INFERNAL1/a [1.1.5 | Sep 2023] NAME mir-4703 ACC RF03523 DESC mir-4703 microRNA precursor family STATES 187 NODES 38 CLEN 61 W 76 ALPH RNA RF no CONS yes MAP yes DATE Tue Jul 2 12:00:35 2024 COM [1] /hps/software/users/agb/rfam/bin/cmbuild -F CM SEED COM [2] /hps/software/users/agb/rfam/bin/cmcalibrate --cpu 8 /nfs/production/agb/rfam/15/rescan/RF03523/CM PBEGIN 0.05 PEND 0.05 WBETA 1e-07 QDBBETA1 1e-07 QDBBETA2 1e-15 N2OMEGA 1.52588e-05 N3OMEGA 1.52588e-05 ELSELF -0.08926734 NSEQ 2 EFFN 1.597656 CKSUM 2618064112 NULL 0.000 0.000 0.000 0.000 GA 88.00 TC 88.10 NC 73.20 EFP7GF -5.4417 0.72681 ECMLC 0.66571 -4.61354 3.87960 1600000 342506 0.003504 ECMGC 0.44734 -15.55478 -1.04564 1600000 263556 0.001518 ECMLI 0.64157 -3.45118 4.86377 1600000 248872 0.004822 ECMGI 0.51246 -9.73860 1.93730 1600000 158726 0.002520 CM [ ROOT 0 ] - - - - - - S 0 -1 0 1 4 1 1 76 95 -6.734 -7.979 -0.089 -4.433 IL 1 1 2 1 4 1 1 77 96 -2.817 -4.319 -0.613 -2.698 0.000 0.000 0.000 0.000 IR 2 2 3 2 3 1 1 78 97 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 1 ] - 61 - U - - MR 3 2 3 5 3 1 2 76 95 -8.232 -0.020 -6.549 -1.246 -1.285 -1.966 1.542 D 4 2 3 5 3 0 0 74 93 -6.390 -1.568 -0.620 IR 5 5 3 5 3 1 1 77 96 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 2 ] - 60 - C - - MR 6 5 3 8 5 1 2 75 94 -6.979 -0.042 -6.794 -7.006 -7.898 -1.426 1.527 -2.237 -0.905 D 7 5 3 8 5 0 0 74 93 -5.352 -0.707 -2.978 -4.409 -2.404 IR 8 8 3 8 5 1 1 75 94 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 3 ] 1 59 U A - - MP 9 8 3 13 6 2 3 74 93 -9.055 -8.994 -0.022 -7.770 -8.050 -8.445 -3.923 -3.738 -3.789 -0.053 -2.791 -4.378 1.530 -3.467 -3.797 0.245 -4.184 -1.645 3.183 -4.083 -0.474 -2.647 ML 10 8 3 13 6 1 1 72 92 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 11 8 3 13 6 1 1 72 91 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 12 8 3 13 6 0 0 70 89 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 13 13 5 13 6 1 1 74 93 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 14 14 6 14 5 1 1 73 92 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 4 ] 2 58 g c - - MP 15 14 6 19 6 2 3 72 91 -9.055 -8.994 -0.022 -7.770 -8.050 -8.445 -3.309 0.899 -3.399 1.010 -3.750 -4.080 0.410 -3.704 -3.353 2.920 -3.794 -0.148 0.131 -3.453 -1.452 -2.375 ML 16 14 6 19 6 1 1 70 90 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 17 14 6 19 6 1 1 70 89 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 18 14 6 19 6 0 0 68 87 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 19 19 5 19 6 1 1 72 91 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 20 20 6 20 5 1 1 71 90 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 5 ] 3 57 G C - - MP 21 20 6 25 6 2 2 70 89 -9.055 -8.994 -0.022 -7.770 -8.050 -8.445 -4.487 -2.974 -4.566 0.367 -4.874 -4.592 -0.301 -4.788 -4.157 3.571 -4.513 -0.665 -0.694 -4.300 -2.325 -3.447 ML 22 20 6 25 6 1 1 68 88 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 23 20 6 25 6 1 1 68 87 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 24 20 6 25 6 0 0 66 85 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 25 25 5 25 6 1 1 70 89 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 26 26 6 26 5 1 1 69 88 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 6 ] 4 56 C G - - MP 27 26 6 31 6 2 2 68 87 -9.055 -8.994 -0.022 -7.770 -8.050 -8.445 -4.286 -4.167 -4.019 -0.425 -2.798 -4.465 3.460 -3.581 -4.061 -0.143 -4.349 -2.111 0.741 -4.372 -0.499 -2.910 ML 28 26 6 31 6 1 1 66 86 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 29 26 6 31 6 1 1 66 85 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 30 26 6 31 6 0 0 64 83 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 31 31 5 31 6 1 1 68 87 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 32 32 6 32 5 1 1 67 86 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 7 ] 5 55 A U - - MP 33 32 6 37 6 2 2 66 85 -9.055 -8.994 -0.022 -7.770 -8.050 -8.445 -3.581 -2.668 -3.613 3.175 -3.848 -4.894 0.438 -3.668 -3.515 1.307 -4.052 -0.181 0.020 -4.116 -1.504 -2.461 ML 34 32 6 37 6 1 1 64 84 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 35 32 6 37 6 1 1 64 83 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 36 32 6 37 6 0 0 62 81 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 37 37 5 37 6 1 1 66 85 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 38 38 6 38 5 1 1 65 84 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 8 ] 6 54 A U - - MP 39 38 6 43 6 2 2 64 83 -9.055 -8.994 -0.022 -7.770 -8.050 -8.445 -3.581 -2.668 -3.613 3.175 -3.848 -4.894 0.438 -3.668 -3.515 1.307 -4.052 -0.181 0.020 -4.116 -1.504 -2.461 ML 40 38 6 43 6 1 1 62 82 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 41 38 6 43 6 1 1 62 81 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 42 38 6 43 6 0 0 60 79 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 43 43 5 43 6 1 1 64 83 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 44 44 6 44 5 1 1 63 82 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 9 ] 7 53 U A - - MP 45 44 6 49 6 2 2 62 81 -9.055 -8.994 -0.022 -7.770 -8.050 -8.445 -3.923 -3.738 -3.789 -0.053 -2.791 -4.378 1.530 -3.467 -3.797 0.245 -4.184 -1.645 3.183 -4.083 -0.474 -2.647 ML 46 44 6 49 6 1 1 60 80 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 47 44 6 49 6 1 1 60 79 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 48 44 6 49 6 0 0 58 77 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 49 49 5 49 6 1 1 62 81 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 50 50 6 50 5 1 1 61 80 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 10 ] 8 52 A U - - MP 51 50 6 55 6 2 2 60 79 -9.055 -8.994 -0.022 -7.770 -8.050 -8.445 -3.581 -2.668 -3.613 3.175 -3.848 -4.894 0.438 -3.668 -3.515 1.307 -4.052 -0.181 0.020 -4.116 -1.504 -2.461 ML 52 50 6 55 6 1 1 58 78 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 53 50 6 55 6 1 1 58 77 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 54 50 6 55 6 0 0 56 75 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 55 55 5 55 6 1 1 59 79 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 56 56 6 56 5 1 1 59 78 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 11 ] 9 51 C G - - MP 57 56 6 61 6 2 2 58 77 -9.055 -8.994 -0.022 -7.770 -8.050 -8.445 -4.286 -4.167 -4.019 -0.425 -2.798 -4.465 3.460 -3.581 -4.061 -0.143 -4.349 -2.111 0.741 -4.372 -0.499 -2.910 ML 58 56 6 61 6 1 1 56 76 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 59 56 6 61 6 1 1 56 75 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 60 56 6 61 6 0 0 54 73 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 61 61 5 61 6 1 1 57 77 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 62 62 6 62 5 1 1 57 76 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 12 ] 10 50 A U - - MP 63 62 6 67 6 2 2 56 75 -9.055 -8.994 -0.022 -7.770 -8.050 -8.445 -3.581 -2.668 -3.613 3.175 -3.848 -4.894 0.438 -3.668 -3.515 1.307 -4.052 -0.181 0.020 -4.116 -1.504 -2.461 ML 64 62 6 67 6 1 1 54 73 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 65 62 6 67 6 1 1 54 73 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 66 62 6 67 6 0 0 52 71 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 67 67 5 67 6 1 1 55 75 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 68 68 6 68 5 1 1 55 74 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 13 ] 11 49 g c - - MP 69 68 6 73 6 2 2 54 73 -9.055 -8.994 -0.022 -7.770 -8.050 -8.445 -3.559 -2.452 -3.618 1.060 -4.135 -4.393 0.279 -3.896 -3.539 2.928 -3.986 1.519 -0.012 -3.727 -1.671 -2.506 ML 70 68 6 73 6 1 1 52 71 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 71 68 6 73 6 1 1 52 71 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 72 68 6 73 6 0 0 50 69 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 73 73 5 73 6 1 1 53 73 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 74 74 6 74 5 1 1 53 72 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 14 ] 12 48 U A - - MP 75 74 6 79 6 2 2 52 71 -9.055 -8.994 -0.022 -7.770 -8.050 -8.445 -3.923 -3.738 -3.789 -0.053 -2.791 -4.378 1.530 -3.467 -3.797 0.245 -4.184 -1.645 3.183 -4.083 -0.474 -2.647 ML 76 74 6 79 6 1 1 50 69 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 77 74 6 79 6 1 1 50 69 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 78 74 6 79 6 0 0 48 67 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 79 79 5 79 6 1 1 51 71 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 80 80 6 80 5 1 1 51 70 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 15 ] 13 47 A U - - MP 81 80 6 85 6 2 2 50 69 -9.055 -8.994 -0.022 -7.770 -8.050 -8.445 -3.581 -2.668 -3.613 3.175 -3.848 -4.894 0.438 -3.668 -3.515 1.307 -4.052 -0.181 0.020 -4.116 -1.504 -2.461 ML 82 80 6 85 6 1 1 48 68 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 83 80 6 85 6 1 1 48 67 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 84 80 6 85 6 0 0 46 65 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 85 85 5 85 6 1 1 49 69 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 86 86 6 86 5 1 1 49 68 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 16 ] 14 46 C G - - MP 87 86 6 91 6 2 2 48 67 -9.055 -8.994 -0.022 -7.770 -8.050 -8.445 -4.286 -4.167 -4.019 -0.425 -2.798 -4.465 3.460 -3.581 -4.061 -0.143 -4.349 -2.111 0.741 -4.372 -0.499 -2.910 ML 88 86 6 91 6 1 1 47 66 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 89 86 6 91 6 1 1 46 66 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 90 86 6 91 6 0 0 44 63 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 91 91 5 91 6 1 1 48 67 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 92 92 6 92 5 1 1 47 66 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 17 ] 15 45 A U - - MP 93 92 6 97 6 2 2 46 65 -9.055 -8.994 -0.022 -7.770 -8.050 -8.445 -3.581 -2.668 -3.613 3.175 -3.848 -4.894 0.438 -3.668 -3.515 1.307 -4.052 -0.181 0.020 -4.116 -1.504 -2.461 ML 94 92 6 97 6 1 1 45 64 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 95 92 6 97 6 1 1 45 64 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 96 92 6 97 6 0 0 43 62 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 97 97 5 97 6 1 1 46 65 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 98 98 6 98 5 1 1 45 64 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 18 ] 16 44 A U - - MP 99 98 6 103 4 2 2 44 63 -6.805 -7.012 -0.059 -5.426 -3.581 -2.668 -3.613 3.175 -3.848 -4.894 0.438 -3.668 -3.515 1.307 -4.052 -0.181 0.020 -4.116 -1.504 -2.461 ML 100 98 6 103 4 1 1 44 64 -3.758 -3.940 -0.507 -2.670 0.368 -0.385 -0.191 0.094 MR 101 98 6 103 4 1 1 44 63 -4.809 -3.838 -1.706 -0.766 0.368 -0.385 -0.191 0.094 D 102 98 6 103 4 0 0 43 62 -4.568 -4.250 -2.265 -0.520 IL 103 103 5 103 4 1 1 46 65 -1.686 -2.369 -1.117 -4.855 0.000 0.000 0.000 0.000 IR 104 104 6 104 3 1 1 45 64 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 19 ] 17 - A - - - ML 105 104 6 107 3 1 1 41 60 -8.232 -0.020 -6.549 1.655 -2.107 -1.766 -1.625 D 106 104 6 107 3 0 0 40 59 -5.620 -0.734 -1.403 IL 107 107 3 107 3 1 1 42 61 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 20 ] - 43 - G - - MR 108 107 3 110 5 1 1 40 59 -6.979 -0.042 -6.794 -7.006 -7.898 -1.298 -2.472 1.649 -1.857 D 109 107 3 110 5 0 0 39 58 -5.352 -0.707 -2.978 -4.409 -2.404 IR 110 110 3 110 5 1 1 40 59 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 21 ] 18 42 U A - - MP 111 110 3 115 6 2 2 39 58 -9.055 -8.994 -0.022 -7.770 -8.050 -8.445 -3.923 -3.738 -3.789 -0.053 -2.791 -4.378 1.530 -3.467 -3.797 0.245 -4.184 -1.645 3.183 -4.083 -0.474 -2.647 ML 112 110 3 115 6 1 1 38 57 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 113 110 3 115 6 1 1 38 56 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 114 110 3 115 6 0 0 35 54 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 115 115 5 115 6 1 1 39 58 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 116 116 6 116 5 1 1 38 57 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 22 ] 19 41 A U - - MP 117 116 6 121 6 2 2 37 56 -9.055 -8.994 -0.022 -7.770 -8.050 -8.445 -3.581 -2.668 -3.613 3.175 -3.848 -4.894 0.438 -3.668 -3.515 1.307 -4.052 -0.181 0.020 -4.116 -1.504 -2.461 ML 118 116 6 121 6 1 1 36 55 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 119 116 6 121 6 1 1 36 54 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 120 116 6 121 6 0 0 33 52 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 121 121 5 121 6 1 1 37 56 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 122 122 6 122 5 1 1 36 55 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 23 ] 20 40 c g - - MP 123 122 6 127 6 2 2 35 54 -9.055 -8.994 -0.022 -7.770 -8.050 -8.445 -3.551 -3.524 -3.418 0.125 -2.374 -3.962 2.671 -3.091 -3.447 0.366 -3.823 -1.593 1.219 -3.687 1.814 -2.343 ML 124 122 6 127 6 1 1 34 53 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 125 122 6 127 6 1 1 34 52 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 126 122 6 127 6 0 0 31 50 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 127 127 5 127 6 1 1 35 54 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 128 128 6 128 5 1 1 34 53 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 24 ] 21 39 A U - - MP 129 128 6 133 6 2 2 33 52 -9.055 -8.994 -0.022 -7.770 -8.050 -8.445 -3.581 -2.668 -3.613 3.175 -3.848 -4.894 0.438 -3.668 -3.515 1.307 -4.052 -0.181 0.020 -4.116 -1.504 -2.461 ML 130 128 6 133 6 1 1 32 51 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 131 128 6 133 6 1 1 32 50 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 132 128 6 133 6 0 0 29 48 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 133 133 5 133 6 1 1 33 52 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 134 134 6 134 5 1 1 32 51 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 25 ] 22 38 G C - - MP 135 134 6 139 6 2 2 31 50 -9.055 -8.994 -0.022 -7.770 -8.050 -8.445 -4.487 -2.974 -4.566 0.367 -4.874 -4.592 -0.301 -4.788 -4.157 3.571 -4.513 -0.665 -0.694 -4.300 -2.325 -3.447 ML 136 134 6 139 6 1 1 30 49 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 137 134 6 139 6 1 1 30 48 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 138 134 6 139 6 0 0 27 46 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 139 139 5 139 6 1 1 31 50 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 140 140 6 140 5 1 1 30 49 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 26 ] 23 37 U A - - MP 141 140 6 145 6 2 2 29 48 -9.055 -8.994 -0.022 -7.770 -8.050 -8.445 -3.923 -3.738 -3.789 -0.053 -2.791 -4.378 1.530 -3.467 -3.797 0.245 -4.184 -1.645 3.183 -4.083 -0.474 -2.647 ML 142 140 6 145 6 1 1 28 47 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 143 140 6 145 6 1 1 28 47 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 144 140 6 145 6 0 0 25 44 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 145 145 5 145 6 1 1 29 48 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 146 146 6 146 5 1 1 28 47 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 27 ] 24 36 G C - - MP 147 146 6 151 6 2 2 27 46 -9.055 -8.994 -0.022 -7.770 -8.050 -8.445 -4.487 -2.974 -4.566 0.367 -4.874 -4.592 -0.301 -4.788 -4.157 3.571 -4.513 -0.665 -0.694 -4.300 -2.325 -3.447 ML 148 146 6 151 6 1 1 26 45 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 149 146 6 151 6 1 1 26 45 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 150 146 6 151 6 0 0 24 43 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 151 151 5 151 6 1 1 27 46 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 152 152 6 152 5 1 1 26 45 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 28 ] 25 35 u g - - MP 153 152 6 157 6 2 2 25 44 -9.055 -8.994 -0.022 -7.770 -8.050 -8.445 -3.826 -3.735 -3.589 -0.097 -2.432 -4.058 1.846 -3.179 -3.627 0.143 -3.947 -1.745 1.037 -3.936 2.816 -2.512 ML 154 152 6 157 6 1 1 25 44 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 155 152 6 157 6 1 1 24 43 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 156 152 6 157 6 0 0 23 42 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 157 157 5 157 6 1 1 25 44 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 158 158 6 158 5 1 1 25 44 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 29 ] 26 34 g u - - MP 159 158 6 163 4 2 2 23 42 -6.805 -7.012 -0.059 -5.426 -3.453 -2.288 -3.605 1.229 -4.186 -4.916 0.175 -3.652 -3.314 1.578 -3.827 2.887 -0.186 -4.155 -1.765 -2.342 ML 160 158 6 163 4 1 1 24 43 -3.758 -3.940 -0.507 -2.670 0.368 -0.385 -0.191 0.094 MR 161 158 6 163 4 1 1 23 42 -4.809 -3.838 -1.706 -0.766 0.368 -0.385 -0.191 0.094 D 162 158 6 163 4 0 0 22 41 -4.568 -4.250 -2.265 -0.520 IL 163 163 5 163 4 1 1 25 44 -1.686 -2.369 -1.117 -4.855 0.000 0.000 0.000 0.000 IR 164 164 6 164 3 1 1 24 43 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 30 ] 27 - U - - - ML 165 164 6 167 3 1 1 20 39 -7.832 -0.023 -6.486 -1.246 -1.285 -1.966 1.542 D 166 164 6 167 3 0 0 19 38 -6.174 -1.687 -0.566 IL 167 167 3 167 3 1 1 23 42 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 31 ] 28 - U - - - ML 168 167 3 170 3 1 1 19 38 -7.832 -0.023 -6.486 -1.246 -1.285 -1.966 1.542 D 169 167 3 170 3 0 0 18 37 -6.174 -1.687 -0.566 IL 170 170 3 170 3 1 1 22 41 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 32 ] 29 - U - - - ML 171 170 3 173 3 1 1 18 36 -7.832 -0.023 -6.486 -1.246 -1.285 -1.966 1.542 D 172 170 3 173 3 0 0 17 36 -6.174 -1.687 -0.566 IL 173 173 3 173 3 1 1 21 40 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 33 ] 30 - G - - - ML 174 173 3 176 3 1 1 16 35 -7.832 -0.023 -6.486 -1.298 -2.472 1.649 -1.857 D 175 173 3 176 3 0 0 16 34 -6.174 -1.687 -0.566 IL 176 176 3 176 3 1 1 20 38 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 34 ] 31 - A - - - ML 177 176 3 179 3 1 1 15 33 -7.832 -0.023 -6.486 1.655 -2.107 -1.766 -1.625 D 178 176 3 179 3 0 0 15 33 -6.174 -1.687 -0.566 IL 179 179 3 179 3 1 1 19 37 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 35 ] 32 - U - - - ML 180 179 3 182 3 1 1 13 32 -7.832 -0.023 -6.486 -1.246 -1.285 -1.966 1.542 D 181 179 3 182 3 0 0 13 32 -6.174 -1.687 -0.566 IL 182 182 3 182 3 1 1 18 36 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 36 ] 33 - U - - - ML 183 182 3 185 2 1 1 1 1 * 0.000 -1.246 -1.285 -1.966 1.542 D 184 182 3 185 2 0 0 0 0 * 0.000 IL 185 185 3 185 2 1 1 13 28 -1.823 -0.479 0.000 0.000 0.000 0.000 [ END 37 ] - - - - - - E 186 185 3 -1 0 0 0 0 0 // HMMER3/f [3.4 | Aug 2023] NAME mir-4703 ACC RF03523 DESC mir-4703 microRNA precursor family LENG 61 MAXL 148 ALPH RNA RF no MM no CONS yes CS yes MAP yes DATE Tue Jul 2 12:00:35 2024 COM [1] /hps/software/users/agb/rfam/bin/cmbuild -F CM SEED COM [2] /hps/software/users/agb/rfam/bin/cmcalibrate --cpu 8 /nfs/production/agb/rfam/15/rescan/RF03523/CM NSEQ 2 EFFN 1.917969 CKSUM 2618064112 STATS LOCAL MSV -8.7366 0.72681 STATS LOCAL VITERBI -9.1521 0.72681 STATS LOCAL FORWARD -3.3111 0.72681 HMM A C G U m->m m->i m->d i->m i->i d->m d->d COMPO 1.43698 1.60094 1.39564 1.16163 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 0.00000 * 1 2.73109 1.73636 2.45977 0.39566 1 U - - < 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 2 1.32532 2.45893 0.59616 2.32449 2 G - - < 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 3 2.44698 3.01488 0.20769 2.95775 3 G - - < 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 4 2.97935 0.29968 2.72715 1.94693 4 C - - < 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 5 0.44212 2.52018 1.65254 2.46136 5 A - - < 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 6 0.44214 2.52010 1.65254 2.46125 6 A - - < 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 7 2.73898 1.73653 2.46288 0.39446 7 U - - < 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 8 0.44222 2.51990 1.65252 2.46093 8 A - - < 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 9 2.97800 0.29987 2.72655 1.94671 9 C - - < 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 10 0.44228 2.51972 1.65250 2.46066 10 A - - < 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 11 1.92029 2.55226 0.37597 2.42018 11 G - - < 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 12 2.73778 1.73651 2.46241 0.39464 12 U - - < 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 13 0.44235 2.51954 1.65248 2.46038 13 A - - < 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 14 2.97681 0.30003 2.72603 1.94652 14 C - - < 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 15 0.44238 2.51946 1.65247 2.46026 15 A - - < 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 16 0.44239 2.51944 1.65247 2.46022 16 A - - < 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 17 0.19610 3.02411 2.76959 2.70635 17 A - - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 18 2.73696 1.73649 2.46209 0.39476 18 U - - < 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 19 0.44206 2.52033 1.65256 2.46159 19 A - - < 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 20 2.54831 0.84330 2.31178 0.93543 20 c - - < 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 21 0.44195 2.52065 1.65259 2.46209 21 A - - < 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 22 2.44821 3.01620 0.20736 2.95962 22 G - - < 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 23 2.74003 1.73656 2.46330 0.39430 23 U - - < 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 24 2.44758 3.01552 0.20753 2.95866 24 G - - < 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 25 2.74175 1.47597 2.50546 0.46945 25 U - - < 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 26 1.82697 2.67675 0.36638 2.56296 26 G - - < 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 27 2.41060 2.40905 2.91885 0.26613 27 U - - _ 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 28 2.41060 2.40905 2.91885 0.26613 28 U - - _ 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 29 2.41060 2.40905 2.91885 0.26613 29 U - - _ 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 30 2.47554 3.32031 0.19303 2.89522 30 G - - _ 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 31 0.19610 3.02411 2.76959 2.70635 31 A - - _ 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 32 2.41060 2.40905 2.91885 0.26613 32 U - - _ 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 33 2.41060 2.40905 2.91885 0.26613 33 U - - _ 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 34 2.77768 1.72864 2.48003 0.39075 34 U - - > 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 35 1.98928 2.67905 0.34015 2.48994 35 G - - > 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 36 3.16991 0.24388 2.84693 2.15085 36 C - - > 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 37 0.44817 2.64323 1.57338 2.49217 37 A - - > 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 38 3.17263 0.24357 2.84806 2.15137 38 C - - > 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 39 2.69311 1.92240 2.33524 0.37210 39 U - - > 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 40 1.84267 2.47382 0.41742 2.31668 40 G - - > 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 41 2.69608 1.92264 2.33624 0.37161 41 U - - > 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 42 0.44725 2.64638 1.57348 2.49631 42 A - - > 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 43 2.47554 3.32031 0.19303 2.89522 43 G - - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 44 2.68787 1.92197 2.33348 0.37295 44 U - - > 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 45 2.68796 1.92197 2.33351 0.37294 45 U - - > 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 46 2.22054 2.89255 0.25988 2.73537 46 G - - > 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 47 2.68821 1.92199 2.33360 0.37290 47 U - - > 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 48 0.44855 2.64195 1.57333 2.49049 48 A - - > 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 49 2.64761 0.68981 2.36418 1.09816 49 C - - > 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 50 2.68882 1.92204 2.33380 0.37280 50 U - - > 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 51 2.22109 2.89324 0.25968 2.73624 51 G - - > 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 52 2.68949 1.92210 2.33403 0.37269 52 U - - > 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 53 0.44834 2.64266 1.57336 2.49141 53 A - - > 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 54 2.69049 1.92218 2.33436 0.37252 54 U - - > 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 55 2.69118 1.92224 2.33459 0.37241 55 U - - > 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 56 2.22262 2.89515 0.25912 2.73865 56 G - - > 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 57 3.17447 0.24336 2.84882 2.15173 57 C - - > 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 58 2.55728 0.46077 2.27216 1.66815 58 C - - > 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 59 0.44752 2.64547 1.57345 2.49511 59 A - - > 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 60 2.58597 0.26242 3.15679 2.18104 60 C - - : 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 61 2.41060 2.40905 2.91885 0.26613 61 U - - : 1.38629 1.38629 1.38629 1.38629 0.02469 3.71357 * 1.46634 0.26236 0.00000 * //