INFERNAL1/a [1.1.5 | Sep 2023] NAME mir-8286 ACC RF03570 DESC mir-8286 microRNA precursor family STATES 172 NODES 42 CLEN 56 W 72 ALPH RNA RF no CONS yes MAP yes DATE Sun Jul 7 23:57:40 2024 COM [1] /hps/software/users/agb/rfam/bin/cmbuild -F CM SEED COM [2] /hps/software/users/agb/rfam/bin/cmcalibrate --cpu 8 /nfs/production/agb/rfam/15/rescan/families/RF03570/CM PBEGIN 0.05 PEND 0.05 WBETA 1e-07 QDBBETA1 1e-07 QDBBETA2 1e-15 N2OMEGA 1.52588e-05 N3OMEGA 1.52588e-05 ELSELF -0.08926734 NSEQ 2 EFFN 1.777344 CKSUM 2363467004 NULL 0.000 0.000 0.000 0.000 GA 70.00 TC 72.80 NC 69.70 EFP7GF -5.8868 0.72839 ECMLC 0.65550 -5.84253 3.26354 1600000 469328 0.002557 ECMGC 0.42424 -16.49136 -3.02971 1600000 120864 0.003310 ECMLI 0.64247 -4.21848 4.46982 1600000 318724 0.003765 ECMGI 0.45806 -12.03165 -0.28363 1600000 86919 0.004602 CM [ ROOT 0 ] - - - - - - S 0 -1 0 1 4 1 1 72 92 -6.884 -7.091 -0.056 -5.505 IL 1 1 2 1 4 1 19 76 97 -1.686 -2.369 -1.117 -4.855 0.000 0.000 0.000 0.000 IR 2 2 3 2 3 1 19 75 96 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 1 ] 1 - A - - - ML 3 2 3 5 3 1 19 72 93 -7.905 -0.021 -6.559 1.692 -2.253 -1.897 -1.784 D 4 2 3 5 3 0 14 71 91 -6.174 -1.687 -0.566 IL 5 5 3 5 3 1 18 74 95 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 2 ] 2 - C - - - ML 6 5 3 8 5 1 18 71 91 -7.042 -0.040 -6.857 -7.070 -7.961 -1.599 1.583 -2.418 -1.042 D 7 5 3 8 5 0 13 70 90 -4.959 -0.803 -4.221 -2.596 -2.508 IL 8 8 3 8 5 1 17 72 92 -2.408 -0.496 -4.087 -5.920 -5.193 0.000 0.000 0.000 0.000 [ MATP 3 ] 3 56 C G - - MP 9 8 3 13 6 2 17 70 90 -9.084 -9.023 -0.021 -7.799 -8.079 -8.474 -4.433 -4.329 -4.142 -0.571 -2.886 -4.569 3.513 -3.685 -4.188 -0.314 -4.461 -2.274 0.639 -4.510 -0.590 -3.032 ML 10 8 3 13 6 1 14 70 90 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 11 8 3 13 6 1 13 69 89 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 12 8 3 13 6 0 10 68 88 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 13 13 5 13 6 1 15 70 90 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 14 14 6 14 5 1 15 70 90 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 4 ] 4 55 G C - - MP 15 14 6 19 4 2 16 68 88 -6.884 -7.091 -0.056 -5.505 -4.630 -3.041 -4.720 0.274 -5.075 -4.650 -0.467 -4.954 -4.254 3.610 -4.599 -0.736 -0.856 -4.394 -2.499 -3.598 ML 16 14 6 19 4 1 13 69 89 -3.758 -3.940 -0.507 -2.670 0.368 -0.385 -0.191 0.094 MR 17 14 6 19 4 1 11 68 88 -4.809 -3.838 -1.706 -0.766 0.368 -0.385 -0.191 0.094 D 18 14 6 19 4 0 10 67 87 -4.568 -4.250 -2.265 -0.520 IL 19 19 5 19 4 1 15 70 90 -1.686 -2.369 -1.117 -4.855 0.000 0.000 0.000 0.000 IR 20 20 6 20 3 1 14 69 89 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 5 ] 5 - C - - - ML 21 20 6 23 3 1 14 66 86 -7.905 -0.021 -6.559 -1.599 1.583 -2.418 -1.042 D 22 20 6 23 3 0 9 65 85 -6.174 -1.687 -0.566 IL 23 23 3 23 3 1 13 68 88 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 6 ] 6 - A - - - ML 24 23 3 26 3 1 13 65 85 -8.300 -0.019 -6.617 1.692 -2.253 -1.897 -1.784 D 25 23 3 26 3 0 8 64 84 -5.620 -0.734 -1.403 IL 26 26 3 26 3 1 12 66 86 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 7 ] - 54 - A - - MR 27 26 3 29 3 1 12 64 84 -8.300 -0.019 -6.617 1.692 -2.253 -1.897 -1.784 D 28 26 3 29 3 0 6 62 82 -6.390 -1.568 -0.620 IR 29 29 3 29 3 1 11 65 85 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 8 ] - 53 - C - - MR 30 29 3 32 5 1 12 63 83 -7.042 -0.040 -6.857 -7.070 -7.961 -1.599 1.583 -2.418 -1.042 D 31 29 3 32 5 0 5 62 82 -5.352 -0.707 -2.978 -4.409 -2.404 IR 32 32 3 32 5 1 9 63 83 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 9 ] 7 52 C G - - MP 33 32 3 37 6 2 11 62 82 -9.084 -9.023 -0.021 -7.799 -8.079 -8.474 -4.433 -4.329 -4.142 -0.571 -2.886 -4.569 3.513 -3.685 -4.188 -0.314 -4.461 -2.274 0.639 -4.510 -0.590 -3.032 ML 34 32 3 37 6 1 7 61 81 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 35 32 3 37 6 1 6 61 80 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 36 32 3 37 6 0 3 58 78 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 37 37 5 37 6 1 8 62 82 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 38 38 6 38 5 1 8 61 81 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 10 ] 8 51 C G - - MP 39 38 6 43 6 2 9 60 80 -9.084 -9.023 -0.021 -7.799 -8.079 -8.474 -4.433 -4.329 -4.142 -0.571 -2.886 -4.569 3.513 -3.685 -4.188 -0.314 -4.461 -2.274 0.639 -4.510 -0.590 -3.032 ML 40 38 6 43 6 1 6 59 79 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 41 38 6 43 6 1 5 59 79 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 42 38 6 43 6 0 2 57 77 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 43 43 5 43 6 1 7 60 80 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 44 44 6 44 5 1 7 59 79 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 11 ] 9 50 a u - - MP 45 44 6 49 4 2 8 58 78 -6.884 -7.091 -0.056 -5.505 -2.752 -2.315 -2.874 2.171 -2.897 -3.851 1.027 -3.063 -2.861 1.444 -3.398 -0.147 0.703 -3.119 -0.778 1.304 ML 46 44 6 49 4 1 5 58 78 -3.758 -3.940 -0.507 -2.670 0.368 -0.385 -0.191 0.094 MR 47 44 6 49 4 1 3 58 78 -4.809 -3.838 -1.706 -0.766 0.368 -0.385 -0.191 0.094 D 48 44 6 49 4 0 2 57 77 -4.568 -4.250 -2.265 -0.520 IL 49 49 5 49 4 1 7 60 80 -1.686 -2.369 -1.117 -4.855 0.000 0.000 0.000 0.000 IR 50 50 6 50 3 1 6 59 79 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 12 ] 10 - U - - - ML 51 50 6 53 3 1 6 56 75 -8.300 -0.019 -6.617 -1.377 -1.393 -2.105 1.586 D 52 50 6 53 3 0 2 54 74 -5.620 -0.734 -1.403 IL 53 53 3 53 3 1 5 56 76 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 13 ] - 49 - U - - MR 54 53 3 56 3 1 5 55 74 -8.300 -0.019 -6.617 -1.377 -1.393 -2.105 1.586 D 55 53 3 56 3 0 1 53 73 -6.390 -1.568 -0.620 IR 56 56 3 56 3 1 4 55 75 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 14 ] - 48 - U - - MR 57 56 3 59 5 1 4 54 73 -7.042 -0.040 -6.857 -7.070 -7.961 -1.377 -1.393 -2.105 1.586 D 58 56 3 59 5 0 0 53 72 -5.352 -0.707 -2.978 -4.409 -2.404 IR 59 59 3 59 5 1 3 54 74 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 15 ] 11 47 G C - - MP 60 59 3 64 4 2 4 53 72 -6.884 -7.091 -0.056 -5.505 -4.630 -3.041 -4.720 0.274 -5.075 -4.650 -0.467 -4.954 -4.254 3.610 -4.599 -0.736 -0.856 -4.394 -2.499 -3.598 ML 61 59 3 64 4 1 1 53 73 -3.758 -3.940 -0.507 -2.670 0.368 -0.385 -0.191 0.094 MR 62 59 3 64 4 1 1 53 72 -4.809 -3.838 -1.706 -0.766 0.368 -0.385 -0.191 0.094 D 63 59 3 64 4 0 0 51 71 -4.568 -4.250 -2.265 -0.520 IL 64 64 5 64 4 1 2 54 74 -1.686 -2.369 -1.117 -4.855 0.000 0.000 0.000 0.000 IR 65 65 6 65 3 1 2 53 73 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 16 ] 12 - C - - - ML 66 65 6 68 3 1 2 50 70 -8.300 -0.019 -6.617 -1.599 1.583 -2.418 -1.042 D 67 65 6 68 3 0 0 49 68 -5.620 -0.734 -1.403 IL 68 68 3 68 3 1 1 51 71 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 17 ] - 46 - A - - MR 69 68 3 71 5 1 2 49 69 -7.042 -0.040 -6.857 -7.070 -7.961 1.692 -2.253 -1.897 -1.784 D 70 68 3 71 5 0 0 48 67 -5.352 -0.707 -2.978 -4.409 -2.404 IR 71 71 3 71 5 1 1 50 69 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 18 ] 13 45 U A - - MP 72 71 3 76 6 2 3 48 68 -9.084 -9.023 -0.021 -7.799 -8.079 -8.474 -4.069 -3.891 -3.921 -0.194 -2.889 -4.496 1.436 -3.576 -3.927 0.078 -4.306 -1.793 3.267 -4.225 -0.568 -2.763 ML 73 71 3 76 6 1 1 47 66 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 74 71 3 76 6 1 1 47 66 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 75 71 3 76 6 0 0 45 64 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 76 76 5 76 6 1 1 48 67 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 77 77 6 77 5 1 1 48 67 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 19 ] 14 44 C G - - MP 78 77 6 82 6 2 3 46 66 -9.084 -9.023 -0.021 -7.799 -8.079 -8.474 -4.433 -4.329 -4.142 -0.571 -2.886 -4.569 3.513 -3.685 -4.188 -0.314 -4.461 -2.274 0.639 -4.510 -0.590 -3.032 ML 79 77 6 82 6 1 1 46 65 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 80 77 6 82 6 1 1 45 65 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 81 77 6 82 6 0 0 44 63 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 82 82 5 82 6 1 1 46 66 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 83 83 6 83 5 1 1 46 65 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 20 ] 15 43 U A - - MP 84 83 6 88 4 2 2 44 64 -6.884 -7.091 -0.056 -5.505 -4.069 -3.891 -3.921 -0.194 -2.889 -4.496 1.436 -3.576 -3.927 0.078 -4.306 -1.793 3.267 -4.225 -0.568 -2.763 ML 85 83 6 88 4 1 1 45 64 -3.758 -3.940 -0.507 -2.670 0.368 -0.385 -0.191 0.094 MR 86 83 6 88 4 1 1 44 64 -4.809 -3.838 -1.706 -0.766 0.368 -0.385 -0.191 0.094 D 87 83 6 88 4 0 0 43 63 -4.568 -4.250 -2.265 -0.520 IL 88 88 5 88 4 1 1 46 66 -1.686 -2.369 -1.117 -4.855 0.000 0.000 0.000 0.000 IR 89 89 6 89 3 1 1 45 65 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 21 ] 16 - A - - - ML 90 89 6 92 3 1 1 42 61 -7.905 -0.021 -6.559 1.692 -2.253 -1.897 -1.784 D 91 89 6 92 3 0 0 40 60 -6.174 -1.687 -0.566 IL 92 92 3 92 3 1 1 44 64 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 22 ] 17 - U - - - ML 93 92 3 95 3 1 1 41 60 -8.300 -0.019 -6.617 -1.377 -1.393 -2.105 1.586 D 94 92 3 95 3 0 0 39 59 -5.620 -0.734 -1.403 IL 95 95 3 95 3 1 1 42 61 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 23 ] - 42 - A - - MR 96 95 3 98 3 1 1 40 59 -8.300 -0.019 -6.617 1.692 -2.253 -1.897 -1.784 D 97 95 3 98 3 0 0 38 57 -6.390 -1.568 -0.620 IR 98 98 3 98 3 1 1 40 60 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 24 ] - 41 - C - - MR 99 98 3 101 5 1 1 39 58 -7.042 -0.040 -6.857 -7.070 -7.961 -1.599 1.583 -2.418 -1.042 D 100 98 3 101 5 0 0 37 57 -5.352 -0.707 -2.978 -4.409 -2.404 IR 101 101 3 101 5 1 1 39 58 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 25 ] 18 40 C G - - MP 102 101 3 106 6 2 2 38 57 -9.084 -9.023 -0.021 -7.799 -8.079 -8.474 -4.433 -4.329 -4.142 -0.571 -2.886 -4.569 3.513 -3.685 -4.188 -0.314 -4.461 -2.274 0.639 -4.510 -0.590 -3.032 ML 103 101 3 106 6 1 1 36 56 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 104 101 3 106 6 1 1 36 55 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 105 101 3 106 6 0 0 34 53 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 106 106 5 106 6 1 1 37 57 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 107 107 6 107 5 1 1 37 56 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 26 ] 19 39 C G - - MP 108 107 6 112 6 2 2 36 55 -9.084 -9.023 -0.021 -7.799 -8.079 -8.474 -4.433 -4.329 -4.142 -0.571 -2.886 -4.569 3.513 -3.685 -4.188 -0.314 -4.461 -2.274 0.639 -4.510 -0.590 -3.032 ML 109 107 6 112 6 1 1 35 54 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 110 107 6 112 6 1 1 35 54 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 111 107 6 112 6 0 0 33 52 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 112 112 5 112 6 1 1 36 55 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 113 113 6 113 5 1 1 35 54 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 27 ] 20 38 A U - - MP 114 113 6 118 4 2 2 34 53 -6.884 -7.091 -0.056 -5.505 -3.696 -2.753 -3.722 3.267 -4.013 -5.067 0.281 -3.770 -3.618 1.181 -4.160 -0.245 -0.137 -4.270 -1.661 -2.561 ML 115 113 6 118 4 1 1 34 54 -3.758 -3.940 -0.507 -2.670 0.368 -0.385 -0.191 0.094 MR 116 113 6 118 4 1 1 34 53 -4.809 -3.838 -1.706 -0.766 0.368 -0.385 -0.191 0.094 D 117 113 6 118 4 0 0 33 52 -4.568 -4.250 -2.265 -0.520 IL 118 118 5 118 4 1 1 36 55 -1.686 -2.369 -1.117 -4.855 0.000 0.000 0.000 0.000 IR 119 119 6 119 3 1 1 35 54 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 28 ] 21 - U - - - ML 120 119 6 122 3 1 1 31 50 -8.300 -0.019 -6.617 -1.377 -1.393 -2.105 1.586 D 121 119 6 122 3 0 0 30 49 -5.620 -0.734 -1.403 IL 122 122 3 122 3 1 1 32 51 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 29 ] - 37 - U - - MR 123 122 3 125 5 1 1 30 49 -7.042 -0.040 -6.857 -7.070 -7.961 -1.377 -1.393 -2.105 1.586 D 124 122 3 125 5 0 0 29 48 -5.352 -0.707 -2.978 -4.409 -2.404 IR 125 125 3 125 5 1 1 30 49 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 30 ] 22 36 C G - - MP 126 125 3 130 6 2 2 29 48 -9.084 -9.023 -0.021 -7.799 -8.079 -8.474 -4.433 -4.329 -4.142 -0.571 -2.886 -4.569 3.513 -3.685 -4.188 -0.314 -4.461 -2.274 0.639 -4.510 -0.590 -3.032 ML 127 125 3 130 6 1 1 28 47 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 128 125 3 130 6 1 1 27 46 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 129 125 3 130 6 0 0 25 44 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 130 130 5 130 6 1 1 29 48 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 131 131 6 131 5 1 1 28 47 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 31 ] 23 35 U A - - MP 132 131 6 136 6 2 2 27 46 -9.084 -9.023 -0.021 -7.799 -8.079 -8.474 -4.069 -3.891 -3.921 -0.194 -2.889 -4.496 1.436 -3.576 -3.927 0.078 -4.306 -1.793 3.267 -4.225 -0.568 -2.763 ML 133 131 6 136 6 1 1 26 45 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 134 131 6 136 6 1 1 26 45 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 135 131 6 136 6 0 0 24 43 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 136 136 5 136 6 1 1 27 46 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 137 137 6 137 5 1 1 26 45 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 32 ] 24 34 C G - - MP 138 137 6 142 6 2 2 25 44 -9.084 -9.023 -0.021 -7.799 -8.079 -8.474 -4.433 -4.329 -4.142 -0.571 -2.886 -4.569 3.513 -3.685 -4.188 -0.314 -4.461 -2.274 0.639 -4.510 -0.590 -3.032 ML 139 137 6 142 6 1 1 25 43 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 140 137 6 142 6 1 1 24 43 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 141 137 6 142 6 0 0 23 42 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 142 142 5 142 6 1 1 25 44 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 143 143 6 143 5 1 1 25 43 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 33 ] 25 33 G U - - MP 144 143 6 148 4 2 2 23 42 -6.884 -7.091 -0.056 -5.505 -3.543 -2.340 -3.703 1.178 -4.359 -5.084 0.021 -3.737 -3.385 1.457 -3.903 3.002 -0.339 -4.308 -1.921 -2.419 ML 145 143 6 148 4 1 1 24 43 -3.758 -3.940 -0.507 -2.670 0.368 -0.385 -0.191 0.094 MR 146 143 6 148 4 1 1 23 42 -4.809 -3.838 -1.706 -0.766 0.368 -0.385 -0.191 0.094 D 147 143 6 148 4 0 0 22 41 -4.568 -4.250 -2.265 -0.520 IL 148 148 5 148 4 1 1 25 44 -1.686 -2.369 -1.117 -4.855 0.000 0.000 0.000 0.000 IR 149 149 6 149 3 1 1 24 43 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 34 ] 26 - A - - - ML 150 149 6 152 3 1 1 20 39 -7.905 -0.021 -6.559 1.692 -2.253 -1.897 -1.784 D 151 149 6 152 3 0 0 19 38 -6.174 -1.687 -0.566 IL 152 152 3 152 3 1 1 23 42 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 35 ] 27 - A - - - ML 153 152 3 155 3 1 1 19 37 -7.905 -0.021 -6.559 1.692 -2.253 -1.897 -1.784 D 154 152 3 155 3 0 0 18 37 -6.174 -1.687 -0.566 IL 155 155 3 155 3 1 1 22 41 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 36 ] 28 - U - - - ML 156 155 3 158 3 1 1 18 36 -7.905 -0.021 -6.559 -1.377 -1.393 -2.105 1.586 D 157 155 3 158 3 0 0 17 36 -6.174 -1.687 -0.566 IL 158 158 3 158 3 1 1 21 40 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 37 ] 29 - U - - - ML 159 158 3 161 3 1 1 16 35 -7.905 -0.021 -6.559 -1.377 -1.393 -2.105 1.586 D 160 158 3 161 3 0 0 16 34 -6.174 -1.687 -0.566 IL 161 161 3 161 3 1 1 20 38 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 38 ] 30 - G - - - ML 162 161 3 164 3 1 1 15 33 -7.905 -0.021 -6.559 -1.454 -2.654 1.693 -2.040 D 163 161 3 164 3 0 0 15 33 -6.174 -1.687 -0.566 IL 164 164 3 164 3 1 1 19 37 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 39 ] 31 - A - - - ML 165 164 3 167 3 1 1 13 32 -7.905 -0.021 -6.559 1.692 -2.253 -1.897 -1.784 D 166 164 3 167 3 0 0 13 32 -6.174 -1.687 -0.566 IL 167 167 3 167 3 1 1 18 36 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 40 ] 32 - G - - - ML 168 167 3 170 2 1 1 1 1 * 0.000 -1.454 -2.654 1.693 -2.040 D 169 167 3 170 2 0 0 0 0 * 0.000 IL 170 170 3 170 2 1 1 13 28 -1.823 -0.479 0.000 0.000 0.000 0.000 [ END 41 ] - - - - - - E 171 170 3 -1 0 0 0 0 0 // HMMER3/f [3.4 | Aug 2023] NAME mir-8286 ACC RF03570 DESC mir-8286 microRNA precursor family LENG 56 MAXL 141 ALPH RNA RF no MM no CONS yes CS yes MAP yes DATE Sun Jul 7 23:57:40 2024 COM [1] /hps/software/users/agb/rfam/bin/cmbuild -F CM SEED COM [2] /hps/software/users/agb/rfam/bin/cmcalibrate --cpu 8 /nfs/production/agb/rfam/15/rescan/families/RF03570/CM NSEQ 2 EFFN 1.660156 CKSUM 2363467004 STATS LOCAL MSV -7.5662 0.72839 STATS LOCAL VITERBI -9.0020 0.72839 STATS LOCAL FORWARD -3.2836 0.72839 HMM A C G U m->m m->i m->d i->m i->i d->m d->d COMPO 1.40636 1.34895 1.40456 1.38639 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 0.00000 * 1 0.22968 2.88233 2.64209 2.55115 1 A - - : 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 2 2.41657 0.31356 2.98081 2.04656 2 C - - : 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 3 2.84664 0.34507 2.57193 1.84893 3 C - - < 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 4 2.36071 2.86573 0.23735 2.81363 4 G - - < 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 5 2.41657 0.31356 2.98081 2.04656 5 C - - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 6 0.22968 2.88233 2.64209 2.55115 6 A - - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 7 2.83989 0.34616 2.56916 1.84790 7 C - - < 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 8 2.84377 0.34553 2.57075 1.84850 8 C - - < 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 9 1.18565 1.87353 1.40257 1.22109 9 a - - < 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 10 2.28189 2.30334 2.78294 0.30635 10 U - - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 11 2.35675 2.86186 0.23853 2.80799 11 G - - < 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 12 2.41657 0.31356 2.98081 2.04656 12 C - - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 13 2.60133 1.64100 2.30660 0.45817 13 U - - < 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 14 2.84442 0.34543 2.57102 1.84860 14 C - - < 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 15 2.60463 1.64099 2.30777 0.45760 15 U - - < 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 16 0.22968 2.88233 2.64209 2.55115 16 A - - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 17 2.28189 2.30334 2.78294 0.30635 17 U - - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 18 2.83984 0.34617 2.56914 1.84789 18 C - - < 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 19 2.84374 0.34554 2.57074 1.84849 19 C - - < 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 20 0.52049 2.36815 1.54462 2.31542 20 A - - < 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 21 2.28189 2.30334 2.78294 0.30635 21 U - - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 22 2.84034 0.34609 2.56934 1.84797 22 C - - < 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 23 2.60357 1.64099 2.30740 0.45778 23 U - - < 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 24 2.84522 0.34530 2.57135 1.84872 24 C - - < 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 25 1.77368 2.53317 0.41139 2.42866 25 G - - < 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 26 0.22968 2.88233 2.64209 2.55115 26 A - - _ 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 27 0.22968 2.88233 2.64209 2.55115 27 A - - _ 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 28 2.28189 2.30334 2.78294 0.30635 28 U - - _ 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 29 2.28189 2.30334 2.78294 0.30635 29 U - - _ 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 30 2.32438 3.14435 0.23183 2.71838 30 G - - _ 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 31 0.22968 2.88233 2.64209 2.55115 31 A - - _ 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 32 2.32438 3.14435 0.23183 2.71838 32 G - - _ 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 33 2.64910 1.61359 2.33975 0.45608 33 U - - > 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 34 2.12370 2.73891 0.29874 2.60343 34 G - - > 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 35 0.52071 2.48608 1.47755 2.35948 35 A - - > 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 36 2.12521 2.74066 0.29812 2.60575 36 G - - > 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 37 2.28189 2.30334 2.78294 0.30635 37 U - - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 38 2.54881 1.79928 2.18445 0.44026 38 U - - > 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 39 2.12433 2.73964 0.29848 2.60439 39 G - - > 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 40 2.12514 2.74058 0.29814 2.60564 40 G - - > 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 41 2.41657 0.31356 2.98081 2.04656 41 C - - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 42 0.22968 2.88233 2.64209 2.55115 42 A - - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 43 0.52087 2.48561 1.47757 2.35882 43 A - - > 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 44 2.12446 2.73979 0.29843 2.60459 44 G - - > 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 45 0.52046 2.48678 1.47753 2.36047 45 A - - > 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 46 0.22968 2.88233 2.64209 2.55115 46 A - - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 47 3.03816 0.27687 2.69796 2.06687 47 C - - > 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 48 2.28189 2.30334 2.78294 0.30635 48 U - - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 49 2.28189 2.30334 2.78294 0.30635 49 U - - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 50 2.00492 1.61377 1.68589 0.73206 50 u - - > 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 51 2.12433 2.73964 0.29848 2.60440 51 G - - > 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 52 2.12515 2.74059 0.29814 2.60565 52 G - - > 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 53 2.41657 0.31356 2.98081 2.04656 53 C - - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 54 0.22968 2.88233 2.64209 2.55115 54 A - - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 55 3.02638 0.27842 2.69331 2.06458 55 C - - > 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 56 2.12019 2.73486 0.30020 2.59805 56 G - - > 1.38629 1.38629 1.38629 1.38629 0.02469 3.71357 * 1.46634 0.26236 0.00000 * //