INFERNAL1/a [1.1.5 | Sep 2023] NAME mir-7147 ACC RF03611 DESC mir-7147 microRNA precursor family STATES 178 NODES 40 CLEN 58 W 74 ALPH RNA RF no CONS yes MAP yes DATE Thu Jul 4 14:22:07 2024 COM [1] /hps/software/users/agb/rfam/bin/cmbuild -F CM SEED COM [2] /hps/software/users/agb/rfam/bin/cmcalibrate --cpu 8 /nfs/production/agb/rfam/15/rescan/families/RF03611/CM PBEGIN 0.05 PEND 0.05 WBETA 1e-07 QDBBETA1 1e-07 QDBBETA2 1e-15 N2OMEGA 1.52588e-05 N3OMEGA 1.52588e-05 ELSELF -0.08926734 NSEQ 2 EFFN 1.605469 CKSUM 1956950561 NULL 0.000 0.000 0.000 0.000 GA 90.00 TC 93.30 NC 89.10 EFP7GF -5.9847 0.72649 ECMLC 0.64486 -5.74474 3.42769 1600000 444642 0.002699 ECMGC 0.47347 -15.65236 -2.90608 1600000 167110 0.002394 ECMLI 0.64897 -3.99412 4.43288 1600000 284629 0.004216 ECMGI 0.51818 -10.86499 -0.08839 1600000 106473 0.003757 CM [ ROOT 0 ] - - - - - - S 0 -1 0 1 4 1 1 74 93 -6.809 -7.016 -0.059 -5.430 IL 1 1 2 1 4 1 11 78 98 -1.686 -2.369 -1.117 -4.855 0.000 0.000 0.000 0.000 IR 2 2 3 2 3 1 10 77 97 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 1 ] 1 - U - - - ML 3 2 3 5 3 1 10 74 93 -8.235 -0.020 -6.552 -1.252 -1.290 -1.972 1.544 D 4 2 3 5 3 0 5 73 92 -5.620 -0.734 -1.403 IL 5 5 3 5 3 1 9 75 94 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 2 ] - 58 - C - - MR 6 5 3 8 3 1 9 73 92 -8.235 -0.020 -6.552 -1.433 1.529 -2.245 -0.911 D 7 5 3 8 3 0 3 71 91 -6.390 -1.568 -0.620 IR 8 8 3 8 3 1 8 74 93 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 3 ] - 57 - C - - MR 9 8 3 11 3 1 9 72 91 -8.235 -0.020 -6.552 -1.433 1.529 -2.245 -0.911 D 10 8 3 11 3 0 2 70 90 -6.390 -1.568 -0.620 IR 11 11 3 11 3 1 7 73 92 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 4 ] - 56 - C - - MR 12 11 3 14 5 1 9 71 90 -6.982 -0.042 -6.797 -7.009 -7.901 -1.433 1.529 -2.245 -0.911 D 13 11 3 14 5 0 2 69 89 -5.352 -0.707 -2.978 -4.409 -2.404 IR 14 14 3 14 5 1 6 71 91 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 5 ] 2 55 G C - - MP 15 14 3 19 6 2 9 70 89 -9.056 -8.995 -0.022 -7.772 -8.051 -8.447 -4.494 -2.977 -4.573 0.362 -4.883 -4.594 -0.308 -4.796 -4.161 3.573 -4.517 -0.668 -0.701 -4.304 -2.333 -3.454 ML 16 14 3 19 6 1 4 68 88 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 17 14 3 19 6 1 4 68 88 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 18 14 3 19 6 0 0 66 86 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 19 19 5 19 6 1 5 69 89 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 20 20 6 20 5 1 5 69 89 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 6 ] 3 54 u g - - MP 21 20 6 25 6 2 8 68 87 -9.056 -8.995 -0.022 -7.772 -8.051 -8.447 -3.832 -3.742 -3.594 -0.103 -2.435 -4.062 1.844 -3.182 -3.631 0.136 -3.951 -1.751 1.033 -3.942 2.821 -2.516 ML 22 20 6 25 6 1 3 66 86 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 23 20 6 25 6 1 3 66 86 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 24 20 6 25 6 0 0 64 84 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 25 25 5 25 6 1 4 67 87 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 26 26 6 26 5 1 4 67 87 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 7 ] 4 53 A U - - MP 27 26 6 31 6 2 6 66 85 -9.056 -8.995 -0.022 -7.772 -8.051 -8.447 -3.586 -2.672 -3.618 3.179 -3.856 -4.901 0.432 -3.672 -3.520 1.301 -4.057 -0.184 0.013 -4.122 -1.511 -2.465 ML 28 26 6 31 6 1 3 65 85 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 29 26 6 31 6 1 2 65 85 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 30 26 6 31 6 0 0 63 83 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 31 31 5 31 6 1 4 66 85 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 32 32 6 32 5 1 4 65 85 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 8 ] 5 52 C G - - MP 33 32 6 37 4 2 4 64 83 -6.809 -7.016 -0.059 -5.430 -4.293 -4.174 -4.025 -0.431 -2.802 -4.470 3.463 -3.586 -4.066 -0.151 -4.354 -2.119 0.737 -4.378 -0.503 -2.915 ML 34 32 6 37 4 1 2 64 84 -3.758 -3.940 -0.507 -2.670 0.368 -0.385 -0.191 0.094 MR 35 32 6 37 4 1 1 64 83 -4.809 -3.838 -1.706 -0.766 0.368 -0.385 -0.191 0.094 D 36 32 6 37 4 0 0 63 82 -4.568 -4.250 -2.265 -0.520 IL 37 37 5 37 4 1 3 65 85 -1.686 -2.369 -1.117 -4.855 0.000 0.000 0.000 0.000 IR 38 38 6 38 3 1 3 64 84 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 9 ] 6 - C - - - ML 39 38 6 41 3 1 3 61 81 -8.235 -0.020 -6.552 -1.433 1.529 -2.245 -0.911 D 40 38 6 41 3 0 0 60 80 -5.620 -0.734 -1.403 IL 41 41 3 41 3 1 2 62 82 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 10 ] - 51 - U - - MR 42 41 3 44 5 1 3 60 80 -6.982 -0.042 -6.797 -7.009 -7.901 -1.252 -1.290 -1.972 1.544 D 43 41 3 44 5 0 0 59 79 -5.352 -0.707 -2.978 -4.409 -2.404 IR 44 44 3 44 5 1 1 61 80 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 11 ] 7 50 A U - - MP 45 44 3 49 6 2 4 59 79 -9.056 -8.995 -0.022 -7.772 -8.051 -8.447 -3.586 -2.672 -3.618 3.179 -3.856 -4.901 0.432 -3.672 -3.520 1.301 -4.057 -0.184 0.013 -4.122 -1.511 -2.465 ML 46 44 3 49 6 1 1 58 77 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 47 44 3 49 6 1 1 58 77 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 48 44 3 49 6 0 0 55 75 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 49 49 5 49 6 1 1 59 79 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 50 50 6 50 5 1 1 59 78 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 12 ] 8 49 u g - - MP 51 50 6 55 6 2 4 57 77 -9.056 -8.995 -0.022 -7.772 -8.051 -8.447 -3.832 -3.742 -3.594 -0.103 -2.435 -4.062 1.844 -3.182 -3.631 0.136 -3.951 -1.751 1.033 -3.942 2.821 -2.516 ML 52 50 6 55 6 1 1 56 75 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 53 50 6 55 6 1 1 56 75 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 54 50 6 55 6 0 0 53 73 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 55 55 5 55 6 1 1 57 77 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 56 56 6 56 5 1 1 57 76 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 13 ] 9 48 G C - - MP 57 56 6 61 6 2 4 55 75 -9.056 -8.995 -0.022 -7.772 -8.051 -8.447 -4.494 -2.977 -4.573 0.362 -4.883 -4.594 -0.308 -4.796 -4.161 3.573 -4.517 -0.668 -0.701 -4.304 -2.333 -3.454 ML 58 56 6 61 6 1 1 54 73 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 59 56 6 61 6 1 1 54 73 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 60 56 6 61 6 0 0 51 71 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 61 61 5 61 6 1 1 55 75 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 62 62 6 62 5 1 1 55 74 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 14 ] 10 47 C G - - MP 63 62 6 67 6 2 3 53 73 -9.056 -8.995 -0.022 -7.772 -8.051 -8.447 -4.293 -4.174 -4.025 -0.431 -2.802 -4.470 3.463 -3.586 -4.066 -0.151 -4.354 -2.119 0.737 -4.378 -0.503 -2.915 ML 64 62 6 67 6 1 1 52 71 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 65 62 6 67 6 1 1 52 71 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 66 62 6 67 6 0 0 49 69 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 67 67 5 67 6 1 1 53 73 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 68 68 6 68 5 1 1 53 72 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 15 ] 11 46 U A - - MP 69 68 6 73 6 2 3 51 71 -9.056 -8.995 -0.022 -7.772 -8.051 -8.447 -3.929 -3.744 -3.795 -0.059 -2.795 -4.383 1.526 -3.472 -3.803 0.238 -4.189 -1.651 3.187 -4.089 -0.478 -2.652 ML 70 68 6 73 6 1 1 50 69 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 71 68 6 73 6 1 1 50 69 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 72 68 6 73 6 0 0 47 67 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 73 73 5 73 6 1 1 51 71 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 74 74 6 74 5 1 1 51 70 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 16 ] 12 45 G C - - MP 75 74 6 79 6 2 3 49 69 -9.056 -8.995 -0.022 -7.772 -8.051 -8.447 -4.494 -2.977 -4.573 0.362 -4.883 -4.594 -0.308 -4.796 -4.161 3.573 -4.517 -0.668 -0.701 -4.304 -2.333 -3.454 ML 76 74 6 79 6 1 1 48 68 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 77 74 6 79 6 1 1 48 67 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 78 74 6 79 6 0 0 46 65 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 79 79 5 79 6 1 1 49 69 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 80 80 6 80 5 1 1 49 68 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 17 ] 13 44 G C - - MP 81 80 6 85 6 2 3 47 67 -9.056 -8.995 -0.022 -7.772 -8.051 -8.447 -4.494 -2.977 -4.573 0.362 -4.883 -4.594 -0.308 -4.796 -4.161 3.573 -4.517 -0.668 -0.701 -4.304 -2.333 -3.454 ML 82 80 6 85 6 1 1 47 66 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 83 80 6 85 6 1 1 46 66 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 84 80 6 85 6 0 0 45 64 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 85 85 5 85 6 1 1 47 67 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 86 86 6 86 5 1 1 47 66 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 18 ] 14 43 U A - - MP 87 86 6 91 4 2 2 45 65 -6.809 -7.016 -0.059 -5.430 -3.929 -3.744 -3.795 -0.059 -2.795 -4.383 1.526 -3.472 -3.803 0.238 -4.189 -1.651 3.187 -4.089 -0.478 -2.652 ML 88 86 6 91 4 1 1 46 65 -3.758 -3.940 -0.507 -2.670 0.368 -0.385 -0.191 0.094 MR 89 86 6 91 4 1 1 45 65 -4.809 -3.838 -1.706 -0.766 0.368 -0.385 -0.191 0.094 D 90 86 6 91 4 0 0 44 64 -4.568 -4.250 -2.265 -0.520 IL 91 91 5 91 4 1 1 47 67 -1.686 -2.369 -1.117 -4.855 0.000 0.000 0.000 0.000 IR 92 92 6 92 3 1 1 46 66 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 19 ] 15 - A - - - ML 93 92 6 95 3 1 1 43 62 -8.235 -0.020 -6.552 1.657 -2.113 -1.771 -1.632 D 94 92 6 95 3 0 0 42 61 -5.620 -0.734 -1.403 IL 95 95 3 95 3 1 1 44 63 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 20 ] - 42 - A - - MR 96 95 3 98 5 1 1 42 61 -6.982 -0.042 -6.797 -7.009 -7.901 1.657 -2.113 -1.771 -1.632 D 97 95 3 98 5 0 0 41 60 -5.352 -0.707 -2.978 -4.409 -2.404 IR 98 98 3 98 5 1 1 42 61 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 21 ] 16 41 g u - - MP 99 98 3 103 6 2 2 41 60 -9.056 -8.995 -0.022 -7.772 -8.051 -8.447 -3.457 -2.290 -3.609 1.227 -4.194 -4.923 0.168 -3.655 -3.317 1.573 -3.830 2.892 -0.193 -4.162 -1.772 -2.345 ML 100 98 3 103 6 1 1 39 59 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 101 98 3 103 6 1 1 39 58 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 102 98 3 103 6 0 0 37 56 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 103 103 5 103 6 1 1 41 60 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 104 104 6 104 5 1 1 40 59 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 22 ] 17 40 C G - - MP 105 104 6 109 6 2 2 39 58 -9.056 -8.995 -0.022 -7.772 -8.051 -8.447 -4.293 -4.174 -4.025 -0.431 -2.802 -4.470 3.463 -3.586 -4.066 -0.151 -4.354 -2.119 0.737 -4.378 -0.503 -2.915 ML 106 104 6 109 6 1 1 37 57 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 107 104 6 109 6 1 1 37 56 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 108 104 6 109 6 0 0 35 54 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 109 109 5 109 6 1 1 39 58 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 110 110 6 110 5 1 1 38 57 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 23 ] 18 39 C G - - MP 111 110 6 115 6 2 2 37 56 -9.056 -8.995 -0.022 -7.772 -8.051 -8.447 -4.293 -4.174 -4.025 -0.431 -2.802 -4.470 3.463 -3.586 -4.066 -0.151 -4.354 -2.119 0.737 -4.378 -0.503 -2.915 ML 112 110 6 115 6 1 1 35 55 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 113 110 6 115 6 1 1 35 54 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 114 110 6 115 6 0 0 33 52 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 115 115 5 115 6 1 1 37 56 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 116 116 6 116 5 1 1 36 55 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 24 ] 19 38 A U - - MP 117 116 6 121 6 2 2 35 54 -9.056 -8.995 -0.022 -7.772 -8.051 -8.447 -3.586 -2.672 -3.618 3.179 -3.856 -4.901 0.432 -3.672 -3.520 1.301 -4.057 -0.184 0.013 -4.122 -1.511 -2.465 ML 118 116 6 121 6 1 1 33 53 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 119 116 6 121 6 1 1 33 53 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 120 116 6 121 6 0 0 31 50 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 121 121 5 121 6 1 1 35 54 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 122 122 6 122 5 1 1 34 53 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 25 ] 20 37 G C - - MP 123 122 6 127 6 2 2 33 52 -9.056 -8.995 -0.022 -7.772 -8.051 -8.447 -4.494 -2.977 -4.573 0.362 -4.883 -4.594 -0.308 -4.796 -4.161 3.573 -4.517 -0.668 -0.701 -4.304 -2.333 -3.454 ML 124 122 6 127 6 1 1 32 51 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 125 122 6 127 6 1 1 31 51 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 126 122 6 127 6 0 0 29 49 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 127 127 5 127 6 1 1 33 52 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 128 128 6 128 5 1 1 32 51 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 26 ] 21 36 u g - - MP 129 128 6 133 6 2 2 31 50 -9.056 -8.995 -0.022 -7.772 -8.051 -8.447 -3.832 -3.742 -3.594 -0.103 -2.435 -4.062 1.844 -3.182 -3.631 0.136 -3.951 -1.751 1.033 -3.942 2.821 -2.516 ML 130 128 6 133 6 1 1 30 49 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 131 128 6 133 6 1 1 30 49 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 132 128 6 133 6 0 0 28 48 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 133 133 5 133 6 1 1 31 50 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 134 134 6 134 5 1 1 30 50 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 27 ] 22 35 A U - - MP 135 134 6 139 4 2 2 29 48 -6.809 -7.016 -0.059 -5.430 -3.586 -2.672 -3.618 3.179 -3.856 -4.901 0.432 -3.672 -3.520 1.301 -4.057 -0.184 0.013 -4.122 -1.511 -2.465 ML 136 134 6 139 4 1 1 29 49 -3.758 -3.940 -0.507 -2.670 0.368 -0.385 -0.191 0.094 MR 137 134 6 139 4 1 1 29 48 -4.809 -3.838 -1.706 -0.766 0.368 -0.385 -0.191 0.094 D 138 134 6 139 4 0 0 28 47 -4.568 -4.250 -2.265 -0.520 IL 139 139 5 139 4 1 1 31 50 -1.686 -2.369 -1.117 -4.855 0.000 0.000 0.000 0.000 IR 140 140 6 140 3 1 1 30 49 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 28 ] 23 - U - - - ML 141 140 6 143 3 1 1 26 45 -8.235 -0.020 -6.552 -1.252 -1.290 -1.972 1.544 D 142 140 6 143 3 0 0 25 44 -5.620 -0.734 -1.403 IL 143 143 3 143 3 1 1 27 46 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 29 ] - 34 - U - - MR 144 143 3 146 5 1 1 25 44 -6.982 -0.042 -6.797 -7.009 -7.901 -1.252 -1.290 -1.972 1.544 D 145 143 3 146 5 0 0 24 43 -5.352 -0.707 -2.978 -4.409 -2.404 IR 146 146 3 146 5 1 1 26 45 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 30 ] 24 33 G C - - MP 147 146 3 151 4 2 2 24 43 -6.809 -7.016 -0.059 -5.430 -4.494 -2.977 -4.573 0.362 -4.883 -4.594 -0.308 -4.796 -4.161 3.573 -4.517 -0.668 -0.701 -4.304 -2.333 -3.454 ML 148 146 3 151 4 1 1 25 44 -3.758 -3.940 -0.507 -2.670 0.368 -0.385 -0.191 0.094 MR 149 146 3 151 4 1 1 24 43 -4.809 -3.838 -1.706 -0.766 0.368 -0.385 -0.191 0.094 D 150 146 3 151 4 0 0 23 42 -4.568 -4.250 -2.265 -0.520 IL 151 151 5 151 4 1 1 26 45 -1.686 -2.369 -1.117 -4.855 0.000 0.000 0.000 0.000 IR 152 152 6 152 3 1 1 25 44 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 31 ] 25 - A - - - ML 153 152 6 155 3 1 1 21 40 -7.836 -0.023 -6.490 1.657 -2.113 -1.771 -1.632 D 154 152 6 155 3 0 0 20 39 -6.174 -1.687 -0.566 IL 155 155 3 155 3 1 1 24 43 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 32 ] 26 - A - - - ML 156 155 3 158 3 1 1 20 39 -7.836 -0.023 -6.490 1.657 -2.113 -1.771 -1.632 D 157 155 3 158 3 0 0 19 38 -6.174 -1.687 -0.566 IL 158 158 3 158 3 1 1 23 42 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 33 ] 27 - A - - - ML 159 158 3 161 3 1 1 19 38 -7.836 -0.023 -6.490 1.657 -2.113 -1.771 -1.632 D 160 158 3 161 3 0 0 18 37 -6.174 -1.687 -0.566 IL 161 161 3 161 3 1 1 22 41 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 34 ] 28 - U - - - ML 162 161 3 164 3 1 1 18 36 -7.836 -0.023 -6.490 -1.252 -1.290 -1.972 1.544 D 163 161 3 164 3 0 0 17 36 -6.174 -1.687 -0.566 IL 164 164 3 164 3 1 1 21 40 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 35 ] 29 - A - - - ML 165 164 3 167 3 1 1 16 35 -7.836 -0.023 -6.490 1.657 -2.113 -1.771 -1.632 D 166 164 3 167 3 0 0 16 34 -6.174 -1.687 -0.566 IL 167 167 3 167 3 1 1 20 38 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 36 ] 30 - G - - - ML 168 167 3 170 3 1 1 15 33 -7.836 -0.023 -6.490 -1.305 -2.480 1.651 -1.865 D 169 167 3 170 3 0 0 15 33 -6.174 -1.687 -0.566 IL 170 170 3 170 3 1 1 19 37 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 37 ] 31 - G - - - ML 171 170 3 173 3 1 1 13 32 -7.836 -0.023 -6.490 -1.305 -2.480 1.651 -1.865 D 172 170 3 173 3 0 0 13 32 -6.174 -1.687 -0.566 IL 173 173 3 173 3 1 1 18 36 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 38 ] 32 - G - - - ML 174 173 3 176 2 1 1 1 1 * 0.000 -1.305 -2.480 1.651 -1.865 D 175 173 3 176 2 0 0 0 0 * 0.000 IL 176 176 3 176 2 1 1 13 28 -1.823 -0.479 0.000 0.000 0.000 0.000 [ END 39 ] - - - - - - E 177 176 3 -1 0 0 0 0 0 // HMMER3/f [3.4 | Aug 2023] NAME mir-7147 ACC RF03611 DESC mir-7147 microRNA precursor family LENG 58 MAXL 144 ALPH RNA RF no MM no CONS yes CS yes MAP yes DATE Thu Jul 4 14:22:07 2024 COM [1] /hps/software/users/agb/rfam/bin/cmbuild -F CM SEED COM [2] /hps/software/users/agb/rfam/bin/cmcalibrate --cpu 8 /nfs/production/agb/rfam/15/rescan/families/RF03611/CM NSEQ 2 EFFN 1.714844 CKSUM 1956950561 STATS LOCAL MSV -7.7232 0.72649 STATS LOCAL VITERBI -9.0243 0.72649 STATS LOCAL FORWARD -3.3208 0.72649 HMM A C G U m->m m->i m->d i->m i->i d->m d->d COMPO 1.52573 1.37493 1.25440 1.40882 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 0.00000 * 1 2.30963 2.32606 2.81233 0.29712 1 U - - : 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 2 2.37655 2.89565 0.23129 2.84113 2 G - - < 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 3 2.64160 1.42806 2.38970 0.51530 3 U - - < 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 4 0.50254 2.40033 1.56731 2.34640 4 A - - < 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 5 2.87453 0.33480 2.60521 1.86958 5 C - - < 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 6 2.45308 0.30161 3.01894 2.07550 6 C - - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 7 0.50304 2.39915 1.56726 2.34449 7 A - - < 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 8 2.64145 1.42807 2.38964 0.51532 8 U - - < 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 9 2.37895 2.89805 0.23059 2.84460 9 G - - < 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 10 2.87445 0.33481 2.60517 1.86957 10 C - - < 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 11 2.63284 1.66079 2.34061 0.44337 11 U - - < 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 12 2.37847 2.89757 0.23073 2.84391 12 G - - < 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 13 2.37817 2.89727 0.23082 2.84348 13 G - - < 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 14 2.63163 1.66079 2.34017 0.44357 14 U - - < 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 15 0.22189 2.91308 2.66974 2.58474 15 A - - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 16 1.78374 2.56247 0.40190 2.45537 16 G - - < 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 17 2.87282 0.33506 2.60449 1.86932 17 C - - < 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 18 2.87415 0.33486 2.60505 1.86952 18 C - - < 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 19 0.50256 2.40028 1.56731 2.34631 19 A - - < 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 20 2.37870 2.89780 0.23066 2.84424 20 G - - < 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 21 2.64159 1.42806 2.38969 0.51530 21 U - - < 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 22 0.50270 2.39994 1.56729 2.34577 22 A - - < 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 23 2.30963 2.32606 2.81233 0.29712 23 U - - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 24 2.37607 2.89517 0.23143 2.84044 24 G - - < 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 25 0.22189 2.91308 2.66974 2.58474 25 A - - _ 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 26 0.22189 2.91308 2.66974 2.58474 26 A - - _ 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 27 0.22189 2.91308 2.66974 2.58474 27 A - - _ 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 28 2.30963 2.32606 2.81233 0.29712 28 U - - _ 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 29 0.22189 2.91308 2.66974 2.58474 29 A - - _ 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 30 2.35732 3.18288 0.22266 2.75711 30 G - - _ 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 31 2.35732 3.18288 0.22266 2.75711 31 G - - _ 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 32 2.35732 3.18288 0.22266 2.75711 32 G - - _ 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 33 3.07006 0.26887 2.73180 2.08558 33 C - - > 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 34 2.30963 2.32606 2.81233 0.29712 34 U - - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 35 2.57619 1.82502 2.21527 0.42526 35 U - - > 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 36 1.92592 2.56155 0.37739 2.39223 36 G - - > 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 37 3.06116 0.26999 2.72825 2.08385 37 C - - > 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 38 2.57836 1.82514 2.21595 0.42487 38 U - - > 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 39 2.14485 2.77293 0.28961 2.63274 39 G - - > 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 40 2.14556 2.77376 0.28933 2.63383 40 G - - > 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 41 2.68216 1.63817 2.37186 0.44015 41 U - - > 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 42 0.22189 2.91308 2.66974 2.58474 42 A - - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 43 0.50491 2.51766 1.49746 2.38497 43 A - - > 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 44 3.05890 0.27028 2.72735 2.08341 44 C - - > 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 45 3.05998 0.27014 2.72778 2.08362 45 C - - > 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 46 0.50465 2.51842 1.49745 2.38603 46 A - - > 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 47 2.14432 2.77231 0.28982 2.63192 47 G - - > 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 48 3.06489 0.26952 2.72974 2.08458 48 C - - > 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 49 1.92745 2.56342 0.37653 2.39465 49 G - - > 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 50 2.58253 1.82538 2.21724 0.42411 50 U - - > 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 51 2.30963 2.32606 2.81233 0.29712 51 U - - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 52 2.14435 2.77234 0.28981 2.63196 52 G - - > 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 53 2.57960 1.82521 2.21633 0.42464 53 U - - > 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 54 1.92748 2.56345 0.37652 2.39469 54 G - - > 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 55 3.07048 0.26882 2.73196 2.08566 55 C - - > 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 56 2.45308 0.30161 3.01894 2.07550 56 C - - : 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 57 2.45308 0.30161 3.01894 2.07550 57 C - - : 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 58 2.45308 0.30161 3.01894 2.07550 58 C - - : 1.38629 1.38629 1.38629 1.38629 0.02469 3.71357 * 1.46634 0.26236 0.00000 * //