INFERNAL1/a [1.1.5 | Sep 2023] NAME mir-3036 ACC RF03463 DESC mir-3036 microRNA precursor family STATES 178 NODES 40 CLEN 58 W 73 ALPH RNA RF no CONS yes MAP yes DATE Sun Jul 7 06:09:14 2024 COM [1] /hps/software/users/agb/rfam/bin/cmbuild -F CM SEED COM [2] /hps/software/users/agb/rfam/bin/cmcalibrate --cpu 8 /nfs/production/agb/rfam/RELEASES/15.0/microrna/updates/RF03463/CM PBEGIN 0.05 PEND 0.05 WBETA 1e-07 QDBBETA1 1e-07 QDBBETA2 1e-15 N2OMEGA 1.52588e-05 N3OMEGA 1.52588e-05 ELSELF -0.08926734 NSEQ 3 EFFN 1.813477 CKSUM 759394024 NULL 0.000 0.000 0.000 0.000 GA 70.00 TC 72.60 NC 48.70 EFP7GF -10.0537 0.71937 ECMLC 0.61432 -4.65901 4.60989 1600000 356537 0.003366 ECMGC 0.43641 -13.37521 1.32908 1600000 244886 0.001633 ECMLI 0.58804 -3.41162 5.77094 1600000 265607 0.004518 ECMGI 0.44884 -9.57058 3.96990 1600000 174365 0.002294 CM [ ROOT 0 ] - - - - - - S 0 -1 0 1 4 1 1 73 93 -6.820 -8.065 -0.083 -4.519 IL 1 1 2 1 4 1 2 75 94 -2.817 -4.319 -0.613 -2.698 0.000 0.000 0.000 0.000 IR 2 2 3 2 3 1 3 75 94 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 1 ] - 58 - U - - MR 3 2 3 5 3 1 4 73 93 -8.313 -0.019 -6.631 -1.403 -1.414 -2.133 1.594 D 4 2 3 5 3 0 0 72 91 -6.390 -1.568 -0.620 IR 5 5 3 5 3 1 2 74 93 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 2 ] - 57 - A - - MR 6 5 3 8 5 1 4 72 92 -7.054 -0.040 -6.870 -7.082 -7.974 1.699 -2.281 -1.922 -1.815 D 7 5 3 8 5 0 0 71 90 -5.352 -0.707 -2.978 -4.409 -2.404 IR 8 8 3 8 5 1 1 73 92 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 3 ] 1 56 A U - - MP 9 8 3 13 6 2 5 71 91 -9.089 -9.028 -0.021 -7.805 -8.085 -8.480 -3.720 -2.770 -3.744 3.283 -4.046 -5.102 0.249 -3.790 -3.638 1.156 -4.183 -0.258 -0.169 -4.302 -1.693 -2.582 ML 10 8 3 13 6 1 1 70 89 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 11 8 3 13 6 1 1 70 89 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 12 8 3 13 6 0 0 67 87 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 13 13 5 13 6 1 1 71 90 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 14 14 6 14 5 1 1 71 90 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 4 ] 2 55 U A - - MP 15 14 6 19 6 2 4 69 89 -9.089 -9.028 -0.021 -7.805 -8.085 -8.480 -4.099 -3.922 -3.948 -0.223 -2.909 -4.520 1.417 -3.599 -3.953 0.044 -4.331 -1.824 3.283 -4.254 -0.588 -2.786 ML 16 14 6 19 6 1 1 68 87 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 17 14 6 19 6 1 1 68 87 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 18 14 6 19 6 0 0 66 85 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 19 19 5 19 6 1 1 69 88 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 20 20 6 20 5 1 1 69 88 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 5 ] 3 54 U A - - MP 21 20 6 25 6 2 4 67 87 -9.089 -9.028 -0.021 -7.805 -8.085 -8.480 -4.099 -3.922 -3.948 -0.223 -2.909 -4.520 1.417 -3.599 -3.953 0.044 -4.331 -1.824 3.283 -4.254 -0.588 -2.786 ML 22 20 6 25 6 1 1 66 86 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 23 20 6 25 6 1 1 66 86 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 24 20 6 25 6 0 0 65 84 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 25 25 5 25 6 1 1 67 86 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 26 26 6 26 5 1 1 67 86 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 6 ] 4 53 G C - - MP 27 26 6 31 4 2 2 65 85 -6.900 -7.107 -0.055 -5.521 -4.658 -3.054 -4.750 0.256 -5.115 -4.661 -0.500 -4.986 -4.273 3.617 -4.616 -0.750 -0.888 -4.413 -2.533 -3.628 ML 28 26 6 31 4 1 1 66 85 -3.758 -3.940 -0.507 -2.670 0.368 -0.385 -0.191 0.094 MR 29 26 6 31 4 1 1 65 85 -4.809 -3.838 -1.706 -0.766 0.368 -0.385 -0.191 0.094 D 30 26 6 31 4 0 0 64 84 -4.568 -4.250 -2.265 -0.520 IL 31 31 5 31 4 1 1 67 87 -1.686 -2.369 -1.117 -4.855 0.000 0.000 0.000 0.000 IR 32 32 6 32 3 1 1 66 86 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 7 ] 5 - G - - - ML 33 32 6 35 3 1 1 63 82 -8.313 -0.019 -6.631 -1.485 -2.690 1.701 -2.076 D 34 32 6 35 3 0 0 61 81 -5.620 -0.734 -1.403 IL 35 35 3 35 3 1 1 64 83 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 8 ] - 52 - g - - MR 36 35 3 38 5 1 1 62 81 -7.054 -0.040 -6.870 -7.082 -7.974 -0.349 -0.264 0.721 -0.446 D 37 35 3 38 5 0 0 60 80 -5.352 -0.707 -2.978 -4.409 -2.404 IR 38 38 3 38 5 1 1 62 81 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 9 ] 6 51 U A - - MP 39 38 3 43 6 2 2 61 80 -9.089 -9.028 -0.021 -7.805 -8.085 -8.480 -4.099 -3.922 -3.948 -0.223 -2.909 -4.520 1.417 -3.599 -3.953 0.044 -4.331 -1.824 3.283 -4.254 -0.588 -2.786 ML 40 38 3 43 6 1 1 59 78 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 41 38 3 43 6 1 1 59 78 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 42 38 3 43 6 0 0 57 76 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 43 43 5 43 6 1 1 60 80 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 44 44 6 44 5 1 1 60 79 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 10 ] 7 50 U A - - MP 45 44 6 49 6 2 2 59 78 -9.089 -9.028 -0.021 -7.805 -8.085 -8.480 -4.099 -3.922 -3.948 -0.223 -2.909 -4.520 1.417 -3.599 -3.953 0.044 -4.331 -1.824 3.283 -4.254 -0.588 -2.786 ML 46 44 6 49 6 1 1 57 76 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 47 44 6 49 6 1 1 57 76 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 48 44 6 49 6 0 0 55 74 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 49 49 5 49 6 1 1 58 78 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 50 50 6 50 5 1 1 58 77 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 11 ] 8 49 U A - - MP 51 50 6 55 6 2 2 57 76 -9.089 -9.028 -0.021 -7.805 -8.085 -8.480 -4.099 -3.922 -3.948 -0.223 -2.909 -4.520 1.417 -3.599 -3.953 0.044 -4.331 -1.824 3.283 -4.254 -0.588 -2.786 ML 52 50 6 55 6 1 1 55 74 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 53 50 6 55 6 1 1 55 74 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 54 50 6 55 6 0 0 53 72 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 55 55 5 55 6 1 1 56 76 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 56 56 6 56 5 1 1 56 75 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 12 ] 9 48 C G - - MP 57 56 6 61 6 2 2 55 74 -9.089 -9.028 -0.021 -7.805 -8.085 -8.480 -4.463 -4.361 -4.167 -0.601 -2.904 -4.590 3.523 -3.706 -4.213 -0.348 -4.484 -2.307 0.619 -4.537 -0.609 -3.056 ML 58 56 6 61 6 1 1 53 72 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 59 56 6 61 6 1 1 53 72 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 60 56 6 61 6 0 0 51 70 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 61 61 5 61 6 1 1 54 74 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 62 62 6 62 5 1 1 54 73 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 13 ] 10 47 U A - - MP 63 62 6 67 6 2 2 53 72 -9.089 -9.028 -0.021 -7.805 -8.085 -8.480 -4.099 -3.922 -3.948 -0.223 -2.909 -4.520 1.417 -3.599 -3.953 0.044 -4.331 -1.824 3.283 -4.254 -0.588 -2.786 ML 64 62 6 67 6 1 1 51 70 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 65 62 6 67 6 1 1 51 70 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 66 62 6 67 6 0 0 49 68 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 67 67 5 67 6 1 1 52 72 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 68 68 6 68 5 1 1 52 71 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 14 ] 11 46 A U - - MP 69 68 6 73 6 2 2 51 70 -9.089 -9.028 -0.021 -7.805 -8.085 -8.480 -3.720 -2.770 -3.744 3.283 -4.046 -5.102 0.249 -3.790 -3.638 1.156 -4.183 -0.258 -0.169 -4.302 -1.693 -2.582 ML 70 68 6 73 6 1 1 49 68 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 71 68 6 73 6 1 1 49 68 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 72 68 6 73 6 0 0 47 66 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 73 73 5 73 6 1 1 50 70 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 74 74 6 74 5 1 1 50 69 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 15 ] 12 45 G U - - MP 75 74 6 79 6 2 2 49 68 -9.089 -9.028 -0.021 -7.805 -8.085 -8.480 -3.561 -2.351 -3.723 1.167 -4.393 -5.118 -0.010 -3.754 -3.400 1.433 -3.918 3.023 -0.369 -4.338 -1.951 -2.435 ML 76 74 6 79 6 1 1 47 66 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 77 74 6 79 6 1 1 47 66 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 78 74 6 79 6 0 0 45 64 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 79 79 5 79 6 1 1 48 68 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 80 80 6 80 5 1 1 48 67 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 16 ] 13 44 a u - - MP 81 80 6 85 6 2 2 47 66 -9.089 -9.028 -0.021 -7.805 -8.085 -8.480 -2.893 0.853 -3.019 2.460 -3.315 -4.034 0.614 -3.269 -2.984 1.727 -3.508 0.035 0.366 -3.268 -1.164 -2.002 ML 82 80 6 85 6 1 1 45 64 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 83 80 6 85 6 1 1 45 64 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 84 80 6 85 6 0 0 43 62 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 85 85 5 85 6 1 1 46 66 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 86 86 6 86 5 1 1 46 65 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 17 ] 14 43 U A - - MP 87 86 6 91 6 2 2 45 64 -9.089 -9.028 -0.021 -7.805 -8.085 -8.480 -4.099 -3.922 -3.948 -0.223 -2.909 -4.520 1.417 -3.599 -3.953 0.044 -4.331 -1.824 3.283 -4.254 -0.588 -2.786 ML 88 86 6 91 6 1 1 43 62 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 89 86 6 91 6 1 1 43 62 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 90 86 6 91 6 0 0 41 60 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 91 91 5 91 6 1 1 44 64 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 92 92 6 92 5 1 1 44 63 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 18 ] 15 42 C G - - MP 93 92 6 97 6 2 2 43 62 -9.089 -9.028 -0.021 -7.805 -8.085 -8.480 -4.463 -4.361 -4.167 -0.601 -2.904 -4.590 3.523 -3.706 -4.213 -0.348 -4.484 -2.307 0.619 -4.537 -0.609 -3.056 ML 94 92 6 97 6 1 1 41 60 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 95 92 6 97 6 1 1 41 60 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 96 92 6 97 6 0 0 39 58 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 97 97 5 97 6 1 1 42 62 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 98 98 6 98 5 1 1 42 61 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 19 ] 16 41 u g - - MP 99 98 6 103 6 2 2 41 60 -9.089 -9.028 -0.021 -7.805 -8.085 -8.480 -4.001 -3.918 -3.724 -0.262 -2.510 -4.164 1.775 -3.274 -3.763 -0.053 -4.065 -1.922 0.939 -4.095 2.946 -2.639 ML 100 98 6 103 6 1 1 39 58 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 101 98 6 103 6 1 1 39 58 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 102 98 6 103 6 0 0 37 56 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 103 103 5 103 6 1 1 40 60 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 104 104 6 104 5 1 1 40 59 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 20 ] 17 40 C G - - MP 105 104 6 109 6 2 2 39 58 -9.089 -9.028 -0.021 -7.805 -8.085 -8.480 -4.463 -4.361 -4.167 -0.601 -2.904 -4.590 3.523 -3.706 -4.213 -0.348 -4.484 -2.307 0.619 -4.537 -0.609 -3.056 ML 106 104 6 109 6 1 1 37 56 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 107 104 6 109 6 1 1 37 56 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 108 104 6 109 6 0 0 35 54 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 109 109 5 109 6 1 1 38 58 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 110 110 6 110 5 1 1 38 57 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 21 ] 18 39 A U - - MP 111 110 6 115 6 2 2 37 56 -9.089 -9.028 -0.021 -7.805 -8.085 -8.480 -3.720 -2.770 -3.744 3.283 -4.046 -5.102 0.249 -3.790 -3.638 1.156 -4.183 -0.258 -0.169 -4.302 -1.693 -2.582 ML 112 110 6 115 6 1 1 35 54 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 113 110 6 115 6 1 1 35 54 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 114 110 6 115 6 0 0 33 52 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 115 115 5 115 6 1 1 36 56 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 116 116 6 116 5 1 1 36 55 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 22 ] 19 38 G C - - MP 117 116 6 121 6 2 2 35 54 -9.089 -9.028 -0.021 -7.805 -8.085 -8.480 -4.658 -3.054 -4.750 0.256 -5.115 -4.661 -0.500 -4.986 -4.273 3.617 -4.616 -0.750 -0.888 -4.413 -2.533 -3.628 ML 118 116 6 121 6 1 1 33 53 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 119 116 6 121 6 1 1 33 53 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 120 116 6 121 6 0 0 31 50 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 121 121 5 121 6 1 1 34 54 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 122 122 6 122 5 1 1 34 53 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 23 ] 20 37 C G - - MP 123 122 6 127 6 2 2 33 52 -9.089 -9.028 -0.021 -7.805 -8.085 -8.480 -4.463 -4.361 -4.167 -0.601 -2.904 -4.590 3.523 -3.706 -4.213 -0.348 -4.484 -2.307 0.619 -4.537 -0.609 -3.056 ML 124 122 6 127 6 1 1 32 51 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 125 122 6 127 6 1 1 32 51 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 126 122 6 127 6 0 0 30 49 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 127 127 5 127 6 1 1 32 52 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 128 128 6 128 5 1 1 32 51 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 24 ] 21 36 A U - - MP 129 128 6 133 4 2 2 31 50 -6.900 -7.107 -0.055 -5.521 -3.720 -2.770 -3.744 3.283 -4.046 -5.102 0.249 -3.790 -3.638 1.156 -4.183 -0.258 -0.169 -4.302 -1.693 -2.582 ML 130 128 6 133 4 1 1 31 51 -3.758 -3.940 -0.507 -2.670 0.368 -0.385 -0.191 0.094 MR 131 128 6 133 4 1 1 31 50 -4.809 -3.838 -1.706 -0.766 0.368 -0.385 -0.191 0.094 D 132 128 6 133 4 0 0 30 49 -4.568 -4.250 -2.265 -0.520 IL 133 133 5 133 4 1 1 33 52 -1.686 -2.369 -1.117 -4.855 0.000 0.000 0.000 0.000 IR 134 134 6 134 3 1 1 32 51 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 25 ] 22 - U - - - ML 135 134 6 137 3 1 1 28 47 -7.920 -0.021 -6.574 -1.403 -1.414 -2.133 1.594 D 136 134 6 137 3 0 0 27 46 -6.174 -1.687 -0.566 IL 137 137 3 137 3 1 1 30 50 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 26 ] 23 - u - - - ML 138 137 3 140 3 1 1 27 46 -7.920 -0.021 -6.574 0.204 -0.815 -1.116 0.862 D 139 137 3 140 3 0 0 26 45 -6.174 -1.687 -0.566 IL 140 140 3 140 3 1 1 29 49 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 27 ] 24 - U - - - ML 141 140 3 143 3 1 1 26 45 -7.920 -0.021 -6.574 -1.403 -1.414 -2.133 1.594 D 142 140 3 143 3 0 0 25 44 -6.174 -1.687 -0.566 IL 143 143 3 143 3 1 1 28 48 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 28 ] 25 - A - - - ML 144 143 3 146 3 1 1 25 44 -7.920 -0.021 -6.574 1.699 -2.281 -1.922 -1.815 D 145 143 3 146 3 0 0 24 43 -6.174 -1.687 -0.566 IL 146 146 3 146 3 1 1 27 46 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 29 ] 26 - A - - - ML 147 146 3 149 3 1 1 24 42 -7.920 -0.021 -6.574 1.699 -2.281 -1.922 -1.815 D 148 146 3 149 3 0 0 23 41 -6.174 -1.687 -0.566 IL 149 149 3 149 3 1 1 26 45 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 30 ] 27 - A - - - ML 150 149 3 152 3 1 1 22 41 -7.920 -0.021 -6.574 1.699 -2.281 -1.922 -1.815 D 151 149 3 152 3 0 0 21 40 -6.174 -1.687 -0.566 IL 152 152 3 152 3 1 1 25 44 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 31 ] 28 - U - - - ML 153 152 3 155 3 1 1 21 40 -7.920 -0.021 -6.574 -1.403 -1.414 -2.133 1.594 D 154 152 3 155 3 0 0 20 39 -6.174 -1.687 -0.566 IL 155 155 3 155 3 1 1 24 43 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 32 ] 29 - U - - - ML 156 155 3 158 3 1 1 20 39 -7.920 -0.021 -6.574 -1.403 -1.414 -2.133 1.594 D 157 155 3 158 3 0 0 19 38 -6.174 -1.687 -0.566 IL 158 158 3 158 3 1 1 23 42 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 33 ] 30 - G - - - ML 159 158 3 161 3 1 1 19 37 -7.920 -0.021 -6.574 -1.485 -2.690 1.701 -2.076 D 160 158 3 161 3 0 0 18 37 -6.174 -1.687 -0.566 IL 161 161 3 161 3 1 1 22 41 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 34 ] 31 - A - - - ML 162 161 3 164 3 1 1 18 36 -7.920 -0.021 -6.574 1.699 -2.281 -1.922 -1.815 D 163 161 3 164 3 0 0 17 36 -6.174 -1.687 -0.566 IL 164 164 3 164 3 1 1 21 40 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 35 ] 32 - U - - - ML 165 164 3 167 3 1 1 16 35 -7.920 -0.021 -6.574 -1.403 -1.414 -2.133 1.594 D 166 164 3 167 3 0 0 16 34 -6.174 -1.687 -0.566 IL 167 167 3 167 3 1 1 20 38 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 36 ] 33 - U - - - ML 168 167 3 170 3 1 1 15 33 -7.920 -0.021 -6.574 -1.403 -1.414 -2.133 1.594 D 169 167 3 170 3 0 0 15 33 -6.174 -1.687 -0.566 IL 170 170 3 170 3 1 1 19 37 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 37 ] 34 - G - - - ML 171 170 3 173 3 1 1 13 32 -7.920 -0.021 -6.574 -1.485 -2.690 1.701 -2.076 D 172 170 3 173 3 0 0 13 32 -6.174 -1.687 -0.566 IL 173 173 3 173 3 1 1 18 36 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 38 ] 35 - U - - - ML 174 173 3 176 2 1 1 1 1 * 0.000 -1.403 -1.414 -2.133 1.594 D 175 173 3 176 2 0 0 0 0 * 0.000 IL 176 176 3 176 2 1 1 13 28 -1.823 -0.479 0.000 0.000 0.000 0.000 [ END 39 ] - - - - - - E 177 176 3 -1 0 0 0 0 0 // HMMER3/f [3.4 | Aug 2023] NAME mir-3036 ACC RF03463 DESC mir-3036 microRNA precursor family LENG 58 MAXL 141 ALPH RNA RF no MM no CONS yes CS yes MAP yes DATE Sun Jul 7 06:09:14 2024 COM [1] /hps/software/users/agb/rfam/bin/cmbuild -F CM SEED COM [2] /hps/software/users/agb/rfam/bin/cmcalibrate --cpu 8 /nfs/production/agb/rfam/RELEASES/15.0/microrna/updates/RF03463/CM NSEQ 3 EFFN 2.586914 CKSUM 759394024 STATS LOCAL MSV -7.8781 0.71937 STATS LOCAL VITERBI -8.3881 0.71937 STATS LOCAL FORWARD -3.9338 0.71937 HMM A C G U m->m m->i m->d i->m i->i d->m d->d COMPO 1.30445 1.81344 1.45950 1.09891 1.38629 1.38629 1.38629 1.38629 0.04109 3.90571 3.90571 1.46634 0.26236 0.00000 * 1 0.29817 2.91091 1.93322 2.83508 1 A - - < 1.38629 1.38629 1.38629 1.38629 0.04109 3.90571 3.90571 1.46634 0.26236 1.09861 0.40547 2 3.09790 2.00190 2.86447 0.27081 2 U - - < 1.38629 1.38629 1.38629 1.38629 0.04109 3.90571 3.90571 1.46634 0.26236 1.09861 0.40547 3 3.09974 2.00202 2.86532 0.27061 3 U - - < 1.38629 1.38629 1.38629 1.38629 0.04109 3.90571 3.90571 1.46634 0.26236 1.09861 0.40547 4 2.65854 3.35523 0.15326 3.29300 4 G - - < 1.38629 1.38629 1.38629 1.38629 0.04109 3.90571 3.90571 1.46634 0.26236 1.09861 0.40547 5 2.81801 3.71149 0.12960 3.28647 5 G - - - 1.38629 1.38629 1.38629 1.38629 0.04109 3.90571 3.90571 1.46634 0.26236 1.09861 0.40547 6 3.10120 2.00212 2.86600 0.27046 6 U - - < 1.38629 1.38629 1.38629 1.38629 0.04109 3.90571 3.90571 1.46634 0.26236 1.09861 0.40547 7 3.10286 2.00223 2.86676 0.27028 7 U - - < 1.38629 1.38629 1.38629 1.38629 0.04109 3.90571 3.90571 1.46634 0.26236 1.09861 0.40547 8 3.10283 2.00223 2.86675 0.27029 8 U - - < 1.38629 1.38629 1.38629 1.38629 0.04109 3.90571 3.90571 1.46634 0.26236 1.09861 0.40547 9 3.31474 0.21326 3.10337 2.19989 9 C - - < 1.38629 1.38629 1.38629 1.38629 0.04109 3.90571 3.90571 1.46634 0.26236 1.09861 0.40547 10 3.10123 2.00212 2.86601 0.27045 10 U - - < 1.38629 1.38629 1.38629 1.38629 0.04109 3.90571 3.90571 1.46634 0.26236 1.09861 0.40547 11 0.29747 2.91404 1.93385 2.83949 11 A - - < 1.38629 1.38629 1.38629 1.38629 0.04109 3.90571 3.90571 1.46634 0.26236 1.09861 0.40547 12 1.97220 3.01518 0.28043 2.87614 12 G - - < 1.38629 1.38629 1.38629 1.38629 0.04109 3.90571 3.90571 1.46634 0.26236 1.09861 0.40547 13 0.53099 2.51217 1.45131 2.33695 13 A - - < 1.38629 1.38629 1.38629 1.38629 0.04109 3.90571 3.90571 1.46634 0.26236 1.09861 0.40547 14 3.09820 2.00192 2.86461 0.27077 14 U - - < 1.38629 1.38629 1.38629 1.38629 0.04109 3.90571 3.90571 1.46634 0.26236 1.09861 0.40547 15 3.30909 0.21381 3.10059 2.19887 15 C - - < 1.38629 1.38629 1.38629 1.38629 0.04109 3.90571 3.90571 1.46634 0.26236 1.09861 0.40547 16 3.03990 1.63370 2.84724 0.35818 16 U - - < 1.38629 1.38629 1.38629 1.38629 0.04109 3.90571 3.90571 1.46634 0.26236 1.09861 0.40547 17 3.30812 0.21391 3.10011 2.19870 17 C - - < 1.38629 1.38629 1.38629 1.38629 0.04109 3.90571 3.90571 1.46634 0.26236 1.09861 0.40547 18 0.29780 2.91253 1.93355 2.83736 18 A - - < 1.38629 1.38629 1.38629 1.38629 0.04109 3.90571 3.90571 1.46634 0.26236 1.09861 0.40547 19 2.65640 3.35257 0.15370 3.28933 19 G - - < 1.38629 1.38629 1.38629 1.38629 0.04109 3.90571 3.90571 1.46634 0.26236 1.09861 0.40547 20 3.30721 0.21400 3.09966 2.19854 20 C - - < 1.38629 1.38629 1.38629 1.38629 0.04109 3.90571 3.90571 1.46634 0.26236 1.09861 0.40547 21 0.29786 2.91229 1.93350 2.83702 21 A - - < 1.38629 1.38629 1.38629 1.38629 0.04109 3.90571 3.90571 1.46634 0.26236 1.09861 0.40547 22 2.71866 2.66425 3.24023 0.19209 22 U - - _ 1.38629 1.38629 1.38629 1.38629 0.04109 3.90571 3.90571 1.46634 0.26236 1.09861 0.40547 23 1.25020 2.05987 2.27792 0.72653 23 u - - _ 1.38629 1.38629 1.38629 1.38629 0.04109 3.90571 3.90571 1.46634 0.26236 1.09861 0.40547 24 2.71866 2.66425 3.24023 0.19209 24 U - - _ 1.38629 1.38629 1.38629 1.38629 0.04109 3.90571 3.90571 1.46634 0.26236 1.09861 0.40547 25 0.13680 3.35463 3.06752 3.07047 25 A - - _ 1.38629 1.38629 1.38629 1.38629 0.04109 3.90571 3.90571 1.46634 0.26236 1.09861 0.40547 26 0.13680 3.35463 3.06752 3.07047 26 A - - _ 1.38629 1.38629 1.38629 1.38629 0.04109 3.90571 3.90571 1.46634 0.26236 1.09861 0.40547 27 0.13680 3.35463 3.06752 3.07047 27 A - - _ 1.38629 1.38629 1.38629 1.38629 0.04109 3.90571 3.90571 1.46634 0.26236 1.09861 0.40547 28 2.71866 2.66425 3.24023 0.19209 28 U - - _ 1.38629 1.38629 1.38629 1.38629 0.04109 3.90571 3.90571 1.46634 0.26236 1.09861 0.40547 29 2.71866 2.66425 3.24023 0.19209 29 U - - _ 1.38629 1.38629 1.38629 1.38629 0.04109 3.90571 3.90571 1.46634 0.26236 1.09861 0.40547 30 2.81801 3.71149 0.12960 3.28647 30 G - - _ 1.38629 1.38629 1.38629 1.38629 0.04109 3.90571 3.90571 1.46634 0.26236 1.09861 0.40547 31 0.13680 3.35463 3.06752 3.07047 31 A - - _ 1.38629 1.38629 1.38629 1.38629 0.04109 3.90571 3.90571 1.46634 0.26236 1.09861 0.40547 32 2.71866 2.66425 3.24023 0.19209 32 U - - _ 1.38629 1.38629 1.38629 1.38629 0.04109 3.90571 3.90571 1.46634 0.26236 1.09861 0.40547 33 2.71866 2.66425 3.24023 0.19209 33 U - - _ 1.38629 1.38629 1.38629 1.38629 0.04109 3.90571 3.90571 1.46634 0.26236 1.09861 0.40547 34 2.81801 3.71149 0.12960 3.28647 34 G - - _ 1.38629 1.38629 1.38629 1.38629 0.04109 3.90571 3.90571 1.46634 0.26236 1.09861 0.40547 35 2.71866 2.66425 3.24023 0.19209 35 U - - _ 1.38629 1.38629 1.38629 1.38629 0.04109 3.90571 3.90571 1.46634 0.26236 1.09861 0.40547 36 3.05890 2.24064 2.72257 0.24723 36 U - - > 1.38629 1.38629 1.38629 1.38629 0.04109 3.90571 3.90571 1.46634 0.26236 1.09861 0.40547 37 2.47532 3.26619 0.18481 3.06929 37 G - - > 1.38629 1.38629 1.38629 1.38629 0.04109 3.90571 3.90571 1.46634 0.26236 1.09861 0.40547 38 3.48212 0.18259 3.18905 2.35453 38 C - - > 1.38629 1.38629 1.38629 1.38629 0.04109 3.90571 3.90571 1.46634 0.26236 1.09861 0.40547 39 3.05957 2.24073 2.72284 0.24715 39 U - - > 1.38629 1.38629 1.38629 1.38629 0.04109 3.90571 3.90571 1.46634 0.26236 1.09861 0.40547 40 2.47572 3.26676 0.18471 3.06996 40 G - - > 1.38629 1.38629 1.38629 1.38629 0.04109 3.90571 3.90571 1.46634 0.26236 1.09861 0.40547 41 2.18733 3.02591 0.25192 2.78126 41 G - - > 1.38629 1.38629 1.38629 1.38629 0.04109 3.90571 3.90571 1.46634 0.26236 1.09861 0.40547 42 2.47615 3.26737 0.18460 3.07069 42 G - - > 1.38629 1.38629 1.38629 1.38629 0.04109 3.90571 3.90571 1.46634 0.26236 1.09861 0.40547 43 0.30707 3.05053 1.83871 2.84659 43 A - - > 1.38629 1.38629 1.38629 1.38629 0.04109 3.90571 3.90571 1.46634 0.26236 1.09861 0.40547 44 2.55587 1.10988 2.31110 0.70598 44 u - - > 1.38629 1.38629 1.38629 1.38629 0.04109 3.90571 3.90571 1.46634 0.26236 1.09861 0.40547 45 3.08280 2.00382 2.81133 0.27546 45 U - - > 1.38629 1.38629 1.38629 1.38629 0.04109 3.90571 3.90571 1.46634 0.26236 1.09861 0.40547 46 3.06424 2.24136 2.72469 0.24663 46 U - - > 1.38629 1.38629 1.38629 1.38629 0.04109 3.90571 3.90571 1.46634 0.26236 1.09861 0.40547 47 0.30666 3.05274 1.83898 2.84920 47 A - - > 1.38629 1.38629 1.38629 1.38629 0.04109 3.90571 3.90571 1.46634 0.26236 1.09861 0.40547 48 2.47940 3.27198 0.18376 3.07613 48 G - - > 1.38629 1.38629 1.38629 1.38629 0.04109 3.90571 3.90571 1.46634 0.26236 1.09861 0.40547 49 0.30625 3.05495 1.83926 2.85181 49 A - - > 1.38629 1.38629 1.38629 1.38629 0.04109 3.90571 3.90571 1.46634 0.26236 1.09861 0.40547 50 0.30595 3.05663 1.83947 2.85380 50 A - - > 1.38629 1.38629 1.38629 1.38629 0.04109 3.90571 3.90571 1.46634 0.26236 1.09861 0.40547 51 0.30552 3.05896 1.83975 2.85656 51 A - - > 1.38629 1.38629 1.38629 1.38629 0.04109 3.90571 3.90571 1.46634 0.26236 1.09861 0.40547 52 1.76903 1.56210 0.77008 1.85259 52 g - - - 1.38629 1.38629 1.38629 1.38629 0.04109 3.90571 3.90571 1.46634 0.26236 1.09861 0.40547 53 3.49288 0.18172 3.19393 2.35657 53 C - - > 1.38629 1.38629 1.38629 1.38629 0.04109 3.90571 3.90571 1.46634 0.26236 1.09861 0.40547 54 0.30644 3.05394 1.83913 2.85061 54 A - - > 1.38629 1.38629 1.38629 1.38629 0.04109 3.90571 3.90571 1.46634 0.26236 1.09861 0.40547 55 0.30617 3.05539 1.83931 2.85233 55 A - - > 1.38629 1.38629 1.38629 1.38629 0.04109 3.90571 3.90571 1.46634 0.26236 1.09861 0.40547 56 3.07479 2.24278 2.72886 0.24546 56 U - - > 1.38629 1.38629 1.38629 1.38629 0.04109 3.90571 3.90571 1.46634 0.26236 1.09861 0.40547 57 0.13680 3.35463 3.06752 3.07047 57 A - - : 1.38629 1.38629 1.38629 1.38629 0.04109 3.90571 3.90571 1.46634 0.26236 1.09861 0.40547 58 2.71866 2.66425 3.24023 0.19209 58 U - - : 1.38629 1.38629 1.38629 1.38629 0.02075 3.88538 * 1.46634 0.26236 0.00000 * //