INFERNAL1/a [1.1.5 | Sep 2023] NAME mir-724 ACC RF03456 DESC mir-724 microRNA precursor family STATES 184 NODES 44 CLEN 60 W 77 ALPH RNA RF no CONS yes MAP yes DATE Mon Jul 8 00:33:29 2024 COM [1] /hps/software/users/agb/rfam/bin/cmbuild -F CM SEED COM [2] /hps/software/users/agb/rfam/bin/cmcalibrate --cpu 8 /nfs/production/agb/rfam/15/rescan/families/RF03456/CM PBEGIN 0.05 PEND 0.05 WBETA 1e-07 QDBBETA1 1e-07 QDBBETA2 1e-15 N2OMEGA 1.52588e-05 N3OMEGA 1.52588e-05 ELSELF -0.08926734 NSEQ 8 EFFN 1.839844 CKSUM 2772636658 NULL 0.000 0.000 0.000 0.000 GA 83.00 TC 83.10 NC 82.80 EFP7GF -9.0788 0.71929 ECMLC 0.64509 -4.61905 4.53190 1600000 439430 0.002731 ECMGC 0.42792 -14.77226 -1.27264 1600000 129085 0.003099 ECMLI 0.65802 -2.99113 5.51900 1600000 324457 0.003698 ECMGI 0.47687 -9.63344 1.67257 1600000 87811 0.004555 CM [ ROOT 0 ] - - - - - - S 0 -1 0 1 4 1 1 77 97 -6.830 -8.076 -0.083 -4.529 IL 1 1 2 1 4 1 11 78 98 -2.817 -4.319 -0.613 -2.698 0.000 0.000 0.000 0.000 IR 2 2 3 2 3 1 13 79 98 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 1 ] - 61 - A - - MR 3 2 3 5 3 1 14 77 97 -8.323 -0.019 -6.640 1.704 -2.302 -1.941 -1.838 D 4 2 3 5 3 0 7 75 95 -6.390 -1.568 -0.620 IR 5 5 3 5 3 1 12 78 97 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 2 ] - 60 - G - - MR 6 5 3 8 5 1 14 76 96 -7.063 -0.040 -6.879 -7.091 -7.983 -1.507 -2.715 1.706 -2.102 D 7 5 3 8 5 0 6 74 94 -5.352 -0.707 -2.978 -4.409 -2.404 IR 8 8 3 8 5 1 10 76 96 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 3 ] 1 59 U A - - MP 9 8 3 13 6 2 15 75 95 -9.093 -9.033 -0.021 -7.809 -8.089 -8.484 -4.121 -3.944 -3.967 -0.244 -2.924 -4.538 1.403 -3.615 -3.973 0.020 -4.349 -1.846 3.294 -4.275 -0.602 -2.804 ML 10 8 3 13 6 1 8 73 93 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 11 8 3 13 6 1 8 73 93 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 12 8 3 13 6 0 3 71 91 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 13 13 5 13 6 1 10 74 94 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 14 14 6 14 5 1 10 74 94 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 4 ] 2 58 U A - - MP 15 14 6 19 6 2 14 73 93 -9.093 -9.033 -0.021 -7.809 -8.089 -8.484 -4.121 -3.944 -3.967 -0.244 -2.924 -4.538 1.403 -3.615 -3.973 0.020 -4.349 -1.846 3.294 -4.275 -0.602 -2.804 ML 16 14 6 19 6 1 8 71 91 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 17 14 6 19 6 1 8 71 91 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 18 14 6 19 6 0 3 69 89 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 19 19 5 19 6 1 9 72 92 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 20 20 6 20 5 1 10 72 92 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 5 ] 3 57 A U - - MP 21 20 6 25 6 2 14 71 91 -9.093 -9.033 -0.021 -7.809 -8.089 -8.484 -3.737 -2.783 -3.760 3.296 -4.071 -5.128 0.225 -3.805 -3.654 1.137 -4.199 -0.268 -0.192 -4.325 -1.716 -2.597 ML 22 20 6 25 6 1 7 69 89 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 23 20 6 25 6 1 7 69 89 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 24 20 6 25 6 0 3 67 87 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 25 25 5 25 6 1 9 70 90 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 26 26 6 26 5 1 9 70 90 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 6 ] 4 56 A U - - MP 27 26 6 31 6 2 13 69 89 -9.093 -9.033 -0.021 -7.809 -8.089 -8.484 -3.737 -2.783 -3.760 3.296 -4.071 -5.128 0.225 -3.805 -3.654 1.137 -4.199 -0.268 -0.192 -4.325 -1.716 -2.597 ML 28 26 6 31 6 1 7 67 87 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 29 26 6 31 6 1 7 67 87 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 30 26 6 31 6 0 2 65 85 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 31 31 5 31 6 1 8 68 88 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 32 32 6 32 5 1 9 68 88 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 7 ] 5 55 A U - - MP 33 32 6 37 6 2 13 67 87 -9.093 -9.033 -0.021 -7.809 -8.089 -8.484 -3.737 -2.783 -3.760 3.296 -4.071 -5.128 0.225 -3.805 -3.654 1.137 -4.199 -0.268 -0.192 -4.325 -1.716 -2.597 ML 34 32 6 37 6 1 7 65 85 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 35 32 6 37 6 1 6 65 85 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 36 32 6 37 6 0 2 63 83 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 37 37 5 37 6 1 8 66 86 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 38 38 6 38 5 1 8 66 86 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 8 ] 6 54 G U - - MP 39 38 6 43 6 2 12 65 85 -9.093 -9.033 -0.021 -7.809 -8.089 -8.484 -3.574 -2.360 -3.737 1.160 -4.418 -5.142 -0.032 -3.766 -3.410 1.415 -3.929 3.037 -0.391 -4.360 -1.974 -2.446 ML 40 38 6 43 6 1 6 63 83 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 41 38 6 43 6 1 6 63 83 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 42 38 6 43 6 0 2 61 81 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 43 43 5 43 6 1 8 64 84 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 44 44 6 44 5 1 8 64 84 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 9 ] 7 53 G C - - MP 45 44 6 49 6 2 11 63 83 -9.093 -9.033 -0.021 -7.809 -8.089 -8.484 -4.678 -3.064 -4.772 0.242 -5.143 -4.669 -0.523 -5.010 -4.286 3.623 -4.628 -0.760 -0.910 -4.426 -2.557 -3.649 ML 46 44 6 49 6 1 6 61 81 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 47 44 6 49 6 1 5 61 81 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 48 44 6 49 6 0 2 59 79 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 49 49 5 49 6 1 7 62 82 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 50 50 6 50 5 1 7 62 82 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 10 ] 8 52 G C - - MP 51 50 6 55 6 2 10 61 81 -9.093 -9.033 -0.021 -7.809 -8.089 -8.484 -4.678 -3.064 -4.772 0.242 -5.143 -4.669 -0.523 -5.010 -4.286 3.623 -4.628 -0.760 -0.910 -4.426 -2.557 -3.649 ML 52 50 6 55 6 1 5 59 79 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 53 50 6 55 6 1 4 59 79 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 54 50 6 55 6 0 1 57 77 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 55 55 5 55 6 1 7 60 80 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 56 56 6 56 5 1 7 60 80 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 11 ] 9 51 A U - - MP 57 56 6 61 6 2 8 59 79 -9.093 -9.033 -0.021 -7.809 -8.089 -8.484 -3.737 -2.783 -3.760 3.296 -4.071 -5.128 0.225 -3.805 -3.654 1.137 -4.199 -0.268 -0.192 -4.325 -1.716 -2.597 ML 58 56 6 61 6 1 5 58 78 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 59 56 6 61 6 1 3 58 78 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 60 56 6 61 6 0 1 56 76 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 61 61 5 61 6 1 6 58 78 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 62 62 6 62 5 1 6 58 78 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 12 ] 10 50 A U - - MP 63 62 6 67 4 2 7 57 77 -6.911 -7.118 -0.055 -5.532 -3.737 -2.783 -3.760 3.296 -4.071 -5.128 0.225 -3.805 -3.654 1.137 -4.199 -0.268 -0.192 -4.325 -1.716 -2.597 ML 64 62 6 67 4 1 4 57 77 -3.758 -3.940 -0.507 -2.670 0.368 -0.385 -0.191 0.094 MR 65 62 6 67 4 1 2 56 77 -4.809 -3.838 -1.706 -0.766 0.368 -0.385 -0.191 0.094 D 66 62 6 67 4 0 1 55 76 -4.568 -4.250 -2.265 -0.520 IL 67 67 5 67 4 1 5 58 78 -1.686 -2.369 -1.117 -4.855 0.000 0.000 0.000 0.000 IR 68 68 6 68 3 1 5 57 77 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 13 ] 11 - U - - - ML 69 68 6 71 3 1 5 54 74 -7.930 -0.021 -6.584 -1.422 -1.430 -2.153 1.600 D 70 68 6 71 3 0 0 53 73 -6.174 -1.687 -0.566 IL 71 71 3 71 3 1 4 56 76 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 14 ] 12 - U - - - ML 72 71 3 74 3 1 4 53 73 -8.323 -0.019 -6.640 -1.422 -1.430 -2.153 1.600 D 73 71 3 74 3 0 0 52 72 -5.620 -0.734 -1.403 IL 74 74 3 74 3 1 3 54 74 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 15 ] - 49 - C - - MR 75 74 3 77 3 1 4 52 72 -8.323 -0.019 -6.640 -1.658 1.601 -2.479 -1.089 D 76 74 3 77 3 0 0 51 71 -6.390 -1.568 -0.620 IR 77 77 3 77 3 1 2 53 73 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 16 ] - 48 - C - - MR 78 77 3 80 5 1 3 51 71 -7.063 -0.040 -6.879 -7.091 -7.983 -1.658 1.601 -2.479 -1.089 D 79 77 3 80 5 0 0 50 70 -5.352 -0.707 -2.978 -4.409 -2.404 IR 80 80 3 80 5 1 2 52 71 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 17 ] 13 47 U A - - MP 81 80 3 85 6 2 4 50 70 -9.093 -9.033 -0.021 -7.809 -8.089 -8.484 -4.121 -3.944 -3.967 -0.244 -2.924 -4.538 1.403 -3.615 -3.973 0.020 -4.349 -1.846 3.294 -4.275 -0.602 -2.804 ML 82 80 3 85 6 1 1 50 69 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 83 80 3 85 6 1 1 49 69 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 84 80 3 85 6 0 0 48 67 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 85 85 5 85 6 1 1 50 70 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 86 86 6 86 5 1 1 50 69 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 18 ] 14 46 G C - - MP 87 86 6 91 4 2 2 48 68 -6.911 -7.118 -0.055 -5.532 -4.678 -3.064 -4.772 0.242 -5.143 -4.669 -0.523 -5.010 -4.286 3.623 -4.628 -0.760 -0.910 -4.426 -2.557 -3.649 ML 88 86 6 91 4 1 1 49 69 -3.758 -3.940 -0.507 -2.670 0.368 -0.385 -0.191 0.094 MR 89 86 6 91 4 1 1 48 68 -4.809 -3.838 -1.706 -0.766 0.368 -0.385 -0.191 0.094 D 90 86 6 91 4 0 0 47 67 -4.568 -4.250 -2.265 -0.520 IL 91 91 5 91 4 1 1 50 70 -1.686 -2.369 -1.117 -4.855 0.000 0.000 0.000 0.000 IR 92 92 6 92 3 1 1 49 69 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 19 ] 15 - C - - - ML 93 92 6 95 3 1 1 46 65 -8.323 -0.019 -6.640 -1.658 1.601 -2.479 -1.089 D 94 92 6 95 3 0 0 45 64 -5.620 -0.734 -1.403 IL 95 95 3 95 3 1 1 47 66 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 20 ] - 45 - A - - MR 96 95 3 98 5 1 1 45 64 -7.063 -0.040 -6.879 -7.091 -7.983 1.704 -2.302 -1.941 -1.838 D 97 95 3 98 5 0 0 44 64 -5.352 -0.707 -2.978 -4.409 -2.404 IR 98 98 3 98 5 1 1 45 65 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 21 ] 16 44 G C - - MP 99 98 3 103 4 2 2 44 63 -6.911 -7.118 -0.055 -5.532 -4.678 -3.064 -4.772 0.242 -5.143 -4.669 -0.523 -5.010 -4.286 3.623 -4.628 -0.760 -0.910 -4.426 -2.557 -3.649 ML 100 98 3 103 4 1 1 44 64 -3.758 -3.940 -0.507 -2.670 0.368 -0.385 -0.191 0.094 MR 101 98 3 103 4 1 1 44 64 -4.809 -3.838 -1.706 -0.766 0.368 -0.385 -0.191 0.094 D 102 98 3 103 4 0 0 43 63 -4.568 -4.250 -2.265 -0.520 IL 103 103 5 103 4 1 1 46 65 -1.686 -2.369 -1.117 -4.855 0.000 0.000 0.000 0.000 IR 104 104 6 104 3 1 1 45 64 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 22 ] 17 - A - - - ML 105 104 6 107 3 1 1 42 61 -8.323 -0.019 -6.640 1.704 -2.302 -1.941 -1.838 D 106 104 6 107 3 0 0 40 60 -5.620 -0.734 -1.403 IL 107 107 3 107 3 1 1 42 62 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 23 ] - 43 - C - - MR 108 107 3 110 5 1 1 41 60 -7.063 -0.040 -6.879 -7.091 -7.983 -1.658 1.601 -2.479 -1.089 D 109 107 3 110 5 0 0 39 58 -5.352 -0.707 -2.978 -4.409 -2.404 IR 110 110 3 110 5 1 1 41 60 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 24 ] 18 42 C G - - MP 111 110 3 115 6 2 2 40 59 -9.093 -9.033 -0.021 -7.809 -8.089 -8.484 -4.484 -4.384 -4.185 -0.622 -2.917 -4.605 3.530 -3.721 -4.232 -0.372 -4.500 -2.330 0.604 -4.557 -0.622 -3.074 ML 112 110 3 115 6 1 1 38 57 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 113 110 3 115 6 1 1 38 57 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 114 110 3 115 6 0 0 36 55 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 115 115 5 115 6 1 1 39 58 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 116 116 6 116 5 1 1 39 58 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 25 ] 19 41 U A - - MP 117 116 6 121 6 2 2 38 57 -9.093 -9.033 -0.021 -7.809 -8.089 -8.484 -4.121 -3.944 -3.967 -0.244 -2.924 -4.538 1.403 -3.615 -3.973 0.020 -4.349 -1.846 3.294 -4.275 -0.602 -2.804 ML 118 116 6 121 6 1 1 36 55 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 119 116 6 121 6 1 1 36 55 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 120 116 6 121 6 0 0 34 53 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 121 121 5 121 6 1 1 37 56 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 122 122 6 122 5 1 1 37 56 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 26 ] 20 40 G C - - MP 123 122 6 127 6 2 2 36 55 -9.093 -9.033 -0.021 -7.809 -8.089 -8.484 -4.678 -3.064 -4.772 0.242 -5.143 -4.669 -0.523 -5.010 -4.286 3.623 -4.628 -0.760 -0.910 -4.426 -2.557 -3.649 ML 124 122 6 127 6 1 1 34 53 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 125 122 6 127 6 1 1 34 53 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 126 122 6 127 6 0 0 32 51 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 127 127 5 127 6 1 1 35 54 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 128 128 6 128 5 1 1 35 54 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 27 ] 21 39 U A - - MP 129 128 6 133 6 2 2 34 53 -9.093 -9.033 -0.021 -7.809 -8.089 -8.484 -4.121 -3.944 -3.967 -0.244 -2.924 -4.538 1.403 -3.615 -3.973 0.020 -4.349 -1.846 3.294 -4.275 -0.602 -2.804 ML 130 128 6 133 6 1 1 32 51 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 131 128 6 133 6 1 1 32 51 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 132 128 6 133 6 0 0 30 49 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 133 133 5 133 6 1 1 33 53 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 134 134 6 134 5 1 1 33 52 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 28 ] 22 38 U A - - MP 135 134 6 139 4 2 2 32 51 -2.810 -7.118 -0.271 -5.532 -4.121 -3.944 -3.967 -0.244 -2.924 -4.538 1.403 -3.615 -3.973 0.020 -4.349 -1.846 3.294 -4.275 -0.602 -2.804 ML 136 134 6 139 4 1 1 31 50 -3.758 -3.940 -0.507 -2.670 0.368 -0.385 -0.191 0.094 MR 137 134 6 139 4 1 1 30 50 -4.809 -3.838 -1.706 -0.766 0.368 -0.385 -0.191 0.094 D 138 134 6 139 4 0 0 29 48 -4.568 -4.250 -2.265 -0.520 IL 139 139 5 139 4 1 1 31 51 -2.339 -3.022 -0.605 -5.508 0.000 0.000 0.000 0.000 IR 140 140 6 140 3 1 1 32 51 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 29 ] 24 - A - - - ML 141 140 6 143 3 1 1 28 47 -7.930 -0.021 -6.584 1.704 -2.302 -1.941 -1.838 D 142 140 6 143 3 0 0 27 46 -6.174 -1.687 -0.566 IL 143 143 3 143 3 1 1 30 50 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 30 ] 25 - G - - - ML 144 143 3 146 3 1 1 27 46 -7.930 -0.021 -6.584 -0.414 -1.922 1.371 -1.326 D 145 143 3 146 3 0 0 26 45 -6.174 -1.687 -0.566 IL 146 146 3 146 3 1 1 29 49 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 31 ] 26 - U - - - ML 147 146 3 149 3 1 1 26 45 -7.930 -0.021 -6.584 -1.422 -1.430 -2.153 1.600 D 148 146 3 149 3 0 0 25 44 -6.174 -1.687 -0.566 IL 149 149 3 149 3 1 1 28 48 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 32 ] 27 - C - - - ML 150 149 3 152 3 1 1 25 44 -7.930 -0.021 -6.584 -0.448 1.146 -1.595 -0.467 D 151 149 3 152 3 0 0 24 43 -6.174 -1.687 -0.566 IL 152 152 3 152 3 1 1 27 46 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 33 ] 28 - A - - - ML 153 152 3 155 3 1 1 24 42 -7.930 -0.021 -6.584 1.704 -2.302 -1.941 -1.838 D 154 152 3 155 3 0 0 22 41 -6.174 -1.687 -0.566 IL 155 155 3 155 3 1 1 26 45 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 34 ] 29 - a - - - ML 156 155 3 158 3 1 1 22 41 -7.930 -0.021 -6.584 0.624 -0.370 -0.208 -0.287 D 157 155 3 158 3 0 0 21 40 -6.174 -1.687 -0.566 IL 158 158 3 158 3 1 1 25 44 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 35 ] 30 - A - - - ML 159 158 3 161 3 1 1 21 40 -7.930 -0.021 -6.584 1.704 -2.302 -1.941 -1.838 D 160 158 3 161 3 0 0 20 39 -6.174 -1.687 -0.566 IL 161 161 3 161 3 1 1 24 43 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 36 ] 31 - u - - - ML 162 161 3 164 3 1 1 20 39 -7.930 -0.021 -6.584 -0.678 0.445 -1.452 0.721 D 163 161 3 164 3 0 0 19 38 -6.174 -1.687 -0.566 IL 164 164 3 164 3 1 1 23 42 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 37 ] 32 - u - - - ML 165 164 3 167 3 1 1 19 37 -7.930 -0.021 -6.584 -0.678 0.445 -1.452 0.721 D 166 164 3 167 3 0 0 18 37 -6.174 -1.687 -0.566 IL 167 167 3 167 3 1 1 22 41 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 38 ] 33 - a - - - ML 168 167 3 170 3 1 1 18 36 -7.930 -0.021 -6.584 0.583 -0.865 -0.201 0.116 D 169 167 3 170 3 0 0 17 36 -6.174 -1.687 -0.566 IL 170 170 3 170 3 1 1 21 40 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 39 ] 34 - u - - - ML 171 170 3 173 3 1 1 16 35 -7.930 -0.021 -6.584 -0.467 -0.866 -0.405 0.980 D 172 170 3 173 3 0 0 16 34 -6.174 -1.687 -0.566 IL 173 173 3 173 3 1 1 20 38 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 40 ] 35 - U - - - ML 174 173 3 176 3 1 1 15 33 -7.930 -0.021 -6.584 -1.422 -1.430 -2.153 1.600 D 175 173 3 176 3 0 0 15 33 -6.174 -1.687 -0.566 IL 176 176 3 176 3 1 1 19 37 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 41 ] 36 - A - - - ML 177 176 3 179 3 1 1 13 32 -7.930 -0.021 -6.584 1.704 -2.302 -1.941 -1.838 D 178 176 3 179 3 0 0 13 32 -6.174 -1.687 -0.566 IL 179 179 3 179 3 1 1 18 36 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 42 ] 37 - G - - - ML 180 179 3 182 2 1 1 1 1 * 0.000 -0.414 -1.922 1.371 -1.326 D 181 179 3 182 2 0 0 0 0 * 0.000 IL 182 182 3 182 2 1 1 13 28 -1.823 -0.479 0.000 0.000 0.000 0.000 [ END 43 ] - - - - - - E 183 182 3 -1 0 0 0 0 0 // HMMER3/f [3.4 | Aug 2023] NAME mir-724 ACC RF03456 DESC mir-724 microRNA precursor family LENG 60 MAXL 143 ALPH RNA RF no MM no CONS yes CS yes MAP yes DATE Mon Jul 8 00:33:29 2024 COM [1] /hps/software/users/agb/rfam/bin/cmbuild -F CM SEED COM [2] /hps/software/users/agb/rfam/bin/cmcalibrate --cpu 8 /nfs/production/agb/rfam/15/rescan/families/RF03456/CM NSEQ 8 EFFN 2.542969 CKSUM 2772636658 STATS LOCAL MSV -8.1218 0.71929 STATS LOCAL VITERBI -8.6330 0.71929 STATS LOCAL FORWARD -3.7729 0.71929 HMM A C G U m->m m->i m->d i->m i->i d->m d->d COMPO 1.23173 1.51095 1.56679 1.27726 1.38629 1.38629 1.38629 1.38629 0.04049 3.91996 3.91996 1.46634 0.26236 0.00000 * 1 3.06907 1.98371 2.83602 0.27797 1 U - - < 1.38629 1.38629 1.38629 1.38629 0.04049 3.91996 3.91996 1.46634 0.26236 1.09861 0.40547 2 3.07427 1.98405 2.83841 0.27741 2 U - - < 1.38629 1.38629 1.38629 1.38629 0.04049 3.91996 3.91996 1.46634 0.26236 1.09861 0.40547 3 0.30489 2.88859 1.91570 2.81502 3 A - - < 1.38629 1.38629 1.38629 1.38629 0.04049 3.91996 3.91996 1.46634 0.26236 1.09861 0.40547 4 0.30486 2.88874 1.91573 2.81523 4 A - - < 1.38629 1.38629 1.38629 1.38629 0.04049 3.91996 3.91996 1.46634 0.26236 1.09861 0.40547 5 0.30488 2.88863 1.91571 2.81507 5 A - - < 1.38629 1.38629 1.38629 1.38629 0.04049 3.91996 3.91996 1.46634 0.26236 1.09861 0.40547 6 1.96268 2.99485 0.28494 2.85748 6 G - - < 1.38629 1.38629 1.38629 1.38629 0.04049 3.91996 3.91996 1.46634 0.26236 1.09861 0.40547 7 2.64473 3.33409 0.15620 3.27166 7 G - - < 1.38629 1.38629 1.38629 1.38629 0.04049 3.91996 3.91996 1.46634 0.26236 1.09861 0.40547 8 2.64443 3.33372 0.15627 3.27114 8 G - - < 1.38629 1.38629 1.38629 1.38629 0.04049 3.91996 3.91996 1.46634 0.26236 1.09861 0.40547 9 0.30507 2.88780 1.91554 2.81391 9 A - - < 1.38629 1.38629 1.38629 1.38629 0.04049 3.91996 3.91996 1.46634 0.26236 1.09861 0.40547 10 0.30511 2.88765 1.91551 2.81368 10 A - - < 1.38629 1.38629 1.38629 1.38629 0.04049 3.91996 3.91996 1.46634 0.26236 1.09861 0.40547 11 2.69962 2.64841 3.22050 0.19593 11 U - - - 1.38629 1.38629 1.38629 1.38629 0.04049 3.91996 3.91996 1.46634 0.26236 1.09861 0.40547 12 2.69962 2.64841 3.22050 0.19593 12 U - - - 1.38629 1.38629 1.38629 1.38629 0.04049 3.91996 3.91996 1.46634 0.26236 1.09861 0.40547 13 3.07692 1.98422 2.83962 0.27712 13 U - - < 1.38629 1.38629 1.38629 1.38629 0.04049 3.91996 3.91996 1.46634 0.26236 1.09861 0.40547 14 2.64691 3.33678 0.15575 3.27537 14 G - - < 1.38629 1.38629 1.38629 1.38629 0.04049 3.91996 3.91996 1.46634 0.26236 1.09861 0.40547 15 2.96184 0.17955 3.53806 2.48219 15 C - - - 1.38629 1.38629 1.38629 1.38629 0.04049 3.91996 3.91996 1.46634 0.26236 1.09861 0.40547 16 2.64667 3.33649 0.15580 3.27497 16 G - - < 1.38629 1.38629 1.38629 1.38629 0.04049 3.91996 3.91996 1.46634 0.26236 1.09861 0.40547 17 0.13979 3.33453 3.04935 3.04827 17 A - - - 1.38629 1.38629 1.38629 1.38629 0.04049 3.91996 3.91996 1.46634 0.26236 1.09861 0.40547 18 3.29463 0.21770 3.08048 2.18378 18 C - - < 1.38629 1.38629 1.38629 1.38629 0.04049 3.91996 3.91996 1.46634 0.26236 1.09861 0.40547 19 3.08014 1.98444 2.84110 0.27677 19 U - - < 1.38629 1.38629 1.38629 1.38629 0.04049 3.91996 3.91996 1.46634 0.26236 1.09861 0.40547 20 2.64746 3.33746 0.15563 3.27632 20 G - - < 1.38629 1.38629 1.38629 1.38629 0.04049 3.91996 3.91996 1.46634 0.26236 1.09861 0.40547 21 3.07895 1.98436 2.84055 0.27690 21 U - - < 1.38629 1.38629 1.38629 1.38629 0.04049 3.91996 3.91996 1.46634 0.26236 1.09861 0.40547 22 3.07797 1.98429 2.84010 0.27701 22 U - - < 1.38629 1.38629 1.38629 1.38629 0.19940 1.82675 3.91996 0.23061 1.58010 1.09861 0.40547 23 0.13979 3.33453 3.04935 3.04827 24 A - - _ 1.38629 1.38629 1.38629 1.38629 0.04049 3.91996 3.91996 1.46634 0.26236 1.09861 0.40547 24 1.78885 2.96280 0.35067 2.56449 25 G - - _ 1.38629 1.38629 1.38629 1.38629 0.04049 3.91996 3.91996 1.46634 0.26236 1.09861 0.40547 25 2.69962 2.64841 3.22050 0.19593 26 U - - _ 1.38629 1.38629 1.38629 1.38629 0.04049 3.91996 3.91996 1.46634 0.26236 1.09861 0.40547 26 1.82820 0.47652 2.72927 1.87672 27 C - - _ 1.38629 1.38629 1.38629 1.38629 0.04049 3.91996 3.91996 1.46634 0.26236 1.09861 0.40547 27 0.13979 3.33453 3.04935 3.04827 28 A - - _ 1.38629 1.38629 1.38629 1.38629 0.04049 3.91996 3.91996 1.46634 0.26236 1.09861 0.40547 28 0.92558 1.63640 1.51955 1.65963 29 a - - _ 1.38629 1.38629 1.38629 1.38629 0.04049 3.91996 3.91996 1.46634 0.26236 1.09861 0.40547 29 0.13979 3.33453 3.04935 3.04827 30 A - - _ 1.38629 1.38629 1.38629 1.38629 0.04049 3.91996 3.91996 1.46634 0.26236 1.09861 0.40547 30 2.00134 1.01326 2.55551 0.85765 31 u - - _ 1.38629 1.38629 1.38629 1.38629 0.04049 3.91996 3.91996 1.46634 0.26236 1.09861 0.40547 31 2.00134 1.01326 2.55551 0.85765 32 u - - _ 1.38629 1.38629 1.38629 1.38629 0.04049 3.91996 3.91996 1.46634 0.26236 1.09861 0.40547 32 0.95873 2.05386 1.51698 1.31302 33 a - - _ 1.38629 1.38629 1.38629 1.38629 0.04049 3.91996 3.91996 1.46634 0.26236 1.09861 0.40547 33 1.82835 2.10121 1.68056 0.63347 34 U - - _ 1.38629 1.38629 1.38629 1.38629 0.04049 3.91996 3.91996 1.46634 0.26236 1.09861 0.40547 34 2.69962 2.64841 3.22050 0.19593 35 U - - _ 1.38629 1.38629 1.38629 1.38629 0.04049 3.91996 3.91996 1.46634 0.26236 1.09861 0.40547 35 0.13979 3.33453 3.04935 3.04827 36 A - - _ 1.38629 1.38629 1.38629 1.38629 0.04049 3.91996 3.91996 1.46634 0.26236 1.09861 0.40547 36 1.78885 2.96280 0.35067 2.56449 37 G - - _ 1.38629 1.38629 1.38629 1.38629 0.04049 3.91996 3.91996 1.46634 0.26236 1.09861 0.40547 37 0.31412 3.02644 1.82117 2.82608 38 A - - > 1.38629 1.38629 1.38629 1.38629 0.04049 3.91996 3.91996 1.46634 0.26236 1.09861 0.40547 38 0.31394 3.02739 1.82129 2.82721 39 A - - > 1.38629 1.38629 1.38629 1.38629 0.04049 3.91996 3.91996 1.46634 0.26236 1.09861 0.40547 39 3.48095 0.18433 3.17649 2.34523 40 C - - > 1.38629 1.38629 1.38629 1.38629 0.04049 3.91996 3.91996 1.46634 0.26236 1.09861 0.40547 40 0.31339 3.03029 1.82163 2.83065 41 A - - > 1.38629 1.38629 1.38629 1.38629 0.04049 3.91996 3.91996 1.46634 0.26236 1.09861 0.40547 41 2.46801 3.25586 0.18636 3.06346 42 G - - > 1.38629 1.38629 1.38629 1.38629 0.04049 3.91996 3.91996 1.46634 0.26236 1.09861 0.40547 42 2.96184 0.17955 3.53806 2.48219 43 C - - - 1.38629 1.38629 1.38629 1.38629 0.04049 3.91996 3.91996 1.46634 0.26236 1.09861 0.40547 43 3.49326 0.18333 3.18199 2.34754 44 C - - > 1.38629 1.38629 1.38629 1.38629 0.04049 3.91996 3.91996 1.46634 0.26236 1.09861 0.40547 44 0.13979 3.33453 3.04935 3.04827 45 A - - - 1.38629 1.38629 1.38629 1.38629 0.04049 3.91996 3.91996 1.46634 0.26236 1.09861 0.40547 45 3.48524 0.18398 3.17841 2.34604 46 C - - > 1.38629 1.38629 1.38629 1.38629 0.04049 3.91996 3.91996 1.46634 0.26236 1.09861 0.40547 46 0.31304 3.03218 1.82186 2.83290 47 A - - > 1.38629 1.38629 1.38629 1.38629 0.04049 3.91996 3.91996 1.46634 0.26236 1.09861 0.40547 47 2.96184 0.17955 3.53806 2.48219 48 C - - - 1.38629 1.38629 1.38629 1.38629 0.04049 3.91996 3.91996 1.46634 0.26236 1.09861 0.40547 48 2.96184 0.17955 3.53806 2.48219 49 C - - - 1.38629 1.38629 1.38629 1.38629 0.04049 3.91996 3.91996 1.46634 0.26236 1.09861 0.40547 49 3.03669 2.22039 2.69824 0.25345 50 U - - > 1.38629 1.38629 1.38629 1.38629 0.04049 3.91996 3.91996 1.46634 0.26236 1.09861 0.40547 50 3.03718 2.22046 2.69843 0.25340 51 U - - > 1.38629 1.38629 1.38629 1.38629 0.04049 3.91996 3.91996 1.46634 0.26236 1.09861 0.40547 51 3.46677 0.18549 3.17011 2.34255 52 C - - > 1.38629 1.38629 1.38629 1.38629 0.04049 3.91996 3.91996 1.46634 0.26236 1.09861 0.40547 52 3.46798 0.18539 3.17065 2.34278 53 C - - > 1.38629 1.38629 1.38629 1.38629 0.04049 3.91996 3.91996 1.46634 0.26236 1.09861 0.40547 53 3.06493 1.98718 2.79161 0.28112 54 U - - > 1.38629 1.38629 1.38629 1.38629 0.04049 3.91996 3.91996 1.46634 0.26236 1.09861 0.40547 54 3.04063 2.22092 2.69978 0.25300 55 U - - > 1.38629 1.38629 1.38629 1.38629 0.04049 3.91996 3.91996 1.46634 0.26236 1.09861 0.40547 55 3.04214 2.22112 2.70038 0.25283 56 U - - > 1.38629 1.38629 1.38629 1.38629 0.04049 3.91996 3.91996 1.46634 0.26236 1.09861 0.40547 56 3.04413 2.22138 2.70116 0.25260 57 U - - > 1.38629 1.38629 1.38629 1.38629 0.04049 3.91996 3.91996 1.46634 0.26236 1.09861 0.40547 57 0.31367 3.02882 1.82146 2.82891 58 A - - > 1.38629 1.38629 1.38629 1.38629 0.04049 3.91996 3.91996 1.46634 0.26236 1.09861 0.40547 58 0.31330 3.03076 1.82169 2.83121 59 A - - > 1.38629 1.38629 1.38629 1.38629 0.04049 3.91996 3.91996 1.46634 0.26236 1.09861 0.40547 59 2.79765 3.68851 0.13263 3.26364 60 G - - : 1.38629 1.38629 1.38629 1.38629 0.04049 3.91996 3.91996 1.46634 0.26236 1.09861 0.40547 60 0.13979 3.33453 3.04935 3.04827 61 A - - : 1.38629 1.38629 1.38629 1.38629 0.02045 3.89992 * 1.46634 0.26236 0.00000 * //