INFERNAL1/a [1.1.5 | Sep 2023] NAME mir-1537 ACC RF03638 DESC mir-1537 microRNA precursor family STATES 187 NODES 40 CLEN 61 W 76 ALPH RNA RF no CONS yes MAP yes DATE Sun Jul 7 02:45:46 2024 COM [1] /hps/software/users/agb/rfam/bin/cmbuild -F CM SEED COM [2] /hps/software/users/agb/rfam/bin/cmcalibrate --cpu 8 /nfs/production/agb/rfam/15/rescan/families/RF03638/CM PBEGIN 0.05 PEND 0.05 WBETA 1e-07 QDBBETA1 1e-07 QDBBETA2 1e-15 N2OMEGA 1.52588e-05 N3OMEGA 1.52588e-05 ELSELF -0.08926734 NSEQ 2 EFFN 1.582031 CKSUM 2883138276 NULL 0.000 0.000 0.000 0.000 GA 63.00 TC 63.30 NC 60.00 EFP7GF -6.4651 0.72650 ECMLC 0.65340 -4.71056 3.94450 1600000 342921 0.003499 ECMGC 0.43440 -16.00726 -1.68226 1600000 201636 0.001984 ECMLI 0.63594 -3.63695 4.98196 1600000 288127 0.004165 ECMGI 0.49013 -10.63977 1.13191 1600000 128171 0.003121 CM [ ROOT 0 ] - - - - - - S 0 -1 0 1 6 1 1 76 95 -9.052 -8.991 -0.022 -7.768 -8.048 -8.443 IL 1 1 2 1 6 1 2 78 97 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 2 2 3 2 5 1 2 77 97 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 1 ] 1 61 A U - - MP 3 2 3 7 6 2 5 76 95 -9.052 -8.991 -0.022 -7.768 -8.048 -8.443 -3.571 -2.661 -3.604 3.166 -3.834 -4.879 0.452 -3.659 -3.506 1.317 -4.043 -0.176 0.033 -4.103 -1.490 -2.452 ML 4 2 3 7 6 1 1 75 94 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 5 2 3 7 6 1 1 75 94 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 6 2 3 7 6 0 0 72 92 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 7 7 5 7 6 1 1 76 95 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 8 8 6 8 5 1 2 75 95 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 2 ] 2 60 C G - - MP 9 8 6 13 6 2 5 74 93 -9.052 -8.991 -0.022 -7.768 -8.048 -8.443 -4.273 -4.153 -4.008 -0.412 -2.790 -4.456 3.455 -3.572 -4.050 -0.128 -4.339 -2.097 0.750 -4.360 -0.492 -2.900 ML 10 8 6 13 6 1 1 73 92 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 11 8 6 13 6 1 1 73 92 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 12 8 6 13 6 0 0 70 90 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 13 13 5 13 6 1 1 74 93 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 14 14 6 14 5 1 1 73 93 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 3 ] 3 59 A U - - MP 15 14 6 19 6 2 5 72 91 -9.052 -8.991 -0.022 -7.768 -8.048 -8.443 -3.571 -2.661 -3.604 3.166 -3.834 -4.879 0.452 -3.659 -3.506 1.317 -4.043 -0.176 0.033 -4.103 -1.490 -2.452 ML 16 14 6 19 6 1 1 71 90 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 17 14 6 19 6 1 1 71 90 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 18 14 6 19 6 0 0 68 88 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 19 19 5 19 6 1 1 72 91 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 20 20 6 20 5 1 1 71 91 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 4 ] 4 58 g u - - MP 21 20 6 25 6 2 4 70 89 -9.052 -8.991 -0.022 -7.768 -8.048 -8.443 -3.445 -2.283 -3.596 1.233 -4.171 -4.901 0.189 -3.644 -3.308 1.589 -3.820 2.876 -0.173 -4.142 -1.752 -2.335 ML 22 20 6 25 6 1 1 69 88 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 23 20 6 25 6 1 1 68 88 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 24 20 6 25 6 0 0 66 86 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 25 25 5 25 6 1 1 70 89 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 26 26 6 26 5 1 1 69 89 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 5 ] 5 57 C G - - MP 27 26 6 31 6 2 4 68 87 -9.052 -8.991 -0.022 -7.768 -8.048 -8.443 -4.273 -4.153 -4.008 -0.412 -2.790 -4.456 3.455 -3.572 -4.050 -0.128 -4.339 -2.097 0.750 -4.360 -0.492 -2.900 ML 28 26 6 31 6 1 1 67 86 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 29 26 6 31 6 1 1 66 86 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 30 26 6 31 6 0 0 64 84 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 31 31 5 31 6 1 1 68 87 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 32 32 6 32 5 1 1 67 87 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 6 ] 6 56 U A - - MP 33 32 6 37 6 2 4 66 85 -9.052 -8.991 -0.022 -7.768 -8.048 -8.443 -3.910 -3.725 -3.778 -0.041 -2.783 -4.368 1.538 -3.458 -3.786 0.259 -4.173 -1.632 3.175 -4.071 -0.466 -2.637 ML 34 32 6 37 6 1 1 65 84 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 35 32 6 37 6 1 1 64 84 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 36 32 6 37 6 0 0 62 82 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 37 37 5 37 6 1 1 66 85 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 38 38 6 38 5 1 1 65 85 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 7 ] 7 55 G C - - MP 39 38 6 43 6 2 4 64 83 -9.052 -8.991 -0.022 -7.768 -8.048 -8.443 -4.475 -2.968 -4.553 0.375 -4.856 -4.587 -0.286 -4.774 -4.148 3.567 -4.505 -0.658 -0.679 -4.291 -2.310 -3.434 ML 40 38 6 43 6 1 1 63 82 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 41 38 6 43 6 1 1 62 82 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 42 38 6 43 6 0 0 60 80 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 43 43 5 43 6 1 1 64 83 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 44 44 6 44 5 1 1 63 83 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 8 ] 8 54 U A - - MP 45 44 6 49 6 2 3 62 81 -9.052 -8.991 -0.022 -7.768 -8.048 -8.443 -3.910 -3.725 -3.778 -0.041 -2.783 -4.368 1.538 -3.458 -3.786 0.259 -4.173 -1.632 3.175 -4.071 -0.466 -2.637 ML 46 44 6 49 6 1 1 61 80 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 47 44 6 49 6 1 1 60 80 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 48 44 6 49 6 0 0 58 78 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 49 49 5 49 6 1 1 62 81 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 50 50 6 50 5 1 1 61 81 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 9 ] 9 53 A U - - MP 51 50 6 55 6 2 3 60 79 -9.052 -8.991 -0.022 -7.768 -8.048 -8.443 -3.571 -2.661 -3.604 3.166 -3.834 -4.879 0.452 -3.659 -3.506 1.317 -4.043 -0.176 0.033 -4.103 -1.490 -2.452 ML 52 50 6 55 6 1 1 59 78 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 53 50 6 55 6 1 1 58 78 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 54 50 6 55 6 0 0 56 76 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 55 55 5 55 6 1 1 60 79 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 56 56 6 56 5 1 1 59 79 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 10 ] 10 52 A U - - MP 57 56 6 61 6 2 3 58 77 -9.052 -8.991 -0.022 -7.768 -8.048 -8.443 -3.571 -2.661 -3.604 3.166 -3.834 -4.879 0.452 -3.659 -3.506 1.317 -4.043 -0.176 0.033 -4.103 -1.490 -2.452 ML 58 56 6 61 6 1 1 57 76 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 59 56 6 61 6 1 1 56 76 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 60 56 6 61 6 0 0 54 74 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 61 61 5 61 6 1 1 58 77 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 62 62 6 62 5 1 1 57 77 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 11 ] 11 51 u a - - MP 63 62 6 67 6 2 3 56 75 -9.052 -8.991 -0.022 -7.768 -8.048 -8.443 -3.293 -3.261 -3.240 0.335 -2.359 -3.866 1.905 -3.019 -3.267 0.585 -3.690 -1.345 2.242 -3.473 1.669 -2.193 ML 64 62 6 67 6 1 1 55 74 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 65 62 6 67 6 1 1 55 74 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 66 62 6 67 6 0 0 52 72 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 67 67 5 67 6 1 1 56 75 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 68 68 6 68 5 1 1 55 75 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 12 ] 12 50 U A - - MP 69 68 6 73 6 2 2 54 73 -9.052 -8.991 -0.022 -7.768 -8.048 -8.443 -3.910 -3.725 -3.778 -0.041 -2.783 -4.368 1.538 -3.458 -3.786 0.259 -4.173 -1.632 3.175 -4.071 -0.466 -2.637 ML 70 68 6 73 6 1 1 53 72 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 71 68 6 73 6 1 1 53 72 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 72 68 6 73 6 0 0 51 70 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 73 73 5 73 6 1 1 54 73 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 74 74 6 74 5 1 1 53 73 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 13 ] 13 49 A U - - MP 75 74 6 79 6 2 2 52 71 -9.052 -8.991 -0.022 -7.768 -8.048 -8.443 -3.571 -2.661 -3.604 3.166 -3.834 -4.879 0.452 -3.659 -3.506 1.317 -4.043 -0.176 0.033 -4.103 -1.490 -2.452 ML 76 74 6 79 6 1 1 51 71 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 77 74 6 79 6 1 1 51 71 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 78 74 6 79 6 0 0 49 69 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 79 79 5 79 6 1 1 52 71 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 80 80 6 80 5 1 1 52 71 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 14 ] 14 48 G C - - MP 81 80 6 85 4 2 2 50 69 -6.798 -7.005 -0.059 -5.419 -4.475 -2.968 -4.553 0.375 -4.856 -4.587 -0.286 -4.774 -4.148 3.567 -4.505 -0.658 -0.679 -4.291 -2.310 -3.434 ML 82 80 6 85 4 1 1 51 70 -3.758 -3.940 -0.507 -2.670 0.368 -0.385 -0.191 0.094 MR 83 80 6 85 4 1 1 50 70 -4.809 -3.838 -1.706 -0.766 0.368 -0.385 -0.191 0.094 D 84 80 6 85 4 0 0 49 69 -4.568 -4.250 -2.265 -0.520 IL 85 85 5 85 4 1 1 52 71 -1.686 -2.369 -1.117 -4.855 0.000 0.000 0.000 0.000 IR 86 86 6 86 3 1 1 51 70 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 15 ] 15 - U - - - ML 87 86 6 89 3 1 1 48 67 -7.826 -0.023 -6.480 -1.234 -1.276 -1.954 1.538 D 88 86 6 89 3 0 0 46 66 -6.174 -1.687 -0.566 IL 89 89 3 89 3 1 1 50 69 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 16 ] 16 - C - - - ML 90 89 3 92 3 1 1 46 66 -7.826 -0.023 -6.480 -1.410 1.521 -2.221 -0.892 D 91 89 3 92 3 0 0 45 64 -6.174 -1.687 -0.566 IL 92 92 3 92 3 1 1 49 68 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 17 ] 17 - A - - - ML 93 92 3 95 3 1 1 45 64 -8.226 -0.020 -6.543 1.652 -2.094 -1.754 -1.610 D 94 92 3 95 3 0 0 44 63 -5.620 -0.734 -1.403 IL 95 95 3 95 3 1 1 46 65 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 18 ] - 47 - U - - MR 96 95 3 98 3 1 1 44 63 -8.226 -0.020 -6.543 -1.234 -1.276 -1.954 1.538 D 97 95 3 98 3 0 0 43 62 -6.390 -1.568 -0.620 IR 98 98 3 98 3 1 1 45 64 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 19 ] - 46 - G - - MR 99 98 3 101 3 1 1 43 62 -8.226 -0.020 -6.543 -1.284 -2.455 1.645 -1.840 D 100 98 3 101 3 0 0 42 61 -6.390 -1.568 -0.620 IR 101 101 3 101 3 1 1 44 63 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 20 ] - 45 - u - - MR 102 101 3 104 5 1 1 42 61 -6.973 -0.042 -6.789 -7.001 -7.892 -0.597 0.408 -1.361 0.699 D 103 101 3 104 5 0 0 41 60 -5.352 -0.707 -2.978 -4.409 -2.404 IR 104 104 3 104 5 1 1 43 62 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 21 ] 18 44 G C - - MP 105 104 3 109 6 2 2 41 60 -9.052 -8.991 -0.022 -7.768 -8.048 -8.443 -4.475 -2.968 -4.553 0.375 -4.856 -4.587 -0.286 -4.774 -4.148 3.567 -4.505 -0.658 -0.679 -4.291 -2.310 -3.434 ML 106 104 3 109 6 1 1 40 59 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 107 104 3 109 6 1 1 40 59 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 108 104 3 109 6 0 0 37 56 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 109 109 5 109 6 1 1 41 60 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 110 110 6 110 5 1 1 41 60 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 22 ] 19 43 U A - - MP 111 110 6 115 6 2 2 39 58 -9.052 -8.991 -0.022 -7.768 -8.048 -8.443 -3.910 -3.725 -3.778 -0.041 -2.783 -4.368 1.538 -3.458 -3.786 0.259 -4.173 -1.632 3.175 -4.071 -0.466 -2.637 ML 112 110 6 115 6 1 1 38 57 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 113 110 6 115 6 1 1 38 57 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 114 110 6 115 6 0 0 35 54 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 115 115 5 115 6 1 1 39 58 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 116 116 6 116 5 1 1 39 58 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 23 ] 20 42 U A - - MP 117 116 6 121 6 2 2 37 56 -9.052 -8.991 -0.022 -7.768 -8.048 -8.443 -3.910 -3.725 -3.778 -0.041 -2.783 -4.368 1.538 -3.458 -3.786 0.259 -4.173 -1.632 3.175 -4.071 -0.466 -2.637 ML 118 116 6 121 6 1 1 36 55 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 119 116 6 121 6 1 1 36 55 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 120 116 6 121 6 0 0 33 52 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 121 121 5 121 6 1 1 37 56 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 122 122 6 122 5 1 1 37 56 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 24 ] 21 41 U A - - MP 123 122 6 127 6 2 2 35 54 -9.052 -8.991 -0.022 -7.768 -8.048 -8.443 -3.910 -3.725 -3.778 -0.041 -2.783 -4.368 1.538 -3.458 -3.786 0.259 -4.173 -1.632 3.175 -4.071 -0.466 -2.637 ML 124 122 6 127 6 1 1 34 53 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 125 122 6 127 6 1 1 34 53 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 126 122 6 127 6 0 0 31 50 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 127 127 5 127 6 1 1 35 54 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 128 128 6 128 5 1 1 35 54 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 25 ] 22 40 U A - - MP 129 128 6 133 6 2 2 33 52 -9.052 -8.991 -0.022 -7.768 -8.048 -8.443 -3.910 -3.725 -3.778 -0.041 -2.783 -4.368 1.538 -3.458 -3.786 0.259 -4.173 -1.632 3.175 -4.071 -0.466 -2.637 ML 130 128 6 133 6 1 1 32 51 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 131 128 6 133 6 1 1 32 51 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 132 128 6 133 6 0 0 29 48 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 133 133 5 133 6 1 1 33 52 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 134 134 6 134 5 1 1 33 52 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 26 ] 23 39 C G - - MP 135 134 6 139 6 2 2 31 50 -9.052 -8.991 -0.022 -7.768 -8.048 -8.443 -4.273 -4.153 -4.008 -0.412 -2.790 -4.456 3.455 -3.572 -4.050 -0.128 -4.339 -2.097 0.750 -4.360 -0.492 -2.900 ML 136 134 6 139 6 1 1 30 49 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 137 134 6 139 6 1 1 30 49 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 138 134 6 139 6 0 0 27 47 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 139 139 5 139 6 1 1 31 50 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 140 140 6 140 5 1 1 31 50 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 27 ] 24 38 U A - - MP 141 140 6 145 6 2 2 29 48 -9.052 -8.991 -0.022 -7.768 -8.048 -8.443 -3.910 -3.725 -3.778 -0.041 -2.783 -4.368 1.538 -3.458 -3.786 0.259 -4.173 -1.632 3.175 -4.071 -0.466 -2.637 ML 142 140 6 145 6 1 1 28 47 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 143 140 6 145 6 1 1 28 47 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 144 140 6 145 6 0 0 26 45 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 145 145 5 145 6 1 1 29 48 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 146 146 6 146 5 1 1 29 48 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 28 ] 25 37 G C - - MP 147 146 6 151 6 2 2 27 46 -9.052 -8.991 -0.022 -7.768 -8.048 -8.443 -4.475 -2.968 -4.553 0.375 -4.856 -4.587 -0.286 -4.774 -4.148 3.567 -4.505 -0.658 -0.679 -4.291 -2.310 -3.434 ML 148 146 6 151 6 1 1 27 46 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 149 146 6 151 6 1 1 26 46 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 150 146 6 151 6 0 0 25 44 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 151 151 5 151 6 1 1 27 46 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 152 152 6 152 5 1 1 27 46 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 29 ] 26 36 U A - - MP 153 152 6 157 4 2 2 25 44 -6.798 -7.005 -0.059 -5.419 -3.910 -3.725 -3.778 -0.041 -2.783 -4.368 1.538 -3.458 -3.786 0.259 -4.173 -1.632 3.175 -4.071 -0.466 -2.637 ML 154 152 6 157 4 1 1 26 45 -3.758 -3.940 -0.507 -2.670 0.368 -0.385 -0.191 0.094 MR 155 152 6 157 4 1 1 25 45 -4.809 -3.838 -1.706 -0.766 0.368 -0.385 -0.191 0.094 D 156 152 6 157 4 0 0 24 44 -4.568 -4.250 -2.265 -0.520 IL 157 157 5 157 4 1 1 27 46 -1.686 -2.369 -1.117 -4.855 0.000 0.000 0.000 0.000 IR 158 158 6 158 3 1 1 26 45 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 30 ] 27 - C - - - ML 159 158 6 161 3 1 1 22 41 -7.826 -0.023 -6.480 -1.410 1.521 -2.221 -0.892 D 160 158 6 161 3 0 0 21 40 -6.174 -1.687 -0.566 IL 161 161 3 161 3 1 1 25 44 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 31 ] 28 - C - - - ML 162 161 3 164 3 1 1 21 40 -7.826 -0.023 -6.480 -1.410 1.521 -2.221 -0.892 D 163 161 3 164 3 0 0 20 39 -6.174 -1.687 -0.566 IL 164 164 3 164 3 1 1 24 43 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 32 ] 29 - U - - - ML 165 164 3 167 3 1 1 20 39 -7.826 -0.023 -6.480 -1.234 -1.276 -1.954 1.538 D 166 164 3 167 3 0 0 19 38 -6.174 -1.687 -0.566 IL 167 167 3 167 3 1 1 23 42 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 33 ] 30 - G - - - ML 168 167 3 170 3 1 1 19 38 -7.826 -0.023 -6.480 -1.284 -2.455 1.645 -1.840 D 169 167 3 170 3 0 0 18 37 -6.174 -1.687 -0.566 IL 170 170 3 170 3 1 1 22 41 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 34 ] 31 - U - - - ML 171 170 3 173 3 1 1 18 36 -7.826 -0.023 -6.480 -1.234 -1.276 -1.954 1.538 D 172 170 3 173 3 0 0 17 36 -6.174 -1.687 -0.566 IL 173 173 3 173 3 1 1 21 40 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 35 ] 32 - C - - - ML 174 173 3 176 3 1 1 16 35 -7.826 -0.023 -6.480 -1.410 1.521 -2.221 -0.892 D 175 173 3 176 3 0 0 16 34 -6.174 -1.687 -0.566 IL 176 176 3 176 3 1 1 20 38 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 36 ] 33 - C - - - ML 177 176 3 179 3 1 1 15 33 -7.826 -0.023 -6.480 -1.410 1.521 -2.221 -0.892 D 178 176 3 179 3 0 0 15 33 -6.174 -1.687 -0.566 IL 179 179 3 179 3 1 1 19 37 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 37 ] 34 - A - - - ML 180 179 3 182 3 1 1 13 32 -7.826 -0.023 -6.480 1.652 -2.094 -1.754 -1.610 D 181 179 3 182 3 0 0 13 32 -6.174 -1.687 -0.566 IL 182 182 3 182 3 1 1 18 36 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 38 ] 35 - C - - - ML 183 182 3 185 2 1 1 1 1 * 0.000 -1.410 1.521 -2.221 -0.892 D 184 182 3 185 2 0 0 0 0 * 0.000 IL 185 185 3 185 2 1 1 13 28 -1.823 -0.479 0.000 0.000 0.000 0.000 [ END 39 ] - - - - - - E 186 185 3 -1 0 0 0 0 0 // HMMER3/f [3.4 | Aug 2023] NAME mir-1537 ACC RF03638 DESC mir-1537 microRNA precursor family LENG 61 MAXL 148 ALPH RNA RF no MM no CONS yes CS yes MAP yes DATE Sun Jul 7 02:45:46 2024 COM [1] /hps/software/users/agb/rfam/bin/cmbuild -F CM SEED COM [2] /hps/software/users/agb/rfam/bin/cmcalibrate --cpu 8 /nfs/production/agb/rfam/15/rescan/families/RF03638/CM NSEQ 2 EFFN 1.871094 CKSUM 2883138276 STATS LOCAL MSV -8.4209 0.72650 STATS LOCAL VITERBI -9.2620 0.72650 STATS LOCAL FORWARD -3.3379 0.72650 HMM A C G U m->m m->i m->d i->m i->i d->m d->d COMPO 1.44645 1.38967 1.47488 1.24955 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 0.00000 * 1 0.45198 2.50126 1.63358 2.44852 1 A - - < 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 2 2.97722 0.30426 2.70882 1.93255 2 C - - < 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 3 0.45395 2.49594 1.63309 2.44021 3 A - - < 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 4 1.81900 2.65442 0.37267 2.54366 4 G - - < 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 5 2.96164 0.30644 2.70211 1.93007 5 C - - < 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 6 2.71781 1.71884 2.43599 0.40467 6 U - - < 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 7 2.43322 2.99041 0.21215 2.93484 7 G - - < 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 8 2.71576 1.71880 2.43520 0.40499 8 U - - < 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 9 0.45523 2.49251 1.63278 2.43488 9 A - - < 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 10 0.45530 2.49232 1.63276 2.43458 10 A - - < 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 11 2.37323 1.39969 2.12989 0.61379 11 U - - < 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 12 2.71370 1.71876 2.43440 0.40531 12 U - - < 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 13 0.45544 2.49195 1.63273 2.43400 13 A - - < 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 14 2.43081 2.98788 0.21281 2.93122 14 G - - < 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 15 2.38759 2.39010 2.89464 0.27285 15 U - - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 16 2.55571 0.27079 3.12553 2.15697 16 C - - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 17 0.20164 2.99894 2.74695 2.67874 17 A - - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 18 2.42998 2.98701 0.21304 2.92998 18 G - - < 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 19 2.71488 1.71878 2.43486 0.40513 19 U - - < 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 20 2.71579 1.71880 2.43521 0.40498 20 U - - < 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 21 2.71581 1.71880 2.43522 0.40498 21 U - - < 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 22 2.71548 1.71879 2.43509 0.40503 22 U - - < 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 23 2.95576 0.30727 2.69956 1.92913 23 C - - < 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 24 2.71458 1.71878 2.43474 0.40517 24 U - - < 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 25 2.43150 2.98861 0.21262 2.93226 25 G - - < 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 26 2.71380 1.71877 2.43444 0.40529 26 U - - < 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 27 2.55571 0.27079 3.12553 2.15697 27 C - - _ 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 28 2.55571 0.27079 3.12553 2.15697 28 C - - _ 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 29 2.38759 2.39010 2.89464 0.27285 29 U - - _ 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 30 2.44884 3.28939 0.19931 2.86416 30 G - - _ 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 31 2.38759 2.39010 2.89464 0.27285 31 U - - _ 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 32 2.55571 0.27079 3.12553 2.15697 32 C - - _ 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 33 2.55571 0.27079 3.12553 2.15697 33 C - - _ 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 34 0.20164 2.99894 2.74695 2.67874 34 A - - _ 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 35 2.55571 0.27079 3.12553 2.15697 35 C - - _ 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 36 0.46081 2.61361 1.55556 2.46645 36 A - - > 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 37 3.14397 0.24968 2.81960 2.13531 37 C - - > 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 38 0.46068 2.61405 1.55557 2.46703 38 A - - > 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 39 2.20401 2.86655 0.26601 2.71339 39 G - - > 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 40 0.46048 2.61470 1.55558 2.46791 40 A - - > 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 41 0.46034 2.61515 1.55559 2.46850 41 A - - > 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 42 0.46017 2.61571 1.55561 2.46924 42 A - - > 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 43 0.45996 2.61641 1.55562 2.47017 43 A - - > 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 44 3.15809 0.24805 2.82539 2.13804 44 C - - > 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 45 1.86302 1.07179 2.40075 0.88733 45 u - - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 46 2.44884 3.28939 0.19931 2.86416 46 G - - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 47 2.38759 2.39010 2.89464 0.27285 47 U - - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 48 3.14183 0.24993 2.81871 2.13490 48 C - - > 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 49 2.66260 1.89955 2.30630 0.38424 49 U - - > 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 50 0.46083 2.61355 1.55556 2.46637 50 A - - > 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 51 1.10373 2.29344 0.79689 2.14797 51 g - - > 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 52 2.66388 1.89964 2.30672 0.38403 52 U - - > 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 53 2.66452 1.89969 2.30694 0.38392 53 U - - > 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 54 0.46050 2.61461 1.55558 2.46779 54 A - - > 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 55 3.14910 0.24908 2.82171 2.13631 55 C - - > 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 56 0.46018 2.61569 1.55561 2.46922 56 A - - > 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 57 2.20661 2.86974 0.26505 2.71747 57 G - - > 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 58 2.76444 1.70808 2.45863 0.40015 58 U - - > 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 59 2.67601 1.90057 2.31072 0.38201 59 U - - > 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 60 2.21299 2.87760 0.26269 2.72753 60 G - - > 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 61 2.69081 1.90169 2.31554 0.37958 61 U - - > 1.38629 1.38629 1.38629 1.38629 0.02469 3.71357 * 1.46634 0.26236 0.00000 * //