INFERNAL1/a [1.1.5 | Sep 2023] NAME mir-9128 ACC RF03505 DESC mir-9128 microRNA precursor family STATES 289 NODES 64 CLEN 95 W 113 ALPH RNA RF no CONS yes MAP yes DATE Fri Jul 12 22:03:43 2024 COM [1] /hps/software/users/agb/rfam/bin/cmbuild -F CM SEED COM [2] /hps/software/users/agb/rfam/bin/cmcalibrate --cpu 8 /nfs/production/agb/rfam/15/rescan/families/RF03505/CM PBEGIN 0.05 PEND 0.05 WBETA 1e-07 QDBBETA1 1e-07 QDBBETA2 1e-15 N2OMEGA 1.52588e-05 N3OMEGA 1.52588e-05 ELSELF -0.08926734 NSEQ 2 EFFN 0.550781 CKSUM 4142311913 NULL 0.000 0.000 0.000 0.000 GA 53.00 TC 53.50 NC 52.30 EFP7GF -4.9805 0.71888 ECMLC 0.60600 -6.22482 2.77659 1600000 280678 0.004275 ECMGC 0.37758 -14.76966 -2.58722 1600000 39789 0.010053 ECMLI 0.54594 -4.68252 4.86796 1600000 220596 0.005440 ECMGI 0.39575 -9.19575 2.14570 1600000 35592 0.011238 CM [ ROOT 0 ] - - - - - - S 0 -1 0 1 4 1 1 113 134 -6.221 -7.467 -0.128 -3.920 IL 1 1 2 1 4 7 42 115 136 -2.817 -4.319 -0.613 -2.698 0.000 0.000 0.000 0.000 IR 2 2 3 2 3 8 43 115 136 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 1 ] - 95 - U - - MR 3 2 3 5 3 8 43 113 134 -7.756 -0.028 -6.074 -0.398 -0.630 -1.041 1.076 D 4 2 3 5 3 3 38 112 133 -6.390 -1.568 -0.620 IR 5 5 3 5 3 7 42 114 135 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 2 ] - 94 - U - - MR 6 5 3 8 5 8 42 112 133 -6.543 -0.058 -6.358 -6.570 -7.462 -0.398 -0.630 -1.041 1.076 D 7 5 3 8 5 3 38 111 132 -5.352 -0.707 -2.978 -4.409 -2.404 IR 8 8 3 8 5 6 41 113 134 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 3 ] 1 93 G C - - MP 9 8 3 13 6 9 41 111 132 -8.874 -8.813 -0.025 -7.590 -7.870 -8.265 -3.542 -2.538 -3.593 0.945 -3.533 -4.149 0.846 -3.688 -3.429 3.116 -3.863 -0.225 0.401 -3.656 -1.147 -2.486 ML 10 8 3 13 6 5 38 110 131 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 11 8 3 13 6 4 38 110 131 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 12 8 3 13 6 1 34 107 129 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 13 13 5 13 6 6 40 111 132 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 14 14 6 14 5 6 40 111 132 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 4 ] 2 92 G C - - MP 15 14 6 19 6 7 39 109 130 -8.874 -8.813 -0.025 -7.590 -7.870 -8.265 -3.542 -2.538 -3.593 0.945 -3.533 -4.149 0.846 -3.688 -3.429 3.116 -3.863 -0.225 0.401 -3.656 -1.147 -2.486 ML 16 14 6 19 6 4 37 108 129 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 17 14 6 19 6 3 36 108 129 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 18 14 6 19 6 1 34 106 127 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 19 19 5 19 6 5 38 109 130 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 20 20 6 20 5 5 38 109 130 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 5 ] 3 91 G C - - MP 21 20 6 25 4 5 37 107 128 -6.231 -6.438 -0.088 -4.852 -3.542 -2.538 -3.593 0.945 -3.533 -4.149 0.846 -3.688 -3.429 3.116 -3.863 -0.225 0.401 -3.656 -1.147 -2.486 ML 22 20 6 25 4 3 36 107 128 -3.758 -3.940 -0.507 -2.670 0.368 -0.385 -0.191 0.094 MR 23 20 6 25 4 2 35 107 128 -4.809 -3.838 -1.706 -0.766 0.368 -0.385 -0.191 0.094 D 24 20 6 25 4 1 34 106 127 -4.568 -4.250 -2.265 -0.520 IL 25 25 5 25 4 4 37 108 130 -1.686 -2.369 -1.117 -4.855 0.000 0.000 0.000 0.000 IR 26 26 6 26 3 4 37 108 129 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 6 ] 4 - A - - - ML 27 26 6 29 3 4 35 105 126 -7.756 -0.028 -6.074 1.230 -1.143 -0.886 -0.599 D 28 26 6 29 3 1 33 104 125 -5.620 -0.734 -1.403 IL 29 29 3 29 3 3 35 106 127 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 7 ] - 90 - A - - MR 30 29 3 32 5 3 35 104 125 -6.543 -0.058 -6.358 -6.570 -7.462 1.230 -1.143 -0.886 -0.599 D 31 29 3 32 5 0 32 103 124 -5.352 -0.707 -2.978 -4.409 -2.404 IR 32 32 3 32 5 2 34 104 125 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 8 ] 5 89 G C - - MP 33 32 3 37 4 3 34 103 124 -6.231 -6.438 -0.088 -4.852 -3.542 -2.538 -3.593 0.945 -3.533 -4.149 0.846 -3.688 -3.429 3.116 -3.863 -0.225 0.401 -3.656 -1.147 -2.486 ML 34 32 3 37 4 1 32 103 124 -3.758 -3.940 -0.507 -2.670 0.368 -0.385 -0.191 0.094 MR 35 32 3 37 4 1 30 102 123 -4.809 -3.838 -1.706 -0.766 0.368 -0.385 -0.191 0.094 D 36 32 3 37 4 0 29 101 122 -4.568 -4.250 -2.265 -0.520 IL 37 37 5 37 4 2 33 104 125 -1.686 -2.369 -1.117 -4.855 0.000 0.000 0.000 0.000 IR 38 38 6 38 3 2 33 103 124 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 9 ] 6 - c - - - ML 39 38 6 41 3 2 32 101 121 -7.313 -0.033 -5.967 -0.376 0.872 -1.109 -0.096 D 40 38 6 41 3 0 28 99 120 -6.174 -1.687 -0.566 IL 41 41 3 41 3 2 32 102 123 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 10 ] 7 - c - - - ML 42 41 3 44 3 2 31 100 120 -7.756 -0.028 -6.074 -0.376 0.872 -1.109 -0.096 D 43 41 3 44 3 0 27 98 119 -5.620 -0.734 -1.403 IL 44 44 3 44 3 1 31 100 121 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 11 ] - 88 - U - - MR 45 44 3 47 3 1 30 99 119 -7.756 -0.028 -6.074 -0.398 -0.630 -1.041 1.076 D 46 44 3 47 3 0 26 97 118 -6.390 -1.568 -0.620 IR 47 47 3 47 3 1 30 99 120 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 12 ] - 87 - U - - MR 48 47 3 50 5 1 29 98 118 -6.543 -0.058 -6.358 -6.570 -7.462 -0.398 -0.630 -1.041 1.076 D 49 47 3 50 5 0 25 96 117 -5.352 -0.707 -2.978 -4.409 -2.404 IR 50 50 3 50 5 1 28 98 119 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 13 ] 8 86 G C - - MP 51 50 3 55 6 2 29 97 117 -8.874 -8.813 -0.025 -7.590 -7.870 -8.265 -3.542 -2.538 -3.593 0.945 -3.533 -4.149 0.846 -3.688 -3.429 3.116 -3.863 -0.225 0.401 -3.656 -1.147 -2.486 ML 52 50 3 55 6 1 26 95 116 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 53 50 3 55 6 1 25 95 116 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 54 50 3 55 6 0 21 93 114 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 55 55 5 55 6 1 27 96 117 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 56 56 6 56 5 1 27 96 117 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 14 ] 9 85 G C - - MP 57 56 6 61 6 2 27 95 115 -8.874 -8.813 -0.025 -7.590 -7.870 -8.265 -3.542 -2.538 -3.593 0.945 -3.533 -4.149 0.846 -3.688 -3.429 3.116 -3.863 -0.225 0.401 -3.656 -1.147 -2.486 ML 58 56 6 61 6 1 25 94 114 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 59 56 6 61 6 1 23 93 114 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 60 56 6 61 6 0 21 92 112 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 61 61 5 61 6 1 26 94 115 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 62 62 6 62 5 1 25 94 115 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 15 ] 10 84 G C - - MP 63 62 6 67 4 2 25 93 113 -6.231 -6.438 -0.088 -4.852 -3.542 -2.538 -3.593 0.945 -3.533 -4.149 0.846 -3.688 -3.429 3.116 -3.863 -0.225 0.401 -3.656 -1.147 -2.486 ML 64 62 6 67 4 1 23 93 113 -3.758 -3.940 -0.507 -2.670 0.368 -0.385 -0.191 0.094 MR 65 62 6 67 4 1 22 92 113 -4.809 -3.838 -1.706 -0.766 0.368 -0.385 -0.191 0.094 D 66 62 6 67 4 0 21 91 112 -4.568 -4.250 -2.265 -0.520 IL 67 67 5 67 4 1 24 94 115 -1.686 -2.369 -1.117 -4.855 0.000 0.000 0.000 0.000 IR 68 68 6 68 3 1 24 93 114 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 16 ] 11 - U - - - ML 69 68 6 71 3 1 23 90 111 -7.756 -0.028 -6.074 -0.398 -0.630 -1.041 1.076 D 70 68 6 71 3 0 20 89 110 -5.620 -0.734 -1.403 IL 71 71 3 71 3 1 23 91 112 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 17 ] - 83 - U - - MR 72 71 3 74 5 1 22 89 110 -6.543 -0.058 -6.358 -6.570 -7.462 -0.398 -0.630 -1.041 1.076 D 73 71 3 74 5 0 18 88 108 -5.352 -0.707 -2.978 -4.409 -2.404 IR 74 74 3 74 5 1 21 90 110 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 18 ] 12 82 G C - - MP 75 74 3 79 6 2 22 88 109 -8.874 -8.813 -0.025 -7.590 -7.870 -8.265 -3.542 -2.538 -3.593 0.945 -3.533 -4.149 0.846 -3.688 -3.429 3.116 -3.863 -0.225 0.401 -3.656 -1.147 -2.486 ML 76 74 3 79 6 1 19 87 107 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 77 74 3 79 6 1 18 87 107 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 78 74 3 79 6 0 15 84 105 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 79 79 5 79 6 1 20 88 108 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 80 80 6 80 5 1 20 88 108 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 19 ] 13 81 G C - - MP 81 80 6 85 6 2 20 86 107 -8.874 -8.813 -0.025 -7.590 -7.870 -8.265 -3.542 -2.538 -3.593 0.945 -3.533 -4.149 0.846 -3.688 -3.429 3.116 -3.863 -0.225 0.401 -3.656 -1.147 -2.486 ML 82 80 6 85 6 1 18 85 106 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 83 80 6 85 6 1 17 85 106 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 84 80 6 85 6 0 14 83 104 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 85 85 5 85 6 1 19 86 107 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 86 86 6 86 5 1 19 86 106 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 20 ] 14 80 G C - - MP 87 86 6 91 4 2 18 84 105 -6.231 -6.438 -0.300 -2.616 -3.542 -2.538 -3.593 0.945 -3.533 -4.149 0.846 -3.688 -3.429 3.116 -3.863 -0.225 0.401 -3.656 -1.147 -2.486 ML 88 86 6 91 4 1 17 84 105 -3.758 -3.940 -0.507 -2.670 0.368 -0.385 -0.191 0.094 MR 89 86 6 91 4 1 15 84 104 -4.809 -3.838 -1.706 -0.766 0.368 -0.385 -0.191 0.094 D 90 86 6 91 4 0 14 83 103 -4.568 -4.250 -2.265 -0.520 IL 91 91 5 91 4 1 18 86 106 -1.686 -2.369 -1.117 -4.855 0.000 0.000 0.000 0.000 IR 92 92 6 92 3 1 18 85 105 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 21 ] 15 - g - - - ML 93 92 6 95 5 1 17 82 102 -6.402 -0.064 -6.218 -6.430 -7.322 0.020 -0.869 0.709 -0.316 D 94 92 6 95 5 0 13 81 101 -5.422 -0.535 -4.683 -3.058 -2.971 IL 95 95 3 95 5 1 16 82 103 -2.408 -0.496 -4.087 -5.920 -5.193 0.000 0.000 0.000 0.000 [ MATP 22 ] 16 79 u a - - MP 96 95 3 100 6 2 16 81 101 -8.874 -8.813 -0.025 -7.590 -7.870 -8.265 -3.229 -2.937 -3.152 0.677 -2.343 -3.785 1.957 -2.948 -3.172 1.214 -3.579 -0.833 2.430 -3.395 -0.041 -2.069 ML 97 95 3 100 6 1 13 80 100 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 98 95 3 100 6 1 13 80 100 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 99 95 3 100 6 0 10 77 98 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 100 100 5 100 6 1 15 81 101 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 101 101 6 101 5 1 15 80 101 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 23 ] 17 78 G C - - MP 102 101 6 106 4 2 14 79 99 -6.221 -7.467 -0.128 -3.920 -3.542 -2.538 -3.593 0.945 -3.533 -4.149 0.846 -3.688 -3.429 3.116 -3.863 -0.225 0.401 -3.656 -1.147 -2.486 ML 103 101 6 106 4 1 12 78 99 -2.408 -4.532 -1.293 -1.473 0.368 -0.385 -0.191 0.094 MR 104 101 6 106 4 1 12 78 98 -4.102 -12.528 -0.390 -2.485 0.368 -0.385 -0.191 0.094 D 105 101 6 106 4 0 10 76 96 -12.737 -14.007 -2.036 -0.404 IL 106 106 5 106 4 1 13 78 99 -2.817 -4.319 -0.613 -2.698 0.000 0.000 0.000 0.000 IR 107 107 6 107 3 1 13 79 99 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 24 ] - 77 - U - - MR 108 107 6 110 5 1 13 77 97 -6.543 -0.058 -6.358 -6.570 -7.462 -0.398 -0.630 -1.041 1.076 D 109 107 6 110 5 0 9 76 96 -5.352 -0.707 -2.978 -4.409 -2.404 IR 110 110 3 110 5 1 12 77 98 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 25 ] 18 76 c g - - MP 111 110 3 115 4 2 12 76 96 -6.221 -7.467 -0.128 -3.920 -3.449 -3.186 -3.303 0.447 -2.338 -3.849 2.936 -3.014 -3.334 0.986 -3.690 -1.103 1.258 -3.574 -0.036 -2.219 ML 112 110 3 115 4 1 9 75 96 -2.408 -4.532 -1.293 -1.473 0.368 -0.385 -0.191 0.094 MR 113 110 3 115 4 1 10 75 95 -4.102 -12.528 -0.390 -2.485 0.368 -0.385 -0.191 0.094 D 114 110 3 115 4 0 7 73 93 -12.737 -14.007 -2.036 -0.404 IL 115 115 5 115 4 1 10 75 96 -2.817 -4.319 -0.613 -2.698 0.000 0.000 0.000 0.000 IR 116 116 6 116 3 1 11 76 96 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 26 ] - 75 - c - - MR 117 116 6 119 5 1 11 74 94 -6.543 -0.058 -6.358 -6.570 -7.462 -0.376 0.872 -1.109 -0.096 D 118 116 6 119 5 0 6 73 93 -5.352 -0.707 -2.978 -4.409 -2.404 IR 119 119 3 119 5 1 10 74 95 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 27 ] 19 74 u a - - MP 120 119 3 124 6 2 11 73 93 -8.874 -8.813 -0.025 -7.590 -7.870 -8.265 -3.229 -2.937 -3.152 0.677 -2.343 -3.785 1.957 -2.948 -3.172 1.214 -3.579 -0.833 2.430 -3.395 -0.041 -2.069 ML 121 119 3 124 6 1 7 72 92 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 122 119 3 124 6 1 6 71 92 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 123 119 3 124 6 0 3 69 89 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 124 124 5 124 6 1 9 73 93 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 125 125 6 125 5 1 9 72 93 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 28 ] 20 73 G C - - MP 126 125 6 130 6 2 9 71 91 -8.874 -8.813 -0.025 -7.590 -7.870 -8.265 -3.542 -2.538 -3.593 0.945 -3.533 -4.149 0.846 -3.688 -3.429 3.116 -3.863 -0.225 0.401 -3.656 -1.147 -2.486 ML 127 125 6 130 6 1 7 70 90 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 128 125 6 130 6 1 5 70 90 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 129 125 6 130 6 0 3 68 88 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 130 130 5 130 6 1 7 71 91 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 131 131 6 131 5 1 7 70 91 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 29 ] 21 72 G C - - MP 132 131 6 136 4 2 7 69 89 -6.231 -6.438 -0.300 -2.616 -3.542 -2.538 -3.593 0.945 -3.533 -4.149 0.846 -3.688 -3.429 3.116 -3.863 -0.225 0.401 -3.656 -1.147 -2.486 ML 133 131 6 136 4 1 6 69 89 -3.758 -3.940 -0.507 -2.670 0.368 -0.385 -0.191 0.094 MR 134 131 6 136 4 1 4 69 89 -4.809 -3.838 -1.706 -0.766 0.368 -0.385 -0.191 0.094 D 135 131 6 136 4 0 3 67 88 -4.568 -4.250 -2.265 -0.520 IL 136 136 5 136 4 1 8 70 91 -1.686 -2.369 -1.117 -4.855 0.000 0.000 0.000 0.000 IR 137 137 6 137 3 1 7 69 90 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 30 ] 22 - g - - - ML 138 137 6 140 5 1 7 67 87 -6.402 -0.064 -6.218 -6.430 -7.322 0.020 -0.869 0.709 -0.316 D 139 137 6 140 5 0 2 65 85 -5.422 -0.535 -4.683 -3.058 -2.971 IL 140 140 3 140 5 1 5 67 87 -2.408 -0.496 -4.087 -5.920 -5.193 0.000 0.000 0.000 0.000 [ MATP 31 ] 23 71 c g - - MP 141 140 3 145 6 2 8 66 86 -8.874 -8.813 -0.025 -7.590 -7.870 -8.265 -3.449 -3.186 -3.303 0.447 -2.338 -3.849 2.936 -3.014 -3.334 0.986 -3.690 -1.103 1.258 -3.574 -0.036 -2.219 ML 142 140 3 145 6 1 3 64 84 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 143 140 3 145 6 1 3 64 84 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 144 140 3 145 6 0 0 62 82 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 145 145 5 145 6 1 4 65 85 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 146 146 6 146 5 1 4 65 85 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 32 ] 24 70 c g - - MP 147 146 6 151 6 2 6 64 84 -8.874 -8.813 -0.025 -7.590 -7.870 -8.265 -3.449 -3.186 -3.303 0.447 -2.338 -3.849 2.936 -3.014 -3.334 0.986 -3.690 -1.103 1.258 -3.574 -0.036 -2.219 ML 148 146 6 151 6 1 3 63 83 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 149 146 6 151 6 1 2 62 82 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 150 146 6 151 6 0 0 61 81 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 151 151 5 151 6 1 4 63 83 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 152 152 6 152 5 1 3 63 83 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 33 ] 25 69 c g - - MP 153 152 6 157 4 2 4 62 82 -6.231 -6.438 -0.088 -4.852 -3.449 -3.186 -3.303 0.447 -2.338 -3.849 2.936 -3.014 -3.334 0.986 -3.690 -1.103 1.258 -3.574 -0.036 -2.219 ML 154 152 6 157 4 1 2 62 82 -3.758 -3.940 -0.507 -2.670 0.368 -0.385 -0.191 0.094 MR 155 152 6 157 4 1 1 61 81 -4.809 -3.838 -1.706 -0.766 0.368 -0.385 -0.191 0.094 D 156 152 6 157 4 0 0 60 80 -4.568 -4.250 -2.265 -0.520 IL 157 157 5 157 4 1 3 63 83 -1.686 -2.369 -1.117 -4.855 0.000 0.000 0.000 0.000 IR 158 158 6 158 3 1 3 62 82 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 34 ] 26 - U - - - ML 159 158 6 161 3 1 3 59 79 -7.313 -0.033 -5.967 -0.398 -0.630 -1.041 1.076 D 160 158 6 161 3 0 0 58 78 -6.174 -1.687 -0.566 IL 161 161 3 161 3 1 2 61 81 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 35 ] 27 - G - - - ML 162 161 3 164 3 1 3 58 78 -7.313 -0.033 -5.967 -0.276 -1.232 1.075 -0.639 D 163 161 3 164 3 0 0 57 76 -6.174 -1.687 -0.566 IL 164 164 3 164 3 1 2 60 80 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 36 ] 28 - c - - - ML 165 164 3 167 3 1 3 57 77 -7.313 -0.033 -5.967 -0.376 0.872 -1.109 -0.096 D 166 164 3 167 3 0 0 55 75 -6.174 -1.687 -0.566 IL 167 167 3 167 3 1 2 59 79 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 37 ] 29 - U - - - ML 168 167 3 170 3 1 2 56 75 -7.313 -0.033 -5.967 -0.398 -0.630 -1.041 1.076 D 169 167 3 170 3 0 0 54 74 -6.174 -1.687 -0.566 IL 170 170 3 170 3 1 1 58 78 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 38 ] 30 - U - - - ML 171 170 3 173 3 1 2 55 74 -7.313 -0.033 -5.967 -0.398 -0.630 -1.041 1.076 D 172 170 3 173 3 0 0 53 73 -6.174 -1.687 -0.566 IL 173 173 3 173 3 1 1 57 77 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 39 ] 31 - c - - - ML 174 173 3 176 3 1 1 54 73 -7.756 -0.028 -6.074 -0.376 0.872 -1.109 -0.096 D 175 173 3 176 3 0 0 52 72 -5.620 -0.734 -1.403 IL 176 176 3 176 3 1 1 54 74 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 40 ] - 68 - U - - MR 177 176 3 179 5 1 1 53 72 -6.543 -0.058 -6.358 -6.570 -7.462 -0.398 -0.630 -1.041 1.076 D 178 176 3 179 5 0 0 51 71 -5.352 -0.707 -2.978 -4.409 -2.404 IR 179 179 3 179 5 1 1 53 73 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 41 ] 32 67 c g - - MP 180 179 3 184 6 2 2 52 71 -8.874 -8.813 -0.025 -7.590 -7.870 -8.265 -3.449 -3.186 -3.303 0.447 -2.338 -3.849 2.936 -3.014 -3.334 0.986 -3.690 -1.103 1.258 -3.574 -0.036 -2.219 ML 181 179 3 184 6 1 1 50 70 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 182 179 3 184 6 1 1 50 70 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 183 179 3 184 6 0 0 48 67 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 184 184 5 184 6 1 1 51 71 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 185 185 6 185 5 1 1 51 71 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 42 ] 33 66 G C - - MP 186 185 6 190 6 2 2 50 69 -8.874 -8.813 -0.025 -7.590 -7.870 -8.265 -3.542 -2.538 -3.593 0.945 -3.533 -4.149 0.846 -3.688 -3.429 3.116 -3.863 -0.225 0.401 -3.656 -1.147 -2.486 ML 187 185 6 190 6 1 1 48 68 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 188 185 6 190 6 1 1 48 68 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 189 185 6 190 6 0 0 46 65 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 190 190 5 190 6 1 1 49 69 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 191 191 6 191 5 1 1 49 69 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 43 ] 34 65 c g - - MP 192 191 6 196 6 2 2 48 67 -8.874 -8.813 -0.025 -7.590 -7.870 -8.265 -3.087 -2.907 -3.001 0.659 -2.141 -3.596 2.118 -2.784 -3.037 1.105 -3.431 -0.911 1.466 -3.244 1.691 -1.956 ML 193 191 6 196 6 1 1 46 66 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 194 191 6 196 6 1 1 46 66 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 195 191 6 196 6 0 0 44 63 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 196 196 5 196 6 1 1 47 67 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 197 197 6 197 5 1 1 47 67 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 44 ] 35 64 G C - - MP 198 197 6 202 6 2 2 46 65 -8.874 -8.813 -0.025 -7.590 -7.870 -8.265 -3.542 -2.538 -3.593 0.945 -3.533 -4.149 0.846 -3.688 -3.429 3.116 -3.863 -0.225 0.401 -3.656 -1.147 -2.486 ML 199 197 6 202 6 1 1 44 64 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 200 197 6 202 6 1 1 44 64 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 201 197 6 202 6 0 0 42 61 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 202 202 5 202 6 1 1 45 65 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 203 203 6 203 5 1 1 45 65 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 45 ] 36 63 g c - - MP 204 203 6 208 6 2 2 44 63 -8.874 -8.813 -0.025 -7.590 -7.870 -8.265 -2.982 -2.110 -3.082 1.427 -3.240 -4.069 1.028 -3.196 -2.959 2.212 -3.459 1.681 0.657 -3.371 -0.913 -1.953 ML 205 203 6 208 6 1 1 42 62 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 206 203 6 208 6 1 1 42 62 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 207 203 6 208 6 0 0 40 60 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 208 208 5 208 6 1 1 43 63 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 209 209 6 209 5 1 1 43 63 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 46 ] 37 62 G C - - MP 210 209 6 214 6 2 2 42 61 -8.874 -8.813 -0.025 -7.590 -7.870 -8.265 -3.542 -2.538 -3.593 0.945 -3.533 -4.149 0.846 -3.688 -3.429 3.116 -3.863 -0.225 0.401 -3.656 -1.147 -2.486 ML 211 209 6 214 6 1 1 41 60 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 212 209 6 214 6 1 1 41 60 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 213 209 6 214 6 0 0 39 58 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 214 214 5 214 6 1 1 41 61 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 215 215 6 215 5 1 1 41 61 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 47 ] 38 61 c g - - MP 216 215 6 220 4 2 2 40 59 -6.231 -6.438 -0.088 -4.852 -3.087 -2.907 -3.001 0.659 -2.141 -3.596 2.118 -2.784 -3.037 1.105 -3.431 -0.911 1.466 -3.244 1.691 -1.956 ML 217 215 6 220 4 1 1 40 60 -3.758 -3.940 -0.507 -2.670 0.368 -0.385 -0.191 0.094 MR 218 215 6 220 4 1 1 39 59 -4.809 -3.838 -1.706 -0.766 0.368 -0.385 -0.191 0.094 D 219 215 6 220 4 0 0 38 58 -4.568 -4.250 -2.265 -0.520 IL 220 220 5 220 4 1 1 41 61 -1.686 -2.369 -1.117 -4.855 0.000 0.000 0.000 0.000 IR 221 221 6 221 3 1 1 40 60 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 48 ] 39 - U - - - ML 222 221 6 224 3 1 1 37 56 -7.756 -0.028 -6.074 -0.398 -0.630 -1.041 1.076 D 223 221 6 224 3 0 0 36 55 -5.620 -0.734 -1.403 IL 224 224 3 224 3 1 1 38 57 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 49 ] - 60 - U - - MR 225 224 3 227 5 1 1 36 55 -6.543 -0.058 -6.358 -6.570 -7.462 -0.398 -0.630 -1.041 1.076 D 226 224 3 227 5 0 0 35 54 -5.352 -0.707 -2.978 -4.409 -2.404 IR 227 227 3 227 5 1 1 36 56 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 50 ] 40 59 c g - - MP 228 227 3 232 6 2 2 35 54 -8.874 -8.813 -0.025 -7.590 -7.870 -8.265 -3.087 -2.907 -3.001 0.659 -2.141 -3.596 2.118 -2.784 -3.037 1.105 -3.431 -0.911 1.466 -3.244 1.691 -1.956 ML 229 227 3 232 6 1 1 34 53 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 230 227 3 232 6 1 1 33 53 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 231 227 3 232 6 0 0 31 50 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 232 232 5 232 6 1 1 35 54 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 233 233 6 233 5 1 1 34 54 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 51 ] 41 58 c g - - MP 234 233 6 238 6 2 2 33 52 -8.874 -8.813 -0.025 -7.590 -7.870 -8.265 -3.449 -3.186 -3.303 0.447 -2.338 -3.849 2.936 -3.014 -3.334 0.986 -3.690 -1.103 1.258 -3.574 -0.036 -2.219 ML 235 233 6 238 6 1 1 32 51 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 236 233 6 238 6 1 1 31 51 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 237 233 6 238 6 0 0 29 48 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 238 238 5 238 6 1 1 33 52 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 239 239 6 239 5 1 1 32 52 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 52 ] 42 57 a u - - MP 240 239 6 244 6 2 2 31 50 -8.874 -8.813 -0.025 -7.590 -7.870 -8.265 -3.058 -2.304 -3.106 2.333 -3.030 -4.083 1.251 -3.155 -3.036 1.963 -3.536 0.064 0.802 -3.415 -0.710 -1.993 ML 241 239 6 244 6 1 1 30 49 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 242 239 6 244 6 1 1 30 49 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 243 239 6 244 6 0 0 27 47 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 244 244 5 244 6 1 1 31 50 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 245 245 6 245 5 1 1 30 50 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 53 ] 43 56 G C - - MP 246 245 6 250 6 2 2 29 48 -8.874 -8.813 -0.025 -7.590 -7.870 -8.265 -3.542 -2.538 -3.593 0.945 -3.533 -4.149 0.846 -3.688 -3.429 3.116 -3.863 -0.225 0.401 -3.656 -1.147 -2.486 ML 247 245 6 250 6 1 1 28 47 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 248 245 6 250 6 1 1 28 47 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 249 245 6 250 6 0 0 26 46 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 250 250 5 250 6 1 1 29 48 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 251 251 6 251 5 1 1 28 48 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 54 ] 44 55 c g - - MP 252 251 6 256 4 2 2 27 46 -6.231 -6.438 -0.088 -4.852 -3.449 -3.186 -3.303 0.447 -2.338 -3.849 2.936 -3.014 -3.334 0.986 -3.690 -1.103 1.258 -3.574 -0.036 -2.219 ML 253 251 6 256 4 1 1 27 47 -3.758 -3.940 -0.507 -2.670 0.368 -0.385 -0.191 0.094 MR 254 251 6 256 4 1 1 27 46 -4.809 -3.838 -1.706 -0.766 0.368 -0.385 -0.191 0.094 D 255 251 6 256 4 0 0 26 45 -4.568 -4.250 -2.265 -0.520 IL 256 256 5 256 4 1 1 29 48 -1.686 -2.369 -1.117 -4.855 0.000 0.000 0.000 0.000 IR 257 257 6 257 3 1 1 28 47 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 55 ] 45 - U - - - ML 258 257 6 260 3 1 1 24 43 -7.756 -0.028 -6.074 -0.398 -0.630 -1.041 1.076 D 259 257 6 260 3 0 0 23 42 -5.620 -0.734 -1.403 IL 260 260 3 260 3 1 1 25 44 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 56 ] - 54 - U - - MR 261 260 3 263 5 1 1 23 42 -6.543 -0.058 -6.358 -6.570 -7.462 -0.398 -0.630 -1.041 1.076 D 262 260 3 263 5 0 0 22 41 -5.352 -0.707 -2.978 -4.409 -2.404 IR 263 263 3 263 5 1 1 24 42 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 57 ] 46 53 c g - - MP 264 263 3 268 6 2 2 22 41 -8.874 -8.813 -0.025 -7.590 -7.870 -8.265 -3.449 -3.186 -3.303 0.447 -2.338 -3.849 2.936 -3.014 -3.334 0.986 -3.690 -1.103 1.258 -3.574 -0.036 -2.219 ML 265 263 3 268 6 1 1 22 40 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 266 263 3 268 6 1 1 21 40 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 267 263 3 268 6 0 0 20 38 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 268 268 5 268 6 1 1 22 41 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 269 269 6 269 5 1 1 22 40 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 58 ] 47 52 c g - - MP 270 269 6 274 4 2 2 20 39 -6.231 -6.438 -0.088 -4.852 -3.087 -2.907 -3.001 0.659 -2.141 -3.596 2.118 -2.784 -3.037 1.105 -3.431 -0.911 1.466 -3.244 1.691 -1.956 ML 271 269 6 274 4 1 1 21 40 -3.758 -3.940 -0.507 -2.670 0.368 -0.385 -0.191 0.094 MR 272 269 6 274 4 1 1 20 39 -4.809 -3.838 -1.706 -0.766 0.368 -0.385 -0.191 0.094 D 273 269 6 274 4 0 0 19 38 -4.568 -4.250 -2.265 -0.520 IL 274 274 5 274 4 1 1 22 41 -1.686 -2.369 -1.117 -4.855 0.000 0.000 0.000 0.000 IR 275 275 6 275 3 1 1 21 40 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 59 ] 48 - c - - - ML 276 275 6 278 3 1 1 17 35 -7.313 -0.033 -5.967 -0.376 0.872 -1.109 -0.096 D 277 275 6 278 3 0 0 16 35 -6.174 -1.687 -0.566 IL 278 278 3 278 3 1 1 20 39 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 60 ] 49 - G - - - ML 279 278 3 281 3 1 1 15 34 -7.313 -0.033 -5.967 -0.276 -1.232 1.075 -0.639 D 280 278 3 281 3 0 0 15 33 -6.174 -1.687 -0.566 IL 281 281 3 281 3 1 1 19 37 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 61 ] 50 - U - - - ML 282 281 3 284 3 1 1 13 32 -7.313 -0.033 -5.967 -0.398 -0.630 -1.041 1.076 D 283 281 3 284 3 0 0 13 32 -6.174 -1.687 -0.566 IL 284 284 3 284 3 1 1 18 36 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 62 ] 51 - U - - - ML 285 284 3 287 2 1 1 1 1 * 0.000 -0.398 -0.630 -1.041 1.076 D 286 284 3 287 2 0 0 0 0 * 0.000 IL 287 287 3 287 2 1 1 13 28 -1.823 -0.479 0.000 0.000 0.000 0.000 [ END 63 ] - - - - - - E 288 287 3 -1 0 0 0 0 0 // HMMER3/f [3.4 | Aug 2023] NAME mir-9128 ACC RF03505 DESC mir-9128 microRNA precursor family LENG 95 MAXL 195 ALPH RNA RF no MM no CONS yes CS yes MAP yes DATE Fri Jul 12 22:03:43 2024 COM [1] /hps/software/users/agb/rfam/bin/cmbuild -F CM SEED COM [2] /hps/software/users/agb/rfam/bin/cmcalibrate --cpu 8 /nfs/production/agb/rfam/15/rescan/families/RF03505/CM NSEQ 2 EFFN 1.246094 CKSUM 4142311913 STATS LOCAL MSV -9.4816 0.71888 STATS LOCAL VITERBI -10.3472 0.71888 STATS LOCAL FORWARD -3.0394 0.71888 HMM A C G U m->m m->i m->d i->m i->i d->m d->d COMPO 1.92349 1.22870 1.18901 1.35982 1.38629 1.38629 1.38629 1.38629 0.05376 3.64312 3.64312 1.46634 0.26236 0.00000 * 1 2.20117 2.58818 0.30733 2.54130 1 G - - < 1.38629 1.38629 1.38629 1.38629 0.05376 3.64312 3.64312 1.46634 0.26236 1.09861 0.40547 2 2.20529 2.59151 0.30582 2.54644 2 G - - < 1.38629 1.38629 1.38629 1.38629 0.05376 3.64312 3.64312 1.46634 0.26236 1.09861 0.40547 3 2.20712 2.59299 0.30516 2.54872 3 G - - < 1.38629 1.38629 1.38629 1.38629 0.05376 3.64312 3.64312 1.46634 0.26236 1.09861 0.40547 4 0.30381 2.63773 2.42181 2.28555 4 A - - - 1.38629 1.38629 1.38629 1.38629 0.05376 3.64312 3.64312 1.46634 0.26236 1.09861 0.40547 5 2.20524 2.59147 0.30584 2.54638 5 G - - < 1.38629 1.38629 1.38629 1.38629 0.05376 3.64312 3.64312 1.46634 0.26236 1.09861 0.40547 6 2.13269 0.42867 2.68093 1.82257 6 C - - - 1.38629 1.38629 1.38629 1.38629 0.05376 3.64312 3.64312 1.46634 0.26236 1.09861 0.40547 7 2.13269 0.42867 2.68093 1.82257 7 C - - - 1.38629 1.38629 1.38629 1.38629 0.05376 3.64312 3.64312 1.46634 0.26236 1.09861 0.40547 8 2.20526 2.59149 0.30584 2.54640 8 G - - < 1.38629 1.38629 1.38629 1.38629 0.05376 3.64312 3.64312 1.46634 0.26236 1.09861 0.40547 9 2.20769 2.59344 0.30495 2.54943 9 G - - < 1.38629 1.38629 1.38629 1.38629 0.05376 3.64312 3.64312 1.46634 0.26236 1.09861 0.40547 10 2.20861 2.59419 0.30462 2.55058 10 G - - < 1.38629 1.38629 1.38629 1.38629 0.05376 3.64312 3.64312 1.46634 0.26236 1.09861 0.40547 11 2.06447 2.12716 2.55038 0.39173 11 U - - - 1.38629 1.38629 1.38629 1.38629 0.05376 3.64312 3.64312 1.46634 0.26236 1.09861 0.40547 12 2.20541 2.59161 0.30578 2.54659 12 G - - < 1.38629 1.38629 1.38629 1.38629 0.05376 3.64312 3.64312 1.46634 0.26236 1.09861 0.40547 13 2.20777 2.59351 0.30492 2.54954 13 G - - < 1.38629 1.38629 1.38629 1.38629 0.05376 3.64312 3.64312 1.46634 0.26236 1.09861 0.40547 14 2.20867 2.59424 0.30460 2.55065 14 G - - < 1.38629 1.38629 1.38629 1.38629 0.30416 3.64312 1.44356 1.46634 0.26236 1.09861 0.40547 15 1.62961 2.30494 0.59211 1.89002 15 G - - - 1.38629 1.38629 1.38629 1.38629 0.06854 3.40751 3.40751 1.46634 0.26236 0.20025 1.70666 16 2.37877 1.50248 2.05556 0.58566 16 U - - < 1.38629 1.38629 1.38629 1.38629 0.05376 3.64312 3.64312 1.46634 0.26236 1.09861 0.40547 17 2.20072 2.58782 0.30750 2.54074 17 G - - < 1.38629 1.38629 1.38629 1.38629 0.05376 3.64312 3.64312 1.46634 0.26236 1.09861 0.40547 18 2.59113 0.44657 2.29493 1.69022 18 C - - < 1.38629 1.38629 1.38629 1.38629 0.05376 3.64312 3.64312 1.46634 0.26236 1.09861 0.40547 19 2.37528 1.50268 2.05456 0.58639 19 U - - < 1.38629 1.38629 1.38629 1.38629 0.05376 3.64312 3.64312 1.46634 0.26236 1.09861 0.40547 20 2.20106 2.58809 0.30737 2.54116 20 G - - < 1.38629 1.38629 1.38629 1.38629 0.05376 3.64312 3.64312 1.46634 0.26236 1.09861 0.40547 21 2.20448 2.59086 0.30612 2.54543 21 G - - < 1.38629 1.38629 1.38629 1.38629 0.30416 3.64312 1.44356 1.46634 0.26236 1.09861 0.40547 22 1.62961 2.30494 0.59211 1.89002 22 G - - - 1.38629 1.38629 1.38629 1.38629 0.06854 3.40751 3.40751 1.46634 0.26236 0.20025 1.70666 23 2.59824 0.44507 2.29745 1.69118 23 C - - < 1.38629 1.38629 1.38629 1.38629 0.05376 3.64312 3.64312 1.46634 0.26236 1.09861 0.40547 24 2.60555 0.44354 2.30003 1.69215 24 C - - < 1.38629 1.38629 1.38629 1.38629 0.05376 3.64312 3.64312 1.46634 0.26236 1.09861 0.40547 25 2.60957 0.44271 2.30144 1.69269 25 C - - < 1.38629 1.38629 1.38629 1.38629 0.05376 3.64312 3.64312 1.46634 0.26236 1.09861 0.40547 26 2.06447 2.12716 2.55038 0.39173 26 U - - - 1.38629 1.38629 1.38629 1.38629 0.05376 3.64312 3.64312 1.46634 0.26236 1.09861 0.40547 27 2.06073 2.83216 0.32360 2.40557 27 G - - - 1.38629 1.38629 1.38629 1.38629 0.05376 3.64312 3.64312 1.46634 0.26236 1.09861 0.40547 28 2.13269 0.42867 2.68093 1.82257 28 C - - - 1.38629 1.38629 1.38629 1.38629 0.05376 3.64312 3.64312 1.46634 0.26236 1.09861 0.40547 29 2.06447 2.12716 2.55038 0.39173 29 U - - - 1.38629 1.38629 1.38629 1.38629 0.05376 3.64312 3.64312 1.46634 0.26236 1.09861 0.40547 30 2.06447 2.12716 2.55038 0.39173 30 U - - - 1.38629 1.38629 1.38629 1.38629 0.05376 3.64312 3.64312 1.46634 0.26236 1.09861 0.40547 31 2.13269 0.42867 2.68093 1.82257 31 C - - - 1.38629 1.38629 1.38629 1.38629 0.05376 3.64312 3.64312 1.46634 0.26236 1.09861 0.40547 32 2.61470 0.44165 2.30324 1.69337 32 C - - < 1.38629 1.38629 1.38629 1.38629 0.05376 3.64312 3.64312 1.46634 0.26236 1.09861 0.40547 33 2.20800 2.59370 0.30484 2.54983 33 G - - < 1.38629 1.38629 1.38629 1.38629 0.05376 3.64312 3.64312 1.46634 0.26236 1.09861 0.40547 34 2.40236 1.32430 2.11093 0.64936 34 U - - < 1.38629 1.38629 1.38629 1.38629 0.05376 3.64312 3.64312 1.46634 0.26236 1.09861 0.40547 35 2.20899 2.59449 0.30448 2.55105 35 G - - < 1.38629 1.38629 1.38629 1.38629 0.05376 3.64312 3.64312 1.46634 0.26236 1.09861 0.40547 36 1.69632 2.29586 0.50148 2.20423 36 G - - < 1.38629 1.38629 1.38629 1.38629 0.05376 3.64312 3.64312 1.46634 0.26236 1.09861 0.40547 37 2.20870 2.59426 0.30459 2.55069 37 G - - < 1.38629 1.38629 1.38629 1.38629 0.05376 3.64312 3.64312 1.46634 0.26236 1.09861 0.40547 38 2.40193 1.32435 2.11080 0.64944 38 U - - < 1.38629 1.38629 1.38629 1.38629 0.05376 3.64312 3.64312 1.46634 0.26236 1.09861 0.40547 39 2.06447 2.12716 2.55038 0.39173 39 U - - - 1.38629 1.38629 1.38629 1.38629 0.05376 3.64312 3.64312 1.46634 0.26236 1.09861 0.40547 40 2.39746 1.32484 2.10938 0.65030 40 U - - < 1.38629 1.38629 1.38629 1.38629 0.05376 3.64312 3.64312 1.46634 0.26236 1.09861 0.40547 41 2.61785 0.44100 2.30434 1.69379 41 C - - < 1.38629 1.38629 1.38629 1.38629 0.05376 3.64312 3.64312 1.46634 0.26236 1.09861 0.40547 42 0.68104 2.13292 1.37936 2.09006 42 A - - < 1.38629 1.38629 1.38629 1.38629 0.05376 3.64312 3.64312 1.46634 0.26236 1.09861 0.40547 43 2.20881 2.59435 0.30455 2.55084 43 G - - < 1.38629 1.38629 1.38629 1.38629 0.05376 3.64312 3.64312 1.46634 0.26236 1.09861 0.40547 44 2.61994 0.44057 2.30507 1.69406 44 C - - < 1.38629 1.38629 1.38629 1.38629 0.05376 3.64312 3.64312 1.46634 0.26236 1.09861 0.40547 45 2.06447 2.12716 2.55038 0.39173 45 U - - - 1.38629 1.38629 1.38629 1.38629 0.05376 3.64312 3.64312 1.46634 0.26236 1.09861 0.40547 46 2.61365 0.44186 2.30287 1.69323 46 C - - < 1.38629 1.38629 1.38629 1.38629 0.05376 3.64312 3.64312 1.46634 0.26236 1.09861 0.40547 47 2.40084 1.32446 2.11045 0.64965 47 U - - < 1.38629 1.38629 1.38629 1.38629 0.05376 3.64312 3.64312 1.46634 0.26236 1.09861 0.40547 48 2.13269 0.42867 2.68093 1.82257 48 C - - _ 1.38629 1.38629 1.38629 1.38629 0.05376 3.64312 3.64312 1.46634 0.26236 1.09861 0.40547 49 2.06073 2.83216 0.32360 2.40557 49 G - - _ 1.38629 1.38629 1.38629 1.38629 0.05376 3.64312 3.64312 1.46634 0.26236 1.09861 0.40547 50 2.06447 2.12716 2.55038 0.39173 50 U - - _ 1.38629 1.38629 1.38629 1.38629 0.05376 3.64312 3.64312 1.46634 0.26236 1.09861 0.40547 51 2.06447 2.12716 2.55038 0.39173 51 U - - _ 1.38629 1.38629 1.38629 1.38629 0.05376 3.64312 3.64312 1.46634 0.26236 1.09861 0.40547 52 1.78092 2.27863 0.48815 2.15997 52 G - - > 1.38629 1.38629 1.38629 1.38629 0.05376 3.64312 3.64312 1.46634 0.26236 1.09861 0.40547 53 1.96689 2.47046 0.38154 2.37784 53 G - - > 1.38629 1.38629 1.38629 1.38629 0.05376 3.64312 3.64312 1.46634 0.26236 1.09861 0.40547 54 2.06447 2.12716 2.55038 0.39173 54 U - - - 1.38629 1.38629 1.38629 1.38629 0.05376 3.64312 3.64312 1.46634 0.26236 1.09861 0.40547 55 1.96552 2.46913 0.38225 2.37587 55 G - - > 1.38629 1.38629 1.38629 1.38629 0.05376 3.64312 3.64312 1.46634 0.26236 1.09861 0.40547 56 2.77623 0.35335 2.42269 1.91926 56 C - - > 1.38629 1.38629 1.38629 1.38629 0.05376 3.64312 3.64312 1.46634 0.26236 1.09861 0.40547 57 2.32478 1.60982 1.95142 0.57946 57 U - - > 1.38629 1.38629 1.38629 1.38629 0.05376 3.64312 3.64312 1.46634 0.26236 1.09861 0.40547 58 1.96651 2.47009 0.38173 2.37730 58 G - - > 1.38629 1.38629 1.38629 1.38629 0.05376 3.64312 3.64312 1.46634 0.26236 1.09861 0.40547 59 1.78115 2.27885 0.48798 2.16029 59 G - - > 1.38629 1.38629 1.38629 1.38629 0.05376 3.64312 3.64312 1.46634 0.26236 1.09861 0.40547 60 2.06447 2.12716 2.55038 0.39173 60 U - - - 1.38629 1.38629 1.38629 1.38629 0.05376 3.64312 3.64312 1.46634 0.26236 1.09861 0.40547 61 1.77991 2.27768 0.48885 2.15852 61 G - - > 1.38629 1.38629 1.38629 1.38629 0.05376 3.64312 3.64312 1.46634 0.26236 1.09861 0.40547 62 2.77465 0.35363 2.42213 1.91896 62 C - - > 1.38629 1.38629 1.38629 1.38629 0.05376 3.64312 3.64312 1.46634 0.26236 1.09861 0.40547 63 2.42820 1.42929 2.10645 0.59664 63 U - - > 1.38629 1.38629 1.38629 1.38629 0.05376 3.64312 3.64312 1.46634 0.26236 1.09861 0.40547 64 2.77652 0.35330 2.42279 1.91932 64 C - - > 1.38629 1.38629 1.38629 1.38629 0.05376 3.64312 3.64312 1.46634 0.26236 1.09861 0.40547 65 1.78073 2.27845 0.48828 2.15969 65 G - - > 1.38629 1.38629 1.38629 1.38629 0.05376 3.64312 3.64312 1.46634 0.26236 1.09861 0.40547 66 2.77891 0.35289 2.42363 1.91979 66 C - - > 1.38629 1.38629 1.38629 1.38629 0.05376 3.64312 3.64312 1.46634 0.26236 1.09861 0.40547 67 1.96703 2.47059 0.38146 2.37804 67 G - - > 1.38629 1.38629 1.38629 1.38629 0.05376 3.64312 3.64312 1.46634 0.26236 1.09861 0.40547 68 2.06447 2.12716 2.55038 0.39173 68 U - - - 1.38629 1.38629 1.38629 1.38629 0.05376 3.64312 3.64312 1.46634 0.26236 1.09861 0.40547 69 1.95510 2.45904 0.38772 2.36095 69 G - - > 1.38629 1.38629 1.38629 1.38629 0.05376 3.64312 3.64312 1.46634 0.26236 1.09861 0.40547 70 1.94903 2.45317 0.39095 2.35229 70 G - - > 1.38629 1.38629 1.38629 1.38629 0.05376 3.64312 3.64312 1.46634 0.26236 1.09861 0.40547 71 1.93829 2.44276 0.39673 2.33701 71 G - - > 1.38629 1.38629 1.38629 1.38629 0.05376 3.64312 3.64312 1.46634 0.26236 1.09861 0.40547 72 2.77156 0.35417 2.42105 1.91835 72 C - - > 1.38629 1.38629 1.38629 1.38629 0.05376 3.64312 3.64312 1.46634 0.26236 1.09861 0.40547 73 2.77141 0.35419 2.42099 1.91832 73 C - - > 1.38629 1.38629 1.38629 1.38629 0.05376 3.64312 3.64312 1.46634 0.26236 1.09861 0.40547 74 0.66655 2.23105 1.33780 2.14826 74 A - - > 1.38629 1.38629 1.38629 1.38629 0.05376 3.64312 3.64312 1.46634 0.26236 1.09861 0.40547 75 2.13269 0.42867 2.68093 1.82257 75 C - - - 1.38629 1.38629 1.38629 1.38629 0.05376 3.64312 3.64312 1.46634 0.26236 1.09861 0.40547 76 1.96377 2.46743 0.38316 2.37336 76 G - - > 1.38629 1.38629 1.38629 1.38629 0.05376 3.64312 3.64312 1.46634 0.26236 1.09861 0.40547 77 2.06447 2.12716 2.55038 0.39173 77 U - - - 1.38629 1.38629 1.38629 1.38629 0.05376 3.64312 3.64312 1.46634 0.26236 1.09861 0.40547 78 2.72405 0.36271 2.40403 1.90884 78 C - - > 1.38629 1.38629 1.38629 1.38629 0.05376 3.64312 3.64312 1.46634 0.26236 1.09861 0.40547 79 0.67396 2.21563 1.34109 2.12303 79 A - - > 1.38629 1.38629 1.38629 1.38629 0.05376 3.64312 3.64312 1.46634 0.26236 1.09861 0.40547 80 2.77746 0.35314 2.42312 1.91951 80 C - - > 1.38629 1.38629 1.38629 1.38629 0.05376 3.64312 3.64312 1.46634 0.26236 1.09861 0.40547 81 2.77866 0.35293 2.42354 1.91974 81 C - - > 1.38629 1.38629 1.38629 1.38629 0.05376 3.64312 3.64312 1.46634 0.26236 1.09861 0.40547 82 2.77982 0.35273 2.42395 1.91997 82 C - - > 1.38629 1.38629 1.38629 1.38629 0.05376 3.64312 3.64312 1.46634 0.26236 1.09861 0.40547 83 2.06447 2.12716 2.55038 0.39173 83 U - - - 1.38629 1.38629 1.38629 1.38629 0.05376 3.64312 3.64312 1.46634 0.26236 1.09861 0.40547 84 2.77739 0.35315 2.42310 1.91949 84 C - - > 1.38629 1.38629 1.38629 1.38629 0.05376 3.64312 3.64312 1.46634 0.26236 1.09861 0.40547 85 2.77856 0.35295 2.42351 1.91972 85 C - - > 1.38629 1.38629 1.38629 1.38629 0.05376 3.64312 3.64312 1.46634 0.26236 1.09861 0.40547 86 2.77970 0.35275 2.42391 1.91994 86 C - - > 1.38629 1.38629 1.38629 1.38629 0.05376 3.64312 3.64312 1.46634 0.26236 1.09861 0.40547 87 2.06447 2.12716 2.55038 0.39173 87 U - - - 1.38629 1.38629 1.38629 1.38629 0.05376 3.64312 3.64312 1.46634 0.26236 1.09861 0.40547 88 2.06447 2.12716 2.55038 0.39173 88 U - - - 1.38629 1.38629 1.38629 1.38629 0.05376 3.64312 3.64312 1.46634 0.26236 1.09861 0.40547 89 2.77969 0.35275 2.42390 1.91994 89 C - - > 1.38629 1.38629 1.38629 1.38629 0.05376 3.64312 3.64312 1.46634 0.26236 1.09861 0.40547 90 0.30381 2.63773 2.42181 2.28555 90 A - - - 1.38629 1.38629 1.38629 1.38629 0.05376 3.64312 3.64312 1.46634 0.26236 1.09861 0.40547 91 2.77529 0.35352 2.42236 1.91908 91 C - - > 1.38629 1.38629 1.38629 1.38629 0.05376 3.64312 3.64312 1.46634 0.26236 1.09861 0.40547 92 2.77599 0.35339 2.42260 1.91922 92 C - - > 1.38629 1.38629 1.38629 1.38629 0.05376 3.64312 3.64312 1.46634 0.26236 1.09861 0.40547 93 2.77652 0.35330 2.42279 1.91932 93 C - - > 1.38629 1.38629 1.38629 1.38629 0.05376 3.64312 3.64312 1.46634 0.26236 1.09861 0.40547 94 2.06447 2.12716 2.55038 0.39173 94 U - - : 1.38629 1.38629 1.38629 1.38629 0.05376 3.64312 3.64312 1.46634 0.26236 1.09861 0.40547 95 2.06447 2.12716 2.55038 0.39173 95 U - - : 1.38629 1.38629 1.38629 1.38629 0.02724 3.61660 * 1.46634 0.26236 0.00000 * //