INFERNAL1/a [1.1.5 | Sep 2023] NAME Flavi_NKV_xrRNA ACC RF03539 DESC No-known vector Flavivirus exoribonuclease-resistant RNA element STATES 261 NODES 70 CLEN 84 W 112 ALPH RNA RF no CONS yes MAP yes DATE Fri Jul 12 14:12:28 2024 COM [1] /hps/software/users/agb/rfam/bin/cmbuild -F CM SEED COM [2] /hps/software/users/agb/rfam/bin/cmcalibrate --cpu 8 /nfs/production/agb/rfam/15/rescan/families/RF03539/CM PBEGIN 0.05 PEND 0.05 WBETA 1e-07 QDBBETA1 1e-07 QDBBETA2 1e-15 N2OMEGA 1.52588e-05 N3OMEGA 1.52588e-05 ELSELF -0.08926734 NSEQ 3 EFFN 2.540039 CKSUM 244307778 NULL 0.000 0.000 0.000 0.000 GA 50.00 TC 82.80 NC 38.40 EFP7GF -4.0167 0.73145 ECMLC 0.59910 -7.66042 1.95959 1600000 382085 0.003141 ECMGC 0.44163 -13.47537 -2.61498 1600000 48422 0.008261 ECMLI 0.59824 -5.18786 3.75586 1600000 252862 0.004746 ECMGI 0.50066 -8.42866 0.87702 1600000 42210 0.009476 CM [ ROOT 0 ] - - - - - - S 0 -1 0 1 4 0 1 112 147 -7.078 -8.323 -0.374 -2.198 IL 1 1 2 1 4 5 34 114 148 -2.817 -4.319 -0.613 -2.698 0.000 0.000 0.000 0.000 IR 2 2 3 2 3 5 35 114 148 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 1 ] - 91 - A - - MR 3 2 3 5 3 5 34 112 147 -8.283 -0.020 -6.601 1.684 -2.218 -1.865 -1.745 D 4 2 3 5 3 2 31 111 146 -7.799 -0.414 -2.029 IR 5 5 3 5 3 4 34 113 147 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 2 ] - 90 - c - - MR 6 5 3 8 3 5 33 111 146 -8.557 -0.016 -6.875 -0.555 0.671 -0.023 -0.429 D 7 5 3 8 3 1 29 109 144 -6.390 -1.568 -0.620 IR 8 8 3 8 3 4 33 112 146 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 3 ] - 89 - U - - MR 9 8 3 11 3 4 32 110 145 -8.557 -0.016 -6.875 -1.893 -1.819 -2.644 1.717 D 10 8 3 11 3 1 28 108 143 -6.390 -1.568 -0.620 IR 11 11 3 11 3 3 32 111 145 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 4 ] - 88 - g - - MR 12 11 3 14 3 3 31 109 144 -8.557 -0.016 -6.875 -0.518 -0.155 0.807 -0.613 D 13 11 3 14 3 1 28 107 142 -6.390 -1.568 -0.620 IR 14 14 3 14 3 3 31 110 144 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 5 ] - 87 - A - - MR 15 14 3 17 3 2 30 108 143 -8.557 -0.337 -2.283 1.798 -2.809 -2.398 -2.396 D 16 14 3 17 3 1 27 106 141 -6.390 -1.568 -0.620 IR 17 17 3 17 3 3 32 109 144 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 6 ] - 86 - C - - MR 18 17 3 20 3 4 33 108 142 -8.240 -0.020 -6.558 -1.448 1.534 -2.260 -0.922 D 19 17 3 20 3 0 26 104 139 -7.920 -3.098 -0.186 IR 20 20 3 20 3 3 32 108 143 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 7 ] - 85 - C - - MR 21 20 3 23 3 4 33 107 141 -8.240 -0.020 -6.558 -1.448 1.534 -2.260 -0.922 D 22 20 3 23 3 0 26 103 138 -7.920 -3.098 -0.186 IR 23 23 3 23 3 3 31 107 142 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 8 ] - 84 - G - - MR 24 23 3 26 3 4 32 106 140 -8.240 -0.020 -6.558 -1.318 -2.495 1.655 -1.881 D 25 23 3 26 3 0 25 102 137 -7.920 -3.098 -0.186 IR 26 26 3 26 3 3 31 106 141 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 9 ] - 83 - a - - MR 27 26 3 29 3 4 32 105 139 -8.240 -0.020 -6.558 0.685 -1.292 0.452 -0.700 D 28 26 3 29 3 0 25 101 136 -7.920 -3.098 -0.186 IR 29 29 3 29 3 3 31 105 140 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 10 ] - 82 - u - - MR 30 29 3 32 3 4 31 104 138 -8.240 -0.020 -6.558 -0.307 -0.876 0.300 0.502 D 31 29 3 32 3 0 25 100 135 -7.920 -3.098 -0.186 IR 32 32 3 32 3 2 30 104 139 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 11 ] - 81 - U - - MR 33 32 3 35 3 3 30 103 137 -8.240 -0.020 -6.558 -1.263 -1.299 -1.984 1.548 D 34 32 3 35 3 0 25 100 134 -7.920 -3.098 -0.186 IR 35 35 3 35 3 2 30 103 138 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 12 ] - 80 - U - - MR 36 35 3 38 3 3 29 102 136 -8.240 -0.020 -6.558 -1.263 -1.299 -1.984 1.548 D 37 35 3 38 3 0 25 99 133 -7.920 -3.098 -0.186 IR 38 38 3 38 3 2 29 102 137 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 13 ] - 79 - a - - MR 39 38 3 41 3 3 29 101 135 -8.240 -0.020 -6.558 0.601 0.209 -1.031 -0.254 D 40 38 3 41 3 0 24 98 133 -7.920 -3.098 -0.186 IR 41 41 3 41 3 2 28 101 136 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 14 ] - 78 - A - - MR 42 41 3 44 3 3 28 100 134 -8.240 -0.020 -6.558 1.660 -2.126 -1.782 -1.645 D 43 41 3 44 3 0 24 98 132 -7.920 -3.098 -0.186 IR 44 44 3 44 3 2 28 100 135 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 15 ] - 77 - U - - MR 45 44 3 47 3 2 27 99 133 -8.240 -0.020 -6.558 -1.263 -1.299 -1.984 1.548 D 46 44 3 47 3 0 24 98 132 -7.920 -0.376 -2.150 IR 47 47 3 47 3 1 26 99 134 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 16 ] - 76 - A - - MR 48 47 3 50 3 2 26 98 132 -8.557 -0.016 -6.875 1.026 -1.592 0.191 -1.030 D 49 47 3 50 3 0 21 96 130 -6.390 -1.568 -0.620 IR 50 50 3 50 3 1 25 98 133 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 17 ] - 75 - A - - MR 51 50 3 53 3 2 25 97 131 -8.557 -0.016 -6.875 1.798 -2.809 -2.398 -2.396 D 52 50 3 53 3 0 21 95 129 -6.390 -1.568 -0.620 IR 53 53 3 53 3 1 25 97 132 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 18 ] - 74 - A - - MR 54 53 3 56 3 2 24 96 130 -8.557 -0.016 -6.875 1.026 -1.592 0.191 -1.030 D 55 53 3 56 3 0 20 94 128 -6.390 -1.568 -0.620 IR 56 56 3 56 3 1 24 96 131 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 19 ] - 73 - u - - MR 57 56 3 59 3 1 23 95 129 -8.557 -0.016 -6.875 -0.524 -1.009 -0.026 0.868 D 58 56 3 59 3 0 19 93 127 -6.390 -1.568 -0.620 IR 59 59 3 59 3 1 23 95 130 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 20 ] - 72 - G - - MR 60 59 3 62 3 1 22 94 128 -8.557 -0.016 -6.875 -2.034 -3.319 1.808 -2.706 D 61 59 3 62 3 0 19 92 126 -6.390 -1.568 -0.620 IR 62 62 3 62 3 1 22 94 129 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 21 ] - 71 - u - - MR 63 62 3 65 3 1 21 93 127 -8.557 -0.016 -6.875 0.261 -0.954 -1.251 0.899 D 64 62 3 65 3 0 18 91 126 -6.390 -1.568 -0.620 IR 65 65 3 65 3 1 21 93 128 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 22 ] - 70 - u - - MR 66 65 3 68 3 1 20 92 126 -8.557 -0.293 -2.464 -0.524 -1.009 -0.026 0.868 D 67 65 3 68 3 0 17 90 125 -6.390 -1.568 -0.620 IR 68 68 3 68 3 1 22 93 127 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 23 ] - 69 - a - - MR 69 68 3 71 5 1 22 91 126 -7.027 -0.041 -6.842 -7.054 -7.946 0.600 -0.822 -1.008 0.507 D 70 68 3 71 5 0 17 90 124 -6.299 -0.324 -3.926 -5.357 -3.351 IR 71 71 3 71 5 1 19 91 126 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 24 ] 1 68 g c - - MP 72 71 3 76 6 2 22 90 125 -9.200 -9.139 -0.020 -7.916 -8.195 -8.591 -3.110 -2.558 -3.156 1.735 -3.064 -3.956 1.216 -3.348 -3.245 2.264 -3.719 -0.381 1.577 -3.246 -0.746 -2.134 ML 73 71 3 76 6 1 17 88 123 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 74 71 3 76 6 1 17 88 123 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 75 71 3 76 6 0 13 85 120 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 76 76 5 76 6 1 19 90 124 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 77 77 6 77 5 1 19 89 124 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 25 ] 2 67 g c - - MP 78 77 6 82 6 2 20 88 123 -9.200 -9.139 -0.163 -7.916 -3.368 -8.591 -3.226 0.940 -3.292 1.860 -3.740 -4.132 0.380 -3.646 -3.346 2.555 -3.805 -0.119 0.135 -3.402 -1.450 -2.282 ML 79 77 6 82 6 1 17 86 121 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 80 77 6 82 6 1 17 86 121 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 81 77 6 82 6 0 12 83 118 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 82 82 5 82 6 1 18 88 122 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 83 83 6 83 5 1 18 87 122 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 26 ] 3 66 c g - - MP 84 83 6 88 6 2 19 86 121 -9.058 -8.998 -0.022 -7.774 -8.054 -8.449 -3.018 -2.528 -3.098 0.933 -2.722 -3.845 2.216 -3.108 -3.071 1.488 -3.526 1.294 1.097 -3.253 -0.430 -2.031 ML 85 83 6 88 6 1 16 85 119 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 86 83 6 88 6 1 16 85 119 -8.093 -6.822 -0.544 -6.800 -1.934 -5.014 -0.748 1.190 -1.514 -0.373 D 87 83 6 88 6 0 12 82 116 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 88 88 5 88 6 1 17 86 120 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 89 89 6 89 5 1 17 85 120 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 27 ] 4 65 g c - - MP 90 89 6 94 6 2 17 84 119 -9.200 -9.139 -0.020 -7.916 -8.195 -8.591 -3.622 -2.768 -3.595 0.816 -3.511 -4.236 0.937 -3.772 -3.679 2.902 -4.082 -0.500 1.461 -3.619 -1.075 -2.525 ML 91 89 6 94 6 1 15 83 117 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 92 89 6 94 6 1 14 83 117 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 93 89 6 94 6 0 12 80 115 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 94 94 5 94 6 1 16 84 118 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 95 95 6 95 5 1 16 83 118 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 28 ] 5 64 g c - - MP 96 95 6 100 4 2 15 82 117 -7.179 -7.386 -0.045 -5.800 -2.548 0.303 -2.670 1.042 -2.645 -3.449 1.213 -2.945 -2.744 2.157 -3.240 -0.337 0.923 -2.764 0.876 -1.777 ML 97 95 6 100 4 1 14 82 116 -3.758 -3.940 -0.507 -2.670 0.368 -0.385 -0.191 0.094 MR 98 95 6 100 4 1 13 81 115 -4.809 -3.838 -1.706 -0.766 0.368 -0.385 -0.191 0.094 D 99 95 6 100 4 0 11 80 114 -4.568 -4.250 -2.265 -0.520 IL 100 100 5 100 4 1 15 83 117 -1.686 -2.369 -1.117 -4.855 0.000 0.000 0.000 0.000 IR 101 101 6 101 3 1 15 82 117 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 29 ] 6 - g - - - ML 102 101 6 104 3 1 14 80 115 -8.180 -0.018 -6.834 -0.613 -1.321 0.940 0.039 D 103 101 6 104 3 0 11 79 113 -6.174 -1.687 -0.566 IL 104 104 3 104 3 1 14 81 116 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 30 ] 7 - U - - - ML 105 104 3 107 3 1 13 79 114 -8.557 -0.296 -2.451 -1.893 -1.819 -2.644 1.717 D 106 104 3 107 3 0 10 78 112 -5.620 -0.734 -1.403 IL 107 107 3 107 3 1 14 80 114 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 31 ] - 63 - a - - MR 108 107 3 110 3 1 15 78 113 -8.281 -0.020 -6.598 0.751 -1.320 0.395 -0.732 D 109 107 3 110 3 0 9 76 111 -7.807 -2.985 -0.202 IR 110 110 3 110 3 1 14 79 113 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 32 ] - 62 - u - - MR 111 110 3 113 5 1 14 77 112 -7.024 -0.041 -6.840 -7.052 -7.944 -0.647 0.499 -1.421 0.655 D 112 110 3 113 5 0 9 76 111 -6.306 -0.322 -3.932 -5.363 -3.357 IR 113 113 3 113 5 1 11 78 112 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 33 ] 8 61 g c - - MP 114 113 3 118 6 2 15 76 111 -9.200 -9.139 -0.020 -7.916 -8.195 -8.591 -3.183 -2.529 -3.232 0.995 -3.155 -3.979 1.841 -3.416 -3.302 2.317 -3.747 0.968 0.812 -3.298 -0.802 -2.187 ML 115 113 3 118 6 1 9 75 109 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 116 113 3 118 6 1 9 74 109 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 117 113 3 118 6 0 5 71 106 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 118 118 5 118 6 1 11 76 110 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 119 119 6 119 5 1 11 76 110 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 34 ] 9 60 A U - - MP 120 119 6 124 6 2 14 74 109 -9.200 -9.139 -0.020 -7.916 -8.195 -8.591 -4.195 -3.129 -4.177 3.540 -4.726 -5.834 -0.398 -4.191 -4.059 0.642 -4.626 -0.545 -0.813 -4.949 -2.337 -2.992 ML 121 119 6 124 6 1 9 73 107 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 122 119 6 124 6 1 8 72 107 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 123 119 6 124 6 0 5 69 104 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 124 124 5 124 6 1 10 74 108 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 125 125 6 125 5 1 10 74 108 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 35 ] 10 59 G C - - MP 126 125 6 130 6 2 12 72 107 -9.200 -9.139 -0.020 -7.916 -8.195 -8.591 -5.165 -3.299 -5.316 -0.090 -5.826 -4.854 -1.085 -5.580 -4.593 3.725 -4.902 -1.017 -1.460 -4.742 -3.147 -4.187 ML 127 125 6 130 6 1 8 71 105 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 128 125 6 130 6 1 8 70 105 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 129 125 6 130 6 0 4 67 102 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 130 130 5 130 6 1 9 72 106 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 131 131 6 131 5 1 10 72 106 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 36 ] 11 58 G C - - MP 132 131 6 136 6 2 11 70 105 -9.200 -9.139 -0.020 -7.916 -8.195 -8.591 -5.165 -3.299 -5.316 -0.090 -5.826 -4.854 -1.085 -5.580 -4.593 3.725 -4.902 -1.017 -1.460 -4.742 -3.147 -4.187 ML 133 131 6 136 6 1 8 69 103 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 134 131 6 136 6 1 7 68 103 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 135 131 6 136 6 0 4 66 100 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 136 136 5 136 6 1 9 70 104 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 137 137 6 137 5 1 9 70 104 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 37 ] 12 57 g c - - MP 138 137 6 142 4 2 9 68 103 -7.179 -2.129 -0.422 -5.800 -3.667 -2.889 -3.622 0.722 -3.331 -4.247 1.918 -3.701 -3.697 2.792 -4.096 -0.635 0.643 -3.671 -0.908 -2.534 ML 139 137 6 142 4 1 7 67 101 -3.758 -3.940 -0.507 -2.670 0.368 -0.385 -0.191 0.094 MR 140 137 6 142 4 1 5 66 100 -4.809 -3.838 -1.706 -0.766 0.368 -0.385 -0.191 0.094 D 141 137 6 142 4 0 4 65 99 -4.568 -4.250 -2.265 -0.520 IL 142 142 5 142 4 1 8 68 103 -1.686 -2.369 -1.117 -4.855 0.000 0.000 0.000 0.000 IR 143 143 6 143 3 1 8 69 103 -0.848 -1.240 -5.569 0.000 0.000 0.000 0.000 [ MATL 38 ] 13 - C - - - ML 144 143 6 146 3 1 7 64 98 -8.180 -0.018 -6.834 -2.271 1.741 -3.102 -1.579 D 145 143 6 146 3 0 4 62 96 -6.174 -1.687 -0.566 IL 146 146 3 146 3 1 7 65 99 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 39 ] 14 - A - - - ML 147 146 3 149 3 1 6 63 97 -8.180 -0.018 -6.834 1.798 -2.809 -2.398 -2.396 D 148 146 3 149 3 0 3 61 95 -6.174 -1.687 -0.566 IL 149 149 3 149 3 1 6 64 98 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 40 ] 15 - A - - - ML 150 149 3 152 3 1 5 62 96 -8.180 -0.360 -2.200 1.798 -2.809 -2.398 -2.396 D 151 149 3 152 3 0 3 60 94 -6.174 -1.687 -0.566 IL 152 152 3 152 3 1 6 63 97 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 41 ] 16 - C - - - ML 153 152 3 155 3 1 5 61 96 -7.842 -0.022 -6.496 -1.448 1.534 -2.260 -0.922 D 154 152 3 155 3 0 2 59 93 -7.871 -3.384 -0.152 IL 155 155 3 155 3 1 5 62 96 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 42 ] 17 - u - - - ML 156 155 3 158 3 1 4 60 95 -7.842 -0.022 -6.496 -0.609 0.410 -1.375 0.705 D 157 155 3 158 3 0 2 58 93 -7.871 -3.384 -0.152 IL 158 158 3 158 3 1 4 61 95 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 43 ] 18 - a - - - ML 159 158 3 161 2 1 3 59 94 -8.208 -0.005 0.593 0.219 -1.033 -0.252 D 160 158 3 161 2 0 2 58 93 -8.628 -0.004 IL 161 161 3 161 2 1 3 60 94 -1.823 -0.479 0.000 0.000 0.000 0.000 [ BIF 44 ] - - - - - - B 162 161 3 163 204 0 2 58 92 [ BEGL 45 ] - - - - - - S 163 162 1 164 4 0 0 27 45 -0.041 -6.955 -6.362 -7.002 [ MATP 46 ] 19 31 g c - - MP 164 163 1 168 6 2 2 27 45 -9.200 -9.139 -0.020 -7.916 -8.195 -8.591 -3.618 -2.769 -3.592 0.816 -3.503 -4.234 0.944 -3.767 -3.675 2.896 -4.079 -0.501 1.471 -3.617 -1.069 -2.521 ML 165 163 1 168 6 1 1 25 44 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 166 163 1 168 6 1 1 25 44 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 167 163 1 168 6 0 0 23 42 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 168 168 5 168 6 1 1 26 45 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 169 169 6 169 5 1 1 26 45 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 47 ] 20 30 g c - - MP 170 169 6 174 6 2 2 25 43 -9.200 -9.139 -0.020 -7.916 -8.195 -8.591 -3.113 -2.556 -3.158 1.736 -3.070 -3.957 1.211 -3.352 -3.248 2.272 -3.721 -0.378 1.570 -3.247 -0.751 -2.136 ML 171 169 6 174 6 1 1 23 42 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 172 169 6 174 6 1 1 23 42 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 173 169 6 174 6 0 0 21 40 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 174 174 5 174 6 1 1 24 43 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 175 175 6 175 5 1 1 24 43 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 48 ] 21 29 g c - - MP 176 175 6 180 6 2 2 23 41 -9.200 -9.139 -0.020 -7.916 -8.195 -8.591 -3.125 -2.512 -3.174 1.026 -3.164 -3.969 1.105 -3.397 -3.261 2.332 -3.728 0.996 1.607 -3.257 -0.844 -2.154 ML 177 175 6 180 6 1 1 22 41 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 178 175 6 180 6 1 1 22 41 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 179 175 6 180 6 0 0 20 39 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 180 180 5 180 6 1 1 22 41 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 181 181 6 181 5 1 1 22 41 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 49 ] 22 28 g c - - MP 182 181 6 186 4 2 2 21 39 -7.179 -7.386 -0.045 -5.800 -3.562 -2.777 -3.543 0.815 -3.393 -4.211 1.036 -3.690 -3.622 2.806 -4.038 -0.521 1.605 -3.589 -0.977 -2.472 ML 183 181 6 186 4 1 1 22 40 -3.758 -3.940 -0.507 -2.670 0.368 -0.385 -0.191 0.094 MR 184 181 6 186 4 1 1 21 40 -4.809 -3.838 -1.706 -0.766 0.368 -0.385 -0.191 0.094 D 185 181 6 186 4 0 0 20 39 -4.568 -4.250 -2.265 -0.520 IL 186 186 5 186 4 1 1 23 42 -1.686 -2.369 -1.117 -4.855 0.000 0.000 0.000 0.000 IR 187 187 6 187 3 1 1 22 41 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 50 ] 23 - G - - - ML 188 187 6 190 3 1 1 17 36 -8.180 -0.018 -6.834 0.288 -1.752 1.027 -1.170 D 189 187 6 190 3 0 0 17 36 -6.174 -1.687 -0.566 IL 190 190 3 190 3 1 1 21 39 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 51 ] 24 - u - - - ML 191 190 3 193 3 1 1 16 35 -8.180 -0.018 -6.834 0.315 0.011 -1.109 0.362 D 192 190 3 193 3 0 0 16 34 -6.174 -1.687 -0.566 IL 193 193 3 193 3 1 1 20 38 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 52 ] 25 - u - - - ML 194 193 3 196 3 1 1 15 33 -8.180 -0.018 -6.834 -0.524 -1.009 -0.026 0.868 D 195 193 3 196 3 0 0 15 33 -6.174 -1.687 -0.566 IL 196 196 3 196 3 1 1 19 37 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 53 ] 26 - A - - - ML 197 196 3 199 3 1 1 13 31 -8.180 -0.018 -6.834 1.798 -2.809 -2.398 -2.396 D 198 196 3 199 3 0 0 13 32 -6.174 -1.687 -0.566 IL 199 199 3 199 3 1 1 18 36 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 54 ] 27 - g - - - ML 200 199 3 202 2 1 1 1 1 * 0.000 0.413 -1.697 0.924 -1.114 D 201 199 3 202 2 0 0 0 0 * 0.000 IL 202 202 3 202 2 1 1 13 28 -1.823 -0.479 0.000 0.000 0.000 0.000 [ END 55 ] - - - - - - E 203 202 3 -1 0 0 0 0 0 [ BEGR 56 ] - - - - - - S 204 162 1 205 3 0 0 45 80 -8.180 -0.018 -6.834 IL 205 205 2 205 3 1 1 47 81 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 57 ] 32 - a - - - ML 206 205 2 208 5 1 1 45 80 -2.381 -0.338 -7.099 -7.311 -8.202 0.887 -1.040 -1.180 0.291 D 207 205 2 208 5 0 0 41 75 -4.959 -0.803 -4.221 -2.596 -2.508 IL 208 208 3 208 5 1 1 47 82 -0.777 -1.373 -5.842 -7.674 -6.948 0.000 0.000 0.000 0.000 [ MATP 58 ] 37 53 u a - - MP 209 208 3 213 6 2 2 31 50 -9.200 -9.139 -0.020 -7.916 -8.195 -8.591 -3.210 -2.939 -3.263 1.764 -2.744 -4.088 1.530 -3.215 -3.257 1.004 -3.756 -0.818 2.398 -3.473 -0.462 -2.200 ML 210 208 3 213 6 1 1 30 49 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 211 208 3 213 6 1 1 30 49 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 212 208 3 213 6 0 0 27 46 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 213 213 5 213 6 1 1 31 50 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 214 214 6 214 5 1 1 31 49 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 59 ] 38 52 g c - - MP 215 214 6 219 6 2 2 29 48 -9.200 -9.139 -0.020 -7.916 -8.195 -8.591 -3.183 -2.529 -3.232 0.995 -3.155 -3.979 1.841 -3.416 -3.302 2.317 -3.747 0.968 0.812 -3.298 -0.802 -2.187 ML 216 214 6 219 6 1 1 28 47 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 217 214 6 219 6 1 1 28 47 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 218 214 6 219 6 0 0 26 45 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 219 219 5 219 6 1 1 29 48 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 220 220 6 220 5 1 1 29 48 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 60 ] 39 51 G C - - MP 221 220 6 225 6 2 2 27 46 -9.200 -9.139 -0.020 -7.916 -8.195 -8.591 -3.885 -2.674 -3.885 1.850 -4.522 -4.571 0.033 -4.240 -3.878 3.121 -4.290 -0.287 -0.262 -3.913 -1.946 -2.781 ML 222 220 6 225 6 1 1 27 46 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 223 220 6 225 6 1 1 26 45 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 224 220 6 225 6 0 0 25 44 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 225 225 5 225 6 1 1 27 46 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 226 226 6 226 5 1 1 27 46 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 61 ] 40 50 G C - - MP 227 226 6 231 4 2 2 25 44 -7.179 -7.386 -0.045 -5.800 -5.165 -3.299 -5.316 -0.090 -5.826 -4.854 -1.085 -5.580 -4.593 3.725 -4.902 -1.017 -1.460 -4.742 -3.147 -4.187 ML 228 226 6 231 4 1 1 26 45 -3.758 -3.940 -0.507 -2.670 0.368 -0.385 -0.191 0.094 MR 229 226 6 231 4 1 1 25 45 -4.809 -3.838 -1.706 -0.766 0.368 -0.385 -0.191 0.094 D 230 226 6 231 4 0 0 24 44 -4.568 -4.250 -2.265 -0.520 IL 231 231 5 231 4 1 1 27 46 -1.686 -2.369 -1.117 -4.855 0.000 0.000 0.000 0.000 IR 232 232 6 232 3 1 1 26 45 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 62 ] 41 - U - - - ML 233 232 6 235 5 1 1 22 41 -7.283 -0.034 -7.099 -7.311 -8.202 -0.914 0.189 -1.692 1.014 D 234 232 6 235 5 0 0 21 40 -4.959 -0.803 -4.221 -2.596 -2.508 IL 235 235 3 235 5 1 1 23 42 -2.408 -0.496 -4.087 -5.920 -5.193 0.000 0.000 0.000 0.000 [ MATP 63 ] 42 49 g c - - MP 236 235 3 240 6 2 2 21 40 -9.200 -9.139 -0.020 -7.916 -8.195 -8.591 0.216 -2.248 -2.475 1.015 -2.367 -3.300 1.401 -2.728 -2.544 1.918 -3.076 -0.462 1.707 -2.599 -0.344 -1.613 ML 237 235 3 240 6 1 1 21 40 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 238 235 3 240 6 1 1 21 40 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 239 235 3 240 6 0 0 19 38 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 240 240 5 240 6 1 1 21 40 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 241 241 6 241 5 1 1 21 40 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 64 ] 43 48 u a - - MP 242 241 6 246 4 2 2 19 38 -7.179 -7.386 -0.045 -5.800 -2.313 -2.420 -2.451 0.757 -2.156 -3.250 1.612 -2.619 -2.502 0.851 -3.035 -0.841 1.834 0.447 1.183 -1.604 ML 243 241 6 246 4 1 1 21 39 -3.758 -3.940 -0.507 -2.670 0.368 -0.385 -0.191 0.094 MR 244 241 6 246 4 1 1 20 39 -4.809 -3.838 -1.706 -0.766 0.368 -0.385 -0.191 0.094 D 245 241 6 246 4 0 0 19 38 -4.568 -4.250 -2.265 -0.520 IL 246 246 5 246 4 1 1 22 41 -1.686 -2.369 -1.117 -4.855 0.000 0.000 0.000 0.000 IR 247 247 6 247 3 1 1 21 39 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 65 ] 44 - G - - - ML 248 247 6 250 3 1 1 16 35 -8.180 -0.018 -6.834 -2.034 -3.319 1.808 -2.706 D 249 247 6 250 3 0 0 16 34 -6.174 -1.687 -0.566 IL 250 250 3 250 3 1 1 20 38 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 66 ] 45 - A - - - ML 251 250 3 253 3 1 1 15 33 -8.180 -0.018 -6.834 1.026 -1.592 0.191 -1.030 D 252 250 3 253 3 0 0 15 33 -6.174 -1.687 -0.566 IL 253 253 3 253 3 1 1 19 37 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 67 ] 46 - C - - - ML 254 253 3 256 3 1 1 13 31 -8.180 -0.018 -6.834 -2.271 1.741 -3.102 -1.579 D 255 253 3 256 3 0 0 13 32 -6.174 -1.687 -0.566 IL 256 256 3 256 3 1 1 18 36 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 68 ] 47 - g - - - ML 257 256 3 259 2 1 1 1 1 * 0.000 0.413 -1.697 0.924 -1.114 D 258 256 3 259 2 0 0 0 0 * 0.000 IL 259 259 3 259 2 1 1 13 28 -1.823 -0.479 0.000 0.000 0.000 0.000 [ END 69 ] - - - - - - E 260 259 3 -1 0 0 0 0 0 // HMMER3/f [3.4 | Aug 2023] NAME Flavi_NKV_xrRNA ACC RF03539 DESC No-known vector Flavivirus exoribonuclease-resistant RNA element LENG 84 MAXL 175 ALPH RNA RF no MM no CONS yes CS yes MAP yes DATE Fri Jul 12 14:12:28 2024 COM [1] /hps/software/users/agb/rfam/bin/cmbuild -F CM SEED COM [2] /hps/software/users/agb/rfam/bin/cmcalibrate --cpu 8 /nfs/production/agb/rfam/15/rescan/families/RF03539/CM NSEQ 3 EFFN 2.463867 CKSUM 244307778 STATS LOCAL MSV -9.1448 0.73145 STATS LOCAL VITERBI -10.6576 0.73145 STATS LOCAL FORWARD -2.8386 0.73145 HMM A C G U m->m m->i m->d i->m i->i d->m d->d COMPO 1.37579 1.42642 1.31553 1.43188 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 0.00000 * 1 1.45310 1.80227 1.03228 1.40635 1 g - - ( 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 2 1.03510 2.32253 0.83971 2.16329 2 g - - ( 1.38629 1.38629 1.38629 1.38629 0.28416 3.95124 1.47787 1.46634 0.26236 1.09861 0.40547 3 1.90328 1.17909 1.08105 1.58903 3 g - - ( 1.38629 1.38629 1.38629 1.38629 0.04984 3.71692 3.71692 1.46634 0.26236 0.15581 1.93604 4 2.01610 1.99638 0.66846 1.52097 4 G - - ( 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 5 1.48367 1.76771 1.07321 1.34490 5 g - - ( 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 6 1.79801 2.28754 0.74355 1.35700 6 g - - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 7 2.66492 2.61956 3.18450 0.20314 7 U - - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 8 1.87540 1.43032 0.82470 1.77724 8 g - - ( 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 9 0.32155 2.83172 1.88074 2.75536 9 A - - ( 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 10 2.61189 3.28603 0.16342 3.21975 10 G - - ( 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 11 2.61539 3.29029 0.16265 3.22562 11 G - - ( 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 12 2.07892 1.38910 0.74283 1.89801 12 g - - ( 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 13 2.91730 0.18764 3.49361 2.44623 13 C - - , 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 14 0.14544 3.29779 3.01616 3.00770 14 A - - , 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 15 0.14544 3.29779 3.01616 3.00770 15 A - - , 1.38629 1.38629 1.38629 1.38629 0.28416 3.95124 1.47787 1.46634 0.26236 1.09861 0.40547 16 2.35696 0.33428 2.91835 1.99938 16 C - - , 1.38629 1.38629 1.38629 1.38629 0.04984 3.71692 3.71692 1.46634 0.26236 2.62918 0.07487 17 1.79778 1.10784 2.32684 0.90027 17 u - - , 1.38629 1.38629 1.38629 1.38629 0.04984 3.71692 3.71692 1.46634 0.26236 2.62918 0.07487 18 0.97863 1.23964 2.09330 1.55397 18 a - - , 1.38629 1.38629 1.38629 1.38629 0.04984 3.71692 3.71692 1.46634 0.26236 0.15581 1.93604 19 2.02355 1.99427 0.66908 1.51631 19 G - - < 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 20 1.45729 1.80743 1.02327 1.41206 20 g - - < 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 21 1.86500 1.87504 0.80728 1.40370 21 g - - < 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 22 2.01911 1.93272 0.72572 1.43339 22 g - - < 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 23 1.18632 2.58233 0.68162 2.17805 23 G - - _ 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 24 1.16917 1.38155 2.14741 1.13507 24 u - - _ 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 25 1.73886 2.07476 1.40673 0.79021 25 u - - _ 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 26 0.14544 3.29779 3.01616 3.00770 26 A - - _ 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 27 1.10056 2.54466 0.75260 2.13981 27 g - - _ 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 28 1.57443 0.80082 1.76086 1.76017 28 c - - > 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 29 1.55308 1.09685 1.69698 1.30472 29 c - - > 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 30 1.57161 1.13670 1.63131 1.28830 30 c - - > 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 31 1.66021 0.74310 1.82019 1.75872 31 c - - > 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 32 0.77634 2.09721 2.19405 1.18531 32 a - - , 1.38629 1.38629 1.38629 1.38629 0.28416 1.47787 3.95124 1.39065 0.28624 1.09861 0.40547 33 1.45350 1.59963 1.74146 0.94414 37 u - - < 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 34 1.88288 1.42897 0.82132 1.78115 38 g - - < 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 35 1.41303 2.58362 0.51784 2.46170 39 G - - < 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 36 2.62003 3.29591 0.16165 3.23339 40 G - - < 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 37 2.00405 1.25853 2.54209 0.68828 41 U - - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 38 1.49743 1.63910 1.20851 1.26055 42 g - - < 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 39 1.93155 1.50083 1.77585 0.77048 43 u - - < 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 40 2.76027 3.64623 0.13841 3.22157 44 G - - _ 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 41 0.68011 2.47226 1.25762 2.08174 45 A - - _ 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 42 2.91730 0.18764 3.49361 2.44623 46 C - - _ 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 43 1.10056 2.54466 0.75260 2.13981 47 g - - _ 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 44 1.34568 1.53425 1.05127 1.74569 48 g - - > 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 45 1.21239 1.32940 1.45130 1.59154 49 a - - > 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 46 3.43614 0.19112 3.13423 2.32026 50 C - - > 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 47 2.70027 0.59047 2.39982 1.24476 51 C - - > 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 48 2.01667 1.10652 1.30837 1.32450 52 c - - > 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 49 1.05459 1.92705 1.43101 1.32043 53 a - - > 1.38629 1.38629 1.38629 1.38629 0.28416 1.47787 3.95124 1.12161 0.39416 1.09861 0.40547 50 2.14238 0.81286 1.28226 1.82246 57 c - - ) 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 51 3.42510 0.19207 3.12928 2.31816 58 C - - ) 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 52 3.42459 0.19211 3.12905 2.31806 59 C - - ) 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 53 2.98973 2.18282 2.65149 0.26601 60 U - - ) 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 54 2.01446 1.10717 1.30866 1.32450 61 c - - ) 1.38629 1.38629 1.38629 1.38629 0.25269 3.95124 1.58935 1.46634 0.26236 1.09861 0.40547 55 1.82326 1.04661 2.35798 0.93454 62 u - - - 1.38629 1.38629 1.38629 1.38629 0.04833 3.74689 3.74689 1.46634 0.26236 2.53457 0.08262 56 0.86957 2.28931 1.11735 1.88132 63 a - - - 1.38629 1.38629 1.38629 1.38629 0.04833 3.74689 3.74689 1.46634 0.26236 0.17268 1.84143 57 1.87008 1.01071 1.29227 1.57368 64 c - - ) 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 58 1.65229 0.75122 1.81730 1.74791 65 c - - ) 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 59 1.84184 1.44164 1.13532 1.26013 66 g - - ) 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 60 2.40049 0.71392 2.13209 1.20059 67 c - - ) 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 61 1.56613 1.14178 1.62805 1.28886 68 c - - ) 1.38629 1.38629 1.38629 1.38629 0.25060 3.95124 1.59735 1.46634 0.26236 1.09861 0.40547 62 0.97271 1.94944 2.07776 1.03739 69 a - - : 1.38629 1.38629 1.38629 1.38629 0.04823 3.74888 3.74888 1.46634 0.26236 0.17395 1.83470 63 1.73886 2.07476 1.40673 0.79021 70 u - - : 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 64 1.20551 2.03747 2.24264 0.76804 71 u - - : 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 65 2.76027 3.64624 0.13841 3.22157 72 G - - : 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 66 1.73886 2.07476 1.40673 0.79021 73 u - - : 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 67 0.68011 2.47226 1.25762 2.08174 74 A - - : 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 68 0.14544 3.29779 3.01616 3.00770 75 A - - : 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 69 0.68011 2.47226 1.25762 2.08174 76 A - - : 1.38629 1.38629 1.38629 1.38629 0.28416 3.95124 1.47787 1.46634 0.26236 1.09861 0.40547 70 2.23655 2.26631 2.73478 0.32217 77 U - - : 1.38629 1.38629 1.38629 1.38629 0.04984 3.71692 3.71692 1.46634 0.26236 2.62918 0.07487 71 0.24313 2.83185 2.59668 2.49608 78 A - - : 1.38629 1.38629 1.38629 1.38629 0.04984 3.71692 3.71692 1.46634 0.26236 2.62918 0.07487 72 0.97308 1.24642 2.09234 1.55518 79 a - - : 1.38629 1.38629 1.38629 1.38629 0.04984 3.71692 3.71692 1.46634 0.26236 2.62918 0.07487 73 2.23655 2.26631 2.73478 0.32217 80 U - - : 1.38629 1.38629 1.38629 1.38629 0.04984 3.71692 3.71692 1.46634 0.26236 2.62918 0.07487 74 2.23655 2.26631 2.73478 0.32217 81 U - - : 1.38629 1.38629 1.38629 1.38629 0.04984 3.71692 3.71692 1.46634 0.26236 2.62918 0.07487 75 1.59221 1.98636 1.18315 1.04124 82 u - - : 1.38629 1.38629 1.38629 1.38629 0.04984 3.71692 3.71692 1.46634 0.26236 2.62918 0.07487 76 0.91445 2.27015 1.07811 1.85965 83 a - - : 1.38629 1.38629 1.38629 1.38629 0.04984 3.71692 3.71692 1.46634 0.26236 2.62918 0.07487 77 2.27014 3.08069 0.24790 2.65444 84 G - - : 1.38629 1.38629 1.38629 1.38629 0.04984 3.71692 3.71692 1.46634 0.26236 2.62918 0.07487 78 2.35696 0.33428 2.91835 1.99938 85 C - - : 1.38629 1.38629 1.38629 1.38629 0.04984 3.71692 3.71692 1.46634 0.26236 2.62918 0.07487 79 2.35696 0.33428 2.91835 1.99938 86 C - - : 1.38629 1.38629 1.38629 1.38629 0.04984 3.71692 3.71692 1.46634 0.26236 0.15581 1.93604 80 0.14544 3.29779 3.01616 3.00770 87 A - - : 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 81 1.73218 1.49583 0.83660 1.79662 88 g - - : 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 82 2.66492 2.61956 3.18450 0.20314 89 U - - : 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 83 1.75785 0.93014 1.40557 1.67207 90 c - - : 1.38629 1.38629 1.38629 1.38629 0.25060 3.95124 1.59735 1.46634 0.26236 1.09861 0.40547 84 0.22659 2.89436 2.65290 2.56428 91 A - - : 1.38629 1.38629 1.38629 1.38629 0.02441 3.72505 * 1.46634 0.26236 0.00000 * //