INFERNAL1/a [1.1.5 | Sep 2023] NAME mir-3940 ACC RF03486 DESC mir-3940 microRNA precursor family STATES 280 NODES 58 CLEN 92 W 107 ALPH RNA RF no CONS yes MAP yes DATE Thu Jul 11 03:20:31 2024 COM [1] /hps/software/users/agb/rfam/bin/cmbuild -F CM SEED COM [2] /hps/software/users/agb/rfam/bin/cmcalibrate --cpu 8 /nfs/production/agb/rfam/15/rescan/families/RF03486/CM PBEGIN 0.05 PEND 0.05 WBETA 1e-07 QDBBETA1 1e-07 QDBBETA2 1e-15 N2OMEGA 1.52588e-05 N3OMEGA 1.52588e-05 ELSELF -0.08926734 NSEQ 2 EFFN 0.566406 CKSUM 2318573855 NULL 0.000 0.000 0.000 0.000 GA 84.00 TC 84.50 NC 81.10 EFP7GF -7.6370 0.71894 ECMLC 0.60526 -5.64599 3.27739 1600000 265950 0.004512 ECMGC 0.35673 -18.49756 -2.73408 1600000 110713 0.003613 ECMLI 0.59238 -3.53977 5.14005 1600000 205217 0.005847 ECMGI 0.40544 -10.38775 1.89781 1600000 58251 0.006867 CM [ ROOT 0 ] - - - - - - S 0 -1 0 1 4 1 1 107 127 -6.242 -6.449 -0.088 -4.863 IL 1 1 2 1 4 1 27 112 131 -1.686 -2.369 -1.117 -4.855 0.000 0.000 0.000 0.000 IR 2 2 3 2 3 1 26 111 130 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 1 ] 1 - G - - - ML 3 2 3 5 5 1 26 107 127 -6.550 -0.057 -6.366 -6.578 -7.470 -0.293 -1.252 1.091 -0.658 D 4 2 3 5 5 0 19 106 126 -4.959 -0.803 -4.221 -2.596 -2.508 IL 5 5 3 5 5 1 24 108 127 -2.408 -0.496 -4.087 -5.920 -5.193 0.000 0.000 0.000 0.000 [ MATP 2 ] 2 92 a u - - MP 6 5 3 10 6 2 26 106 126 -8.877 -8.816 -0.025 -7.593 -7.872 -8.267 -3.062 -2.307 -3.111 2.351 -3.040 -4.091 1.240 -3.161 -3.041 1.954 -3.541 0.063 0.792 -3.422 -0.720 -1.997 ML 7 5 3 10 6 1 21 105 124 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 8 5 3 10 6 1 20 105 124 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 9 5 3 10 6 0 15 102 122 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 10 10 5 10 6 1 23 106 126 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 11 11 6 11 5 1 23 106 125 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 3 ] 3 91 G C - - MP 12 11 6 16 6 2 24 104 124 -8.877 -8.816 -0.025 -7.593 -7.872 -8.267 -3.557 -2.544 -3.608 0.936 -3.555 -4.157 0.826 -3.706 -3.442 3.128 -3.874 -0.231 0.383 -3.666 -1.167 -2.501 ML 13 11 6 16 6 1 20 103 122 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 14 11 6 16 6 1 19 103 122 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 15 11 6 16 6 0 14 101 120 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 16 16 5 16 6 1 22 104 124 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 17 17 6 17 5 1 22 104 123 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 4 ] 4 90 G C - - MP 18 17 6 22 6 2 23 102 122 -8.877 -8.816 -0.025 -7.593 -7.872 -8.267 -3.557 -2.544 -3.608 0.936 -3.555 -4.157 0.826 -3.706 -3.442 3.128 -3.874 -0.231 0.383 -3.666 -1.167 -2.501 ML 19 17 6 22 6 1 18 101 120 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 20 17 6 22 6 1 19 101 120 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 21 17 6 22 6 0 14 99 118 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 22 22 5 22 6 1 20 102 122 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 23 23 6 23 5 1 21 102 121 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 5 ] 5 89 a u - - MP 24 23 6 28 6 2 21 100 120 -8.877 -8.816 -0.025 -7.593 -7.872 -8.267 -3.062 -2.307 -3.111 2.351 -3.040 -4.091 1.240 -3.161 -3.041 1.954 -3.541 0.063 0.792 -3.422 -0.720 -1.997 ML 25 23 6 28 6 1 17 99 119 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 26 23 6 28 6 1 18 99 118 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 27 23 6 28 6 0 13 97 116 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 28 28 5 28 6 1 19 100 120 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 29 29 6 29 5 1 19 100 119 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 6 ] 6 88 a u - - MP 30 29 6 34 4 2 19 98 118 -6.230 -7.476 -0.127 -3.929 -3.062 -2.307 -3.111 2.351 -3.040 -4.091 1.240 -3.161 -3.041 1.954 -3.541 0.063 0.792 -3.422 -0.720 -1.997 ML 31 29 6 34 4 1 15 98 117 -2.408 -4.532 -1.293 -1.473 0.368 -0.385 -0.191 0.094 MR 32 29 6 34 4 1 17 97 117 -4.102 -12.528 -0.390 -2.485 0.368 -0.385 -0.191 0.094 D 33 29 6 34 4 0 12 96 115 -12.737 -14.007 -2.036 -0.404 IL 34 34 5 34 4 1 17 98 117 -2.817 -4.319 -0.613 -2.698 0.000 0.000 0.000 0.000 IR 35 35 6 35 3 1 18 98 118 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 7 ] - 87 - c - - MR 36 35 6 38 5 1 18 96 116 -6.550 -0.057 -6.366 -6.578 -7.470 -0.392 0.889 -1.126 -0.107 D 37 35 6 38 5 0 12 95 114 -5.352 -0.707 -2.978 -4.409 -2.404 IR 38 38 3 38 5 1 16 97 116 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 8 ] 7 86 g c - - MP 39 38 3 43 6 2 18 95 115 -8.877 -8.816 -0.025 -7.593 -7.872 -8.267 -2.590 -0.066 -2.710 1.776 -2.818 -3.577 1.169 -2.945 -2.705 2.148 -3.204 0.132 0.875 -2.874 -0.655 -1.725 ML 40 38 3 43 6 1 13 94 113 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 41 38 3 43 6 1 13 94 113 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 42 38 3 43 6 0 7 91 111 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 43 43 5 43 6 1 15 95 115 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 44 44 6 44 5 1 15 95 114 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 9 ] 8 85 a u - - MP 45 44 6 49 6 2 16 93 113 -8.877 -8.816 -0.025 -7.593 -7.872 -8.267 -3.062 -2.307 -3.111 2.351 -3.040 -4.091 1.240 -3.161 -3.041 1.954 -3.541 0.063 0.792 -3.422 -0.720 -1.997 ML 46 44 6 49 6 1 11 92 111 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 47 44 6 49 6 1 11 92 111 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 48 44 6 49 6 0 6 90 109 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 49 49 5 49 6 1 14 93 113 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 50 50 6 50 5 1 14 93 112 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 10 ] 9 84 G C - - MP 51 50 6 55 6 2 14 91 111 -8.877 -8.816 -0.025 -7.593 -7.872 -8.267 -3.557 -2.544 -3.608 0.936 -3.555 -4.157 0.826 -3.706 -3.442 3.128 -3.874 -0.231 0.383 -3.666 -1.167 -2.501 ML 52 50 6 55 6 1 10 90 110 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 53 50 6 55 6 1 10 90 109 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 54 50 6 55 6 0 6 88 107 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 55 55 5 55 6 1 12 91 111 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 56 56 6 56 5 1 12 91 110 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 11 ] 10 83 a u - - MP 57 56 6 61 4 2 12 89 109 -6.230 -7.476 -0.127 -3.929 -3.062 -2.307 -3.111 2.351 -3.040 -4.091 1.240 -3.161 -3.041 1.954 -3.541 0.063 0.792 -3.422 -0.720 -1.997 ML 58 56 6 61 4 1 8 89 108 -2.408 -4.532 -1.293 -1.473 0.368 -0.385 -0.191 0.094 MR 59 56 6 61 4 1 9 88 108 -4.102 -12.528 -0.390 -2.485 0.368 -0.385 -0.191 0.094 D 60 56 6 61 4 0 5 86 106 -12.737 -14.007 -2.036 -0.404 IL 61 61 5 61 4 1 10 89 108 -2.817 -4.319 -0.613 -2.698 0.000 0.000 0.000 0.000 IR 62 62 6 62 3 1 11 89 109 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 12 ] - 82 - c - - MR 63 62 6 65 3 1 11 87 107 -7.764 -0.028 -6.082 -0.392 0.889 -1.126 -0.107 D 64 62 6 65 3 0 5 86 105 -6.390 -1.568 -0.620 IR 65 65 3 65 3 1 10 88 108 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 13 ] - 81 - A - - MR 66 65 3 68 3 1 11 86 106 -7.764 -0.028 -6.082 1.241 -1.159 -0.901 -0.615 D 67 65 3 68 3 0 4 85 104 -6.390 -1.568 -0.620 IR 68 68 3 68 3 1 9 87 107 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 14 ] - 80 - U - - MR 69 68 3 71 3 1 10 85 105 -7.764 -0.028 -6.082 -0.412 -0.639 -1.057 1.088 D 70 68 3 71 3 0 3 84 103 -6.390 -1.568 -0.620 IR 71 71 3 71 3 1 9 86 106 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 15 ] - 79 - u - - MR 72 71 3 74 5 1 10 84 104 -6.550 -0.057 -6.366 -6.578 -7.470 -0.222 0.186 -0.932 0.567 D 73 71 3 74 5 0 3 83 102 -5.352 -0.707 -2.978 -4.409 -2.404 IR 74 74 3 74 5 1 7 85 104 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 16 ] 11 78 c g - - MP 75 74 3 79 6 2 11 83 103 -8.877 -8.816 -0.025 -7.593 -7.872 -8.267 -3.094 -2.917 -3.007 0.649 -2.143 -3.600 2.115 -2.788 -3.042 1.091 -3.436 -0.922 1.460 -3.251 1.717 -1.961 ML 76 74 3 79 6 1 4 82 101 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 77 74 3 79 6 1 4 82 101 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 78 74 3 79 6 0 0 79 99 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 79 79 5 79 6 1 6 83 102 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 80 80 6 80 5 1 6 83 102 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 17 ] 12 77 c g - - MP 81 80 6 85 6 2 11 81 101 -8.877 -8.816 -0.025 -7.593 -7.872 -8.267 -3.461 -3.201 -3.312 0.434 -2.343 -3.857 2.949 -3.021 -3.344 0.966 -3.699 -1.119 1.252 -3.585 -0.041 -2.228 ML 82 80 6 85 6 1 4 80 99 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 83 80 6 85 6 1 4 80 99 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 84 80 6 85 6 0 0 77 97 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 85 85 5 85 6 1 5 81 100 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 86 86 6 86 5 1 6 81 100 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 18 ] 13 76 g c - - MP 87 86 6 91 6 2 10 79 99 -8.877 -8.816 -0.025 -7.593 -7.872 -8.267 -2.987 -2.110 -3.087 1.425 -3.251 -4.078 1.017 -3.201 -2.962 2.204 -3.462 1.709 0.647 -3.378 -0.924 -1.957 ML 88 86 6 91 6 1 4 78 97 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 89 86 6 91 6 1 4 78 97 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 90 86 6 91 6 0 0 75 95 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 91 91 5 91 6 1 5 79 98 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 92 92 6 92 5 1 5 79 98 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 19 ] 14 75 a u - - MP 93 92 6 97 6 2 9 77 97 -8.877 -8.816 -0.025 -7.593 -7.872 -8.267 -3.062 -2.307 -3.111 2.351 -3.040 -4.091 1.240 -3.161 -3.041 1.954 -3.541 0.063 0.792 -3.422 -0.720 -1.997 ML 94 92 6 97 6 1 3 76 95 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 95 92 6 97 6 1 3 76 95 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 96 92 6 97 6 0 0 73 93 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 97 97 5 97 6 1 5 77 96 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 98 98 6 98 5 1 5 77 96 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 20 ] 15 74 G C - - MP 99 98 6 103 6 2 7 75 95 -8.877 -8.816 -0.025 -7.593 -7.872 -8.267 -3.557 -2.544 -3.608 0.936 -3.555 -4.157 0.826 -3.706 -3.442 3.128 -3.874 -0.231 0.383 -3.666 -1.167 -2.501 ML 100 98 6 103 6 1 3 74 93 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 101 98 6 103 6 1 3 74 93 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 102 98 6 103 6 0 0 71 91 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 103 103 5 103 6 1 4 75 94 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 104 104 6 104 5 1 4 75 94 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 21 ] 16 73 G C - - MP 105 104 6 109 6 2 5 73 93 -8.877 -8.816 -0.025 -7.593 -7.872 -8.267 -3.557 -2.544 -3.608 0.936 -3.555 -4.157 0.826 -3.706 -3.442 3.128 -3.874 -0.231 0.383 -3.666 -1.167 -2.501 ML 106 104 6 109 6 1 2 72 91 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 107 104 6 109 6 1 2 72 91 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 108 104 6 109 6 0 0 70 89 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 109 109 5 109 6 1 3 73 92 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 110 110 6 110 5 1 3 73 92 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 22 ] 17 72 u a - - MP 111 110 6 115 4 2 4 71 91 -6.230 -7.476 -0.127 -3.929 -3.237 -2.948 -3.159 0.667 -2.347 -3.792 1.952 -2.953 -3.179 1.199 -3.586 -0.845 2.446 -3.402 -0.045 -2.075 ML 112 110 6 115 4 1 1 71 90 -2.408 -4.532 -1.293 -1.473 0.368 -0.385 -0.191 0.094 MR 113 110 6 115 4 1 2 70 90 -4.102 -12.528 -0.390 -2.485 0.368 -0.385 -0.191 0.094 D 114 110 6 115 4 0 0 68 88 -12.737 -14.007 -2.036 -0.404 IL 115 115 5 115 4 1 2 71 90 -2.817 -4.319 -0.613 -2.698 0.000 0.000 0.000 0.000 IR 116 116 6 116 3 1 3 71 91 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 23 ] - 71 - u - - MR 117 116 6 119 3 1 3 69 89 -7.764 -0.028 -6.082 -0.222 0.186 -0.932 0.567 D 118 116 6 119 3 0 0 68 87 -6.390 -1.568 -0.620 IR 119 119 3 119 3 1 2 70 89 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 24 ] - 70 - U - - MR 120 119 3 122 3 1 3 68 88 -7.764 -0.028 -6.082 -0.412 -0.639 -1.057 1.088 D 121 119 3 122 3 0 0 67 86 -6.390 -1.568 -0.620 IR 122 122 3 122 3 1 2 69 88 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 25 ] - 69 - c - - MR 123 122 3 125 3 1 2 67 87 -7.764 -0.028 -6.082 -0.392 0.889 -1.126 -0.107 D 124 122 3 125 3 0 0 66 85 -6.390 -1.568 -0.620 IR 125 125 3 125 3 1 1 68 87 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 26 ] - 68 - A - - MR 126 125 3 128 5 1 2 66 86 -6.550 -0.057 -6.366 -6.578 -7.470 1.241 -1.159 -0.901 -0.615 D 127 125 3 128 5 0 0 65 84 -5.352 -0.707 -2.978 -4.409 -2.404 IR 128 128 3 128 5 1 1 67 86 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 27 ] 18 67 G C - - MP 129 128 3 133 6 2 3 65 85 -8.877 -8.816 -0.025 -7.593 -7.872 -8.267 -3.557 -2.544 -3.608 0.936 -3.555 -4.157 0.826 -3.706 -3.442 3.128 -3.874 -0.231 0.383 -3.666 -1.167 -2.501 ML 130 128 3 133 6 1 1 64 83 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 131 128 3 133 6 1 1 64 83 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 132 128 3 133 6 0 0 61 81 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 133 133 5 133 6 1 1 65 84 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 134 134 6 134 5 1 1 65 84 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 28 ] 19 66 G C - - MP 135 134 6 139 6 2 3 63 83 -8.877 -8.816 -0.025 -7.593 -7.872 -8.267 -3.557 -2.544 -3.608 0.936 -3.555 -4.157 0.826 -3.706 -3.442 3.128 -3.874 -0.231 0.383 -3.666 -1.167 -2.501 ML 136 134 6 139 6 1 1 62 81 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 137 134 6 139 6 1 1 62 81 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 138 134 6 139 6 0 0 59 79 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 139 139 5 139 6 1 1 63 82 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 140 140 6 140 5 1 1 63 82 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 29 ] 20 65 G C - - MP 141 140 6 145 6 2 3 61 81 -8.877 -8.816 -0.025 -7.593 -7.872 -8.267 -3.557 -2.544 -3.608 0.936 -3.555 -4.157 0.826 -3.706 -3.442 3.128 -3.874 -0.231 0.383 -3.666 -1.167 -2.501 ML 142 140 6 145 6 1 1 60 79 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 143 140 6 145 6 1 1 60 79 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 144 140 6 145 6 0 0 57 77 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 145 145 5 145 6 1 1 61 80 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 146 146 6 146 5 1 1 61 80 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 30 ] 21 64 c g - - MP 147 146 6 151 6 2 3 59 79 -8.877 -8.816 -0.025 -7.593 -7.872 -8.267 -3.094 -2.917 -3.007 0.649 -2.143 -3.600 2.115 -2.788 -3.042 1.091 -3.436 -0.922 1.460 -3.251 1.717 -1.961 ML 148 146 6 151 6 1 1 58 77 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 149 146 6 151 6 1 1 58 77 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 150 146 6 151 6 0 0 55 75 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 151 151 5 151 6 1 1 59 78 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 152 152 6 152 5 1 1 59 78 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 31 ] 22 63 u a - - MP 153 152 6 157 6 2 2 57 77 -8.877 -8.816 -0.025 -7.593 -7.872 -8.267 -3.237 -2.948 -3.159 0.667 -2.347 -3.792 1.952 -2.953 -3.179 1.199 -3.586 -0.845 2.446 -3.402 -0.045 -2.075 ML 154 152 6 157 6 1 1 56 75 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 155 152 6 157 6 1 1 56 75 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 156 152 6 157 6 0 0 53 73 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 157 157 5 157 6 1 1 57 76 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 158 158 6 158 5 1 1 57 76 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 32 ] 23 62 G C - - MP 159 158 6 163 6 2 2 55 75 -8.877 -8.816 -0.025 -7.593 -7.872 -8.267 -3.557 -2.544 -3.608 0.936 -3.555 -4.157 0.826 -3.706 -3.442 3.128 -3.874 -0.231 0.383 -3.666 -1.167 -2.501 ML 160 158 6 163 6 1 1 54 73 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 161 158 6 163 6 1 1 54 73 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 162 158 6 163 6 0 0 51 71 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 163 163 5 163 6 1 1 55 74 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 164 164 6 164 5 1 1 55 74 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 33 ] 24 61 G C - - MP 165 164 6 169 6 2 2 53 73 -8.877 -8.816 -0.025 -7.593 -7.872 -8.267 -3.557 -2.544 -3.608 0.936 -3.555 -4.157 0.826 -3.706 -3.442 3.128 -3.874 -0.231 0.383 -3.666 -1.167 -2.501 ML 166 164 6 169 6 1 1 52 71 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 167 164 6 169 6 1 1 52 71 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 168 164 6 169 6 0 0 49 69 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 169 169 5 169 6 1 1 53 72 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 170 170 6 170 5 1 1 53 72 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 34 ] 25 60 G C - - MP 171 170 6 175 6 2 2 51 71 -8.877 -8.816 -0.025 -7.593 -7.872 -8.267 -3.557 -2.544 -3.608 0.936 -3.555 -4.157 0.826 -3.706 -3.442 3.128 -3.874 -0.231 0.383 -3.666 -1.167 -2.501 ML 172 170 6 175 6 1 1 50 69 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 173 170 6 175 6 1 1 50 69 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 174 170 6 175 6 0 0 48 67 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 175 175 5 175 6 1 1 51 70 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 176 176 6 176 5 1 1 51 70 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 35 ] 26 59 g c - - MP 177 176 6 181 4 2 2 49 69 -6.230 -7.476 -0.127 -3.929 -2.987 -2.110 -3.087 1.425 -3.251 -4.078 1.017 -3.201 -2.962 2.204 -3.462 1.709 0.647 -3.378 -0.924 -1.957 ML 178 176 6 181 4 1 1 49 68 -2.408 -4.532 -1.293 -1.473 0.368 -0.385 -0.191 0.094 MR 179 176 6 181 4 1 1 48 68 -4.102 -12.528 -0.390 -2.485 0.368 -0.385 -0.191 0.094 D 180 176 6 181 4 0 0 46 66 -12.737 -14.007 -2.036 -0.404 IL 181 181 5 181 4 1 1 49 68 -2.817 -4.319 -0.613 -2.698 0.000 0.000 0.000 0.000 IR 182 182 6 182 3 1 1 49 68 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 36 ] - 58 - A - - MR 183 182 6 185 3 1 1 47 67 -7.764 -0.028 -6.082 1.241 -1.159 -0.901 -0.615 D 184 182 6 185 3 0 0 46 65 -6.390 -1.568 -0.620 IR 185 185 3 185 3 1 1 48 67 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 37 ] - 57 - G - - MR 186 185 3 188 5 1 1 46 66 -6.550 -0.057 -6.366 -6.578 -7.470 -0.293 -1.252 1.091 -0.658 D 187 185 3 188 5 0 0 45 64 -5.352 -0.707 -2.978 -4.409 -2.404 IR 188 188 3 188 5 1 1 47 66 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 38 ] 27 56 c g - - MP 189 188 3 193 6 2 2 45 65 -8.877 -8.816 -0.025 -7.593 -7.872 -8.267 -3.461 -3.201 -3.312 0.434 -2.343 -3.857 2.949 -3.021 -3.344 0.966 -3.699 -1.119 1.252 -3.585 -0.041 -2.228 ML 190 188 3 193 6 1 1 44 63 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 191 188 3 193 6 1 1 44 63 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 192 188 3 193 6 0 0 41 61 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 193 193 5 193 6 1 1 45 64 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 194 194 6 194 5 1 1 45 64 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 39 ] 28 55 G C - - MP 195 194 6 199 6 2 2 43 63 -8.877 -8.816 -0.025 -7.593 -7.872 -8.267 -3.557 -2.544 -3.608 0.936 -3.555 -4.157 0.826 -3.706 -3.442 3.128 -3.874 -0.231 0.383 -3.666 -1.167 -2.501 ML 196 194 6 199 6 1 1 42 61 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 197 194 6 199 6 1 1 42 61 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 198 194 6 199 6 0 0 39 59 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 199 199 5 199 6 1 1 43 62 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 200 200 6 200 5 1 1 43 62 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 40 ] 29 54 G C - - MP 201 200 6 205 6 2 2 41 61 -8.877 -8.816 -0.025 -7.593 -7.872 -8.267 -3.557 -2.544 -3.608 0.936 -3.555 -4.157 0.826 -3.706 -3.442 3.128 -3.874 -0.231 0.383 -3.666 -1.167 -2.501 ML 202 200 6 205 6 1 1 40 59 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 203 200 6 205 6 1 1 40 59 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 204 200 6 205 6 0 0 37 57 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 205 205 5 205 6 1 1 41 60 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 206 206 6 206 5 1 1 41 60 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 41 ] 30 53 G C - - MP 207 206 6 211 6 2 2 39 59 -8.877 -8.816 -0.025 -7.593 -7.872 -8.267 -3.557 -2.544 -3.608 0.936 -3.555 -4.157 0.826 -3.706 -3.442 3.128 -3.874 -0.231 0.383 -3.666 -1.167 -2.501 ML 208 206 6 211 6 1 1 38 57 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 209 206 6 211 6 1 1 38 57 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 210 206 6 211 6 0 0 36 55 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 211 211 5 211 6 1 1 39 58 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 212 212 6 212 5 1 1 39 58 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 42 ] 31 52 c g - - MP 213 212 6 217 6 2 2 37 57 -8.877 -8.816 -0.025 -7.593 -7.872 -8.267 -3.461 -3.201 -3.312 0.434 -2.343 -3.857 2.949 -3.021 -3.344 0.966 -3.699 -1.119 1.252 -3.585 -0.041 -2.228 ML 214 212 6 217 6 1 1 36 56 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 215 212 6 217 6 1 1 36 56 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 216 212 6 217 6 0 0 34 54 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 217 217 5 217 6 1 1 37 56 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 218 218 6 218 5 1 1 37 56 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 43 ] 32 51 u a - - MP 219 218 6 223 4 2 2 35 55 -6.242 -6.449 -0.088 -4.863 -3.237 -2.948 -3.159 0.667 -2.347 -3.792 1.952 -2.953 -3.179 1.199 -3.586 -0.845 2.446 -3.402 -0.045 -2.075 ML 220 218 6 223 4 1 1 35 55 -3.758 -3.940 -0.507 -2.670 0.368 -0.385 -0.191 0.094 MR 221 218 6 223 4 1 1 35 54 -4.809 -3.838 -1.706 -0.766 0.368 -0.385 -0.191 0.094 D 222 218 6 223 4 0 0 34 53 -4.568 -4.250 -2.265 -0.520 IL 223 223 5 223 4 1 1 37 56 -1.686 -2.369 -1.117 -4.855 0.000 0.000 0.000 0.000 IR 224 224 6 224 3 1 1 36 55 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 44 ] 33 - c - - - ML 225 224 6 227 3 1 1 32 51 -7.764 -0.028 -6.082 -0.392 0.889 -1.126 -0.107 D 226 224 6 227 3 0 0 31 50 -5.620 -0.734 -1.403 IL 227 227 3 227 3 1 1 33 52 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 45 ] - 50 - c - - MR 228 227 3 230 5 1 1 31 50 -6.550 -0.057 -6.366 -6.578 -7.470 -0.392 0.889 -1.126 -0.107 D 229 227 3 230 5 0 0 30 49 -5.352 -0.707 -2.978 -4.409 -2.404 IR 230 230 3 230 5 1 1 32 51 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 46 ] 34 49 u a - - MP 231 230 3 235 6 2 2 30 49 -8.877 -8.816 -0.025 -7.593 -7.872 -8.267 -3.237 -2.948 -3.159 0.667 -2.347 -3.792 1.952 -2.953 -3.179 1.199 -3.586 -0.845 2.446 -3.402 -0.045 -2.075 ML 232 230 3 235 6 1 1 29 48 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 233 230 3 235 6 1 1 29 48 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 234 230 3 235 6 0 0 27 46 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 235 235 5 235 6 1 1 30 49 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 236 236 6 236 5 1 1 30 49 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 47 ] 35 48 G C - - MP 237 236 6 241 6 2 2 28 47 -8.877 -8.816 -0.025 -7.593 -7.872 -8.267 -3.557 -2.544 -3.608 0.936 -3.555 -4.157 0.826 -3.706 -3.442 3.128 -3.874 -0.231 0.383 -3.666 -1.167 -2.501 ML 238 236 6 241 6 1 1 27 46 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 239 236 6 241 6 1 1 27 46 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 240 236 6 241 6 0 0 25 44 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 241 241 5 241 6 1 1 28 47 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 242 242 6 242 5 1 1 28 47 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 48 ] 36 47 g c - - MP 243 242 6 247 6 2 2 26 45 -8.877 -8.816 -0.025 -7.593 -7.872 -8.267 -2.987 -2.110 -3.087 1.425 -3.251 -4.078 1.017 -3.201 -2.962 2.204 -3.462 1.709 0.647 -3.378 -0.924 -1.957 ML 244 242 6 247 6 1 1 25 44 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 245 242 6 247 6 1 1 25 44 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 246 242 6 247 6 0 0 23 42 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 247 247 5 247 6 1 1 26 45 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 248 248 6 248 5 1 1 26 45 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 49 ] 37 46 G C - - MP 249 248 6 253 6 2 2 24 43 -8.877 -8.816 -0.025 -7.593 -7.872 -8.267 -3.557 -2.544 -3.608 0.936 -3.555 -4.157 0.826 -3.706 -3.442 3.128 -3.874 -0.231 0.383 -3.666 -1.167 -2.501 ML 250 248 6 253 6 1 1 24 43 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 251 248 6 253 6 1 1 23 43 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 252 248 6 253 6 0 0 22 41 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 253 253 5 253 6 1 1 24 43 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 254 254 6 254 5 1 1 24 43 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 50 ] 38 45 g c - - MP 255 254 6 259 4 2 2 22 41 -6.242 -6.449 -0.088 -4.863 -2.987 -2.110 -3.087 1.425 -3.251 -4.078 1.017 -3.201 -2.962 2.204 -3.462 1.709 0.647 -3.378 -0.924 -1.957 ML 256 254 6 259 4 1 1 23 42 -3.758 -3.940 -0.507 -2.670 0.368 -0.385 -0.191 0.094 MR 257 254 6 259 4 1 1 22 41 -4.809 -3.838 -1.706 -0.766 0.368 -0.385 -0.191 0.094 D 258 254 6 259 4 0 0 21 40 -4.568 -4.250 -2.265 -0.520 IL 259 259 5 259 4 1 1 24 43 -1.686 -2.369 -1.117 -4.855 0.000 0.000 0.000 0.000 IR 260 260 6 260 3 1 1 23 42 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 51 ] 39 - a - - - ML 261 260 6 263 3 1 1 19 38 -7.322 -0.032 -5.976 0.564 -0.894 0.231 -0.304 D 262 260 6 263 3 0 0 18 37 -6.174 -1.687 -0.566 IL 263 263 3 263 3 1 1 22 41 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 52 ] 40 - U - - - ML 264 263 3 266 3 1 1 18 37 -7.322 -0.032 -5.976 -0.412 -0.639 -1.057 1.088 D 265 263 3 266 3 0 0 17 36 -6.174 -1.687 -0.566 IL 266 266 3 266 3 1 1 21 40 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 53 ] 41 - U - - - ML 267 266 3 269 3 1 1 17 35 -7.322 -0.032 -5.976 -0.412 -0.639 -1.057 1.088 D 268 266 3 269 3 0 0 16 35 -6.174 -1.687 -0.566 IL 269 269 3 269 3 1 1 20 39 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 54 ] 42 - U - - - ML 270 269 3 272 3 1 1 15 34 -7.322 -0.032 -5.976 -0.412 -0.639 -1.057 1.088 D 271 269 3 272 3 0 0 15 33 -6.174 -1.687 -0.566 IL 272 272 3 272 3 1 1 19 37 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 55 ] 43 - G - - - ML 273 272 3 275 3 1 1 13 32 -7.322 -0.032 -5.976 -0.293 -1.252 1.091 -0.658 D 274 272 3 275 3 0 0 13 32 -6.174 -1.687 -0.566 IL 275 275 3 275 3 1 1 18 36 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 56 ] 44 - G - - - ML 276 275 3 278 2 1 1 1 1 * 0.000 -0.293 -1.252 1.091 -0.658 D 277 275 3 278 2 0 0 0 0 * 0.000 IL 278 278 3 278 2 1 1 13 28 -1.823 -0.479 0.000 0.000 0.000 0.000 [ END 57 ] - - - - - - E 279 278 3 -1 0 0 0 0 0 // HMMER3/f [3.4 | Aug 2023] NAME mir-3940 ACC RF03486 DESC mir-3940 microRNA precursor family LENG 92 MAXL 191 ALPH RNA RF no MM no CONS yes CS yes MAP yes DATE Thu Jul 11 03:20:31 2024 COM [1] /hps/software/users/agb/rfam/bin/cmbuild -F CM SEED COM [2] /hps/software/users/agb/rfam/bin/cmcalibrate --cpu 8 /nfs/production/agb/rfam/15/rescan/families/RF03486/CM NSEQ 2 EFFN 1.433594 CKSUM 2318573855 STATS LOCAL MSV -9.0097 0.71894 STATS LOCAL VITERBI -10.0857 0.71894 STATS LOCAL FORWARD -3.5607 0.71894 HMM A C G U m->m m->i m->d i->m i->i d->m d->d COMPO 1.69957 1.29334 1.17924 1.44658 1.38629 1.38629 1.38629 1.38629 0.05276 3.66136 3.66136 1.46634 0.26236 0.00000 * 1 2.18307 2.97790 0.27651 2.55130 1 G - - : 1.38629 1.38629 1.38629 1.38629 0.05276 3.66136 3.66136 1.46634 0.26236 1.09861 0.40547 2 0.60255 2.23758 1.45252 2.19024 2 A - - < 1.38629 1.38629 1.38629 1.38629 0.05276 3.66136 3.66136 1.46634 0.26236 1.09861 0.40547 3 2.27923 2.72173 0.27062 2.67404 3 G - - < 1.38629 1.38629 1.38629 1.38629 0.05276 3.66136 3.66136 1.46634 0.26236 1.09861 0.40547 4 2.27915 2.72165 0.27065 2.67392 4 G - - < 1.38629 1.38629 1.38629 1.38629 0.05276 3.66136 3.66136 1.46634 0.26236 1.09861 0.40547 5 0.60254 2.23760 1.45252 2.19027 5 A - - < 1.38629 1.38629 1.38629 1.38629 0.05276 3.66136 3.66136 1.46634 0.26236 1.09861 0.40547 6 0.60261 2.23748 1.45253 2.19006 6 A - - < 1.38629 1.38629 1.38629 1.38629 0.05276 3.66136 3.66136 1.46634 0.26236 1.09861 0.40547 7 0.86637 2.05916 1.18920 1.91394 7 a - - < 1.38629 1.38629 1.38629 1.38629 0.05276 3.66136 3.66136 1.46634 0.26236 1.09861 0.40547 8 0.60403 2.23474 1.45275 2.18528 8 A - - < 1.38629 1.38629 1.38629 1.38629 0.05276 3.66136 3.66136 1.46634 0.26236 1.09861 0.40547 9 2.27432 2.71736 0.27226 2.66749 9 G - - < 1.38629 1.38629 1.38629 1.38629 0.05276 3.66136 3.66136 1.46634 0.26236 1.09861 0.40547 10 0.60313 2.23646 1.45261 2.18829 10 A - - < 1.38629 1.38629 1.38629 1.38629 0.05276 3.66136 3.66136 1.46634 0.26236 1.09861 0.40547 11 2.48888 1.36497 2.22014 0.59237 11 U - - < 1.38629 1.38629 1.38629 1.38629 0.05276 3.66136 3.66136 1.46634 0.26236 1.09861 0.40547 12 2.71698 0.39472 2.42575 1.76234 12 C - - < 1.38629 1.38629 1.38629 1.38629 0.05276 3.66136 3.66136 1.46634 0.26236 1.09861 0.40547 13 1.72890 2.40238 0.45851 2.30469 13 G - - < 1.38629 1.38629 1.38629 1.38629 0.05276 3.66136 3.66136 1.46634 0.26236 1.09861 0.40547 14 0.60281 2.23709 1.45256 2.18938 14 A - - < 1.38629 1.38629 1.38629 1.38629 0.05276 3.66136 3.66136 1.46634 0.26236 1.09861 0.40547 15 2.27764 2.72031 0.27115 2.67191 15 G - - < 1.38629 1.38629 1.38629 1.38629 0.05276 3.66136 3.66136 1.46634 0.26236 1.09861 0.40547 16 2.27759 2.72026 0.27117 2.67184 16 G - - < 1.38629 1.38629 1.38629 1.38629 0.05276 3.66136 3.66136 1.46634 0.26236 1.09861 0.40547 17 2.48661 1.56225 2.17126 0.52237 17 U - - < 1.38629 1.38629 1.38629 1.38629 0.05276 3.66136 3.66136 1.46634 0.26236 1.09861 0.40547 18 2.27144 2.71480 0.27322 2.66367 18 G - - < 1.38629 1.38629 1.38629 1.38629 0.05276 3.66136 3.66136 1.46634 0.26236 1.09861 0.40547 19 2.27525 2.71819 0.27195 2.66873 19 G - - < 1.38629 1.38629 1.38629 1.38629 0.05276 3.66136 3.66136 1.46634 0.26236 1.09861 0.40547 20 2.27688 2.71964 0.27140 2.67091 20 G - - < 1.38629 1.38629 1.38629 1.38629 0.05276 3.66136 3.66136 1.46634 0.26236 1.09861 0.40547 21 2.49716 1.36426 2.22305 0.59089 21 U - - < 1.38629 1.38629 1.38629 1.38629 0.05276 3.66136 3.66136 1.46634 0.26236 1.09861 0.40547 22 2.48686 1.56224 2.17134 0.52233 22 U - - < 1.38629 1.38629 1.38629 1.38629 0.05276 3.66136 3.66136 1.46634 0.26236 1.09861 0.40547 23 2.27759 2.72027 0.27117 2.67185 23 G - - < 1.38629 1.38629 1.38629 1.38629 0.05276 3.66136 3.66136 1.46634 0.26236 1.09861 0.40547 24 2.27746 2.72015 0.27121 2.67168 24 G - - < 1.38629 1.38629 1.38629 1.38629 0.05276 3.66136 3.66136 1.46634 0.26236 1.09861 0.40547 25 2.27732 2.72003 0.27126 2.67149 25 G - - < 1.38629 1.38629 1.38629 1.38629 0.05276 3.66136 3.66136 1.46634 0.26236 1.09861 0.40547 26 1.72901 2.40254 0.45841 2.30494 26 G - - < 1.38629 1.38629 1.38629 1.38629 0.05276 3.66136 3.66136 1.46634 0.26236 1.09861 0.40547 27 2.70282 0.39735 2.42034 1.76031 27 C - - < 1.38629 1.38629 1.38629 1.38629 0.05276 3.66136 3.66136 1.46634 0.26236 1.09861 0.40547 28 2.27288 2.71609 0.27274 2.66559 28 G - - < 1.38629 1.38629 1.38629 1.38629 0.05276 3.66136 3.66136 1.46634 0.26236 1.09861 0.40547 29 2.27541 2.71833 0.27189 2.66895 29 G - - < 1.38629 1.38629 1.38629 1.38629 0.05276 3.66136 3.66136 1.46634 0.26236 1.09861 0.40547 30 2.27651 2.71931 0.27153 2.67042 30 G - - < 1.38629 1.38629 1.38629 1.38629 0.05276 3.66136 3.66136 1.46634 0.26236 1.09861 0.40547 31 2.72011 0.39414 2.42694 1.76278 31 C - - < 1.38629 1.38629 1.38629 1.38629 0.05276 3.66136 3.66136 1.46634 0.26236 1.09861 0.40547 32 2.48609 1.56227 2.17110 0.52247 32 U - - < 1.38629 1.38629 1.38629 1.38629 0.05276 3.66136 3.66136 1.46634 0.26236 1.09861 0.40547 33 2.26258 0.37056 2.81889 1.92482 33 C - - - 1.38629 1.38629 1.38629 1.38629 0.05276 3.66136 3.66136 1.46634 0.26236 1.09861 0.40547 34 2.48312 1.56236 2.17014 0.52304 34 U - - < 1.38629 1.38629 1.38629 1.38629 0.05276 3.66136 3.66136 1.46634 0.26236 1.09861 0.40547 35 2.27724 2.71996 0.27128 2.67139 35 G - - < 1.38629 1.38629 1.38629 1.38629 0.05276 3.66136 3.66136 1.46634 0.26236 1.09861 0.40547 36 1.72938 2.40303 0.45812 2.30568 36 G - - < 1.38629 1.38629 1.38629 1.38629 0.05276 3.66136 3.66136 1.46634 0.26236 1.09861 0.40547 37 2.27832 2.72092 0.27093 2.67283 37 G - - < 1.38629 1.38629 1.38629 1.38629 0.05276 3.66136 3.66136 1.46634 0.26236 1.09861 0.40547 38 1.72942 2.40309 0.45809 2.30576 38 G - - < 1.38629 1.38629 1.38629 1.38629 0.05276 3.66136 3.66136 1.46634 0.26236 1.09861 0.40547 39 0.92594 2.23767 1.09035 1.82613 39 a - - _ 1.38629 1.38629 1.38629 1.38629 0.05276 3.66136 3.66136 1.46634 0.26236 1.09861 0.40547 40 2.16453 2.20776 2.65793 0.34934 40 U - - _ 1.38629 1.38629 1.38629 1.38629 0.05276 3.66136 3.66136 1.46634 0.26236 1.09861 0.40547 41 2.16453 2.20776 2.65793 0.34934 41 U - - _ 1.38629 1.38629 1.38629 1.38629 0.05276 3.66136 3.66136 1.46634 0.26236 1.09861 0.40547 42 2.16453 2.20776 2.65793 0.34934 42 U - - _ 1.38629 1.38629 1.38629 1.38629 0.05276 3.66136 3.66136 1.46634 0.26236 1.09861 0.40547 43 2.18307 2.97790 0.27651 2.55130 43 G - - _ 1.38629 1.38629 1.38629 1.38629 0.05276 3.66136 3.66136 1.46634 0.26236 1.09861 0.40547 44 2.18307 2.97790 0.27651 2.55130 44 G - - _ 1.38629 1.38629 1.38629 1.38629 0.05276 3.66136 3.66136 1.46634 0.26236 1.09861 0.40547 45 2.52784 1.51185 2.21181 0.52736 45 U - - > 1.38629 1.38629 1.38629 1.38629 0.05276 3.66136 3.66136 1.46634 0.26236 1.09861 0.40547 46 2.89558 0.31539 2.55014 1.98664 46 C - - > 1.38629 1.38629 1.38629 1.38629 0.05276 3.66136 3.66136 1.46634 0.26236 1.09861 0.40547 47 2.52946 1.51178 2.21234 0.52706 47 U - - > 1.38629 1.38629 1.38629 1.38629 0.05276 3.66136 3.66136 1.46634 0.26236 1.09861 0.40547 48 2.89858 0.31493 2.55125 1.98722 48 C - - > 1.38629 1.38629 1.38629 1.38629 0.05276 3.66136 3.66136 1.46634 0.26236 1.09861 0.40547 49 0.59543 2.34714 1.39840 2.24396 49 A - - > 1.38629 1.38629 1.38629 1.38629 0.05276 3.66136 3.66136 1.46634 0.26236 1.09861 0.40547 50 2.26258 0.37056 2.81889 1.92482 50 C - - - 1.38629 1.38629 1.38629 1.38629 0.05276 3.66136 3.66136 1.46634 0.26236 1.09861 0.40547 51 0.59621 2.34525 1.39861 2.24110 51 A - - > 1.38629 1.38629 1.38629 1.38629 0.05276 3.66136 3.66136 1.46634 0.26236 1.09861 0.40547 52 2.03490 2.59232 0.34176 2.47768 52 G - - > 1.38629 1.38629 1.38629 1.38629 0.05276 3.66136 3.66136 1.46634 0.26236 1.09861 0.40547 53 2.89231 0.31589 2.54891 1.98600 53 C - - > 1.38629 1.38629 1.38629 1.38629 0.05276 3.66136 3.66136 1.46634 0.26236 1.09861 0.40547 54 2.89298 0.31579 2.54916 1.98613 54 C - - > 1.38629 1.38629 1.38629 1.38629 0.05276 3.66136 3.66136 1.46634 0.26236 1.09861 0.40547 55 2.89366 0.31568 2.54942 1.98626 55 C - - > 1.38629 1.38629 1.38629 1.38629 0.05276 3.66136 3.66136 1.46634 0.26236 1.09861 0.40547 56 2.03568 2.59314 0.34139 2.47883 56 G - - > 1.38629 1.38629 1.38629 1.38629 0.05276 3.66136 3.66136 1.46634 0.26236 1.09861 0.40547 57 2.18307 2.97790 0.27651 2.55130 57 G - - - 1.38629 1.38629 1.38629 1.38629 0.05276 3.66136 3.66136 1.46634 0.26236 1.09861 0.40547 58 0.26654 2.75106 2.52397 2.40821 58 A - - - 1.38629 1.38629 1.38629 1.38629 0.05276 3.66136 3.66136 1.46634 0.26236 1.09861 0.40547 59 2.52554 1.51195 2.21105 0.52777 59 U - - > 1.38629 1.38629 1.38629 1.38629 0.05276 3.66136 3.66136 1.46634 0.26236 1.09861 0.40547 60 2.89121 0.31606 2.54850 1.98578 60 C - - > 1.38629 1.38629 1.38629 1.38629 0.05276 3.66136 3.66136 1.46634 0.26236 1.09861 0.40547 61 2.89175 0.31597 2.54870 1.98589 61 C - - > 1.38629 1.38629 1.38629 1.38629 0.05276 3.66136 3.66136 1.46634 0.26236 1.09861 0.40547 62 2.89240 0.31587 2.54894 1.98601 62 C - - > 1.38629 1.38629 1.38629 1.38629 0.05276 3.66136 3.66136 1.46634 0.26236 1.09861 0.40547 63 0.59604 2.34565 1.39857 2.24171 63 A - - > 1.38629 1.38629 1.38629 1.38629 0.05276 3.66136 3.66136 1.46634 0.26236 1.09861 0.40547 64 1.83766 2.39243 0.43965 2.25242 64 G - - > 1.38629 1.38629 1.38629 1.38629 0.05276 3.66136 3.66136 1.46634 0.26236 1.09861 0.40547 65 2.89515 0.31545 2.54997 1.98655 65 C - - > 1.38629 1.38629 1.38629 1.38629 0.05276 3.66136 3.66136 1.46634 0.26236 1.09861 0.40547 66 2.89633 0.31527 2.55041 1.98678 66 C - - > 1.38629 1.38629 1.38629 1.38629 0.05276 3.66136 3.66136 1.46634 0.26236 1.09861 0.40547 67 2.89758 0.31508 2.55088 1.98703 67 C - - > 1.38629 1.38629 1.38629 1.38629 0.05276 3.66136 3.66136 1.46634 0.26236 1.09861 0.40547 68 0.26654 2.75106 2.52397 2.40821 68 A - - - 1.38629 1.38629 1.38629 1.38629 0.05276 3.66136 3.66136 1.46634 0.26236 1.09861 0.40547 69 2.26258 0.37056 2.81889 1.92482 69 C - - - 1.38629 1.38629 1.38629 1.38629 0.05276 3.66136 3.66136 1.46634 0.26236 1.09861 0.40547 70 2.16453 2.20776 2.65793 0.34934 70 U - - - 1.38629 1.38629 1.38629 1.38629 0.05276 3.66136 3.66136 1.46634 0.26236 1.09861 0.40547 71 1.76679 1.12138 2.29177 0.91080 71 u - - - 1.38629 1.38629 1.38629 1.38629 0.05276 3.66136 3.66136 1.46634 0.26236 1.09861 0.40547 72 0.59616 2.34536 1.39860 2.24126 72 A - - > 1.38629 1.38629 1.38629 1.38629 0.05276 3.66136 3.66136 1.46634 0.26236 1.09861 0.40547 73 2.89238 0.31588 2.54894 1.98601 73 C - - > 1.38629 1.38629 1.38629 1.38629 0.05276 3.66136 3.66136 1.46634 0.26236 1.09861 0.40547 74 2.89316 0.31576 2.54923 1.98616 74 C - - > 1.38629 1.38629 1.38629 1.38629 0.05276 3.66136 3.66136 1.46634 0.26236 1.09861 0.40547 75 2.42235 1.69385 2.05439 0.51198 75 U - - > 1.38629 1.38629 1.38629 1.38629 0.05276 3.66136 3.66136 1.46634 0.26236 1.09861 0.40547 76 2.52829 1.51183 2.21196 0.52727 76 U - - > 1.38629 1.38629 1.38629 1.38629 0.05276 3.66136 3.66136 1.46634 0.26236 1.09861 0.40547 77 2.03629 2.59380 0.34110 2.47975 77 G - - > 1.38629 1.38629 1.38629 1.38629 0.05276 3.66136 3.66136 1.46634 0.26236 1.09861 0.40547 78 1.83840 2.39321 0.43918 2.25352 78 G - - > 1.38629 1.38629 1.38629 1.38629 0.05276 3.66136 3.66136 1.46634 0.26236 1.09861 0.40547 79 1.76679 1.12138 2.29177 0.91080 79 u - - - 1.38629 1.38629 1.38629 1.38629 0.05276 3.66136 3.66136 1.46634 0.26236 1.09861 0.40547 80 2.16453 2.20776 2.65793 0.34934 80 U - - - 1.38629 1.38629 1.38629 1.38629 0.05276 3.66136 3.66136 1.46634 0.26236 1.09861 0.40547 81 0.26654 2.75106 2.52397 2.40821 81 A - - - 1.38629 1.38629 1.38629 1.38629 0.05276 3.66136 3.66136 1.46634 0.26236 1.09861 0.40547 82 2.26258 0.37056 2.81889 1.92482 82 C - - - 1.38629 1.38629 1.38629 1.38629 0.05276 3.66136 3.66136 1.46634 0.26236 1.09861 0.40547 83 2.42067 1.69382 2.05394 0.51234 83 U - - > 1.38629 1.38629 1.38629 1.38629 0.05276 3.66136 3.66136 1.46634 0.26236 1.09861 0.40547 84 2.89136 0.31603 2.54856 1.98581 84 C - - > 1.38629 1.38629 1.38629 1.38629 0.05276 3.66136 3.66136 1.46634 0.26236 1.09861 0.40547 85 2.42105 1.69383 2.05404 0.51226 85 U - - > 1.38629 1.38629 1.38629 1.38629 0.05276 3.66136 3.66136 1.46634 0.26236 1.09861 0.40547 86 2.14306 1.00353 1.86803 1.01696 86 c - - > 1.38629 1.38629 1.38629 1.38629 0.05276 3.66136 3.66136 1.46634 0.26236 1.09861 0.40547 87 2.26258 0.37056 2.81889 1.92482 87 C - - - 1.38629 1.38629 1.38629 1.38629 0.05276 3.66136 3.66136 1.46634 0.26236 1.09861 0.40547 88 2.42204 1.69384 2.05431 0.51205 88 U - - > 1.38629 1.38629 1.38629 1.38629 0.05276 3.66136 3.66136 1.46634 0.26236 1.09861 0.40547 89 2.42219 1.69385 2.05435 0.51202 89 U - - > 1.38629 1.38629 1.38629 1.38629 0.05276 3.66136 3.66136 1.46634 0.26236 1.09861 0.40547 90 2.89348 0.31571 2.54935 1.98623 90 C - - > 1.38629 1.38629 1.38629 1.38629 0.05276 3.66136 3.66136 1.46634 0.26236 1.09861 0.40547 91 2.89196 0.31594 2.54878 1.98593 91 C - - > 1.38629 1.38629 1.38629 1.38629 0.05276 3.66136 3.66136 1.46634 0.26236 1.09861 0.40547 92 2.41906 1.69380 2.05350 0.51268 92 U - - > 1.38629 1.38629 1.38629 1.38629 0.02673 3.63532 * 1.46634 0.26236 0.00000 * //