INFERNAL1/a [1.1.5 | Sep 2023] NAME mir-7398 ACC RF03378 DESC mir-7398 microRNA precursor family STATES 184 NODES 44 CLEN 60 W 80 ALPH RNA RF no CONS yes MAP yes DATE Mon Jul 8 12:24:46 2024 COM [1] /hps/software/users/agb/rfam/bin/cmbuild -F CM SEED COM [2] /hps/software/users/agb/rfam/bin/cmcalibrate --cpu 8 /nfs/production/agb/rfam/15/rescan/families/RF03378/CM PBEGIN 0.05 PEND 0.05 WBETA 1e-07 QDBBETA1 1e-07 QDBBETA2 1e-15 N2OMEGA 1.52588e-05 N3OMEGA 1.52588e-05 ELSELF -0.08926734 NSEQ 23 EFFN 7.089233 CKSUM 4258105003 NULL 0.000 0.000 0.000 0.000 GA 44.00 TC 44.70 NC 42.10 EFP7GF -13.7114 0.71936 ECMLC 0.64036 -5.60529 3.49095 1600000 406323 0.002953 ECMGC 0.43642 -15.74837 -2.28059 1600000 142781 0.002801 ECMLI 0.60705 -4.83177 4.37697 1600000 321334 0.003734 ECMGI 0.44974 -12.06863 0.18523 1600000 98967 0.004042 CM [ ROOT 0 ] - - - - - - S 0 -1 0 1 4 1 1 80 104 -8.250 -8.457 -0.084 -4.310 IL 1 1 2 1 4 1 17 83 107 -1.686 -2.369 -1.117 -4.855 0.000 0.000 0.000 0.000 IR 2 2 3 2 3 1 17 82 106 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 1 ] 2 - U - - - ML 3 2 3 5 3 1 17 80 104 -9.480 -0.009 -7.798 -0.961 -1.131 -2.449 1.509 D 4 2 3 5 3 0 10 78 102 -6.242 -1.356 -0.746 IL 5 5 3 5 3 1 16 80 104 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 2 ] - 64 - U - - MR 6 5 3 8 3 1 16 79 103 -9.480 -0.009 -7.798 -2.649 -1.543 -3.394 1.766 D 7 5 3 8 3 0 9 77 101 -7.194 -2.372 -0.322 IR 8 8 3 8 3 1 15 79 104 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 3 ] - 63 - G - - MR 9 8 3 11 3 1 15 78 102 -9.480 -0.009 -7.798 0.179 -2.292 1.189 -1.381 D 10 8 3 11 3 0 9 76 101 -7.194 -0.688 -1.424 IR 11 11 3 11 3 1 13 78 103 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 4 ] - 62 - A - - MR 12 11 3 14 5 1 14 77 101 -8.223 -0.075 -8.038 -4.590 -9.142 1.328 -1.390 -1.975 -0.228 D 13 11 3 14 5 0 7 75 100 -5.352 -0.707 -2.978 -4.409 -2.404 IR 14 14 3 14 5 1 11 77 101 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 5 ] 3 61 G C - - MP 15 14 3 19 6 2 15 76 100 -9.711 -9.651 -0.014 -8.427 -8.707 -9.102 -5.527 -3.713 -5.551 -0.430 -6.134 -5.246 -1.325 -5.940 -5.098 3.716 -5.365 -1.432 -0.087 -5.033 -3.381 -4.463 ML 16 14 3 19 6 1 8 74 98 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 17 14 3 19 6 1 8 74 99 -7.529 -6.258 -0.901 -6.236 -1.370 -4.449 -0.184 0.643 -0.897 0.030 D 18 14 3 19 6 0 3 72 96 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 19 19 5 19 6 1 10 75 99 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 20 20 6 20 5 1 10 75 99 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 6 ] 4 60 U A - - MP 21 20 6 25 6 2 14 74 98 -9.748 -9.687 -0.014 -8.464 -8.744 -9.139 -4.018 -4.071 -4.017 -0.510 -3.197 -4.690 1.485 -3.839 -4.032 -0.409 -4.488 -2.229 3.103 0.237 0.177 -2.990 ML 22 20 6 25 6 1 8 73 97 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 23 20 6 25 6 1 6 72 97 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 24 20 6 25 6 0 3 70 95 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 25 25 5 25 6 1 9 73 98 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 26 26 6 26 5 1 9 73 97 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 7 ] 5 59 G C - - MP 27 26 6 31 4 2 12 72 96 -8.250 -8.457 -0.021 -6.871 -5.262 -3.577 -5.295 -0.209 -6.363 -5.309 -1.494 -5.775 -0.027 3.556 -5.297 0.432 -1.749 -4.951 -3.520 -4.193 ML 28 26 6 31 4 1 7 72 96 -3.758 -3.940 -0.507 -2.670 0.368 -0.385 -0.191 0.094 MR 29 26 6 31 4 1 4 71 95 -4.809 -3.838 -1.706 -0.766 0.368 -0.385 -0.191 0.094 D 30 26 6 31 4 0 3 70 94 -4.568 -4.250 -2.265 -0.520 IL 31 31 5 31 4 1 9 73 97 -1.686 -2.369 -1.117 -4.855 0.000 0.000 0.000 0.000 IR 32 32 6 32 3 1 8 72 96 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 8 ] 6 - U - - - ML 33 32 6 35 5 1 11 70 94 -8.223 -0.018 -8.038 -8.250 -9.142 -3.711 -3.381 -4.502 1.920 D 34 32 6 35 5 0 2 68 92 -4.959 -0.803 -4.221 -2.596 -2.508 IL 35 35 3 35 5 1 6 70 94 -2.408 -0.496 -4.087 -5.920 -5.193 0.000 0.000 0.000 0.000 [ MATP 9 ] 7 58 A U - - MP 36 35 3 40 6 2 11 69 93 -9.748 -9.687 -0.014 -8.464 -8.744 -9.139 -5.020 -3.702 -5.198 3.421 -7.061 -8.058 -2.548 -5.256 -4.794 -0.267 -5.449 1.910 -2.569 -6.368 -4.407 -3.819 ML 37 35 3 40 6 1 4 67 91 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 38 35 3 40 6 1 4 67 91 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 39 35 3 40 6 0 0 64 88 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 40 40 5 40 6 1 5 68 92 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 41 41 6 41 5 1 6 68 92 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 10 ] 8 57 G C - - MP 42 41 6 46 6 2 10 67 91 -9.748 -9.687 -0.014 -8.464 -8.744 -9.139 -5.012 -3.431 -4.993 0.696 -6.186 -5.310 -1.273 -5.489 -4.863 3.473 -5.199 1.021 -1.519 -4.808 -3.293 -3.874 ML 43 41 6 46 6 1 4 65 89 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 44 41 6 46 6 1 3 65 89 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 45 41 6 46 6 0 0 62 87 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 46 46 5 46 6 1 5 66 90 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 47 47 6 47 5 1 5 66 90 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 11 ] 9 56 A U - - MP 48 47 6 52 6 2 8 65 89 -9.748 -9.687 -0.014 -8.464 -8.744 -9.139 -6.078 -4.798 -5.517 3.902 -7.389 -8.711 -3.004 -5.431 -5.833 -1.415 -6.458 -2.068 -3.336 -7.394 -4.905 -4.546 ML 49 47 6 52 6 1 3 63 87 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 50 47 6 52 6 1 3 63 87 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 51 47 6 52 6 0 0 60 85 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 52 52 5 52 6 1 4 64 88 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 53 53 6 53 5 1 5 64 88 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 12 ] 10 55 G C - - MP 54 53 6 58 6 2 6 63 87 -9.748 -9.687 -0.014 -8.464 -8.744 -9.139 -4.569 -0.721 -4.467 0.692 -5.500 -4.832 -0.660 -5.087 -4.623 3.461 -1.798 -0.323 -0.922 -4.244 -2.659 -3.428 ML 55 53 6 58 6 1 3 61 85 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 56 53 6 58 6 1 3 61 85 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 57 53 6 58 6 0 0 59 83 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 58 58 5 58 6 1 4 62 86 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 59 59 6 59 5 1 4 62 86 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 13 ] 11 54 G C - - MP 60 59 6 64 6 2 4 61 85 -9.748 -9.687 -0.014 -8.464 -8.744 -9.139 -4.010 -1.556 -3.925 1.749 -4.788 -4.585 -0.222 -4.503 -0.234 3.041 -4.546 -0.128 -0.469 -3.856 -2.149 -2.914 ML 61 59 6 64 6 1 2 60 84 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 62 59 6 64 6 1 2 59 84 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 63 59 6 64 6 0 0 58 82 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 64 64 5 64 6 1 3 60 85 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 65 65 6 65 5 1 3 60 84 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 14 ] 12 53 c g - - MP 66 65 6 70 4 2 2 59 83 -8.250 -8.457 -0.565 -1.653 -2.347 -2.495 -2.522 1.068 -0.716 -3.372 2.050 -2.750 -2.565 0.603 -3.129 0.579 1.240 -2.668 1.032 -0.998 ML 67 65 6 70 4 1 1 59 83 -3.758 -3.940 -0.507 -2.670 0.368 -0.385 -0.191 0.094 MR 68 65 6 70 4 1 1 58 82 -4.809 -3.838 -1.706 -0.766 0.368 -0.385 -0.191 0.094 D 69 65 6 70 4 0 0 57 81 -4.568 -4.250 -2.265 -0.520 IL 70 70 5 70 4 1 3 60 84 -1.686 -2.369 -1.117 -4.855 0.000 0.000 0.000 0.000 IR 71 71 6 71 3 1 2 59 83 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 15 ] 13 - a - - - ML 72 71 6 74 5 1 2 57 81 -7.743 -0.025 -7.559 -7.771 -8.663 0.821 -1.516 0.288 -0.595 D 73 71 6 74 5 0 0 56 80 -7.188 -0.138 -6.449 -4.824 -4.737 IL 74 74 3 74 5 1 1 57 81 -2.408 -0.496 -4.087 -5.920 -5.193 0.000 0.000 0.000 0.000 [ MATP 16 ] 14 52 g c - - MP 75 74 3 79 6 2 4 56 80 -9.748 -9.687 -0.014 -8.464 -8.744 -9.139 -4.214 0.517 -4.142 2.091 -5.167 -4.928 -0.499 -4.669 -4.357 2.654 -4.723 1.037 -0.737 -4.156 -2.447 -3.071 ML 76 74 3 79 6 1 1 54 78 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 77 74 3 79 6 1 1 54 78 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 78 74 3 79 6 0 0 52 76 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 79 79 5 79 6 1 1 55 80 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 80 80 6 80 5 1 1 55 79 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 17 ] 15 51 g c - - MP 81 80 6 85 6 2 3 54 78 -9.748 -9.687 -0.070 -8.464 -4.626 -9.139 -4.277 -3.055 -4.260 1.850 -5.261 -5.161 -0.663 -4.695 -4.364 2.414 -4.769 2.199 -0.897 -4.372 -2.601 -0.526 ML 82 80 6 85 6 1 1 52 76 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 83 80 6 85 6 1 1 52 76 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 84 80 6 85 6 0 0 50 74 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 85 85 5 85 6 1 1 53 78 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 86 86 6 86 5 1 1 53 77 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 18 ] 16 50 g c - - MP 87 86 6 91 6 2 3 52 76 -9.692 -9.631 -0.014 -8.408 -8.688 -9.083 -2.755 -1.186 -2.850 0.900 -3.086 -3.622 0.549 -1.352 -3.013 2.733 -3.499 -0.464 0.370 0.138 -1.072 -0.155 ML 88 86 6 91 6 1 1 50 74 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 89 86 6 91 6 1 1 51 75 -7.742 -6.471 -0.738 -6.450 -1.583 -4.663 -0.375 0.870 -1.107 -0.095 D 90 86 6 91 6 0 0 48 72 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 91 91 5 91 6 1 1 51 76 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 92 92 6 92 5 1 1 51 75 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 19 ] 17 49 a u - - MP 93 92 6 97 6 2 3 50 74 -9.748 -9.687 -0.014 -8.464 -8.744 -9.139 -2.833 1.213 -3.250 2.217 -3.423 -3.524 0.213 -3.367 -0.875 0.853 -3.145 1.502 0.442 -3.212 -1.428 -2.213 ML 94 92 6 97 6 1 1 48 73 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 95 92 6 97 6 1 1 48 72 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 96 92 6 97 6 0 0 46 70 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 97 97 5 97 6 1 1 49 74 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 98 98 6 98 5 1 1 49 73 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 20 ] 18 48 A U - - MP 99 98 6 103 6 2 2 48 72 -9.748 -9.687 -0.211 -2.951 -8.744 -9.139 -4.993 1.197 -5.166 3.550 -6.834 -7.856 -2.400 -5.224 -4.778 -0.262 -5.427 -1.015 -2.474 -6.288 -4.254 -3.802 ML 100 98 6 103 6 1 1 47 71 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 101 98 6 103 6 1 1 47 71 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 102 98 6 103 6 0 0 45 69 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 103 103 5 103 6 1 1 48 72 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 104 104 6 104 5 1 1 47 71 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 21 ] 19 47 A U - - MP 105 104 6 109 4 2 2 46 70 -7.910 -8.117 -0.027 -6.531 -4.302 -3.076 -4.338 3.015 -5.441 -5.596 -0.867 -4.643 -4.279 2.279 -4.784 0.435 -1.075 -4.685 -2.806 -3.148 ML 106 104 6 109 4 1 1 45 69 -5.321 -5.503 -0.152 -4.233 0.153 0.719 -1.243 -0.287 MR 107 104 6 109 4 1 1 45 69 -4.809 -3.838 -1.706 -0.766 0.368 -0.385 -0.191 0.094 D 108 104 6 109 4 0 0 44 68 -4.568 -4.250 -2.265 -0.520 IL 109 109 5 109 4 1 1 47 71 -1.686 -2.369 -1.117 -4.855 0.000 0.000 0.000 0.000 IR 110 110 6 110 3 1 1 46 70 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 22 ] 20 - u - - - ML 111 110 6 113 3 1 1 44 68 -9.203 -0.009 -7.857 -0.717 -1.598 0.466 0.748 D 112 110 6 113 3 0 0 42 66 -6.174 -1.687 -0.566 IL 113 113 3 113 3 1 1 45 69 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 23 ] 21 - A - - - ML 114 113 3 116 3 1 1 43 67 -9.203 -0.009 -7.857 1.213 -2.001 -0.146 -0.923 D 115 113 3 116 3 0 0 41 65 -6.174 -1.687 -0.566 IL 116 116 3 116 3 1 1 44 68 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 24 ] 22 - U - - - ML 117 116 3 119 3 1 1 42 66 -9.538 -0.008 -7.856 -2.555 -1.070 -3.309 1.702 D 118 116 3 119 3 0 0 41 65 -5.620 -0.734 -1.403 IL 119 119 3 119 3 1 1 43 67 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 25 ] - 46 - a - - MR 120 119 3 122 3 1 1 41 65 -9.538 -0.008 -7.856 0.938 -0.402 -1.654 0.013 D 121 119 3 122 3 0 0 39 63 -6.390 -1.568 -0.620 IR 122 122 3 122 3 1 1 42 66 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 26 ] - 45 - A - - MR 123 122 3 125 3 1 1 40 64 -9.538 -0.008 -7.856 1.709 -2.677 -2.756 -1.231 D 124 122 3 125 3 0 0 38 62 -6.390 -1.568 -0.620 IR 125 125 3 125 3 1 1 41 65 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 27 ] - 44 - A - - MR 126 125 3 128 5 1 1 39 63 -8.223 -0.018 -8.038 -8.250 -9.142 1.947 -4.678 -4.138 -4.396 D 127 125 3 128 5 0 0 37 62 -5.352 -0.707 -2.978 -4.409 -2.404 IR 128 128 3 128 5 1 1 39 63 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 28 ] 23 43 G U - - MP 129 128 3 133 6 2 2 38 62 -9.748 -9.687 -0.014 -8.464 -8.744 -9.139 -4.977 -3.644 -5.153 2.368 -6.983 -7.659 -2.418 -5.230 -4.765 0.791 -5.394 3.063 -2.458 -6.198 -4.296 -3.784 ML 130 128 3 133 6 1 1 36 60 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 131 128 3 133 6 1 1 36 60 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 132 128 3 133 6 0 0 34 58 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 133 133 5 133 6 1 1 37 62 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 134 134 6 134 5 1 1 37 61 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 29 ] 24 42 C G - - MP 135 134 6 139 6 2 2 36 60 -9.748 -9.687 -0.014 -8.464 -8.744 -9.139 -5.933 -6.083 -5.359 -2.228 -3.777 -5.575 3.724 -4.672 -5.438 -2.138 -5.599 -4.231 -0.401 -5.835 0.299 -4.234 ML 136 134 6 139 6 1 1 34 58 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 137 134 6 139 6 1 1 34 58 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 138 134 6 139 6 0 0 32 56 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 139 139 5 139 6 1 1 35 60 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 140 140 6 140 5 1 1 35 59 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 30 ] 25 41 u g - - MP 141 140 6 145 4 2 2 34 58 -8.250 -1.816 -0.506 -6.871 -5.703 -5.820 -5.212 -1.967 -3.689 -5.480 2.640 -4.557 -5.271 -1.859 -5.477 -3.924 0.688 -5.648 2.853 -4.074 ML 142 140 6 145 4 1 1 32 56 -3.758 -3.940 -0.507 -2.670 0.368 -0.385 -0.191 0.094 MR 143 140 6 145 4 1 1 32 56 -4.809 -3.838 -1.706 -0.766 0.368 -0.385 -0.191 0.094 D 144 140 6 145 4 0 0 31 55 -4.568 -4.250 -2.265 -0.520 IL 145 145 5 145 4 1 1 34 58 -1.686 -2.369 -1.117 -4.855 0.000 0.000 0.000 0.000 IR 146 146 6 146 3 1 1 34 58 -1.099 -0.947 -6.138 0.000 0.000 0.000 0.000 [ MATL 31 ] 26 - G - - - ML 147 146 6 149 3 1 1 25 43 -9.203 -0.009 -7.857 -1.842 -4.107 1.839 -3.559 D 148 146 6 149 3 0 0 24 43 -6.174 -1.687 -0.566 IL 149 149 3 149 3 1 1 28 47 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 32 ] 27 - U - - - ML 150 149 3 152 3 1 1 23 42 -9.203 -0.009 -7.857 -2.730 -1.592 -3.474 1.777 D 151 149 3 152 3 0 0 23 42 -6.174 -1.687 -0.566 IL 152 152 3 152 3 1 1 27 46 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 33 ] 28 - G - - - ML 153 152 3 155 3 1 1 22 41 -9.203 -0.009 -7.857 -0.612 -2.185 1.318 -0.660 D 154 152 3 155 3 0 0 22 41 -6.174 -1.687 -0.566 IL 155 155 3 155 3 1 1 26 44 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 34 ] 29 - U - - - ML 156 155 3 158 3 1 1 21 40 -9.203 -0.009 -7.857 -0.586 -0.126 -2.050 1.122 D 157 155 3 158 3 0 0 21 40 -6.174 -1.687 -0.566 IL 158 158 3 158 3 1 1 25 43 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 35 ] 30 - U - - - ML 159 158 3 161 3 1 1 20 39 -9.203 -0.009 -7.857 -0.574 -2.073 -2.636 1.551 D 160 158 3 161 3 0 0 20 38 -6.174 -1.687 -0.566 IL 161 161 3 161 3 1 1 24 42 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 36 ] 31 - C - - - ML 162 161 3 164 3 1 1 19 37 -9.203 -0.009 -7.857 -1.612 1.306 -1.007 -0.510 D 163 161 3 164 3 0 0 19 37 -6.174 -1.687 -0.566 IL 164 164 3 164 3 1 1 23 41 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 37 ] 32 - U - - - ML 165 164 3 167 3 1 1 18 36 -9.203 -0.009 -7.857 -1.903 -2.463 -3.288 1.786 D 166 164 3 167 3 0 0 18 36 -6.174 -1.687 -0.566 IL 167 167 3 167 3 1 1 22 40 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 38 ] 33 - a - - - ML 168 167 3 170 3 1 1 16 35 -9.203 -0.009 -7.857 0.444 0.164 -0.058 -0.841 D 169 167 3 170 3 0 0 17 35 -6.174 -1.687 -0.566 IL 170 170 3 170 3 1 1 21 39 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 39 ] 34 - U - - - ML 171 170 3 173 3 1 1 15 34 -9.203 -0.009 -7.857 -2.300 -2.290 -1.858 1.730 D 172 170 3 173 3 0 0 16 34 -6.174 -1.687 -0.566 IL 173 173 3 173 3 1 1 19 38 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 40 ] 35 - C - - - ML 174 173 3 176 3 1 1 14 32 -9.203 -0.009 -7.857 -3.325 1.804 -4.138 -1.511 D 175 173 3 176 3 0 0 14 33 -6.174 -1.687 -0.566 IL 176 176 3 176 3 1 1 18 37 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 41 ] 36 - U - - - ML 177 176 3 179 3 1 1 12 31 -9.203 -0.422 -1.988 -0.010 -1.438 -0.745 1.029 D 178 176 3 179 3 0 0 13 32 -6.174 -1.687 -0.566 IL 179 179 3 179 3 1 1 18 36 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 42 ] 37 - u - - - ML 180 179 3 182 2 1 1 1 1 * 0.000 -0.529 0.108 -1.197 0.842 D 181 179 3 182 2 0 0 0 0 * 0.000 IL 182 182 3 182 2 1 1 13 28 -1.823 -0.479 0.000 0.000 0.000 0.000 [ END 43 ] - - - - - - E 183 182 3 -1 0 0 0 0 0 // HMMER3/f [3.4 | Aug 2023] NAME mir-7398 ACC RF03378 DESC mir-7398 microRNA precursor family LENG 60 MAXL 129 ALPH RNA RF no MM no CONS yes CS yes MAP yes DATE Mon Jul 8 12:24:46 2024 COM [1] /hps/software/users/agb/rfam/bin/cmbuild -F CM SEED COM [2] /hps/software/users/agb/rfam/bin/cmcalibrate --cpu 8 /nfs/production/agb/rfam/15/rescan/families/RF03378/CM NSEQ 23 EFFN 11.036743 CKSUM 4258105003 STATS LOCAL MSV -8.1591 0.71936 STATS LOCAL VITERBI -8.4279 0.71936 STATS LOCAL FORWARD -3.7665 0.71936 HMM A C G U m->m m->i m->d i->m i->i d->m d->d COMPO 1.50383 1.60335 1.39976 1.10913 1.38629 1.38629 1.38629 1.38629 0.13269 2.60434 2.98947 0.18864 1.76077 0.00000 * 1 2.16663 2.29514 3.47911 0.28256 2 U - - : 1.38629 1.38629 1.38629 1.38629 0.01552 4.86641 4.86641 1.46634 0.26236 2.17778 0.12024 2 3.40642 4.12362 0.12202 2.72535 3 G - - < 1.38629 1.38629 1.38629 1.38629 0.01552 4.86641 4.86641 1.46634 0.26236 0.25694 1.48463 3 3.68055 1.90517 3.49891 0.22845 4 U - - < 1.38629 1.38629 1.38629 1.38629 0.01485 4.91030 4.91030 1.46634 0.26236 1.09861 0.40547 4 3.26598 4.27174 0.07064 4.12972 5 G - - < 1.38629 1.38629 1.38629 1.38629 0.01485 4.91030 4.91030 1.46634 0.26236 1.09861 0.40547 5 4.51378 4.23679 5.07444 0.03218 6 U - - - 1.38629 1.38629 1.38629 1.38629 0.01485 4.91030 4.91030 1.46634 0.26236 1.09861 0.40547 6 0.35402 4.76309 1.28406 4.36710 7 A - - < 1.38629 1.38629 1.38629 1.38629 0.01485 4.91030 4.91030 1.46634 0.26236 1.09861 0.40547 7 2.33413 3.92837 0.15061 3.76175 8 G - - < 1.38629 1.38629 1.38629 1.38629 0.01485 4.91030 4.91030 1.46634 0.26236 1.09861 0.40547 8 0.03717 5.10356 3.77127 4.90778 9 A - - < 1.38629 1.38629 1.38629 1.38629 0.01485 4.91030 4.91030 1.46634 0.26236 1.09861 0.40547 9 2.02809 3.47287 0.22137 3.32524 10 G - - < 1.38629 1.38629 1.38629 1.38629 0.01485 4.91030 4.91030 1.46634 0.26236 1.09861 0.40547 10 1.39441 3.09544 0.42538 2.93285 11 G - - < 1.38629 1.38629 1.38629 1.38629 0.01485 4.91030 4.91030 1.46634 0.26236 1.09861 0.40547 11 1.87408 1.12024 1.60295 1.14256 12 c - - < 1.38629 1.38629 1.38629 1.38629 0.40389 4.91030 1.12420 1.46634 0.26236 1.09861 0.40547 12 0.76521 2.69310 1.12919 1.93936 13 a - - - 1.38629 1.38629 1.38629 1.38629 0.02184 4.52825 4.52825 1.46634 0.26236 0.04437 3.13732 13 0.91098 3.37556 0.64909 3.19048 14 G - - < 1.38629 1.38629 1.38629 1.38629 0.01485 4.91030 4.91030 1.46634 0.26236 1.09861 0.40547 14 1.41526 3.62568 0.42770 2.54462 15 G - - < 1.38629 1.38629 1.38629 1.38629 0.08299 4.91030 2.62738 1.46634 0.26236 1.09861 0.40547 15 1.97399 2.33993 0.62086 1.48157 16 G - - < 1.38629 1.38629 1.38629 1.38629 0.01589 4.84320 4.84320 1.46634 0.26236 0.18563 1.77540 16 0.55664 3.41243 1.15341 2.54662 17 A - - < 1.38629 1.38629 1.38629 1.38629 0.01485 4.91030 4.91030 1.46634 0.26236 1.09861 0.40547 17 0.08435 4.66411 2.84989 4.29685 18 A - - < 1.38629 1.38629 1.38629 1.38629 0.01485 4.91030 4.91030 1.46634 0.26236 1.09861 0.40547 18 0.63017 2.37229 1.13070 2.96761 19 A - - < 1.38629 1.38629 1.38629 1.38629 0.01485 4.91030 4.91030 1.46634 0.26236 1.09861 0.40547 19 2.07897 2.79562 0.98688 0.81843 20 u - - - 1.38629 1.38629 1.38629 1.38629 0.01485 4.91030 4.91030 1.46634 0.26236 1.09861 0.40547 20 0.48487 3.14512 1.46764 2.20102 21 A - - - 1.38629 1.38629 1.38629 1.38629 0.01485 4.91030 4.91030 1.46634 0.26236 1.09861 0.40547 21 3.59511 2.17409 4.11294 0.17142 22 U - - - 1.38629 1.38629 1.38629 1.38629 0.01485 4.91030 4.91030 1.46634 0.26236 1.09861 0.40547 22 1.10522 4.73661 0.43526 4.34285 23 G - - < 1.38629 1.38629 1.38629 1.38629 0.01485 4.91030 4.91030 1.46634 0.26236 1.09861 0.40547 23 4.46083 0.14708 4.35579 2.18579 24 C - - < 1.38629 1.38629 1.38629 1.38629 0.01485 4.91030 4.91030 1.46634 0.26236 1.09861 0.40547 24 4.36227 0.93248 4.24220 0.54594 25 U - - < 1.38629 1.38629 1.38629 1.38629 0.01485 4.91030 4.91030 1.46634 0.26236 1.09861 0.40547 25 2.77088 4.68536 0.08946 4.28745 26 G - - _ 1.38629 1.38629 1.38629 1.38629 0.01485 4.91030 4.91030 1.46634 0.26236 1.09861 0.40547 26 3.68317 2.58802 4.19420 0.12261 27 U - - _ 1.38629 1.38629 1.38629 1.38629 0.01485 4.91030 4.91030 1.46634 0.26236 1.09861 0.40547 27 1.91049 3.23674 0.41265 1.89177 28 G - - _ 1.38629 1.38629 1.38629 1.38629 0.01485 4.91030 4.91030 1.46634 0.26236 1.09861 0.40547 28 1.88517 1.46391 3.13726 0.55606 29 U - - _ 1.38629 1.38629 1.38629 1.38629 0.01485 4.91030 4.91030 1.46634 0.26236 1.09861 0.40547 29 1.81576 3.23727 3.68717 0.25751 30 U - - _ 1.38629 1.38629 1.38629 1.38629 0.01485 4.91030 4.91030 1.46634 0.26236 1.09861 0.40547 30 2.90257 0.40453 2.08568 1.87338 31 C - - _ 1.38629 1.38629 1.38629 1.38629 0.01485 4.91030 4.91030 1.46634 0.26236 1.09861 0.40547 31 2.85275 3.44309 4.04188 0.11341 32 U - - _ 1.38629 1.38629 1.38629 1.38629 0.01485 4.91030 4.91030 1.46634 0.26236 1.09861 0.40547 32 1.05961 1.20453 1.39097 2.25623 33 a - - _ 1.38629 1.38629 1.38629 1.38629 0.01485 4.91030 4.91030 1.46634 0.26236 1.09861 0.40547 33 3.39511 3.33551 2.71334 0.14554 34 U - - _ 1.38629 1.38629 1.38629 1.38629 0.01485 4.91030 4.91030 1.46634 0.26236 1.09861 0.40547 34 4.17495 0.10635 4.68280 2.57355 35 C - - _ 1.38629 1.38629 1.38629 1.38629 0.01485 4.91030 4.91030 1.46634 0.26236 1.09861 0.40547 35 1.41669 2.63269 1.93432 0.61419 36 U - - _ 1.38629 1.38629 1.38629 1.38629 0.32432 4.91030 1.31079 1.46634 0.26236 1.09861 0.40547 36 1.86951 1.26912 2.31338 0.76401 37 u - - _ 1.38629 1.38629 1.38629 1.38629 0.52928 0.91384 4.60617 0.71058 0.67601 0.05323 2.95960 37 2.37584 4.38724 0.12958 4.12472 41 G - - > 1.38629 1.38629 1.38629 1.38629 0.01485 4.91030 4.91030 1.46634 0.26236 1.09861 0.40547 38 3.28608 4.50076 0.06522 4.22407 42 G - - > 1.38629 1.38629 1.38629 1.38629 0.01485 4.91030 4.91030 1.46634 0.26236 1.09861 0.40547 39 4.53492 2.36126 4.50303 0.12342 43 U - - > 1.38629 1.38629 1.38629 1.38629 0.01485 4.91030 4.91030 1.46634 0.26236 1.09861 0.40547 40 0.02122 5.17968 4.78491 4.95967 44 A - - - 1.38629 1.38629 1.38629 1.38629 0.01485 4.91030 4.91030 1.46634 0.26236 1.09861 0.40547 41 0.16437 3.62640 3.72649 2.29378 45 A - - - 1.38629 1.38629 1.38629 1.38629 0.01485 4.91030 4.91030 1.46634 0.26236 1.09861 0.40547 42 0.67831 1.67381 2.79662 1.41068 46 A - - - 1.38629 1.38629 1.38629 1.38629 0.26120 4.91030 1.50280 1.46634 0.26236 1.09861 0.40547 43 3.67827 1.24464 3.52732 0.41961 47 U - - > 1.38629 1.38629 1.38629 1.38629 0.01896 4.66806 4.66806 1.46634 0.26236 0.06415 2.77850 44 4.29475 1.67622 4.32369 0.24076 48 U - - > 1.38629 1.38629 1.38629 1.38629 0.01485 4.91030 4.91030 1.46634 0.26236 1.09861 0.40547 45 2.18186 1.32874 3.16310 0.54462 49 U - - > 1.38629 1.38629 1.38629 1.38629 0.01485 4.91030 4.91030 1.46634 0.26236 1.09861 0.40547 46 2.67140 0.48788 2.45431 1.46535 50 C - - > 1.38629 1.38629 1.38629 1.38629 0.01485 4.91030 4.91030 1.46634 0.26236 1.09861 0.40547 47 3.62153 1.14708 3.40563 0.47400 51 U - - > 1.38629 1.38629 1.38629 1.38629 0.01485 4.91030 4.91030 1.46634 0.26236 1.09861 0.40547 48 3.39597 0.71492 3.15473 0.83330 52 c - - > 1.38629 1.38629 1.38629 1.38629 0.01485 4.91030 4.91030 1.46634 0.26236 1.09861 0.40547 49 1.62724 2.29509 0.84361 1.29967 53 g - - > 1.38629 1.38629 1.38629 1.38629 0.01485 4.91030 4.91030 1.46634 0.26236 1.09861 0.40547 50 2.25941 0.57764 2.90139 1.27504 54 C - - > 1.38629 1.38629 1.38629 1.38629 0.01485 4.91030 4.91030 1.46634 0.26236 1.09861 0.40547 51 3.57215 0.24564 2.85354 2.02450 55 C - - > 1.38629 1.38629 1.38629 1.38629 0.01485 4.91030 4.91030 1.46634 0.26236 1.09861 0.40547 52 5.10364 4.19525 4.91558 0.02889 56 U - - > 1.38629 1.38629 1.38629 1.38629 0.01485 4.91030 4.91030 1.46634 0.26236 1.09861 0.40547 53 3.97087 0.32200 3.73579 1.45849 57 C - - > 1.38629 1.38629 1.38629 1.38629 0.01485 4.91030 4.91030 1.46634 0.26236 1.09861 0.40547 54 4.47996 3.26819 4.47802 0.06269 58 U - - > 1.38629 1.38629 1.38629 1.38629 0.01485 4.91030 4.91030 1.46634 0.26236 1.09861 0.40547 55 2.43159 0.26074 4.02734 2.08911 59 C - - > 1.38629 1.38629 1.38629 1.38629 0.01485 4.91030 4.91030 1.46634 0.26236 1.09861 0.40547 56 0.45467 2.14293 1.54411 3.36587 60 A - - > 1.38629 1.38629 1.38629 1.38629 0.01485 4.91030 4.91030 1.46634 0.26236 1.09861 0.40547 57 2.70055 0.15324 3.80149 2.94560 61 C - - > 1.38629 1.38629 1.38629 1.38629 0.01485 4.91030 4.91030 1.46634 0.26236 1.09861 0.40547 58 0.40004 2.52905 3.11158 1.58258 62 A - - : 1.38629 1.38629 1.38629 1.38629 0.05942 4.91030 2.98947 1.46634 0.26236 1.09861 0.40547 59 1.26632 3.32781 0.50252 2.56063 63 G - - : 1.38629 1.38629 1.38629 1.38629 0.01552 4.86641 4.86641 1.46634 0.26236 2.17778 0.12024 60 3.63053 2.55663 4.14221 0.12778 64 U - - : 1.38629 1.38629 1.38629 1.38629 0.08107 2.55271 * 0.18864 1.76077 0.00000 * //