INFERNAL1/a [1.1.5 | Sep 2023] NAME mir-9418 ACC RF03388 DESC mir-9418 microRNA precursor family STATES 187 NODES 49 CLEN 61 W 77 ALPH RNA RF no CONS yes MAP yes DATE Wed Jul 10 00:06:50 2024 COM [1] /hps/software/users/agb/rfam/bin/cmbuild -F CM SEED COM [2] /hps/software/users/agb/rfam/bin/cmcalibrate --cpu 8 /nfs/production/agb/rfam/15/rescan/families/RF03388/CM PBEGIN 0.05 PEND 0.05 WBETA 1e-07 QDBBETA1 1e-07 QDBBETA2 1e-15 N2OMEGA 1.52588e-05 N3OMEGA 1.52588e-05 ELSELF -0.08926734 NSEQ 2 EFFN 2.000000 CKSUM 2979411565 NULL 0.000 0.000 0.000 0.000 GA 82.00 TC 82.20 NC 42.70 EFP7GF -5.7099 0.72990 ECMLC 0.54658 -8.23881 3.06644 1600000 579124 0.002072 ECMGC 0.49042 -13.13225 -0.89826 1600000 161329 0.002479 ECMLI 0.55536 -5.28693 4.56443 1600000 285243 0.004207 ECMGI 0.49657 -9.40677 1.84070 1600000 106575 0.003753 CM [ ROOT 0 ] - - - - - - S 0 -1 0 1 4 1 1 77 96 -6.977 -7.184 -0.052 -5.598 IL 1 1 2 1 4 1 13 81 101 -1.686 -2.369 -1.117 -4.855 0.000 0.000 0.000 0.000 IR 2 2 3 2 3 1 12 80 100 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 1 ] 1 - U - - - ML 3 2 3 5 3 1 12 77 96 -7.991 -0.020 -6.645 -1.535 -1.523 -2.271 1.632 D 4 2 3 5 3 0 6 75 95 -6.174 -1.687 -0.566 IL 5 5 3 5 3 1 12 79 99 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 2 ] 2 - C - - - ML 6 5 3 8 3 1 12 76 95 -7.991 -0.020 -6.645 -1.806 1.641 -2.632 -1.207 D 7 5 3 8 3 0 5 74 94 -6.174 -1.687 -0.566 IL 8 8 3 8 3 1 11 78 97 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 3 ] 3 - A - - - ML 9 8 3 11 3 1 11 74 94 -7.991 -0.020 -6.645 1.730 -2.426 -2.052 -1.973 D 10 8 3 11 3 0 5 73 93 -6.174 -1.687 -0.566 IL 11 11 3 11 3 1 10 77 96 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 4 ] 4 - U - - - ML 12 11 3 14 3 1 10 73 93 -7.991 -0.020 -6.645 -1.535 -1.523 -2.271 1.632 D 13 11 3 14 3 0 4 72 92 -6.174 -1.687 -0.566 IL 14 14 3 14 3 1 9 75 95 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 5 ] 5 - u - - - ML 15 14 3 17 3 1 9 72 92 -7.991 -0.020 -6.645 0.557 -0.859 -1.066 0.585 D 16 14 3 17 3 0 3 71 91 -6.174 -1.687 -0.566 IL 17 17 3 17 3 1 8 74 94 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 6 ] 6 - C - - - ML 18 17 3 20 3 1 9 71 91 -7.991 -0.020 -6.645 -1.806 1.641 -2.632 -1.207 D 19 17 3 20 3 0 2 70 90 -6.174 -1.687 -0.566 IL 20 20 3 20 3 1 7 73 93 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 7 ] 7 - A - - - ML 21 20 3 23 3 1 8 70 90 -7.991 -0.020 -6.645 1.730 -2.426 -2.052 -1.973 D 22 20 3 23 3 0 2 69 89 -6.174 -1.687 -0.566 IL 23 23 3 23 3 1 7 72 92 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 8 ] 8 - A - - - ML 24 23 3 26 3 1 7 69 89 -7.991 -0.020 -6.645 1.730 -2.426 -2.052 -1.973 D 25 23 3 26 3 0 1 68 87 -6.174 -1.687 -0.566 IL 26 26 3 26 3 1 6 71 91 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 9 ] 9 - G - - - ML 27 26 3 29 3 1 6 68 88 -7.991 -0.020 -6.645 -1.638 -2.867 1.736 -2.254 D 28 26 3 29 3 0 1 67 86 -6.174 -1.687 -0.566 IL 29 29 3 29 3 1 5 70 90 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 10 ] 10 - U - - - ML 30 29 3 32 3 1 6 67 86 -7.991 -0.020 -6.645 -1.535 -1.523 -2.271 1.632 D 31 29 3 32 3 0 0 66 85 -6.174 -1.687 -0.566 IL 32 32 3 32 3 1 4 69 89 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 11 ] 11 - G - - - ML 33 32 3 35 3 1 5 66 85 -7.991 -0.020 -6.645 -1.638 -2.867 1.736 -2.254 D 34 32 3 35 3 0 0 65 84 -6.174 -1.687 -0.566 IL 35 35 3 35 3 1 4 68 88 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 12 ] 12 - C - - - ML 36 35 3 38 3 1 4 65 84 -7.991 -0.020 -6.645 -1.806 1.641 -2.632 -1.207 D 37 35 3 38 3 0 0 64 83 -6.174 -1.687 -0.566 IL 38 38 3 38 3 1 3 67 87 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 13 ] 13 - A - - - ML 39 38 3 41 3 1 4 64 83 -8.380 -0.018 -6.697 1.730 -2.426 -2.052 -1.973 D 40 38 3 41 3 0 0 63 82 -5.620 -0.734 -1.403 IL 41 41 3 41 3 1 2 65 84 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 14 ] - 61 - a - - MR 42 41 3 44 3 1 3 63 82 -8.380 -0.018 -6.697 0.713 -1.419 0.512 -0.832 D 43 41 3 44 3 0 0 61 80 -6.390 -1.568 -0.620 IR 44 44 3 44 3 1 2 64 83 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 15 ] - 60 - U - - MR 45 44 3 47 3 1 3 62 81 -8.380 -0.018 -6.697 -1.535 -1.523 -2.271 1.632 D 46 44 3 47 3 0 0 60 79 -6.390 -1.568 -0.620 IR 47 47 3 47 3 1 1 63 82 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 16 ] - 59 - u - - MR 48 47 3 50 3 1 2 61 80 -8.380 -0.018 -6.697 0.557 -0.859 -1.066 0.585 D 49 47 3 50 3 0 0 59 78 -6.390 -1.568 -0.620 IR 50 50 3 50 3 1 1 62 81 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 17 ] - 58 - u - - MR 51 50 3 53 3 1 2 60 79 -8.380 -0.018 -6.697 -0.382 -0.955 0.345 0.532 D 52 50 3 53 3 0 0 58 77 -6.390 -1.568 -0.620 IR 53 53 3 53 3 1 1 61 80 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 18 ] - 57 - U - - MR 54 53 3 56 3 1 2 59 78 -8.380 -0.018 -6.697 -1.535 -1.523 -2.271 1.632 D 55 53 3 56 3 0 0 57 76 -6.390 -1.568 -0.620 IR 56 56 3 56 3 1 1 60 79 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 19 ] - 56 - U - - MR 57 56 3 59 3 1 1 58 77 -8.380 -0.018 -6.697 -1.535 -1.523 -2.271 1.632 D 58 56 3 59 3 0 0 56 75 -6.390 -1.568 -0.620 IR 59 59 3 59 3 1 1 59 78 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 20 ] - 55 - u - - MR 60 59 3 62 3 1 1 57 76 -8.380 -0.018 -6.697 0.557 -0.859 -1.066 0.585 D 61 59 3 62 3 0 0 55 74 -6.390 -1.568 -0.620 IR 62 62 3 62 3 1 1 58 77 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 21 ] - 54 - u - - MR 63 62 3 65 3 1 1 56 75 -8.380 -0.018 -6.697 -0.382 -0.955 0.345 0.532 D 64 62 3 65 3 0 0 54 74 -6.390 -1.568 -0.620 IR 65 65 3 65 3 1 1 57 76 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 22 ] - 53 - u - - MR 66 65 3 68 5 1 1 55 74 -7.117 -0.038 -6.932 -7.144 -8.036 -0.727 0.473 -1.508 0.728 D 67 65 3 68 5 0 0 54 73 -5.352 -0.707 -2.978 -4.409 -2.404 IR 68 68 3 68 5 1 1 55 74 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 23 ] 14 52 U A - - MP 69 68 3 73 6 2 2 54 73 -9.118 -9.058 -0.021 -7.834 -8.114 -8.509 -4.256 -4.083 -4.087 -0.373 -3.015 -4.645 1.315 -3.716 -4.092 -0.129 -4.462 -1.980 3.359 -4.405 -0.690 -2.909 ML 70 68 3 73 6 1 1 52 72 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 71 68 3 73 6 1 1 52 71 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 72 68 3 73 6 0 0 50 69 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 73 73 5 73 6 1 1 54 73 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 74 74 6 74 5 1 1 53 72 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 24 ] 15 51 C G - - MP 75 74 6 79 6 2 2 52 71 -9.118 -9.058 -0.021 -7.834 -8.114 -8.509 -4.612 -4.524 -4.292 -0.750 -2.996 -4.695 3.570 -3.812 -4.343 -0.519 -4.597 -2.472 0.512 -4.677 -0.704 -3.181 ML 76 74 6 79 6 1 1 50 70 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 77 74 6 79 6 1 1 50 69 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 78 74 6 79 6 0 0 48 67 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 79 79 5 79 6 1 1 52 71 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 80 80 6 80 5 1 1 51 70 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 25 ] 16 50 A U - - MP 81 80 6 85 6 2 2 50 69 -9.118 -9.058 -0.021 -7.834 -8.114 -8.509 -3.842 -2.861 -3.857 3.364 -4.221 -5.288 0.082 -3.896 -3.747 1.023 -4.297 -0.328 -0.335 -4.467 -1.858 -2.688 ML 82 80 6 85 6 1 1 48 68 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 83 80 6 85 6 1 1 48 68 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 84 80 6 85 6 0 0 46 65 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 85 85 5 85 6 1 1 50 69 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 86 86 6 86 5 1 1 49 68 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 26 ] 17 49 A U - - MP 87 86 6 91 6 2 2 48 67 -9.118 -9.058 -0.021 -7.834 -8.114 -8.509 -3.842 -2.861 -3.857 3.364 -4.221 -5.288 0.082 -3.896 -3.747 1.023 -4.297 -0.328 -0.335 -4.467 -1.858 -2.688 ML 88 86 6 91 6 1 1 47 66 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 89 86 6 91 6 1 1 46 66 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 90 86 6 91 6 0 0 44 64 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 91 91 5 91 6 1 1 48 67 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 92 92 6 92 5 1 1 47 66 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 27 ] 18 48 U A - - MP 93 92 6 97 6 2 2 46 65 -9.118 -9.058 -0.021 -7.834 -8.114 -8.509 -4.256 -4.083 -4.087 -0.373 -3.015 -4.645 1.315 -3.716 -4.092 -0.129 -4.462 -1.980 3.359 -4.405 -0.690 -2.909 ML 94 92 6 97 6 1 1 45 65 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 95 92 6 97 6 1 1 45 64 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 96 92 6 97 6 0 0 43 63 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 97 97 5 97 6 1 1 46 65 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 98 98 6 98 5 1 1 45 65 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 28 ] 19 47 G U - - MP 99 98 6 103 4 2 2 44 63 -6.977 -7.184 -0.052 -5.598 -3.651 -2.410 -3.821 1.112 -4.567 -5.291 -0.165 -3.840 -3.474 1.309 -3.997 3.120 -0.523 -4.491 -2.107 -2.514 ML 100 98 6 103 4 1 1 44 64 -3.758 -3.940 -0.507 -2.670 0.368 -0.385 -0.191 0.094 MR 101 98 6 103 4 1 1 44 63 -4.809 -3.838 -1.706 -0.766 0.368 -0.385 -0.191 0.094 D 102 98 6 103 4 0 0 43 62 -4.568 -4.250 -2.265 -0.520 IL 103 103 5 103 4 1 1 46 65 -1.686 -2.369 -1.117 -4.855 0.000 0.000 0.000 0.000 IR 104 104 6 104 3 1 1 45 64 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 29 ] 20 - G - - - ML 105 104 6 107 3 1 1 41 60 -7.991 -0.020 -6.645 -1.638 -2.867 1.736 -2.254 D 106 104 6 107 3 0 0 40 59 -6.174 -1.687 -0.566 IL 107 107 3 107 3 1 1 44 63 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 30 ] 21 - A - - - ML 108 107 3 110 3 1 1 40 59 -7.991 -0.020 -6.645 1.730 -2.426 -2.052 -1.973 D 109 107 3 110 3 0 0 39 58 -6.174 -1.687 -0.566 IL 110 110 3 110 3 1 1 43 62 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 31 ] 22 - A - - - ML 111 110 3 113 3 1 1 39 58 -7.991 -0.020 -6.645 1.730 -2.426 -2.052 -1.973 D 112 110 3 113 3 0 0 38 57 -6.174 -1.687 -0.566 IL 113 113 3 113 3 1 1 42 61 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 32 ] 23 - C - - - ML 114 113 3 116 3 1 1 38 57 -7.991 -0.020 -6.645 -1.806 1.641 -2.632 -1.207 D 115 113 3 116 3 0 0 37 56 -6.174 -1.687 -0.566 IL 116 116 3 116 3 1 1 40 60 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 33 ] 24 - U - - - ML 117 116 3 119 3 1 1 37 56 -7.991 -0.020 -6.645 -1.535 -1.523 -2.271 1.632 D 118 116 3 119 3 0 0 36 55 -6.174 -1.687 -0.566 IL 119 119 3 119 3 1 1 39 59 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 34 ] 25 - G - - - ML 120 119 3 122 5 1 1 36 55 -7.117 -0.038 -6.932 -7.144 -8.036 -1.638 -2.867 1.736 -2.254 D 121 119 3 122 5 0 0 34 53 -4.959 -0.803 -4.221 -2.596 -2.508 IL 122 122 3 122 5 1 1 36 55 -2.408 -0.496 -4.087 -5.920 -5.193 0.000 0.000 0.000 0.000 [ MATP 35 ] 26 46 u a - - MP 123 122 3 127 6 2 2 35 54 -9.118 -9.058 -0.021 -7.834 -8.114 -8.509 -2.535 -2.538 -2.636 0.735 -2.270 -3.402 1.630 -2.751 -2.690 1.032 -3.197 -0.817 2.067 1.032 -0.189 -1.750 ML 124 122 3 127 6 1 1 33 52 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 125 122 3 127 6 1 1 33 52 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 126 122 3 127 6 0 0 31 50 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 127 127 5 127 6 1 1 34 53 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 128 128 6 128 5 1 1 34 53 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 36 ] 27 45 U A - - MP 129 128 6 133 6 2 2 33 52 -9.118 -9.058 -0.021 -7.834 -8.114 -8.509 -4.256 -4.083 -4.087 -0.373 -3.015 -4.645 1.315 -3.716 -4.092 -0.129 -4.462 -1.980 3.359 -4.405 -0.690 -2.909 ML 130 128 6 133 6 1 1 31 50 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 131 128 6 133 6 1 1 31 50 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 132 128 6 133 6 0 0 29 48 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 133 133 5 133 6 1 1 32 51 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 134 134 6 134 5 1 1 32 51 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 37 ] 28 44 U G - - MP 135 134 6 139 6 2 2 31 50 -9.118 -9.058 -0.021 -7.834 -8.114 -8.509 -4.148 -4.071 -3.837 -0.400 -2.577 -4.252 1.711 -3.355 -3.878 -0.217 -4.164 -2.070 0.854 -4.228 3.041 -2.746 ML 136 134 6 139 6 1 1 29 48 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 137 134 6 139 6 1 1 29 48 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 138 134 6 139 6 0 0 27 46 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 139 139 5 139 6 1 1 30 49 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 140 140 6 140 5 1 1 30 49 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 38 ] 29 43 C G - - MP 141 140 6 145 6 2 2 29 48 -9.118 -9.058 -0.021 -7.834 -8.114 -8.509 -4.612 -4.524 -4.292 -0.750 -2.996 -4.695 3.570 -3.812 -4.343 -0.519 -4.597 -2.472 0.512 -4.677 -0.704 -3.181 ML 142 140 6 145 6 1 1 27 46 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 143 140 6 145 6 1 1 27 46 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 144 140 6 145 6 0 0 25 44 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 145 145 5 145 6 1 1 28 47 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 146 146 6 146 5 1 1 28 47 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 39 ] 30 42 U A - - MP 147 146 6 151 6 2 2 27 46 -9.118 -9.058 -0.021 -7.834 -8.114 -8.509 -4.256 -4.083 -4.087 -0.373 -3.015 -4.645 1.315 -3.716 -4.092 -0.129 -4.462 -1.980 3.359 -4.405 -0.690 -2.909 ML 148 146 6 151 6 1 1 25 44 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 149 146 6 151 6 1 1 25 44 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 150 146 6 151 6 0 0 23 42 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 151 151 5 151 6 1 1 26 45 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 152 152 6 152 5 1 1 26 45 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 40 ] 31 41 U A - - MP 153 152 6 157 6 2 2 25 44 -9.118 -9.058 -0.021 -7.834 -8.114 -8.509 -4.256 -4.083 -4.087 -0.373 -3.015 -4.645 1.315 -3.716 -4.092 -0.129 -4.462 -1.980 3.359 -4.405 -0.690 -2.909 ML 154 152 6 157 6 1 1 24 42 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 155 152 6 157 6 1 1 23 42 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 156 152 6 157 6 0 0 21 40 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 157 157 5 157 6 1 1 24 43 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 158 158 6 158 5 1 1 24 43 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 41 ] 32 40 C G - - MP 159 158 6 163 6 2 2 23 41 -9.118 -9.058 -0.021 -7.834 -8.114 -8.509 -4.612 -4.524 -4.292 -0.750 -2.996 -4.695 3.570 -3.812 -4.343 -0.519 -4.597 -2.472 0.512 -4.677 -0.704 -3.181 ML 160 158 6 163 6 1 1 22 41 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 161 158 6 163 6 1 1 22 41 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 162 158 6 163 6 0 0 20 39 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 163 163 5 163 6 1 1 23 41 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 164 164 6 164 5 1 1 22 41 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 42 ] 33 39 u a - - MP 165 164 6 169 4 2 2 21 39 -6.977 -7.184 -0.052 -5.598 -3.471 -3.457 -3.397 0.160 -2.460 -4.002 1.815 -3.140 -3.422 0.374 -3.834 -1.543 2.328 -3.643 1.860 -2.341 ML 166 164 6 169 4 1 1 22 40 -3.758 -3.940 -0.507 -2.670 0.368 -0.385 -0.191 0.094 MR 167 164 6 169 4 1 1 21 40 -4.809 -3.838 -1.706 -0.766 0.368 -0.385 -0.191 0.094 D 168 164 6 169 4 0 0 20 39 -4.568 -4.250 -2.265 -0.520 IL 169 169 5 169 4 1 1 23 42 -1.686 -2.369 -1.117 -4.855 0.000 0.000 0.000 0.000 IR 170 170 6 170 3 1 1 22 41 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 43 ] 34 - G - - - ML 171 170 6 173 3 1 1 18 36 -7.991 -0.020 -6.645 -1.638 -2.867 1.736 -2.254 D 172 170 6 173 3 0 0 17 36 -6.174 -1.687 -0.566 IL 173 173 3 173 3 1 1 21 40 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 44 ] 35 - G - - - ML 174 173 3 176 3 1 1 16 35 -7.991 -0.020 -6.645 -1.638 -2.867 1.736 -2.254 D 175 173 3 176 3 0 0 16 34 -6.174 -1.687 -0.566 IL 176 176 3 176 3 1 1 20 38 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 45 ] 36 - U - - - ML 177 176 3 179 3 1 1 15 33 -7.991 -0.020 -6.645 -1.535 -1.523 -2.271 1.632 D 178 176 3 179 3 0 0 15 33 -6.174 -1.687 -0.566 IL 179 179 3 179 3 1 1 19 37 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 46 ] 37 - U - - - ML 180 179 3 182 3 1 1 13 31 -7.991 -0.020 -6.645 -1.535 -1.523 -2.271 1.632 D 181 179 3 182 3 0 0 13 32 -6.174 -1.687 -0.566 IL 182 182 3 182 3 1 1 18 36 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 47 ] 38 - U - - - ML 183 182 3 185 2 1 1 1 1 * 0.000 -1.535 -1.523 -2.271 1.632 D 184 182 3 185 2 0 0 0 0 * 0.000 IL 185 185 3 185 2 1 1 13 28 -1.823 -0.479 0.000 0.000 0.000 0.000 [ END 48 ] - - - - - - E 186 185 3 -1 0 0 0 0 0 // HMMER3/f [3.4 | Aug 2023] NAME mir-9418 ACC RF03388 DESC mir-9418 microRNA precursor family LENG 61 MAXL 148 ALPH RNA RF no MM no CONS yes CS yes MAP yes DATE Wed Jul 10 00:06:50 2024 COM [1] /hps/software/users/agb/rfam/bin/cmbuild -F CM SEED COM [2] /hps/software/users/agb/rfam/bin/cmcalibrate --cpu 8 /nfs/production/agb/rfam/15/rescan/families/RF03388/CM NSEQ 2 EFFN 1.761719 CKSUM 2979411565 STATS LOCAL MSV -8.2840 0.72990 STATS LOCAL VITERBI -9.4241 0.72990 STATS LOCAL FORWARD -2.9992 0.72990 HMM A C G U m->m m->i m->d i->m i->i d->m d->d COMPO 1.38078 1.65857 1.42087 1.14979 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 0.00000 * 1 2.33322 2.34541 2.83728 0.28952 1 U - - : 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 2 2.48415 0.29187 3.05129 2.10013 2 C - - : 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 3 0.21551 2.93915 2.69319 2.61325 3 A - - : 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 4 2.33322 2.34541 2.83728 0.28952 4 U - - : 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 5 1.01000 1.95165 2.09282 0.99316 5 u - - : 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 6 2.48415 0.29187 3.05129 2.10013 6 C - - : 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 7 0.21551 2.93915 2.69319 2.61325 7 A - - : 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 8 0.21551 2.93915 2.69319 2.61325 8 A - - : 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 9 2.38519 3.21540 0.21523 2.78978 9 G - - : 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 10 2.33322 2.34541 2.83728 0.28952 10 U - - : 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 11 2.38519 3.21540 0.21523 2.78978 11 G - - : 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 12 2.48415 0.29187 3.05129 2.10013 12 C - - : 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 13 0.21551 2.93915 2.69319 2.61325 13 A - - : 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 14 2.65282 1.67795 2.36718 0.43225 14 U - - < 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 15 2.89706 0.32651 2.63294 1.88712 15 C - - < 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 16 0.48781 2.42779 1.58685 2.37268 16 A - - < 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 17 0.48779 2.42785 1.58686 2.37278 17 A - - < 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 18 2.65728 1.67798 2.36884 0.43152 18 U - - < 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 19 1.79429 2.59033 0.39274 2.48223 19 G - - < 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 20 2.38519 3.21540 0.21523 2.78978 20 G - - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 21 0.21551 2.93915 2.69319 2.61325 21 A - - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 22 0.21551 2.93915 2.69319 2.61325 22 A - - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 23 2.48415 0.29187 3.05129 2.10013 23 C - - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 24 2.33322 2.34541 2.83728 0.28952 24 U - - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 25 2.38519 3.21540 0.21523 2.78978 25 G - - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 26 1.92618 1.48937 1.64507 0.83061 26 u - - < 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 27 2.65836 1.67798 2.36924 0.43134 27 U - - < 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 28 2.66633 1.43896 2.41732 0.50392 28 U - - < 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 29 2.89918 0.32618 2.63384 1.88745 29 C - - < 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 30 2.65724 1.67798 2.36883 0.43153 30 U - - < 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 31 2.65677 1.67797 2.36865 0.43160 31 U - - < 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 32 2.89734 0.32646 2.63306 1.88716 32 C - - < 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 33 2.34199 1.38308 2.09355 0.63524 33 U - - < 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 34 2.38519 3.21540 0.21523 2.78978 34 G - - _ 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 35 2.38519 3.21540 0.21523 2.78978 35 G - - _ 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 36 2.33322 2.34541 2.83728 0.28952 36 U - - _ 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 37 2.33322 2.34541 2.83728 0.28952 37 U - - _ 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 38 2.33322 2.34541 2.83728 0.28952 38 U - - _ 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 39 1.11629 2.25668 0.80429 2.11690 39 g - - > 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 40 2.16088 2.79928 0.28292 2.65443 40 G - - > 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 41 0.49120 2.54649 1.51468 2.40938 41 A - - > 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 42 0.49118 2.54655 1.51468 2.40946 42 A - - > 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 43 2.16101 2.79943 0.28286 2.65464 43 G - - > 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 44 1.94004 2.58836 0.36858 2.41417 44 G - - > 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 45 0.49156 2.54537 1.51468 2.40786 45 A - - > 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 46 1.25240 1.32476 1.30964 1.72373 46 a - - > 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 47 2.69998 1.65922 2.39548 0.42867 47 U - - > 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 48 0.49096 2.54720 1.51468 2.41036 48 A - - > 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 49 2.60455 1.84745 2.24329 0.41201 49 U - - > 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 50 2.60564 1.84752 2.24363 0.41182 50 U - - > 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 51 2.16368 2.80262 0.28181 2.65878 51 G - - > 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 52 0.49026 2.54934 1.51467 2.41328 52 A - - > 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 53 1.83952 1.08340 2.37424 0.89263 53 u - - : 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 54 1.61878 2.01373 1.16859 1.02844 54 u - - : 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 55 1.01000 1.95165 2.09282 0.99316 55 u - - : 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 56 2.33322 2.34541 2.83728 0.28952 56 U - - : 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 57 2.33322 2.34541 2.83728 0.28952 57 U - - : 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 58 1.61878 2.01373 1.16859 1.02844 58 u - - : 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 59 1.01000 1.95165 2.09282 0.99316 59 u - - : 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 60 2.33322 2.34541 2.83728 0.28952 60 U - - : 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 61 0.90581 2.31513 1.05453 1.90598 61 a - - : 1.38629 1.38629 1.38629 1.38629 0.02469 3.71357 * 1.46634 0.26236 0.00000 * //