25 6 1 2 72 92 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 23 20 6 25 6 1 2 72 91 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 24 20 6 25 6 0 0 70 89 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 25 25 5 25 6 1 2 73 93 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 26 26 6 26 5 1 3 73 92 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 6 ] 4 59 U A - - MP 27 26 6 31 6 2 6 72 91 -9.021 -8.961 -0.022 -7.737 -8.017 -8.412 -3.764 -3.569 -3.646 0.102 -2.686 -4.248 1.631 -3.349 -3.657 0.432 -4.050 -1.480 3.075 -3.928 -0.373 -2.519 ML 28 26 6 31 6 1 2 70 90 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 29 26 6 31 6 1 1 70 90 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 30 26 6 31 6 0 0 68 87 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 31 31 5 31 6 1 2 71 91 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 32 32 6 32 5 1 2 71 90 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 7 ] 5 58 C G - - MP 33 32 6 37 6 2 6 70 89 -9.021 -8.961 -0.022 -7.737 -8.017 -8.412 -4.118 -3.981 -3.878 -0.258 -2.699 -4.345 3.391 -3.464 -3.916 0.056 -4.220 -1.924 0.854 -4.214 -0.398 -2.772 ML 34 32 6 37 6 1 1 68 88 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 35 32 6 37 6 1 1 68 88 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 36 32 6 37 6 0 0 66 86 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 37 37 5 37 6 1 2 69 89 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 38 38 6 38 5 1 2 69 88 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 8 ] 6 57 U A - - MP 39 38 6 43 6 2 4 68 87 -9.021 -8.961 -0.022 -7.737 -8.017 -8.412 -3.764 -3.569 -3.646 0.102 -2.686 -4.248 1.631 -3.349 -3.657 0.432 -4.050 -1.480 3.075 -3.928 -0.373 -2.519 ML 40 38 6 43 6 1 1 67 86 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 41 38 6 43 6 1 1 66 86 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 42 38 6 43 6 0 0 65 84 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 43 43 5 43 6 1 2 67 87 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 44 44 6 44 5 1 2 67 87 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 9 ] 7 56 A U - - MP 45 44 6 49 4 2 3 66 85 -6.710 -6.917 -0.063 -5.331 -3.455 -2.578 -3.494 3.056 -3.668 -4.707 0.612 -3.555 -3.404 1.445 -3.934 -0.115 0.192 -3.949 -1.332 -2.351 ML 46 44 6 49 4 1 1 66 86 -3.758 -3.940 -0.507 -2.670 0.368 -0.385 -0.191 0.094 MR 47 44 6 49 4 1 1 65 85 -4.809 -3.838 -1.706 -0.766 0.368 -0.385 -0.191 0.094 D 48 44 6 49 4 0 0 64 84 -4.568 -4.250 -2.265 -0.520 IL 49 49 5 49 4 1 1 67 87 -1.686 -2.369 -1.117 -4.855 0.000 0.000 0.000 0.000 IR 50 50 6 50 3 1 1 66 86 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 10 ] 8 - C - - - ML 51 50 6 53 5 1 2 63 82 -6.904 -0.045 -6.719 -6.932 -7.823 -1.225 1.449 -2.026 -0.746 D 52 50 6 53 5 0 0 62 81 -4.959 -0.803 -4.221 -2.596 -2.508 IL 53 53 3 53 5 1 1 63 83 -2.408 -0.496 -4.087 -5.920 -5.193 0.000 0.000 0.000 0.000 [ MATP 11 ] 9 55 A U - - MP 54 53 3 58 6 2 3 62 81 -9.021 -8.961 -0.022 -7.737 -8.017 -8.412 -3.455 -2.578 -3.494 3.056 -3.668 -4.707 0.612 -3.555 -3.404 1.445 -3.934 -0.115 0.192 -3.949 -1.332 -2.351 ML 55 53 3 58 6 1 1 61 80 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 56 53 3 58 6 1 1 60 80 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 57 53 3 58 6 0 0 58 77 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 58 58 5 58 6 1 1 62 81 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 59 59 6 59 5 1 1 61 81 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 12 ] 10 54 C G - - MP 60 59 6 64 6 2 3 60 79 -9.021 -8.961 -0.022 -7.737 -8.017 -8.412 -4.118 -3.981 -3.878 -0.258 -2.699 -4.345 3.391 -3.464 -3.916 0.056 -4.220 -1.924 0.854 -4.214 -0.398 -2.772 ML 61 59 6 64 6 1 1 59 78 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 62 59 6 64 6 1 1 58 78 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 63 59 6 64 6 0 0 56 75 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 64 64 5 64 6 1 1 60 79 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 65 65 6 65 5 1 1 59 79 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 13 ] 11 53 u g - - MP 66 65 6 70 6 2 2 58 77 -9.021 -8.961 -0.022 -7.737 -8.017 -8.412 -3.661 -3.561 -3.460 0.060 -2.362 -3.958 1.911 -3.090 -3.497 0.331 -3.835 -1.576 1.128 -3.785 2.670 -2.391 ML 67 65 6 70 6 1 1 57 76 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 68 65 6 70 6 1 1 56 76 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 69 65 6 70 6 0 0 54 73 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 70 70 5 70 6 1 1 58 77 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 71 71 6 71 5 1 1 57 77 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 14 ] 12 52 C G - - MP 72 71 6 76 6 2 2 56 75 -9.021 -8.961 -0.022 -7.737 -8.017 -8.412 -4.118 -3.981 -3.878 -0.258 -2.699 -4.345 3.391 -3.464 -3.916 0.056 -4.220 -1.924 0.854 -4.214 -0.398 -2.772 ML 73 71 6 76 6 1 1 55 74 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 74 71 6 76 6 1 1 54 74 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 75 71 6 76 6 0 0 52 72 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 76 76 5 76 6 1 1 56 75 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 77 77 6 77 5 1 1 55 75 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 15 ] 13 51 U A - - MP 78 77 6 82 6 2 2 54 73 -9.021 -8.961 -0.022 -7.737 -8.017 -8.412 -3.764 -3.569 -3.646 0.102 -2.686 -4.248 1.631 -3.349 -3.657 0.432 -4.050 -1.480 3.075 -3.928 -0.373 -2.519 ML 79 77 6 82 6 1 1 53 72 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 80 77 6 82 6 1 1 53 72 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 81 77 6 82 6 0 0 50 70 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 82 82 5 82 6 1 1 54 73 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 83 83 6 83 5 1 1 53 73 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 16 ] 14 50 G C - - MP 84 83 6 88 6 2 2 52 71 -9.021 -8.961 -0.022 -7.737 -8.017 -8.412 -4.318 -2.894 -4.388 0.474 -4.635 -4.521 -0.102 -4.593 -4.037 3.517 -4.407 -0.582 -0.501 -4.186 -2.118 -3.271 ML 85 83 6 88 6 1 1 51 71 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 86 83 6 88 6 1 1 51 70 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 87 83 6 88 6 0 0 49 69 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 88 88 5 88 6 1 1 52 71 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 89 89 6 89 5 1 1 51 71 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 17 ] 15 49 A U - - MP 90 89 6 94 4 2 2 50 69 -6.710 -6.917 -0.063 -5.331 -3.455 -2.578 -3.494 3.056 -3.668 -4.707 0.612 -3.555 -3.404 1.445 -3.934 -0.115 0.192 -3.949 -1.332 -2.351 ML 91 89 6 94 4 1 1 50 70 -3.758 -3.940 -0.507 -2.670 0.368 -0.385 -0.191 0.094 MR 92 89 6 94 4 1 1 50 69 -4.809 -3.838 -1.706 -0.766 0.368 -0.385 -0.191 0.094 D 93 89 6 94 4 0 0 49 68 -4.568 -4.250 -2.265 -0.520 IL 94 94 5 94 4 1 1 52 71 -1.686 -2.369 -1.117 -4.855 0.000 0.000 0.000 0.000 IR 95 95 6 95 3 1 1 51 70 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 18 ] 16 - A - - - ML 96 95 6 98 5 1 1 47 67 -6.904 -0.045 -6.719 -6.932 -7.823 1.605 -1.935 -1.611 -1.438 D 97 95 6 98 5 0 0 46 65 -4.959 -0.803 -4.221 -2.596 -2.508 IL 98 98 3 98 5 1 1 48 67 -2.408 -0.496 -4.087 -5.920 -5.193 0.000 0.000 0.000 0.000 [ MATP 19 ] 17 48 C G - - MP 99 98 3 103 6 2 2 46 65 -9.021 -8.961 -0.022 -7.737 -8.017 -8.412 -4.118 -3.981 -3.878 -0.258 -2.699 -4.345 3.391 -3.464 -3.916 0.056 -4.220 -1.924 0.854 -4.214 -0.398 -2.772 ML 100 98 3 103 6 1 1 45 64 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 101 98 3 103 6 1 1 45 64 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 102 98 3 103 6 0 0 42 62 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 103 103 5 103 6 1 1 46 65 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 104 104 6 104 5 1 1 46 65 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 20 ] 18 47 U A - - MP 105 104 6 109 6 2 2 44 63 -9.021 -8.961 -0.022 -7.737 -8.017 -8.412 -3.764 -3.569 -3.646 0.102 -2.686 -4.248 1.631 -3.349 -3.657 0.432 -4.050 -1.480 3.075 -3.928 -0.373 -2.519 ML 106 104 6 109 6 1 1 43 62 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 107 104 6 109 6 1 1 43 62 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 108 104 6 109 6 0 0 40 60 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 109 109 5 109 6 1 1 44 63 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 110 110 6 110 5 1 1 44 63 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 21 ] 19 46 u g - - MP 111 110 6 115 6 2 2 42 61 -9.021 -8.961 -0.022 -7.737 -8.017 -8.412 -3.661 -3.561 -3.460 0.060 -2.362 -3.958 1.911 -3.090 -3.497 0.331 -3.835 -1.576 1.128 -3.785 2.670 -2.391 ML 112 110 6 115 6 1 1 41 60 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 113 110 6 115 6 1 1 41 60 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 114 110 6 115 6 0 0 38 58 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 115 115 5 115 6 1 1 42 61 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 116 116 6 116 5 1 1 42 61 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 22 ] 20 45 C G - - MP 117 116 6 121 6 2 2 40 59 -9.021 -8.961 -0.022 -7.737 -8.017 -8.412 -4.118 -3.981 -3.878 -0.258 -2.699 -4.345 3.391 -3.464 -3.916 0.056 -4.220 -1.924 0.854 -4.214 -0.398 -2.772 ML 118 116 6 121 6 1 1 39 58 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 119 116 6 121 6 1 1 39 58 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 120 116 6 121 6 0 0 36 56 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 121 121 5 121 6 1 1 40 59 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 122 122 6 122 5 1 1 40 59 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 23 ] 21 44 U A - - MP 123 122 6 127 6 2 2 38 57 -9.021 -8.961 -0.022 -7.737 -8.017 -8.412 -3.764 -3.569 -3.646 0.102 -2.686 -4.248 1.631 -3.349 -3.657 0.432 -4.050 -1.480 3.075 -3.928 -0.373 -2.519 ML 124 122 6 127 6 1 1 37 56 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 125 122 6 127 6 1 1 37 56 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 126 122 6 127 6 0 0 34 54 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 127 127 5 127 6 1 1 38 57 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 128 128 6 128 5 1 1 38 57 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 24 ] 22 43 A U - - MP 129 128 6 133 6 2 2 36 55 -9.021 -8.961 -0.022 -7.737 -8.017 -8.412 -3.455 -2.578 -3.494 3.056 -3.668 -4.707 0.612 -3.555 -3.404 1.445 -3.934 -0.115 0.192 -3.949 -1.332 -2.351 ML 130 128 6 133 6 1 1 35 54 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 131 128 6 133 6 1 1 35 54 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 132 128 6 133 6 0 0 33 52 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 133 133 5 133 6 1 1 36 55 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 134 134 6 134 5 1 1 36 55 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 25 ] 23 42 C G - - MP 135 134 6 139 6 2 2 34 53 -9.021 -8.961 -0.022 -7.737 -8.017 -8.412 -4.118 -3.981 -3.878 -0.258 -2.699 -4.345 3.391 -3.464 -3.916 0.056 -4.220 -1.924 0.854 -4.214 -0.398 -2.772 ML 136 134 6 139 6 1 1 33 52 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 137 134 6 139 6 1 1 33 52 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 138 134 6 139 6 0 0 31 50 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 139 139 5 139 6 1 1 34 53 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 140 140 6 140 5 1 1 34 53 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 26 ] 24 41 U A - - MP 141 140 6 145 4 2 2 32 51 -6.647 -7.893 -0.094 -4.346 -3.764 -3.569 -3.646 0.102 -2.686 -4.248 1.631 -3.349 -3.657 0.432 -4.050 -1.480 3.075 -3.928 -0.373 -2.519 ML 142 140 6 145 4 1 1 32 51 -2.408 -4.532 -1.293 -1.473 0.368 -0.385 -0.191 0.094 MR 143 140 6 145 4 1 1 31 51 -4.102 -12.528 -0.390 -2.485 0.368 -0.385 -0.191 0.094 D 144 140 6 145 4 0 0 30 49 -12.737 -14.007 -2.036 -0.404 IL 145 145 5 145 4 1 1 32 51 -2.817 -4.319 -0.613 -2.698 0.000 0.000 0.000 0.000 IR 146 146 6 146 3 1 1 32 51 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 27 ] - 40 - C - - MR 147 146 6 149 5 1 1 30 49 -6.904 -0.045 -6.719 -6.932 -7.823 -1.225 1.449 -2.026 -0.746 D 148 146 6 149 5 0 0 29 48 -5.352 -0.707 -2.978 -4.409 -2.404 IR 149 149 3 149 5 1 1 31 50 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 28 ] 25 39 A U - - MP 150 149 3 154 6 2 2 29 48 -9.021 -8.961 -0.022 -7.737 -8.017 -8.412 -3.455 -2.578 -3.494 3.056 -3.668 -4.707 0.612 -3.555 -3.404 1.445 -3.934 -0.115 0.192 -3.949 -1.332 -2.351 ML 151 149 3 154 6 1 1 28 47 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 152 149 3 154 6 1 1 28 47 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 153 149 3 154 6 0 0 26 45 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 154 154 5 154 6 1 1 29 48 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 155 155 6 155 5 1 1 29 48 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 29 ] 26 38 A U - - MP 156 155 6 160 6 2 2 27 46 -9.021 -8.961 -0.022 -7.737 -8.017 -8.412 -3.455 -2.578 -3.494 3.056 -3.668 -4.707 0.612 -3.555 -3.404 1.445 -3.934 -0.115 0.192 -3.949 -1.332 -2.351 ML 157 155 6 160 6 1 1 27 46 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 158 155 6 160 6 1 1 27 46 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 159 155 6 160 6 0 0 25 44 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 160 160 5 160 6 1 1 27 46 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 161 161 6 161 5 1 1 27 46 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 30 ] 27 37 C G - - MP 162 161 6 166 4 2 2 25 44 -6.710 -6.917 -0.063 -5.331 -4.118 -3.981 -3.878 -0.258 -2.699 -4.345 3.391 -3.464 -3.916 0.056 -4.220 -1.924 0.854 -4.214 -0.398 -2.772 ML 163 161 6 166 4 1 1 26 45 -3.758 -3.940 -0.507 -2.670 0.368 -0.385 -0.191 0.094 MR 164 161 6 166 4 1 1 26 45 -4.809 -3.838 -1.706 -0.766 0.368 -0.385 -0.191 0.094 D 165 161 6 166 4 0 0 24 44 -4.568 -4.250 -2.265 -0.520 IL 166 166 5 166 4 1 1 27 47 -1.686 -2.369 -1.117 -4.855 0.000 0.000 0.000 0.000 IR 167 167 6 167 3 1 1 26 45 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 31 ] 28 - A - - - ML 168 167 6 170 3 1 1 23 41 -7.745 -0.024 -6.399 1.605 -1.935 -1.611 -1.438 D 169 167 6 170 3 0 0 21 40 -6.174 -1.687 -0.566 IL 170 170 3 170 3 1 1 25 44 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 32 ] 29 - A - - - ML 171 170 3 173 3 1 1 21 40 -7.745 -0.024 -6.399 1.605 -1.935 -1.611 -1.438 D 172 170 3 173 3 0 0 20 39 -6.174 -1.687 -0.566 IL 173 173 3 173 3 1 1 24 43 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 33 ] 30 - A - - - ML 174 173 3 176 3 1 1 20 39 -7.745 -0.024 -6.399 1.605 -1.935 -1.611 -1.438 D 175 173 3 176 3 0 0 19 38 -6.174 -1.687 -0.566 IL 176 176 3 176 3 1 1 23 42 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 34 ] 31 - U - - - ML 177 176 3 179 3 1 1 19 38 -7.745 -0.024 -6.399 -1.093 -1.161 -1.803 1.484 D 178 176 3 179 3 0 0 18 37 -6.174 -1.687 -0.566 IL 179 179 3 179 3 1 1 22 41 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 35 ] 32 - G - - - ML 180 179 3 182 3 1 1 18 36 -7.745 -0.024 -6.399 -1.113 -2.253 1.588 -1.638 D 181 179 3 182 3 0 0 17 36 -6.174 -1.687 -0.566 IL 182 182 3 182 3 1 1 21 40 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 36 ] 33 - a - - - ML 183 182 3 185 3 1 1 16 35 -7.745 -0.024 -6.399 0.660 -1.215 0.420 -0.621 D 184 182 3 185 3 0 0 16 34 -6.174 -1.687 -0.566 IL 185 185 3 185 3 1 1 20 38 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 37 ] 34 - A - - - ML 186 185 3 188 3 1 1 15 33 -7.745 -0.024 -6.399 1.605 -1.935 -1.611 -1.438 D 187 185 3 188 3 0 0 15 33 -6.174 -1.687 -0.566 IL 188 188 3 188 3 1 1 19 37 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 38 ] 35 - A - - - ML 189 188 3 191 3 1 1 13 32 -7.745 -0.024 -6.399 1.605 -1.935 -1.611 -1.438 D 190 188 3 191 3 0 0 13 32 -6.174 -1.687 -0.566 IL 191 191 3 191 3 1 1 18 36 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 39 ] 36 - A - - - ML 192 191 3 194 2 1 1 1 1 * 0.000 1.605 -1.935 -1.611 -1.438 D 193 191 3 194 2 0 0 0 0 * 0.000 IL 194 194 3 194 2 1 1 13 28 -1.823 -0.479 0.000 0.000 0.000 0.000 [ END 40 ] - - - - - - E 195 194 3 -1 0 0 0 0 0 // HMMER3/f [3.4 | Aug 2023] NAME mir-7615 ACC RF03730 DESC mir-7615 microRNA precursor family LENG 64 MAXL 152 ALPH RNA RF no MM no CONS yes CS yes MAP yes DATE Thu Jul 4 18:29:42 2024 COM [1] /hps/software/users/agb/rfam/bin/cmbuild -F CM SEED COM [2] /hps/software/users/agb/rfam/bin/cmcalibrate --cpu 8 /nfs/production/agb/rfam/15/rescan/families/RF03730/CM NSEQ 2 EFFN 1.886719 CKSUM 668421493 STATS LOCAL MSV -8.2062 0.72389 STATS LOCAL VITERBI -9.1161 0.72389 STATS LOCAL FORWARD -3.2391 0.72389 HMM A C G U m->m m->i m->d i->m i->i d->m d->d COMPO 1.26479 1.50253 1.39120 1.40097 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 0.00000 * 1 0.45193 2.49870 1.63907 2.43901 1 A - - < 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 2 2.43490 2.99554 0.21144 2.93812 2 G - - < 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 3 0.45096 2.50131 1.63932 2.44305 3 A - - < 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 4 2.72270 1.72468 2.44412 0.40157 4 U - - < 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 5 2.96315 0.30478 2.70857 1.93498 5 C - - < 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 6 2.72259 1.72468 2.44408 0.40158 6 U - - < 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 7 0.45092 2.50143 1.63933 2.44323 7 A - - < 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 8 2.56583 0.26796 3.13599 2.16501 8 C - - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 9 0.45084 2.50164 1.63935 2.44356 9 A - - < 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 10 2.96428 0.30462 2.70906 1.93517 10 C - - < 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 11 2.72760 1.46850 2.48837 0.47593 11 U - - < 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 12 2.96388 0.30468 2.70889 1.93510 12 C - - < 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 13 2.72294 1.72469 2.44421 0.40153 13 U - - < 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 14 2.43683 2.99757 0.21092 2.94103 14 G - - < 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 15 0.45093 2.50139 1.63933 2.44317 15 A - - < 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 16 0.19977 3.00736 2.75453 2.68797 16 A - - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 17 2.96327 0.30476 2.70862 1.93500 17 C - - < 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 18 2.72358 1.72470 2.44446 0.40143 18 U - - < 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 19 2.72756 1.46850 2.48836 0.47593 19 U - - < 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 20 2.96384 0.30468 2.70887 1.93510 20 C - - < 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 21 2.72292 1.72468 2.44421 0.40153 21 U - - < 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 22 0.45089 2.50150 1.63934 2.44335 22 A - - < 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 23 2.96234 0.30489 2.70822 1.93485 23 C - - < 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 24 2.72187 1.72466 2.44380 0.40169 24 U - - < 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 25 0.45351 2.49444 1.63866 2.43242 25 A - - < 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 26 0.45216 2.49806 1.63901 2.43802 26 A - - < 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 27 2.95599 0.30580 2.70544 1.93382 27 C - - < 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 28 0.19977 3.00736 2.75453 2.68797 28 A - - _ 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 29 0.19977 3.00736 2.75453 2.68797 29 A - - _ 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 30 0.19977 3.00736 2.75453 2.68797 30 A - - _ 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 31 2.39528 2.39643 2.90274 0.27058 31 U - - _ 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 32 2.45778 3.29975 0.19718 2.87457 32 G - - _ 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 33 0.89864 2.34409 1.04225 1.93599 33 a - - _ 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 34 0.19977 3.00736 2.75453 2.68797 34 A - - _ 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 35 0.19977 3.00736 2.75453 2.68797 35 A - - _ 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 36 0.19977 3.00736 2.75453 2.68797 36 A - - _ 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 37 2.20953 2.87526 0.26394 2.72075 37 G - - > 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 38 2.67318 1.90719 2.31608 0.38008 38 U - - > 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 39 2.67401 1.90725 2.31635 0.37994 39 U - - > 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 40 2.56583 0.26796 3.13599 2.16501 40 C - - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 41 0.45670 2.62299 1.56146 2.47437 41 A - - > 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 42 2.20900 2.87461 0.26413 2.71992 42 G - - > 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 43 2.67161 1.90706 2.31555 0.38034 43 U - - > 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 44 0.45669 2.62304 1.56147 2.47443 44 A - - > 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 45 2.20866 2.87418 0.26426 2.71937 45 G - - > 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 46 1.97845 2.65979 0.34609 2.47328 46 G - - > 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 47 0.45740 2.62066 1.56140 2.47128 47 A - - > 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 48 2.20273 2.86687 0.26646 2.71006 48 G - - > 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 49 2.67155 1.90706 2.31553 0.38035 49 U - - > 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 50 3.15107 0.24790 2.82809 2.14020 50 C - - > 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 51 0.45668 2.62305 1.56147 2.47445 51 A - - > 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 52 2.20868 2.87422 0.26425 2.71942 52 G - - > 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 53 1.97847 2.65983 0.34608 2.47332 53 G - - > 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 54 2.20622 2.87117 0.26516 2.71554 54 G - - > 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 55 2.65988 1.90613 2.31164 0.38230 55 U - - > 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 56 2.67228 1.90712 2.31578 0.38022 56 U - - > 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 57 0.45651 2.62364 1.56148 2.47523 57 A - - > 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 58 2.21004 2.87589 0.26375 2.72155 58 G - - > 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 59 0.45631 2.62431 1.56150 2.47611 59 A - - > 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 60 2.67534 1.90736 2.31679 0.37972 60 U - - > 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 61 3.16000 0.24688 2.83178 2.14193 61 C - - > 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 62 2.67830 1.90759 2.31777 0.37923 62 U - - > 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 63 2.56583 0.26796 3.13599 2.16501 63 C - - : 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 64 2.45778 3.29975 0.19718 2.87457 64 G - - : 1.38629 1.38629 1.38629 1.38629 0.02469 3.71357 * 1.46634 0.26236 0.00000 * //