INFERNAL1/a [1.1.5 | Sep 2023] NAME mir-7552 ACC RF03445 DESC mir-7552 microRNA precursor family STATES 193 NODES 45 CLEN 63 W 78 ALPH RNA RF no CONS yes MAP yes DATE Tue Jul 9 07:03:18 2024 COM [1] /hps/software/users/agb/rfam/bin/cmbuild -F CM SEED COM [2] /hps/software/users/agb/rfam/bin/cmcalibrate --cpu 8 /nfs/production/agb/rfam/15/rescan/families/RF03445/CM PBEGIN 0.05 PEND 0.05 WBETA 1e-07 QDBBETA1 1e-07 QDBBETA2 1e-15 N2OMEGA 1.52588e-05 N3OMEGA 1.52588e-05 ELSELF -0.08926734 NSEQ 4 EFFN 2.113281 CKSUM 3894748945 NULL 0.000 0.000 0.000 0.000 GA 59.00 TC 59.20 NC 57.20 EFP7GF -8.8419 0.71919 ECMLC 0.55193 -6.16187 4.21663 1600000 368886 0.003253 ECMGC 0.43642 -13.49450 -0.22268 1600000 131077 0.003052 ECMLI 0.53247 -4.86571 5.30294 1600000 269568 0.004452 ECMGI 0.46407 -9.08878 2.68556 1600000 94423 0.004236 CM [ ROOT 0 ] - - - - - - S 0 -1 0 1 4 1 1 78 98 -7.021 -7.228 -0.050 -5.642 IL 1 1 2 1 4 1 12 83 102 -1.686 -2.369 -1.117 -4.855 0.000 0.000 0.000 0.000 IR 2 2 3 2 3 1 12 82 101 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 1 ] 1 - U - - - ML 3 2 3 5 3 1 12 79 98 -8.033 -0.020 -6.687 -0.833 -0.053 -1.590 1.099 D 4 2 3 5 3 0 6 77 97 -6.174 -1.687 -0.566 IL 5 5 3 5 3 1 11 81 100 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 2 ] 2 - U - - - ML 6 5 3 8 3 1 11 77 97 -8.419 -0.018 -6.736 -1.613 -1.587 -2.353 1.653 D 7 5 3 8 3 0 6 76 96 -5.620 -0.734 -1.403 IL 8 8 3 8 3 1 9 78 98 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 3 ] - 64 - u - - MR 9 8 3 11 3 1 10 76 96 -8.419 -0.018 -6.736 -0.760 0.430 -1.542 0.782 D 10 8 3 11 3 0 4 75 94 -6.390 -1.568 -0.620 IR 11 11 3 11 3 1 9 77 97 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 4 ] - 63 - G - - MR 12 11 3 14 3 1 9 75 95 -8.419 -0.018 -6.736 -1.726 -2.969 1.755 -2.356 D 13 11 3 14 3 0 3 74 93 -6.390 -1.568 -0.620 IR 14 14 3 14 3 1 8 76 96 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 5 ] - 62 - G - - MR 15 14 3 17 3 1 9 74 94 -8.419 -0.018 -6.736 -1.726 -2.969 1.755 -2.356 D 16 14 3 17 3 0 3 73 92 -6.390 -1.568 -0.620 IR 17 17 3 17 3 1 7 75 95 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 6 ] - 61 - U - - MR 18 17 3 20 3 1 8 73 93 -8.419 -0.018 -6.736 -1.613 -1.587 -2.353 1.653 D 19 17 3 20 3 0 2 72 91 -6.390 -1.568 -0.620 IR 20 20 3 20 3 1 6 74 94 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 7 ] - 60 - U - - MR 21 20 3 23 5 1 8 72 92 -7.153 -0.037 -6.969 -7.181 -8.072 -1.613 -1.587 -2.353 1.653 D 22 20 3 23 5 0 1 71 91 -5.352 -0.707 -2.978 -4.409 -2.404 IR 23 23 3 23 5 1 5 73 92 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 8 ] 3 59 A U - - MP 24 23 3 28 6 2 9 71 91 -9.136 -9.075 -0.021 -7.852 -8.132 -8.527 -3.917 -2.917 -3.926 3.407 -4.327 -5.402 -0.019 -3.960 -3.813 0.943 -4.367 -0.373 -0.436 -4.569 -1.959 -2.753 ML 25 23 3 28 6 1 3 70 89 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 26 23 3 28 6 1 3 70 89 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 27 23 3 28 6 0 0 67 87 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 28 28 5 28 6 1 4 71 91 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 29 29 6 29 5 1 5 71 90 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 9 ] 4 58 C G - - MP 30 29 6 34 6 2 9 69 89 -9.136 -9.075 -0.021 -7.852 -8.132 -8.527 -4.702 -4.621 -4.366 -0.840 -3.051 -4.758 3.595 -3.876 -4.421 -0.620 -4.665 -2.570 0.448 -4.761 -0.761 -3.255 ML 31 29 6 34 6 1 3 68 87 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 32 29 6 34 6 1 3 68 87 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 33 29 6 34 6 0 0 65 85 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 34 34 5 34 6 1 4 69 89 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 35 35 6 35 5 1 4 69 88 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 10 ] 5 57 A U - - MP 36 35 6 40 6 2 8 67 87 -9.136 -9.075 -0.021 -7.852 -8.132 -8.527 -3.917 -2.917 -3.926 3.407 -4.327 -5.402 -0.019 -3.960 -3.813 0.943 -4.367 -0.373 -0.436 -4.569 -1.959 -2.753 ML 37 35 6 40 6 1 3 66 85 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 38 35 6 40 6 1 3 66 85 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 39 35 6 40 6 0 0 63 83 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 40 40 5 40 6 1 4 67 87 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 41 41 6 41 5 1 4 67 86 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 11 ] 6 56 A U - - MP 42 41 6 46 6 2 8 65 85 -9.136 -9.075 -0.021 -7.852 -8.132 -8.527 -3.917 -2.917 -3.926 3.407 -4.327 -5.402 -0.019 -3.960 -3.813 0.943 -4.367 -0.373 -0.436 -4.569 -1.959 -2.753 ML 43 41 6 46 6 1 2 64 83 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 44 41 6 46 6 1 2 64 83 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 45 41 6 46 6 0 0 61 81 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 46 46 5 46 6 1 3 65 85 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 47 47 6 47 5 1 4 65 84 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 12 ] 7 55 U A - - MP 48 47 6 52 6 2 7 63 83 -9.136 -9.075 -0.021 -7.852 -8.132 -8.527 -4.353 -4.182 -4.173 -0.466 -3.081 -4.722 1.251 -3.788 -4.176 -0.235 -4.542 -2.076 3.400 -4.498 -0.753 -2.984 ML 49 47 6 52 6 1 2 62 81 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 50 47 6 52 6 1 2 62 81 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 51 47 6 52 6 0 0 60 79 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 52 52 5 52 6 1 3 63 83 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 53 53 6 53 5 1 3 63 82 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 13 ] 8 54 U A - - MP 54 53 6 58 6 2 6 61 81 -9.136 -9.075 -0.021 -7.852 -8.132 -8.527 -4.353 -4.182 -4.173 -0.466 -3.081 -4.722 1.251 -3.788 -4.176 -0.235 -4.542 -2.076 3.400 -4.498 -0.753 -2.984 ML 55 53 6 58 6 1 2 60 80 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 56 53 6 58 6 1 2 60 79 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 57 53 6 58 6 0 0 58 77 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 58 58 5 58 6 1 3 61 81 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 59 59 6 59 5 1 3 61 80 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 14 ] 9 53 A U - - MP 60 59 6 64 6 2 5 59 79 -9.136 -9.075 -0.021 -7.852 -8.132 -8.527 -3.917 -2.917 -3.926 3.407 -4.327 -5.402 -0.019 -3.960 -3.813 0.943 -4.367 -0.373 -0.436 -4.569 -1.959 -2.753 ML 61 59 6 64 6 1 2 59 78 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 62 59 6 64 6 1 2 58 78 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 63 59 6 64 6 0 0 57 76 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 64 64 5 64 6 1 2 59 79 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 65 65 6 65 5 1 2 59 78 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 15 ] 10 52 a u - - MP 66 65 6 70 4 2 3 57 77 -7.021 -7.228 -0.050 -5.642 -2.792 -2.450 0.352 2.721 -2.985 -3.864 0.785 -3.143 -2.944 1.305 -3.484 -0.370 0.507 -3.129 -0.941 -1.986 ML 67 65 6 70 4 1 1 58 77 -3.758 -3.940 -0.507 -2.670 0.368 -0.385 -0.191 0.094 MR 68 65 6 70 4 1 1 57 77 -4.809 -3.838 -1.706 -0.766 0.368 -0.385 -0.191 0.094 D 69 65 6 70 4 0 0 56 76 -4.568 -4.250 -2.265 -0.520 IL 70 70 5 70 4 1 2 59 79 -1.686 -2.369 -1.117 -4.855 0.000 0.000 0.000 0.000 IR 71 71 6 71 3 1 2 58 78 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 16 ] 11 - A - - - ML 72 71 6 74 3 1 2 55 74 -8.419 -0.018 -6.736 1.747 -2.510 -2.128 -2.066 D 73 71 6 74 3 0 0 54 73 -5.620 -0.734 -1.403 IL 74 74 3 74 3 1 1 56 75 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 17 ] - 51 - c - - MR 75 74 3 77 5 1 2 54 73 -7.153 -0.037 -6.969 -7.181 -8.072 -0.889 0.958 -1.703 0.275 D 76 74 3 77 5 0 0 53 72 -5.352 -0.707 -2.978 -4.409 -2.404 IR 77 77 3 77 5 1 1 54 74 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 18 ] 12 50 G C - - MP 78 77 3 82 6 2 3 53 72 -9.136 -9.075 -0.021 -7.852 -8.132 -8.527 -4.018 -2.710 -4.046 0.772 -4.725 -4.555 -0.155 -4.406 -3.935 3.284 -4.330 0.984 -0.438 -3.994 -2.136 -2.942 ML 79 77 3 82 6 1 1 51 71 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 80 77 3 82 6 1 1 51 71 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 81 77 3 82 6 0 0 49 68 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 82 82 5 82 6 1 1 53 72 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 83 83 6 83 5 1 1 52 72 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 19 ] 13 49 G C - - MP 84 83 6 88 6 2 3 51 70 -9.136 -9.075 -0.021 -7.852 -8.132 -8.527 -4.880 -3.160 -4.993 0.108 -5.426 -4.747 -0.757 -5.244 -4.417 3.670 -4.744 -0.864 -1.138 -4.558 -2.801 -3.867 ML 85 83 6 88 6 1 1 49 69 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 86 83 6 88 6 1 1 49 69 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 87 83 6 88 6 0 0 47 66 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 88 88 5 88 6 1 1 51 70 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 89 89 6 89 5 1 1 50 70 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 20 ] 14 48 A U - - MP 90 89 6 94 6 2 2 49 68 -9.136 -9.075 -0.021 -7.852 -8.132 -8.527 -3.917 -2.917 -3.926 3.407 -4.327 -5.402 -0.019 -3.960 -3.813 0.943 -4.367 -0.373 -0.436 -4.569 -1.959 -2.753 ML 91 89 6 94 6 1 1 47 67 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 92 89 6 94 6 1 1 47 67 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 93 89 6 94 6 0 0 45 64 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 94 94 5 94 6 1 1 49 68 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 95 95 6 95 5 1 1 48 68 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 21 ] 15 47 u a - - MP 96 95 6 100 6 2 2 47 66 -9.136 -9.075 -0.021 -7.852 -8.132 -8.527 -2.573 -2.631 -2.679 0.692 -2.239 -3.455 1.738 -2.749 -2.716 0.842 -3.232 -0.926 1.816 -2.845 1.438 0.221 ML 97 95 6 100 6 1 1 45 65 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 98 95 6 100 6 1 1 45 65 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 99 95 6 100 6 0 0 43 62 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 100 100 5 100 6 1 1 47 66 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 101 101 6 101 5 1 1 46 66 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 22 ] 16 46 A U - - MP 102 101 6 106 6 2 2 45 64 -9.136 -9.075 -0.021 -7.852 -8.132 -8.527 -3.917 -2.917 -3.926 3.407 -4.327 -5.402 -0.019 -3.960 -3.813 0.943 -4.367 -0.373 -0.436 -4.569 -1.959 -2.753 ML 103 101 6 106 6 1 1 43 63 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 104 101 6 106 6 1 1 43 63 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 105 101 6 106 6 0 0 41 60 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 106 106 5 106 6 1 1 45 64 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 107 107 6 107 5 1 1 44 64 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 23 ] 17 45 U A - - MP 108 107 6 112 6 2 2 43 62 -9.136 -9.075 -0.021 -7.852 -8.132 -8.527 -4.353 -4.182 -4.173 -0.466 -3.081 -4.722 1.251 -3.788 -4.176 -0.235 -4.542 -2.076 3.400 -4.498 -0.753 -2.984 ML 109 107 6 112 6 1 1 41 61 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 110 107 6 112 6 1 1 41 61 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 111 107 6 112 6 0 0 39 58 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 112 112 5 112 6 1 1 43 62 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 113 113 6 113 5 1 1 42 62 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 24 ] 18 44 U A - - MP 114 113 6 118 6 2 2 41 60 -9.136 -9.075 -0.021 -7.852 -8.132 -8.527 -4.353 -4.182 -4.173 -0.466 -3.081 -4.722 1.251 -3.788 -4.176 -0.235 -4.542 -2.076 3.400 -4.498 -0.753 -2.984 ML 115 113 6 118 6 1 1 40 59 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 116 113 6 118 6 1 1 39 59 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 117 113 6 118 6 0 0 37 56 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 118 118 5 118 6 1 1 41 60 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 119 119 6 119 5 1 1 40 60 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 25 ] 19 43 U A - - MP 120 119 6 124 6 2 2 39 58 -9.136 -9.075 -0.021 -7.852 -8.132 -8.527 -4.353 -4.182 -4.173 -0.466 -3.081 -4.722 1.251 -3.788 -4.176 -0.235 -4.542 -2.076 3.400 -4.498 -0.753 -2.984 ML 121 119 6 124 6 1 1 38 57 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 122 119 6 124 6 1 1 38 57 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 123 119 6 124 6 0 0 35 55 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 124 124 5 124 6 1 1 39 58 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 125 125 6 125 5 1 1 38 58 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 26 ] 20 42 C G - - MP 126 125 6 130 6 2 2 37 56 -9.136 -9.075 -0.021 -7.852 -8.132 -8.527 -4.702 -4.621 -4.366 -0.840 -3.051 -4.758 3.595 -3.876 -4.421 -0.620 -4.665 -2.570 0.448 -4.761 -0.761 -3.255 ML 127 125 6 130 6 1 1 36 56 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 128 125 6 130 6 1 1 36 55 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 129 125 6 130 6 0 0 34 54 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 130 130 5 130 6 1 1 37 56 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 131 131 6 131 5 1 1 36 56 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 27 ] 21 41 u g - - MP 132 131 6 136 4 2 2 35 54 -7.021 -7.228 -0.050 -5.642 -3.754 -3.751 -3.595 -0.117 -2.519 -4.116 1.761 -3.249 -3.632 0.092 -3.993 -1.844 1.852 -3.885 2.532 -2.531 ML 133 131 6 136 4 1 1 36 55 -3.758 -3.940 -0.507 -2.670 0.368 -0.385 -0.191 0.094 MR 134 131 6 136 4 1 1 35 54 -4.809 -3.838 -1.706 -0.766 0.368 -0.385 -0.191 0.094 D 135 131 6 136 4 0 0 34 53 -4.568 -4.250 -2.265 -0.520 IL 136 136 5 136 4 1 1 37 56 -1.686 -2.369 -1.117 -4.855 0.000 0.000 0.000 0.000 IR 137 137 6 137 3 1 1 36 55 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 28 ] 22 - U - - - ML 138 137 6 140 3 1 1 32 51 -8.033 -0.020 -6.687 -1.613 -1.587 -2.353 1.653 D 139 137 6 140 3 0 0 31 50 -6.174 -1.687 -0.566 IL 140 140 3 140 3 1 1 35 54 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 29 ] 23 - G - - - ML 141 140 3 143 3 1 1 31 50 -8.419 -0.018 -6.736 -1.726 -2.969 1.755 -2.356 D 142 140 3 143 3 0 0 30 49 -5.620 -0.734 -1.403 IL 143 143 3 143 3 1 1 32 51 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 30 ] - 40 - C - - MR 144 143 3 146 3 1 1 30 49 -3.016 -0.463 -2.730 -1.908 1.666 -2.737 -1.288 D 145 143 3 146 3 0 0 28 47 -6.390 -1.568 -0.620 IR 146 146 3 146 3 1 1 30 49 -2.423 -0.370 -4.662 0.000 0.000 0.000 0.000 [ MATR 31 ] - 38 - A - - MR 147 146 3 149 3 1 1 29 48 -8.199 -0.021 -6.517 1.636 -2.037 -1.703 -1.548 D 148 146 3 149 3 0 0 28 47 -7.548 -0.508 -1.778 IR 149 149 3 149 3 1 1 30 49 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 32 ] - 37 - G - - MR 150 149 3 152 3 1 1 28 47 -8.419 -0.018 -6.736 0.181 -1.656 1.050 -1.065 D 151 149 3 152 3 0 0 27 45 -6.390 -1.568 -0.620 IR 152 152 3 152 3 1 1 29 48 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 33 ] - 36 - A - - MR 153 152 3 155 5 1 1 27 46 -7.153 -0.037 -6.969 -7.181 -8.072 1.012 -1.054 -1.146 0.070 D 154 152 3 155 5 0 0 26 45 -5.352 -0.707 -2.978 -4.409 -2.404 IR 155 155 3 155 5 1 1 27 46 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 34 ] 24 35 c g - - MP 156 155 3 160 6 2 2 26 45 -9.136 -9.075 -0.021 -7.852 -8.132 -8.527 -3.838 -3.770 -3.680 0.003 -2.556 -4.221 2.974 -3.287 -3.691 0.244 -4.062 -1.733 1.955 -3.959 -0.223 -2.547 ML 157 155 3 160 6 1 1 26 45 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 158 155 3 160 6 1 1 25 44 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 159 155 3 160 6 0 0 24 43 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 160 160 5 160 6 1 1 26 45 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 161 161 6 161 5 1 1 26 44 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 35 ] 25 34 g c - - MP 162 161 6 166 4 2 2 24 43 -7.021 -7.228 -0.050 -5.642 -2.726 -1.969 -2.942 1.105 -3.148 -3.596 0.730 -3.166 0.178 2.221 -3.222 1.676 0.462 -3.032 -1.029 -1.939 ML 163 161 6 166 4 1 1 25 44 -3.758 -3.940 -0.507 -2.670 0.368 -0.385 -0.191 0.094 MR 164 161 6 166 4 1 1 24 43 -4.809 -3.838 -1.706 -0.766 0.368 -0.385 -0.191 0.094 D 165 161 6 166 4 0 0 23 42 -4.568 -4.250 -2.265 -0.520 IL 166 166 5 166 4 1 1 26 45 -1.686 -2.369 -1.117 -4.855 0.000 0.000 0.000 0.000 IR 167 167 6 167 3 1 1 25 44 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 36 ] 26 - A - - - ML 168 167 6 170 3 1 1 21 40 -8.033 -0.020 -6.687 1.196 -1.525 -0.227 -0.982 D 169 167 6 170 3 0 0 20 39 -6.174 -1.687 -0.566 IL 170 170 3 170 3 1 1 24 43 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 37 ] 27 - c - - - ML 171 170 3 173 3 1 1 20 39 -8.033 -0.020 -6.687 0.056 0.408 -1.159 0.246 D 172 170 3 173 3 0 0 19 38 -6.174 -1.687 -0.566 IL 173 173 3 173 3 1 1 23 42 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 38 ] 28 - U - - - ML 174 173 3 176 3 1 1 19 37 -8.033 -0.020 -6.687 -1.613 -1.587 -2.353 1.653 D 175 173 3 176 3 0 0 18 37 -6.174 -1.687 -0.566 IL 176 176 3 176 3 1 1 22 41 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 39 ] 29 - G - - - ML 177 176 3 179 3 1 1 17 36 -8.033 -0.020 -6.687 -1.726 -2.969 1.755 -2.356 D 178 176 3 179 3 0 0 17 36 -6.174 -1.687 -0.566 IL 179 179 3 179 3 1 1 21 40 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 40 ] 30 - A - - - ML 180 179 3 182 3 1 1 16 35 -8.033 -0.020 -6.687 1.747 -2.510 -2.128 -2.066 D 181 179 3 182 3 0 0 16 34 -6.174 -1.687 -0.566 IL 182 182 3 182 3 1 1 20 38 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 41 ] 31 - A - - - ML 183 182 3 185 3 1 1 15 33 -8.033 -0.020 -6.687 1.122 -1.489 -0.082 -0.935 D 184 182 3 185 3 0 0 15 33 -6.174 -1.687 -0.566 IL 185 185 3 185 3 1 1 19 37 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 42 ] 32 - U - - - ML 186 185 3 188 3 1 1 13 31 -8.033 -0.020 -6.687 -0.833 -0.053 -1.590 1.099 D 187 185 3 188 3 0 0 13 32 -6.174 -1.687 -0.566 IL 188 188 3 188 3 1 1 18 36 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 43 ] 33 - A - - - ML 189 188 3 191 2 1 1 1 1 * 0.000 1.201 -1.527 -0.237 -0.985 D 190 188 3 191 2 0 0 0 0 * 0.000 IL 191 191 3 191 2 1 1 13 28 -1.823 -0.479 0.000 0.000 0.000 0.000 [ END 44 ] - - - - - - E 192 191 3 -1 0 0 0 0 0 // HMMER3/f [3.4 | Aug 2023] NAME mir-7552 ACC RF03445 DESC mir-7552 microRNA precursor family LENG 63 MAXL 146 ALPH RNA RF no MM no CONS yes CS yes MAP yes DATE Tue Jul 9 07:03:18 2024 COM [1] /hps/software/users/agb/rfam/bin/cmbuild -F CM SEED COM [2] /hps/software/users/agb/rfam/bin/cmcalibrate --cpu 8 /nfs/production/agb/rfam/15/rescan/families/RF03445/CM NSEQ 4 EFFN 3.019531 CKSUM 3894748945 STATS LOCAL MSV -8.2853 0.71919 STATS LOCAL VITERBI -8.7875 0.71919 STATS LOCAL FORWARD -3.4446 0.71919 HMM A C G U m->m m->i m->d i->m i->i d->m d->d COMPO 1.26670 1.77956 1.48193 1.13218 1.38629 1.38629 1.38629 1.38629 0.03803 3.98158 3.98158 1.46634 0.26236 0.00000 * 1 2.16169 1.41159 2.69896 0.55540 1 U - - : 1.38629 1.38629 1.38629 1.38629 0.03803 3.98158 3.98158 1.46634 0.26236 1.09861 0.40547 2 2.89690 2.81298 3.42430 0.15992 2 U - - : 1.38629 1.38629 1.38629 1.38629 0.03803 3.98158 3.98158 1.46634 0.26236 1.09861 0.40547 3 0.23671 3.15413 2.10675 3.06890 3 A - - < 1.38629 1.38629 1.38629 1.38629 0.03803 3.98158 3.98158 1.46634 0.26236 1.09861 0.40547 4 3.51312 0.17513 3.32279 2.35601 4 C - - < 1.38629 1.38629 1.38629 1.38629 0.03803 3.98158 3.98158 1.46634 0.26236 1.09861 0.40547 5 0.23668 3.15433 2.10680 3.06917 5 A - - < 1.38629 1.38629 1.38629 1.38629 0.03803 3.98158 3.98158 1.46634 0.26236 1.09861 0.40547 6 0.23676 3.15383 2.10668 3.06849 6 A - - < 1.38629 1.38629 1.38629 1.38629 0.03803 3.98158 3.98158 1.46634 0.26236 1.09861 0.40547 7 3.32869 2.17791 3.11675 0.21495 7 U - - < 1.38629 1.38629 1.38629 1.38629 0.03803 3.98158 3.98158 1.46634 0.26236 1.09861 0.40547 8 3.32749 2.17781 3.11616 0.21505 8 U - - < 1.38629 1.38629 1.38629 1.38629 0.03803 3.98158 3.98158 1.46634 0.26236 1.09861 0.40547 9 0.23702 3.15229 2.10633 3.06640 9 A - - < 1.38629 1.38629 1.38629 1.38629 0.03803 3.98158 3.98158 1.46634 0.26236 1.09861 0.40547 10 0.48782 2.35563 1.69894 2.22259 10 A - - < 1.38629 1.38629 1.38629 1.38629 0.03803 3.98158 3.98158 1.46634 0.26236 1.09861 0.40547 11 0.11208 3.54119 3.23672 3.27654 11 A - - - 1.38629 1.38629 1.38629 1.38629 0.03803 3.98158 3.98158 1.46634 0.26236 1.09861 0.40547 12 2.23301 3.01412 0.23943 2.87129 12 G - - < 1.38629 1.38629 1.38629 1.38629 0.03803 3.98158 3.98158 1.46634 0.26236 1.09861 0.40547 13 2.78269 3.54243 0.12965 3.48067 13 G - - < 1.38629 1.38629 1.38629 1.38629 0.03803 3.98158 3.98158 1.46634 0.26236 1.09861 0.40547 14 0.23668 3.15432 2.10679 3.06915 14 A - - < 1.38629 1.38629 1.38629 1.38629 0.03803 3.98158 3.98158 1.46634 0.26236 1.09861 0.40547 15 2.18777 1.54027 2.02055 0.61447 15 U - - < 1.38629 1.38629 1.38629 1.38629 0.03803 3.98158 3.98158 1.46634 0.26236 1.09861 0.40547 16 0.23686 3.15328 2.10655 3.06773 16 A - - < 1.38629 1.38629 1.38629 1.38629 0.03803 3.98158 3.98158 1.46634 0.26236 1.09861 0.40547 17 3.32748 2.17781 3.11615 0.21505 17 U - - < 1.38629 1.38629 1.38629 1.38629 0.03803 3.98158 3.98158 1.46634 0.26236 1.09861 0.40547 18 3.32641 2.17772 3.11563 0.21514 18 U - - < 1.38629 1.38629 1.38629 1.38629 0.03803 3.98158 3.98158 1.46634 0.26236 1.09861 0.40547 19 3.32550 2.17764 3.11518 0.21522 19 U - - < 1.38629 1.38629 1.38629 1.38629 0.03803 3.98158 3.98158 1.46634 0.26236 1.09861 0.40547 20 3.50464 0.17580 3.31840 2.35444 20 C - - < 1.38629 1.38629 1.38629 1.38629 0.03803 3.98158 3.98158 1.46634 0.26236 1.09861 0.40547 21 2.93933 1.63848 2.74043 0.37356 21 U - - < 1.38629 1.38629 1.38629 1.38629 0.03803 3.98158 3.98158 1.46634 0.26236 1.09861 0.40547 22 2.89690 2.81298 3.42430 0.15992 22 U - - - 1.38629 1.38629 1.38629 1.38629 0.03803 3.98158 3.98158 1.46634 0.26236 1.09861 0.40547 23 3.00389 3.91974 0.10523 3.49199 23 G - - - 1.38629 1.38629 1.38629 1.38629 0.03803 3.98158 3.98158 1.46634 0.26236 1.09861 0.40547 24 2.74730 0.60497 2.51554 1.17445 24 C - - < 1.38629 1.38629 1.38629 1.38629 0.03803 3.98158 3.98158 1.46634 0.26236 1.09861 0.40547 25 1.90163 2.39413 0.42381 2.25496 25 G - - < 1.38629 1.38629 1.38629 1.38629 0.03803 3.98158 3.98158 1.46634 0.26236 1.09861 0.40547 26 0.48796 2.65754 1.53394 2.29941 26 A - - _ 1.38629 1.38629 1.38629 1.38629 0.03803 3.98158 3.98158 1.46634 0.26236 1.09861 0.40547 27 1.37118 1.03058 2.30900 1.23776 27 c - - _ 1.38629 1.38629 1.38629 1.38629 0.03803 3.98158 3.98158 1.46634 0.26236 1.09861 0.40547 28 2.89690 2.81298 3.42430 0.15992 28 U - - _ 1.38629 1.38629 1.38629 1.38629 0.03803 3.98158 3.98158 1.46634 0.26236 1.09861 0.40547 29 3.00389 3.91974 0.10523 3.49199 29 G - - _ 1.38629 1.38629 1.38629 1.38629 0.03803 3.98158 3.98158 1.46634 0.26236 1.09861 0.40547 30 0.11208 3.54119 3.23672 3.27654 30 A - - _ 1.38629 1.38629 1.38629 1.38629 0.03803 3.98158 3.98158 1.46634 0.26236 1.09861 0.40547 31 0.54181 2.62870 1.41949 2.26053 31 A - - _ 1.38629 1.38629 1.38629 1.38629 0.03803 3.98158 3.98158 1.46634 0.26236 1.09861 0.40547 32 2.16169 1.41159 2.69896 0.55540 32 U - - _ 1.38629 1.38629 1.38629 1.38629 0.03803 3.98158 3.98158 1.46634 0.26236 1.09861 0.40547 33 0.48451 2.65974 1.54174 2.30232 33 A - - _ 1.38629 1.38629 1.38629 1.38629 0.03803 3.98158 3.98158 1.46634 0.26236 1.09861 0.40547 34 1.74581 1.14869 2.20271 0.92145 34 u - - > 1.38629 1.38629 1.38629 1.38629 0.03803 3.98158 3.98158 1.46634 0.26236 1.09861 0.40547 35 1.31583 2.68874 0.53898 2.52030 35 G - - > 1.38629 1.38629 1.38629 1.38629 0.03803 3.98158 3.98158 1.46634 0.26236 1.09861 0.40547 36 0.62089 2.24293 2.31637 1.35573 36 A - - - 1.38629 1.38629 1.38629 1.38629 0.03803 3.98158 3.98158 1.46634 0.26236 1.09861 0.40547 37 1.28279 2.75800 0.57044 2.36401 37 G - - - 1.38629 1.38629 1.38629 1.38629 0.22885 3.98158 1.68258 1.46634 0.26236 1.09861 0.40547 38 0.17050 3.15136 2.88412 2.84624 38 A - - - 1.38629 1.38629 1.38629 1.38629 0.24378 1.64023 3.79857 0.21690 1.63479 0.18292 1.78877 39 3.21086 0.14075 3.78236 2.68527 40 C - - - 1.38629 1.38629 1.38629 1.38629 0.03803 3.98158 3.98158 1.46634 0.26236 1.09861 0.40547 40 1.39551 2.90084 0.46153 2.70304 41 G - - > 1.38629 1.38629 1.38629 1.38629 0.03803 3.98158 3.98158 1.46634 0.26236 1.09861 0.40547 41 2.63310 3.48441 0.15147 3.26940 42 G - - > 1.38629 1.38629 1.38629 1.38629 0.03803 3.98158 3.98158 1.46634 0.26236 1.09861 0.40547 42 0.24404 3.30440 2.01401 3.07111 43 A - - > 1.38629 1.38629 1.38629 1.38629 0.03803 3.98158 3.98158 1.46634 0.26236 1.09861 0.40547 43 0.24395 3.30505 2.01411 3.07185 44 A - - > 1.38629 1.38629 1.38629 1.38629 0.03803 3.98158 3.98158 1.46634 0.26236 1.09861 0.40547 44 0.24383 3.30587 2.01424 3.07277 45 A - - > 1.38629 1.38629 1.38629 1.38629 0.03803 3.98158 3.98158 1.46634 0.26236 1.09861 0.40547 45 3.29000 2.43605 2.96216 0.19415 46 U - - > 1.38629 1.38629 1.38629 1.38629 0.03803 3.98158 3.98158 1.46634 0.26236 1.09861 0.40547 46 1.34846 2.18779 0.88173 1.54117 47 g - - > 1.38629 1.38629 1.38629 1.38629 0.03803 3.98158 3.98158 1.46634 0.26236 1.09861 0.40547 47 3.29574 2.43694 2.96458 0.19365 48 U - - > 1.38629 1.38629 1.38629 1.38629 0.03803 3.98158 3.98158 1.46634 0.26236 1.09861 0.40547 48 3.68104 0.15410 3.38978 2.47813 49 C - - > 1.38629 1.38629 1.38629 1.38629 0.03803 3.98158 3.98158 1.46634 0.26236 1.09861 0.40547 49 3.11228 0.41749 2.83478 1.43519 50 C - - > 1.38629 1.38629 1.38629 1.38629 0.03803 3.98158 3.98158 1.46634 0.26236 1.09861 0.40547 50 2.21700 0.62305 2.80860 1.22258 51 C - - - 1.38629 1.38629 1.38629 1.38629 0.03803 3.98158 3.98158 1.46634 0.26236 1.09861 0.40547 51 2.44739 1.93355 1.48404 0.61226 52 U - - > 1.38629 1.38629 1.38629 1.38629 0.03803 3.98158 3.98158 1.46634 0.26236 1.09861 0.40547 52 3.28662 2.43553 2.96073 0.19445 53 U - - > 1.38629 1.38629 1.38629 1.38629 0.03803 3.98158 3.98158 1.46634 0.26236 1.09861 0.40547 53 0.24383 3.30588 2.01424 3.07278 54 A - - > 1.38629 1.38629 1.38629 1.38629 0.03803 3.98158 3.98158 1.46634 0.26236 1.09861 0.40547 54 0.24369 3.30693 2.01439 3.07396 55 A - - > 1.38629 1.38629 1.38629 1.38629 0.03803 3.98158 3.98158 1.46634 0.26236 1.09861 0.40547 55 3.29247 2.43644 2.96320 0.19393 56 U - - > 1.38629 1.38629 1.38629 1.38629 0.03803 3.98158 3.98158 1.46634 0.26236 1.09861 0.40547 56 3.29576 2.43695 2.96459 0.19364 57 U - - > 1.38629 1.38629 1.38629 1.38629 0.03803 3.98158 3.98158 1.46634 0.26236 1.09861 0.40547 57 2.64031 3.49526 0.14994 3.28185 58 G - - > 1.38629 1.38629 1.38629 1.38629 0.03803 3.98158 3.98158 1.46634 0.26236 1.09861 0.40547 58 3.30672 2.43863 2.96919 0.19269 59 U - - > 1.38629 1.38629 1.38629 1.38629 0.03803 3.98158 3.98158 1.46634 0.26236 1.09861 0.40547 59 2.89690 2.81298 3.42430 0.15992 60 U - - : 1.38629 1.38629 1.38629 1.38629 0.03803 3.98158 3.98158 1.46634 0.26236 1.09861 0.40547 60 2.89690 2.81298 3.42430 0.15992 61 U - - : 1.38629 1.38629 1.38629 1.38629 0.03803 3.98158 3.98158 1.46634 0.26236 1.09861 0.40547 61 3.00389 3.91974 0.10523 3.49199 62 G - - : 1.38629 1.38629 1.38629 1.38629 0.03803 3.98158 3.98158 1.46634 0.26236 1.09861 0.40547 62 3.00389 3.91974 0.10523 3.49199 63 G - - : 1.38629 1.38629 1.38629 1.38629 0.03803 3.98158 3.98158 1.46634 0.26236 1.09861 0.40547 63 2.09364 1.01981 2.65501 0.80788 64 u - - : 1.38629 1.38629 1.38629 1.38629 0.01919 3.96275 * 1.46634 0.26236 0.00000 * //