INFERNAL1/a [1.1.5 | Sep 2023] NAME mir-7360 ACC RF03476 DESC mir-7360 microRNA precursor family STATES 181 NODES 38 CLEN 59 W 75 ALPH RNA RF no CONS yes MAP yes DATE Tue Jul 9 22:19:02 2024 COM [1] /hps/software/users/agb/rfam/bin/cmbuild -F CM SEED COM [2] /hps/software/users/agb/rfam/bin/cmcalibrate --cpu 8 /nfs/production/agb/rfam/RELEASES/15.0/microrna/updates/RF03476/CM PBEGIN 0.05 PEND 0.05 WBETA 1e-07 QDBBETA1 1e-07 QDBBETA2 1e-15 N2OMEGA 1.52588e-05 N3OMEGA 1.52588e-05 ELSELF -0.08926734 NSEQ 2 EFFN 1.683594 CKSUM 2922839688 NULL 0.000 0.000 0.000 0.000 GA 47.00 TC 47.30 NC 46.20 EFP7GF -5.5014 0.72734 ECMLC 0.63873 -4.80424 4.35748 1600000 417468 0.002874 ECMGC 0.41783 -14.23510 0.87361 1600000 220648 0.001813 ECMLI 0.60885 -3.65571 5.37559 1600000 293262 0.004092 ECMGI 0.47011 -8.48394 3.93978 1600000 137588 0.002907 CM [ ROOT 0 ] - - - - - - S 0 -1 0 1 4 1 1 75 94 -6.769 -8.014 -0.087 -4.468 IL 1 1 2 1 4 1 4 76 96 -2.817 -4.319 -0.613 -2.698 0.000 0.000 0.000 0.000 IR 2 2 3 2 3 1 5 76 96 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 1 ] - 59 - U - - MR 3 2 3 5 3 1 6 75 94 -8.265 -0.020 -6.582 -1.309 -1.337 -2.033 1.564 D 4 2 3 5 3 0 1 73 93 -6.390 -1.568 -0.620 IR 5 5 3 5 3 1 5 75 95 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 2 ] - 58 - C - - MR 6 5 3 8 5 1 6 74 93 -7.009 -0.041 -6.825 -7.037 -7.929 -1.509 1.555 -2.324 -0.970 D 7 5 3 8 5 0 0 72 92 -5.352 -0.707 -2.978 -4.409 -2.404 IR 8 8 3 8 5 1 3 74 94 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 3 ] 1 57 U A - - MP 9 8 3 13 6 2 6 73 92 -9.069 -9.008 -0.022 -7.784 -8.064 -8.459 -3.992 -3.810 -3.852 -0.120 -2.838 -4.434 1.486 -3.519 -3.859 0.165 -4.242 -1.716 3.224 -4.151 -0.518 -2.702 ML 10 8 3 13 6 1 2 71 91 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 11 8 3 13 6 1 2 71 91 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 12 8 3 13 6 0 0 69 89 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 13 13 5 13 6 1 3 72 92 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 14 14 6 14 5 1 3 72 92 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 4 ] 2 56 C G - - MP 15 14 6 19 6 2 5 71 90 -9.069 -9.008 -0.022 -7.784 -8.064 -8.459 -4.357 -4.245 -4.078 -0.495 -2.840 -4.515 3.487 -3.631 -4.122 -0.226 -4.403 -2.190 0.693 -4.438 -0.543 -2.969 ML 16 14 6 19 6 1 2 70 90 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 17 14 6 19 6 1 2 70 89 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 18 14 6 19 6 0 0 68 88 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 19 19 5 19 6 1 2 70 90 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 20 20 6 20 5 1 2 70 90 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 5 ] 3 55 C G - - MP 21 20 6 25 4 2 3 69 88 -6.843 -7.051 -0.057 -5.465 -4.357 -4.245 -4.078 -0.495 -2.840 -4.515 3.487 -3.631 -4.122 -0.226 -4.403 -2.190 0.693 -4.438 -0.543 -2.969 ML 22 20 6 25 4 1 1 69 89 -3.758 -3.940 -0.507 -2.670 0.368 -0.385 -0.191 0.094 MR 23 20 6 25 4 1 1 68 88 -4.809 -3.838 -1.706 -0.766 0.368 -0.385 -0.191 0.094 D 24 20 6 25 4 0 0 67 87 -4.568 -4.250 -2.265 -0.520 IL 25 25 5 25 4 1 2 70 90 -1.686 -2.369 -1.117 -4.855 0.000 0.000 0.000 0.000 IR 26 26 6 26 3 1 2 69 89 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 6 ] 4 - U - - - ML 27 26 6 29 3 1 2 66 86 -7.868 -0.022 -6.522 -1.309 -1.337 -2.033 1.564 D 28 26 6 29 3 0 0 65 84 -6.174 -1.687 -0.566 IL 29 29 3 29 3 1 1 68 88 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 7 ] 5 - U - - - ML 30 29 3 32 3 1 2 65 84 -8.265 -0.020 -6.582 -1.309 -1.337 -2.033 1.564 D 31 29 3 32 3 0 0 64 83 -5.620 -0.734 -1.403 IL 32 32 3 32 3 1 1 66 85 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 8 ] - 54 - U - - MR 33 32 3 35 3 1 1 64 83 -8.265 -0.020 -6.582 -1.309 -1.337 -2.033 1.564 D 34 32 3 35 3 0 0 63 82 -6.390 -1.568 -0.620 IR 35 35 3 35 3 1 1 65 84 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 9 ] - 53 - U - - MR 36 35 3 38 5 1 1 63 82 -7.009 -0.041 -6.825 -7.037 -7.929 -1.309 -1.337 -2.033 1.564 D 37 35 3 38 5 0 0 62 81 -5.352 -0.707 -2.978 -4.409 -2.404 IR 38 38 3 38 5 1 1 63 83 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 10 ] 6 52 U A - - MP 39 38 3 43 6 2 2 62 81 -9.069 -9.008 -0.022 -7.784 -8.064 -8.459 -3.992 -3.810 -3.852 -0.120 -2.838 -4.434 1.486 -3.519 -3.859 0.165 -4.242 -1.716 3.224 -4.151 -0.518 -2.702 ML 40 38 3 43 6 1 1 61 80 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 41 38 3 43 6 1 1 61 80 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 42 38 3 43 6 0 0 58 78 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 43 43 5 43 6 1 1 62 81 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 44 44 6 44 5 1 1 61 81 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 11 ] 7 51 C G - - MP 45 44 6 49 6 2 2 60 79 -9.069 -9.008 -0.022 -7.784 -8.064 -8.459 -4.357 -4.245 -4.078 -0.495 -2.840 -4.515 3.487 -3.631 -4.122 -0.226 -4.403 -2.190 0.693 -4.438 -0.543 -2.969 ML 46 44 6 49 6 1 1 59 78 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 47 44 6 49 6 1 1 59 78 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 48 44 6 49 6 0 0 56 76 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 49 49 5 49 6 1 1 60 79 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 50 50 6 50 5 1 1 59 79 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 12 ] 8 50 U A - - MP 51 50 6 55 6 2 2 58 77 -9.069 -9.008 -0.022 -7.784 -8.064 -8.459 -3.992 -3.810 -3.852 -0.120 -2.838 -4.434 1.486 -3.519 -3.859 0.165 -4.242 -1.716 3.224 -4.151 -0.518 -2.702 ML 52 50 6 55 6 1 1 57 76 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 53 50 6 55 6 1 1 57 76 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 54 50 6 55 6 0 0 55 74 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 55 55 5 55 6 1 1 58 77 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 56 56 6 56 5 1 1 57 77 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 13 ] 9 49 G C - - MP 57 56 6 61 6 2 2 56 75 -9.069 -9.008 -0.022 -7.784 -8.064 -8.459 -4.556 -3.006 -4.640 0.322 -4.971 -4.620 -0.382 -4.868 -4.204 3.590 -4.555 -0.699 -0.772 -4.346 -2.409 -3.520 ML 58 56 6 61 6 1 1 55 75 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 59 56 6 61 6 1 1 55 75 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 60 56 6 61 6 0 0 53 73 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 61 61 5 61 6 1 1 56 75 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 62 62 6 62 5 1 1 56 75 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 14 ] 10 48 U A - - MP 63 62 6 67 4 2 2 54 73 -6.843 -7.051 -0.057 -5.465 -3.992 -3.810 -3.852 -0.120 -2.838 -4.434 1.486 -3.519 -3.859 0.165 -4.242 -1.716 3.224 -4.151 -0.518 -2.702 ML 64 62 6 67 4 1 1 55 74 -3.758 -3.940 -0.507 -2.670 0.368 -0.385 -0.191 0.094 MR 65 62 6 67 4 1 1 54 74 -4.809 -3.838 -1.706 -0.766 0.368 -0.385 -0.191 0.094 D 66 62 6 67 4 0 0 53 73 -4.568 -4.250 -2.265 -0.520 IL 67 67 5 67 4 1 1 56 75 -1.686 -2.369 -1.117 -4.855 0.000 0.000 0.000 0.000 IR 68 68 6 68 3 1 1 55 74 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 15 ] 11 - A - - - ML 69 68 6 71 5 1 1 52 71 -7.009 -0.041 -6.825 -7.037 -7.929 1.674 -2.177 -1.829 -1.701 D 70 68 6 71 5 0 0 50 69 -4.959 -0.803 -4.221 -2.596 -2.508 IL 71 71 3 71 5 1 1 52 71 -2.408 -0.496 -4.087 -5.920 -5.193 0.000 0.000 0.000 0.000 [ MATP 16 ] 12 47 G C - - MP 72 71 3 76 6 2 2 51 70 -9.069 -9.008 -0.022 -7.784 -8.064 -8.459 -4.556 -3.006 -4.640 0.322 -4.971 -4.620 -0.382 -4.868 -4.204 3.590 -4.555 -0.699 -0.772 -4.346 -2.409 -3.520 ML 73 71 3 76 6 1 1 49 68 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 74 71 3 76 6 1 1 49 68 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 75 71 3 76 6 0 0 47 66 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 76 76 5 76 6 1 1 50 69 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 77 77 6 77 5 1 1 50 69 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 17 ] 13 46 g u - - MP 78 77 6 82 6 2 2 49 68 -9.069 -9.008 -0.022 -7.784 -8.064 -8.459 -3.496 -2.312 -3.652 1.205 -4.269 -4.996 0.101 -3.692 -3.348 1.520 -3.863 2.944 -0.259 -4.228 -1.840 -2.379 ML 79 77 6 82 6 1 1 47 66 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 80 77 6 82 6 1 1 47 66 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 81 77 6 82 6 0 0 45 64 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 82 82 5 82 6 1 1 48 67 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 83 83 6 83 5 1 1 48 67 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 18 ] 14 45 U A - - MP 84 83 6 88 6 2 2 47 66 -9.069 -9.008 -0.022 -7.784 -8.064 -8.459 -3.992 -3.810 -3.852 -0.120 -2.838 -4.434 1.486 -3.519 -3.859 0.165 -4.242 -1.716 3.224 -4.151 -0.518 -2.702 ML 85 83 6 88 6 1 1 45 64 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 86 83 6 88 6 1 1 45 64 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 87 83 6 88 6 0 0 43 62 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 88 88 5 88 6 1 1 46 65 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 89 89 6 89 5 1 1 46 65 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 19 ] 15 44 A U - - MP 90 89 6 94 6 2 2 45 64 -9.069 -9.008 -0.022 -7.784 -8.064 -8.459 -3.636 -2.708 -3.665 3.220 -3.927 -4.976 0.363 -3.717 -3.564 1.247 -4.104 -0.211 -0.055 -4.189 -1.578 -2.509 ML 91 89 6 94 6 1 1 43 62 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 92 89 6 94 6 1 1 43 62 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 93 89 6 94 6 0 0 41 60 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 94 94 5 94 6 1 1 44 63 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 95 95 6 95 5 1 1 44 63 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 20 ] 16 43 u g - - MP 96 95 6 100 6 2 2 43 62 -9.069 -9.008 -0.022 -7.784 -8.064 -8.459 -3.896 -3.809 -3.643 -0.163 -2.463 -4.100 1.818 -3.217 -3.681 0.064 -3.994 -1.816 0.998 -4.000 2.871 -2.563 ML 97 95 6 100 6 1 1 41 60 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 98 95 6 100 6 1 1 41 60 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 99 95 6 100 6 0 0 39 58 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 100 100 5 100 6 1 1 42 61 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 101 101 6 101 5 1 1 42 61 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 21 ] 17 42 A U - - MP 102 101 6 106 6 2 2 41 60 -9.069 -9.008 -0.022 -7.784 -8.064 -8.459 -3.636 -2.708 -3.665 3.220 -3.927 -4.976 0.363 -3.717 -3.564 1.247 -4.104 -0.211 -0.055 -4.189 -1.578 -2.509 ML 103 101 6 106 6 1 1 39 58 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 104 101 6 106 6 1 1 39 58 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 105 101 6 106 6 0 0 37 56 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 106 106 5 106 6 1 1 40 59 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 107 107 6 107 5 1 1 40 59 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 22 ] 18 41 A U - - MP 108 107 6 112 6 2 2 39 58 -9.069 -9.008 -0.022 -7.784 -8.064 -8.459 -3.636 -2.708 -3.665 3.220 -3.927 -4.976 0.363 -3.717 -3.564 1.247 -4.104 -0.211 -0.055 -4.189 -1.578 -2.509 ML 109 107 6 112 6 1 1 37 56 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 110 107 6 112 6 1 1 37 56 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 111 107 6 112 6 0 0 35 54 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 112 112 5 112 6 1 1 38 57 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 113 113 6 113 5 1 1 38 57 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 23 ] 19 40 U A - - MP 114 113 6 118 6 2 2 37 56 -9.069 -9.008 -0.022 -7.784 -8.064 -8.459 -3.992 -3.810 -3.852 -0.120 -2.838 -4.434 1.486 -3.519 -3.859 0.165 -4.242 -1.716 3.224 -4.151 -0.518 -2.702 ML 115 113 6 118 6 1 1 35 54 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 116 113 6 118 6 1 1 35 54 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 117 113 6 118 6 0 0 33 52 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 118 118 5 118 6 1 1 36 55 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 119 119 6 119 5 1 1 36 55 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 24 ] 20 39 A U - - MP 120 119 6 124 6 2 2 35 54 -9.069 -9.008 -0.022 -7.784 -8.064 -8.459 -3.636 -2.708 -3.665 3.220 -3.927 -4.976 0.363 -3.717 -3.564 1.247 -4.104 -0.211 -0.055 -4.189 -1.578 -2.509 ML 121 119 6 124 6 1 1 34 53 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 122 119 6 124 6 1 1 34 53 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 123 119 6 124 6 0 0 32 51 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 124 124 5 124 6 1 1 34 53 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 125 125 6 125 5 1 1 34 53 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 25 ] 21 38 U A - - MP 126 125 6 130 4 2 2 33 52 -6.843 -7.051 -0.057 -5.465 -3.992 -3.810 -3.852 -0.120 -2.838 -4.434 1.486 -3.519 -3.859 0.165 -4.242 -1.716 3.224 -4.151 -0.518 -2.702 ML 127 125 6 130 4 1 1 33 52 -3.758 -3.940 -0.507 -2.670 0.368 -0.385 -0.191 0.094 MR 128 125 6 130 4 1 1 33 52 -4.809 -3.838 -1.706 -0.766 0.368 -0.385 -0.191 0.094 D 129 125 6 130 4 0 0 32 51 -4.568 -4.250 -2.265 -0.520 IL 130 130 5 130 4 1 1 35 54 -1.686 -2.369 -1.117 -4.855 0.000 0.000 0.000 0.000 IR 131 131 6 131 3 1 1 33 53 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 26 ] 22 - u - - - ML 132 131 6 134 5 1 1 30 49 -7.009 -0.041 -6.825 -7.037 -7.929 -0.629 0.425 -1.398 0.706 D 133 131 6 134 5 0 0 29 47 -4.959 -0.803 -4.221 -2.596 -2.508 IL 134 134 3 134 5 1 1 30 49 -2.408 -0.496 -4.087 -5.920 -5.193 0.000 0.000 0.000 0.000 [ MATP 27 ] 23 37 U A - - MP 135 134 3 139 6 2 2 29 48 -9.069 -9.008 -0.022 -7.784 -8.064 -8.459 -3.992 -3.810 -3.852 -0.120 -2.838 -4.434 1.486 -3.519 -3.859 0.165 -4.242 -1.716 3.224 -4.151 -0.518 -2.702 ML 136 134 3 139 6 1 1 27 46 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 137 134 3 139 6 1 1 27 46 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 138 134 3 139 6 0 0 25 44 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 139 139 5 139 6 1 1 29 47 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 140 140 6 140 5 1 1 28 47 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 28 ] 24 36 U A - - MP 141 140 6 145 6 2 2 27 46 -9.069 -9.008 -0.022 -7.784 -8.064 -8.459 -3.992 -3.810 -3.852 -0.120 -2.838 -4.434 1.486 -3.519 -3.859 0.165 -4.242 -1.716 3.224 -4.151 -0.518 -2.702 ML 142 140 6 145 6 1 1 25 44 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 143 140 6 145 6 1 1 25 44 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 144 140 6 145 6 0 0 23 42 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 145 145 5 145 6 1 1 27 45 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 146 146 6 146 5 1 1 26 45 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 29 ] 25 35 A U - - MP 147 146 6 151 6 2 2 25 44 -9.069 -9.008 -0.022 -7.784 -8.064 -8.459 -3.636 -2.708 -3.665 3.220 -3.927 -4.976 0.363 -3.717 -3.564 1.247 -4.104 -0.211 -0.055 -4.189 -1.578 -2.509 ML 148 146 6 151 6 1 1 24 42 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 149 146 6 151 6 1 1 24 42 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 150 146 6 151 6 0 0 21 40 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 151 151 5 151 6 1 1 25 43 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 152 152 6 152 5 1 1 24 43 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 30 ] 26 34 A U - - MP 153 152 6 157 6 2 2 23 42 -9.069 -9.008 -0.022 -7.784 -8.064 -8.459 -3.636 -2.708 -3.665 3.220 -3.927 -4.976 0.363 -3.717 -3.564 1.247 -4.104 -0.211 -0.055 -4.189 -1.578 -2.509 ML 154 152 6 157 6 1 1 22 41 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 155 152 6 157 6 1 1 22 41 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 156 152 6 157 6 0 0 21 39 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 157 157 5 157 6 1 1 23 42 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 158 158 6 158 5 1 1 22 41 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 31 ] 27 33 U A - - MP 159 158 6 163 4 2 2 21 40 -6.843 -7.051 -0.057 -5.465 -3.992 -3.810 -3.852 -0.120 -2.838 -4.434 1.486 -3.519 -3.859 0.165 -4.242 -1.716 3.224 -4.151 -0.518 -2.702 ML 160 158 6 163 4 1 1 22 41 -3.758 -3.940 -0.507 -2.670 0.368 -0.385 -0.191 0.094 MR 161 158 6 163 4 1 1 21 40 -4.809 -3.838 -1.706 -0.766 0.368 -0.385 -0.191 0.094 D 162 158 6 163 4 0 0 20 39 -4.568 -4.250 -2.265 -0.520 IL 163 163 5 163 4 1 1 23 42 -1.686 -2.369 -1.117 -4.855 0.000 0.000 0.000 0.000 IR 164 164 6 164 3 1 1 22 41 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 32 ] 28 - A - - - ML 165 164 6 167 3 1 1 18 36 -7.868 -0.022 -6.522 1.674 -2.177 -1.829 -1.701 D 166 164 6 167 3 0 0 17 36 -6.174 -1.687 -0.566 IL 167 167 3 167 3 1 1 21 40 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 33 ] 29 - A - - - ML 168 167 3 170 3 1 1 16 35 -7.868 -0.022 -6.522 1.674 -2.177 -1.829 -1.701 D 169 167 3 170 3 0 0 16 34 -6.174 -1.687 -0.566 IL 170 170 3 170 3 1 1 20 38 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 34 ] 30 - A - - - ML 171 170 3 173 3 1 1 15 33 -7.868 -0.022 -6.522 1.674 -2.177 -1.829 -1.701 D 172 170 3 173 3 0 0 15 33 -6.174 -1.687 -0.566 IL 173 173 3 173 3 1 1 19 37 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 35 ] 31 - A - - - ML 174 173 3 176 3 1 1 13 32 -7.868 -0.022 -6.522 1.674 -2.177 -1.829 -1.701 D 175 173 3 176 3 0 0 13 32 -6.174 -1.687 -0.566 IL 176 176 3 176 3 1 1 18 36 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 36 ] 32 - A - - - ML 177 176 3 179 2 1 1 1 1 * 0.000 1.674 -2.177 -1.829 -1.701 D 178 176 3 179 2 0 0 0 0 * 0.000 IL 179 179 3 179 2 1 1 13 28 -1.823 -0.479 0.000 0.000 0.000 0.000 [ END 37 ] - - - - - - E 180 179 3 -1 0 0 0 0 0 // HMMER3/f [3.4 | Aug 2023] NAME mir-7360 ACC RF03476 DESC mir-7360 microRNA precursor family LENG 59 MAXL 145 ALPH RNA RF no MM no CONS yes CS yes MAP yes DATE Tue Jul 9 22:19:02 2024 COM [1] /hps/software/users/agb/rfam/bin/cmbuild -F CM SEED COM [2] /hps/software/users/agb/rfam/bin/cmcalibrate --cpu 8 /nfs/production/agb/rfam/RELEASES/15.0/microrna/updates/RF03476/CM NSEQ 2 EFFN 1.933594 CKSUM 2922839688 STATS LOCAL MSV -8.4080 0.72734 STATS LOCAL VITERBI -9.0472 0.72734 STATS LOCAL FORWARD -3.0337 0.72734 HMM A C G U m->m m->i m->d i->m i->i d->m d->d COMPO 1.20112 1.70657 1.63081 1.13355 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 0.00000 * 1 2.73948 1.74231 2.46923 0.39211 1 U - - < 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 2 2.98358 0.29770 2.73470 1.95227 2 C - - < 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 3 2.98652 0.29729 2.73600 1.95275 3 C - - < 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 4 2.41823 2.41534 2.92688 0.26394 4 U - - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 5 2.41823 2.41534 2.92688 0.26394 5 U - - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 6 2.74606 1.74246 2.47184 0.39112 6 U - - < 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 7 2.98874 0.29699 2.73698 1.95311 7 C - - < 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 8 2.74947 1.74254 2.47319 0.39060 8 U - - < 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 9 2.45381 3.02538 0.20564 2.96876 9 G - - < 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 10 2.74898 1.74253 2.47300 0.39068 10 U - - < 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 11 0.19430 3.03244 2.77709 2.71550 11 A - - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 12 2.45332 3.02485 0.20577 2.96801 12 G - - < 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 13 1.83082 2.68622 0.36354 2.57221 13 G - - < 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 14 2.74899 1.74253 2.47300 0.39068 14 U - - < 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 15 0.43773 2.52974 1.65918 2.47071 15 A - - < 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 16 2.75003 1.47965 2.51448 0.46609 16 U - - < 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 17 0.43784 2.52943 1.65914 2.47024 17 A - - < 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 18 0.43789 2.52929 1.65913 2.47002 18 A - - < 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 19 2.74697 1.74248 2.47220 0.39098 19 U - - < 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 20 0.43797 2.52907 1.65911 2.46969 20 A - - < 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 21 2.74643 1.74247 2.47199 0.39106 21 U - - < 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 22 1.87631 1.06538 2.41572 0.88444 22 u - - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 23 2.74794 1.74251 2.47259 0.39083 23 U - - < 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 24 2.74861 1.74252 2.47285 0.39073 24 U - - < 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 25 0.43773 2.52974 1.65918 2.47071 25 A - - < 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 26 0.43777 2.52963 1.65917 2.47055 26 A - - < 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 27 2.74790 1.74250 2.47257 0.39084 27 U - - < 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 28 0.19430 3.03244 2.77709 2.71550 28 A - - _ 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 29 0.19430 3.03244 2.77709 2.71550 29 A - - _ 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 30 0.19430 3.03244 2.77709 2.71550 30 A - - _ 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 31 0.19430 3.03244 2.77709 2.71550 31 A - - _ 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 32 0.19430 3.03244 2.77709 2.71550 32 A - - _ 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 33 0.44440 2.65187 1.57931 2.49913 33 A - - > 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 34 2.69722 1.92952 2.34286 0.36913 34 U - - > 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 35 2.69564 1.92939 2.34232 0.36938 35 U - - > 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 36 0.44514 2.64933 1.57921 2.49581 36 A - - > 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 37 0.44603 2.64627 1.57910 2.49180 37 A - - > 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 38 0.44445 2.65170 1.57930 2.49891 38 A - - > 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 39 2.69770 1.92956 2.34302 0.36905 39 U - - > 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 40 0.44439 2.65191 1.57931 2.49918 40 A - - > 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 41 2.69816 1.92960 2.34318 0.36898 41 U - - > 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 42 2.69830 1.92961 2.34323 0.36895 42 U - - > 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 43 1.99395 2.68766 0.33761 2.49703 43 G - - > 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 44 2.69779 1.92957 2.34305 0.36903 44 U - - > 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 45 0.44458 2.65125 1.57928 2.49833 45 A - - > 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 46 2.78015 1.73540 2.48635 0.38798 46 U - - > 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 47 3.15742 0.24438 2.84714 2.15189 47 C - - > 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 48 0.44399 2.65330 1.57936 2.50101 48 A - - > 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 49 3.18303 0.24148 2.85785 2.15687 49 C - - > 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 50 0.44367 2.65441 1.57940 2.50246 50 A - - > 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 51 2.23095 2.90729 0.25612 2.75042 51 G - - > 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 52 0.44316 2.65619 1.57946 2.50479 52 A - - > 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 53 2.41823 2.41534 2.92688 0.26394 53 U - - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 54 2.41823 2.41534 2.92688 0.26394 54 U - - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 55 2.22927 2.90518 0.25672 2.74775 55 G - - > 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 56 2.22999 2.90609 0.25646 2.74889 56 G - - > 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 57 0.44345 2.65516 1.57943 2.50345 57 A - - > 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 58 2.59600 0.25971 3.16713 2.18902 58 C - - : 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 59 2.41823 2.41534 2.92688 0.26394 59 U - - : 1.38629 1.38629 1.38629 1.38629 0.02469 3.71357 * 1.46634 0.26236 0.00000 * //