INFERNAL1/a [1.1.5 | Sep 2023] NAME mir-960 ACC RF03377 DESC mir-960 microRNA precursor family STATES 283 NODES 61 CLEN 93 W 111 ALPH RNA RF no CONS yes MAP yes DATE Tue Jul 9 07:59:10 2024 COM [1] /hps/software/users/agb/rfam/bin/cmbuild -F CM SEED COM [2] /hps/software/users/agb/rfam/bin/cmcalibrate --cpu 8 /nfs/production/agb/rfam/15/rescan/families/RF03377/CM PBEGIN 0.05 PEND 0.05 WBETA 1e-07 QDBBETA1 1e-07 QDBBETA2 1e-15 N2OMEGA 1.52588e-05 N3OMEGA 1.52588e-05 ELSELF -0.08926734 NSEQ 2 EFFN 0.753906 CKSUM 1149371858 NULL 0.000 0.000 0.000 0.000 GA 100.00 TC 112.40 NC 84.70 EFP7GF -6.4426 0.71874 ECMLC 0.66196 -4.64454 3.50364 1600000 264041 0.004545 ECMGC 0.44379 -14.11528 -2.31758 1600000 75145 0.005323 ECMLI 0.63715 -2.85645 5.24766 1600000 209730 0.005722 ECMGI 0.47573 -8.00818 2.04481 1600000 47763 0.008375 CM [ ROOT 0 ] - - - - - - S 0 -1 0 1 4 1 1 111 131 -6.362 -6.569 -0.081 -4.983 IL 1 1 2 1 4 1 36 114 135 -1.686 -2.369 -1.117 -4.855 0.000 0.000 0.000 0.000 IR 2 2 3 2 3 1 35 113 134 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 1 ] 1 - G - - - ML 3 2 3 5 5 1 36 111 131 -6.638 -0.054 -6.454 -6.666 -7.558 -0.485 -1.492 1.256 -0.886 D 4 2 3 5 5 0 29 109 130 -4.959 -0.803 -4.221 -2.596 -2.508 IL 5 5 3 5 5 1 34 111 131 -2.408 -0.496 -4.087 -5.920 -5.193 0.000 0.000 0.000 0.000 [ MATP 2 ] 2 93 G C - - MP 6 5 3 10 6 2 36 110 130 -8.911 -8.850 -0.024 -7.627 -7.906 -8.301 -3.734 -2.626 -3.789 0.829 -3.813 -4.250 0.598 -3.917 -3.590 3.252 -4.009 -0.311 0.171 -3.788 -1.397 -2.680 ML 7 5 3 10 6 1 30 108 129 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 8 5 3 10 6 1 30 108 128 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 9 5 3 10 6 0 24 105 126 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 10 10 5 10 6 1 32 109 130 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 11 11 6 11 5 1 32 109 129 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 3 ] 3 92 g c - - MP 12 11 6 16 6 2 34 108 128 -8.911 -8.850 -0.024 -7.627 -7.906 -8.301 -3.051 -2.120 -3.160 1.404 -3.398 -4.198 0.878 -3.269 -3.010 2.108 -3.512 2.012 0.512 -3.487 -1.058 -2.009 ML 13 11 6 16 6 1 29 106 127 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 14 11 6 16 6 1 28 106 127 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 15 11 6 16 6 0 24 103 124 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 16 16 5 16 6 1 31 107 128 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 17 17 6 17 5 1 31 107 127 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 4 ] 4 91 u a - - MP 18 17 6 22 6 2 32 106 126 -8.911 -8.850 -0.024 -7.627 -7.906 -8.301 -3.333 -3.078 -3.251 0.548 -2.408 -3.881 1.893 -3.028 -3.270 1.021 -3.676 -0.985 2.624 -3.501 -0.104 -2.161 ML 19 17 6 22 6 1 28 104 125 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 20 17 6 22 6 1 27 104 125 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 21 17 6 22 6 0 23 102 122 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 22 22 5 22 6 1 30 105 126 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 23 23 6 23 5 1 30 105 125 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 5 ] 5 90 u a - - MP 24 23 6 28 6 2 31 104 124 -8.911 -8.850 -0.024 -7.627 -7.906 -8.301 -3.333 -3.078 -3.251 0.548 -2.408 -3.881 1.893 -3.028 -3.270 1.021 -3.676 -0.985 2.624 -3.501 -0.104 -2.161 ML 25 23 6 28 6 1 27 103 123 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 26 23 6 28 6 1 26 102 123 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 27 23 6 28 6 0 23 100 121 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 28 28 5 28 6 1 29 103 124 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 29 29 6 29 5 1 29 103 124 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 6 ] 6 89 u a - - MP 30 29 6 34 4 2 29 102 122 -6.362 -6.569 -0.081 -4.983 -3.333 -3.078 -3.251 0.548 -2.408 -3.881 1.893 -3.028 -3.270 1.021 -3.676 -0.985 2.624 -3.501 -0.104 -2.161 ML 31 29 6 34 4 1 26 102 122 -3.758 -3.940 -0.507 -2.670 0.368 -0.385 -0.191 0.094 MR 32 29 6 34 4 1 24 101 122 -4.809 -3.838 -1.706 -0.766 0.368 -0.385 -0.191 0.094 D 33 29 6 34 4 0 22 100 121 -4.568 -4.250 -2.265 -0.520 IL 34 34 5 34 4 1 28 103 124 -1.686 -2.369 -1.117 -4.855 0.000 0.000 0.000 0.000 IR 35 35 6 35 3 1 27 102 123 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 7 ] 7 - U - - - ML 36 35 6 38 3 1 27 99 120 -7.861 -0.026 -6.179 -0.578 -0.758 -1.242 1.212 D 37 35 6 38 3 0 22 98 118 -5.620 -0.734 -1.403 IL 38 38 3 38 3 1 26 100 120 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 8 ] - 88 - C - - MR 39 38 3 41 5 1 27 98 119 -6.638 -0.054 -6.454 -6.666 -7.558 -0.581 1.064 -1.332 -0.246 D 40 38 3 41 5 0 19 97 117 -5.352 -0.707 -2.978 -4.409 -2.404 IR 41 41 3 41 5 1 24 99 119 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 9 ] 8 87 g c - - MP 42 41 3 46 6 2 27 97 118 -8.911 -8.850 -0.024 -7.627 -7.906 -8.301 -3.051 -2.120 -3.160 1.404 -3.398 -4.198 0.878 -3.269 -3.010 2.108 -3.512 2.012 0.512 -3.487 -1.058 -2.009 ML 43 41 3 46 6 1 21 96 116 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 44 41 3 46 6 1 21 96 116 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 45 41 3 46 6 0 15 93 114 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 46 46 5 46 6 1 23 97 117 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 47 47 6 47 5 1 23 97 117 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 10 ] 9 86 u a - - MP 48 47 6 52 6 2 26 95 116 -8.911 -8.850 -0.024 -7.627 -7.906 -8.301 -3.333 -3.078 -3.251 0.548 -2.408 -3.881 1.893 -3.028 -3.270 1.021 -3.676 -0.985 2.624 -3.501 -0.104 -2.161 ML 49 47 6 52 6 1 20 94 114 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 50 47 6 52 6 1 20 94 114 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 51 47 6 52 6 0 15 91 112 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 52 52 5 52 6 1 22 95 115 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 53 53 6 53 5 1 22 95 115 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 11 ] 10 85 a u - - MP 54 53 6 58 6 2 24 93 114 -8.911 -8.850 -0.024 -7.627 -7.906 -8.301 -3.127 -2.349 -3.176 2.549 -3.165 -4.206 1.109 -3.237 -3.105 1.845 -3.613 0.039 0.674 -3.512 -0.844 -2.059 ML 55 53 6 58 6 1 20 92 112 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 56 53 6 58 6 1 19 92 112 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 57 53 6 58 6 0 14 89 110 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 58 58 5 58 6 1 21 93 113 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 59 59 6 59 5 1 21 93 113 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 12 ] 11 84 C G - - MP 60 59 6 64 6 2 22 91 112 -8.911 -8.850 -0.024 -7.627 -7.906 -8.301 -3.600 -3.379 -3.434 0.276 -2.411 -3.962 3.080 -3.112 -3.466 0.741 -3.812 -1.309 1.176 -3.719 -0.109 -2.344 ML 61 59 6 64 6 1 19 90 110 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 62 59 6 64 6 1 18 90 110 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 63 59 6 64 6 0 14 87 108 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 64 64 5 64 6 1 20 91 111 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 65 65 6 65 5 1 20 91 111 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 13 ] 12 83 C G - - MP 66 65 6 70 6 2 20 89 110 -8.911 -8.850 -0.024 -7.627 -7.906 -8.301 -3.600 -3.379 -3.434 0.276 -2.411 -3.962 3.080 -3.112 -3.466 0.741 -3.812 -1.309 1.176 -3.719 -0.109 -2.344 ML 67 65 6 70 6 1 18 88 109 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 68 65 6 70 6 1 16 88 108 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 69 65 6 70 6 0 14 86 107 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 70 70 5 70 6 1 19 89 109 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 71 71 6 71 5 1 19 89 109 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 14 ] 13 82 a u - - MP 72 71 6 76 4 2 18 87 108 -6.362 -6.569 -0.081 -4.983 -3.127 -2.349 -3.176 2.549 -3.165 -4.206 1.109 -3.237 -3.105 1.845 -3.613 0.039 0.674 -3.512 -0.844 -2.059 ML 73 71 6 76 4 1 16 87 108 -3.758 -3.940 -0.507 -2.670 0.368 -0.385 -0.191 0.094 MR 74 71 6 76 4 1 15 87 107 -4.809 -3.838 -1.706 -0.766 0.368 -0.385 -0.191 0.094 D 75 71 6 76 4 0 13 86 106 -4.568 -4.250 -2.265 -0.520 IL 76 76 5 76 4 1 18 89 109 -1.686 -2.369 -1.117 -4.855 0.000 0.000 0.000 0.000 IR 77 77 6 77 3 1 17 88 108 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 15 ] 14 - C - - - ML 78 77 6 80 3 1 17 85 105 -7.429 -0.030 -6.083 -0.581 1.064 -1.332 -0.246 D 79 77 6 80 3 0 13 83 104 -6.174 -1.687 -0.566 IL 80 80 3 80 3 1 16 87 107 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 16 ] 15 - A - - - ML 81 80 3 83 3 1 16 84 104 -7.861 -0.026 -6.179 1.357 -1.347 -1.076 -0.809 D 82 80 3 83 3 0 12 83 103 -5.620 -0.734 -1.403 IL 83 83 3 83 3 1 15 85 105 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 17 ] - 81 - A - - MR 84 83 3 86 3 1 15 83 103 -7.861 -0.026 -6.179 1.357 -1.347 -1.076 -0.809 D 85 83 3 86 3 0 10 81 101 -6.390 -1.568 -0.620 IR 86 86 3 86 3 1 14 84 104 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 18 ] - 80 - C - - MR 87 86 3 89 5 1 14 82 102 -6.638 -0.054 -6.454 -6.666 -7.558 -0.581 1.064 -1.332 -0.246 D 88 86 3 89 5 0 10 80 101 -5.352 -0.707 -2.978 -4.409 -2.404 IR 89 89 3 89 5 1 13 82 102 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 19 ] 16 79 u a - - MP 90 89 3 94 6 2 14 81 101 -8.911 -8.850 -0.024 -7.627 -7.906 -8.301 -3.333 -3.078 -3.251 0.548 -2.408 -3.881 1.893 -3.028 -3.270 1.021 -3.676 -0.985 2.624 -3.501 -0.104 -2.161 ML 91 89 3 94 6 1 11 80 100 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 92 89 3 94 6 1 9 80 100 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 93 89 3 94 6 0 6 78 98 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 94 94 5 94 6 1 12 81 101 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 95 95 6 95 5 1 12 80 100 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 20 ] 17 78 u a - - MP 96 95 6 100 4 2 12 79 99 -6.362 -6.569 -0.081 -4.983 -3.333 -3.078 -3.251 0.548 -2.408 -3.881 1.893 -3.028 -3.270 1.021 -3.676 -0.985 2.624 -3.501 -0.104 -2.161 ML 97 95 6 100 4 1 10 79 99 -3.758 -3.940 -0.507 -2.670 0.368 -0.385 -0.191 0.094 MR 98 95 6 100 4 1 7 78 99 -4.809 -3.838 -1.706 -0.766 0.368 -0.385 -0.191 0.094 D 99 95 6 100 4 0 6 77 98 -4.568 -4.250 -2.265 -0.520 IL 100 100 5 100 4 1 11 80 100 -1.686 -2.369 -1.117 -4.855 0.000 0.000 0.000 0.000 IR 101 101 6 101 3 1 11 79 100 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 21 ] 18 - C - - - ML 102 101 6 104 3 1 11 76 96 -7.429 -0.030 -6.083 -0.581 1.064 -1.332 -0.246 D 103 101 6 104 3 0 5 75 95 -6.174 -1.687 -0.566 IL 104 104 3 104 3 1 10 78 98 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 22 ] 19 - a - - - ML 105 104 3 107 3 1 10 75 95 -7.861 -0.026 -6.179 0.484 -0.624 -0.772 0.451 D 106 104 3 107 3 0 5 74 94 -5.620 -0.734 -1.403 IL 107 107 3 107 3 1 9 76 96 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 23 ] - 77 - U - - MR 108 107 3 110 3 1 9 74 94 -7.861 -0.026 -6.179 -0.578 -0.758 -1.242 1.212 D 109 107 3 110 3 0 3 73 93 -6.390 -1.568 -0.620 IR 110 110 3 110 3 1 8 75 95 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 24 ] - 76 - U - - MR 111 110 3 113 5 1 9 73 93 -6.638 -0.054 -6.454 -6.666 -7.558 -0.578 -0.758 -1.242 1.212 D 112 110 3 113 5 0 2 72 92 -5.352 -0.707 -2.978 -4.409 -2.404 IR 113 113 3 113 5 1 6 74 94 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 25 ] 20 75 g c - - MP 114 113 3 118 6 2 9 72 92 -8.911 -8.850 -0.024 -7.627 -7.906 -8.301 -3.051 -2.120 -3.160 1.404 -3.398 -4.198 0.878 -3.269 -3.010 2.108 -3.512 2.012 0.512 -3.487 -1.058 -2.009 ML 115 113 3 118 6 1 4 71 91 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 116 113 3 118 6 1 4 71 91 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 117 113 3 118 6 0 0 68 88 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 118 118 5 118 6 1 5 72 92 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 119 119 6 119 5 1 6 72 92 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 26 ] 21 74 a u - - MP 120 119 6 124 6 2 8 70 90 -8.911 -8.850 -0.024 -7.627 -7.906 -8.301 -3.127 -2.349 -3.176 2.549 -3.165 -4.206 1.109 -3.237 -3.105 1.845 -3.613 0.039 0.674 -3.512 -0.844 -2.059 ML 121 119 6 124 6 1 4 69 89 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 122 119 6 124 6 1 3 69 89 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 123 119 6 124 6 0 0 67 87 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 124 124 5 124 6 1 5 70 90 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 125 125 6 125 5 1 5 70 90 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 27 ] 22 73 G C - - MP 126 125 6 130 6 2 6 68 88 -8.911 -8.850 -0.024 -7.627 -7.906 -8.301 -3.734 -2.626 -3.789 0.829 -3.813 -4.250 0.598 -3.917 -3.590 3.252 -4.009 -0.311 0.171 -3.788 -1.397 -2.680 ML 127 125 6 130 6 1 3 67 87 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 128 125 6 130 6 1 2 67 87 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 129 125 6 130 6 0 0 65 85 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 130 130 5 130 6 1 4 68 88 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 131 131 6 131 5 1 4 68 88 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 28 ] 23 72 u a - - MP 132 131 6 136 4 2 4 66 86 -6.362 -6.569 -0.081 -4.983 -3.333 -3.078 -3.251 0.548 -2.408 -3.881 1.893 -3.028 -3.270 1.021 -3.676 -0.985 2.624 -3.501 -0.104 -2.161 ML 133 131 6 136 4 1 2 66 86 -3.758 -3.940 -0.507 -2.670 0.368 -0.385 -0.191 0.094 MR 134 131 6 136 4 1 1 66 86 -4.809 -3.838 -1.706 -0.766 0.368 -0.385 -0.191 0.094 D 135 131 6 136 4 0 0 65 85 -4.568 -4.250 -2.265 -0.520 IL 136 136 5 136 4 1 3 68 88 -1.686 -2.369 -1.117 -4.855 0.000 0.000 0.000 0.000 IR 137 137 6 137 3 1 3 67 87 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 29 ] 24 - A - - - ML 138 137 6 140 3 1 3 64 83 -7.861 -0.026 -6.179 1.357 -1.347 -1.076 -0.809 D 139 137 6 140 3 0 0 63 82 -5.620 -0.734 -1.403 IL 140 140 3 140 3 1 2 65 84 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 30 ] - 71 - C - - MR 141 140 3 143 5 1 3 63 82 -6.638 -0.054 -6.454 -6.666 -7.558 -0.581 1.064 -1.332 -0.246 D 142 140 3 143 5 0 0 61 81 -5.352 -0.707 -2.978 -4.409 -2.404 IR 143 143 3 143 5 1 1 63 83 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 31 ] 25 70 u a - - MP 144 143 3 148 6 2 4 62 81 -8.911 -8.850 -0.024 -7.627 -7.906 -8.301 -3.333 -3.078 -3.251 0.548 -2.408 -3.881 1.893 -3.028 -3.270 1.021 -3.676 -0.985 2.624 -3.501 -0.104 -2.161 ML 145 143 3 148 6 1 1 60 80 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 146 143 3 148 6 1 1 60 80 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 147 143 3 148 6 0 0 58 77 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 148 148 5 148 6 1 1 61 81 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 149 149 6 149 5 1 1 61 81 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 32 ] 26 69 c g - - MP 150 149 6 154 6 2 4 60 79 -8.911 -8.850 -0.024 -7.627 -7.906 -8.301 -3.193 -3.044 -3.088 0.529 -2.177 -3.666 2.079 -2.840 -3.123 0.923 -3.509 -1.059 1.392 -3.348 2.000 -2.040 ML 151 149 6 154 6 1 1 58 78 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 152 149 6 154 6 1 1 58 78 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 153 149 6 154 6 0 0 56 75 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 154 154 5 154 6 1 1 59 79 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 155 155 6 155 5 1 1 59 79 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 33 ] 27 68 C G - - MP 156 155 6 160 6 2 4 58 77 -8.911 -8.850 -0.024 -7.627 -7.906 -8.301 -3.600 -3.379 -3.434 0.276 -2.411 -3.962 3.080 -3.112 -3.466 0.741 -3.812 -1.309 1.176 -3.719 -0.109 -2.344 ML 157 155 6 160 6 1 1 56 76 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 158 155 6 160 6 1 1 56 76 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 159 155 6 160 6 0 0 54 73 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 160 160 5 160 6 1 1 57 77 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 161 161 6 161 5 1 1 57 77 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 34 ] 28 67 C G - - MP 162 161 6 166 6 2 4 56 75 -8.911 -8.850 -0.024 -7.627 -7.906 -8.301 -3.600 -3.379 -3.434 0.276 -2.411 -3.962 3.080 -3.112 -3.466 0.741 -3.812 -1.309 1.176 -3.719 -0.109 -2.344 ML 163 161 6 166 6 1 1 54 74 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 164 161 6 166 6 1 1 54 74 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 165 161 6 166 6 0 0 52 71 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 166 166 5 166 6 1 1 55 75 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 167 167 6 167 5 1 1 55 75 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 35 ] 29 66 a u - - MP 168 167 6 172 6 2 3 54 73 -8.911 -8.850 -0.024 -7.627 -7.906 -8.301 -3.127 -2.349 -3.176 2.549 -3.165 -4.206 1.109 -3.237 -3.105 1.845 -3.613 0.039 0.674 -3.512 -0.844 -2.059 ML 169 167 6 172 6 1 1 52 72 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 170 167 6 172 6 1 1 52 72 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 171 167 6 172 6 0 0 50 69 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 172 172 5 172 6 1 1 53 73 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 173 173 6 173 5 1 1 53 73 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 36 ] 30 65 G C - - MP 174 173 6 178 6 2 3 52 71 -8.911 -8.850 -0.024 -7.627 -7.906 -8.301 -3.734 -2.626 -3.789 0.829 -3.813 -4.250 0.598 -3.917 -3.590 3.252 -4.009 -0.311 0.171 -3.788 -1.397 -2.680 ML 175 173 6 178 6 1 1 50 70 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 176 173 6 178 6 1 1 50 70 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 177 173 6 178 6 0 0 48 67 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 178 178 5 178 6 1 1 51 71 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 179 179 6 179 5 1 1 51 71 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 37 ] 31 64 g c - - MP 180 179 6 184 6 2 3 50 69 -8.911 -8.850 -0.024 -7.627 -7.906 -8.301 -2.925 -2.121 -3.026 2.005 -3.256 -4.061 0.968 -3.196 -2.952 2.073 -3.469 1.257 0.654 -3.297 -0.950 -1.925 ML 181 179 6 184 6 1 1 48 68 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 182 179 6 184 6 1 1 48 68 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 183 179 6 184 6 0 0 46 65 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 184 184 5 184 6 1 1 49 69 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 185 185 6 185 5 1 1 49 69 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 38 ] 32 63 c g - - MP 186 185 6 190 6 2 3 48 67 -8.911 -8.850 -0.024 -7.627 -7.906 -8.301 -3.045 -2.932 -3.004 0.637 -2.201 -3.640 2.056 -2.831 -3.041 1.023 -3.465 -0.983 2.046 -3.215 1.156 -1.965 ML 187 185 6 190 6 1 1 46 66 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 188 185 6 190 6 1 1 46 66 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 189 185 6 190 6 0 0 44 64 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 190 190 5 190 6 1 1 47 67 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 191 191 6 191 5 1 1 47 67 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 39 ] 33 62 c g - - MP 192 191 6 196 6 2 2 46 65 -8.911 -8.850 -0.024 -7.627 -7.906 -8.301 -3.193 -3.044 -3.088 0.529 -2.177 -3.666 2.079 -2.840 -3.123 0.923 -3.509 -1.059 1.392 -3.348 2.000 -2.040 ML 193 191 6 196 6 1 1 45 65 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 194 191 6 196 6 1 1 45 64 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 195 191 6 196 6 0 0 43 63 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 196 196 5 196 6 1 1 46 65 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 197 197 6 197 5 1 1 45 65 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 40 ] 34 61 G C - - MP 198 197 6 202 4 2 2 44 63 -6.362 -6.569 -0.081 -4.983 -3.734 -2.626 -3.789 0.829 -3.813 -4.250 0.598 -3.917 -3.590 3.252 -4.009 -0.311 0.171 -3.788 -1.397 -2.680 ML 199 197 6 202 4 1 1 44 64 -3.758 -3.940 -0.507 -2.670 0.368 -0.385 -0.191 0.094 MR 200 197 6 202 4 1 1 43 63 -4.809 -3.838 -1.706 -0.766 0.368 -0.385 -0.191 0.094 D 201 197 6 202 4 0 0 42 62 -4.568 -4.250 -2.265 -0.520 IL 202 202 5 202 4 1 1 45 65 -1.686 -2.369 -1.117 -4.855 0.000 0.000 0.000 0.000 IR 203 203 6 203 3 1 1 44 64 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 41 ] 35 - C - - - ML 204 203 6 206 3 1 1 41 61 -7.861 -0.026 -6.179 -0.581 1.064 -1.332 -0.246 D 205 203 6 206 3 0 0 40 59 -5.620 -0.734 -1.403 IL 206 206 3 206 3 1 1 42 61 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 42 ] - 60 - A - - MR 207 206 3 209 5 1 1 40 60 -6.638 -0.054 -6.454 -6.666 -7.558 1.357 -1.347 -1.076 -0.809 D 208 206 3 209 5 0 0 39 58 -5.352 -0.707 -2.978 -4.409 -2.404 IR 209 209 3 209 5 1 1 41 60 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 43 ] 36 59 a u - - MP 210 209 3 214 6 2 2 39 59 -8.911 -8.850 -0.024 -7.627 -7.906 -8.301 -3.127 -2.349 -3.176 2.549 -3.165 -4.206 1.109 -3.237 -3.105 1.845 -3.613 0.039 0.674 -3.512 -0.844 -2.059 ML 211 209 3 214 6 1 1 38 57 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 212 209 3 214 6 1 1 38 57 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 213 209 3 214 6 0 0 35 55 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 214 214 5 214 6 1 1 39 58 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 215 215 6 215 5 1 1 39 58 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 44 ] 37 58 c g - - MP 216 215 6 220 6 2 2 37 57 -8.911 -8.850 -0.024 -7.627 -7.906 -8.301 -3.045 -2.932 -3.004 0.637 -2.201 -3.640 2.056 -2.831 -3.041 1.023 -3.465 -0.983 2.046 -3.215 1.156 -1.965 ML 217 215 6 220 6 1 1 36 55 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 218 215 6 220 6 1 1 36 55 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 219 215 6 220 6 0 0 33 53 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 220 220 5 220 6 1 1 37 56 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 221 221 6 221 5 1 1 37 56 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 45 ] 38 57 a u - - MP 222 221 6 226 6 2 2 35 55 -8.911 -8.850 -0.024 -7.627 -7.906 -8.301 -3.127 -2.349 -3.176 2.549 -3.165 -4.206 1.109 -3.237 -3.105 1.845 -3.613 0.039 0.674 -3.512 -0.844 -2.059 ML 223 221 6 226 6 1 1 34 53 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 224 221 6 226 6 1 1 34 53 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 225 221 6 226 6 0 0 32 51 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 226 226 5 226 6 1 1 35 54 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 227 227 6 227 5 1 1 35 54 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 46 ] 39 56 G C - - MP 228 227 6 232 6 2 2 33 53 -8.911 -8.850 -0.024 -7.627 -7.906 -8.301 -3.734 -2.626 -3.789 0.829 -3.813 -4.250 0.598 -3.917 -3.590 3.252 -4.009 -0.311 0.171 -3.788 -1.397 -2.680 ML 229 227 6 232 6 1 1 32 52 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 230 227 6 232 6 1 1 32 52 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 231 227 6 232 6 0 0 30 50 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 232 232 5 232 6 1 1 33 52 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 233 233 6 233 5 1 1 33 52 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 47 ] 40 55 C G - - MP 234 233 6 238 4 2 2 31 50 -6.362 -6.569 -0.081 -4.983 -3.600 -3.379 -3.434 0.276 -2.411 -3.962 3.080 -3.112 -3.466 0.741 -3.812 -1.309 1.176 -3.719 -0.109 -2.344 ML 235 233 6 238 4 1 1 32 51 -3.758 -3.940 -0.507 -2.670 0.368 -0.385 -0.191 0.094 MR 236 233 6 238 4 1 1 31 50 -4.809 -3.838 -1.706 -0.766 0.368 -0.385 -0.191 0.094 D 237 233 6 238 4 0 0 30 49 -4.568 -4.250 -2.265 -0.520 IL 238 238 5 238 4 1 1 33 52 -1.686 -2.369 -1.117 -4.855 0.000 0.000 0.000 0.000 IR 239 239 6 239 3 1 1 32 51 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 48 ] 41 - U - - - ML 240 239 6 242 3 1 1 28 48 -7.429 -0.030 -6.083 -0.578 -0.758 -1.242 1.212 D 241 239 6 242 3 0 0 27 46 -6.174 -1.687 -0.566 IL 242 242 3 242 3 1 1 31 50 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 49 ] 42 - U - - - ML 243 242 3 245 3 1 1 27 46 -7.861 -0.026 -6.179 -0.578 -0.758 -1.242 1.212 D 244 242 3 245 3 0 0 26 45 -5.620 -0.734 -1.403 IL 245 245 3 245 3 1 1 28 47 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 50 ] - 54 - U - - MR 246 245 3 248 3 1 1 26 45 -7.861 -0.026 -6.179 -0.578 -0.758 -1.242 1.212 D 247 245 3 248 3 0 0 25 44 -6.390 -1.568 -0.620 IR 248 248 3 248 3 1 1 27 46 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 51 ] - 53 - U - - MR 249 248 3 251 5 1 1 25 44 -6.638 -0.054 -6.454 -6.666 -7.558 -0.578 -0.758 -1.242 1.212 D 250 248 3 251 5 0 0 24 43 -5.352 -0.707 -2.978 -4.409 -2.404 IR 251 251 3 251 5 1 1 26 45 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 52 ] 43 52 u a - - MP 252 251 3 256 6 2 2 24 43 -8.911 -8.850 -0.024 -7.627 -7.906 -8.301 -3.333 -3.078 -3.251 0.548 -2.408 -3.881 1.893 -3.028 -3.270 1.021 -3.676 -0.985 2.624 -3.501 -0.104 -2.161 ML 253 251 3 256 6 1 1 24 43 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 254 251 3 256 6 1 1 23 42 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 255 251 3 256 6 0 0 22 41 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 256 256 5 256 6 1 1 24 43 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 257 257 6 257 5 1 1 24 43 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 53 ] 44 51 g c - - MP 258 257 6 262 4 2 2 22 41 -6.362 -6.569 -0.081 -4.983 -3.051 -2.120 -3.160 1.404 -3.398 -4.198 0.878 -3.269 -3.010 2.108 -3.512 2.012 0.512 -3.487 -1.058 -2.009 ML 259 257 6 262 4 1 1 23 42 -3.758 -3.940 -0.507 -2.670 0.368 -0.385 -0.191 0.094 MR 260 257 6 262 4 1 1 22 41 -4.809 -3.838 -1.706 -0.766 0.368 -0.385 -0.191 0.094 D 261 257 6 262 4 0 0 21 40 -4.568 -4.250 -2.265 -0.520 IL 262 262 5 262 4 1 1 24 43 -1.686 -2.369 -1.117 -4.855 0.000 0.000 0.000 0.000 IR 263 263 6 263 3 1 1 23 42 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 54 ] 45 - U - - - ML 264 263 6 266 3 1 1 19 38 -7.429 -0.030 -6.083 -0.578 -0.758 -1.242 1.212 D 265 263 6 266 3 0 0 18 37 -6.174 -1.687 -0.566 IL 266 266 3 266 3 1 1 22 41 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 55 ] 46 - G - - - ML 267 266 3 269 3 1 1 18 37 -7.429 -0.030 -6.083 -0.485 -1.492 1.256 -0.886 D 268 266 3 269 3 0 0 17 36 -6.174 -1.687 -0.566 IL 269 269 3 269 3 1 1 21 40 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 56 ] 47 - C - - - ML 270 269 3 272 3 1 1 17 35 -7.429 -0.030 -6.083 -0.581 1.064 -1.332 -0.246 D 271 269 3 272 3 0 0 16 35 -6.174 -1.687 -0.566 IL 272 272 3 272 3 1 1 20 39 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 57 ] 48 - U - - - ML 273 272 3 275 3 1 1 15 34 -7.429 -0.030 -6.083 -0.578 -0.758 -1.242 1.212 D 274 272 3 275 3 0 0 15 33 -6.174 -1.687 -0.566 IL 275 275 3 275 3 1 1 19 37 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 58 ] 49 - A - - - ML 276 275 3 278 3 1 1 13 32 -7.429 -0.030 -6.083 1.357 -1.347 -1.076 -0.809 D 277 275 3 278 3 0 0 13 32 -6.174 -1.687 -0.566 IL 278 278 3 278 3 1 1 18 36 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 59 ] 50 - C - - - ML 279 278 3 281 2 1 1 1 1 * 0.000 -0.581 1.064 -1.332 -0.246 D 280 278 3 281 2 0 0 0 0 * 0.000 IL 281 281 3 281 2 1 1 13 28 -1.823 -0.479 0.000 0.000 0.000 0.000 [ END 60 ] - - - - - - E 282 281 3 -1 0 0 0 0 0 // HMMER3/f [3.4 | Aug 2023] NAME mir-960 ACC RF03377 DESC mir-960 microRNA precursor family LENG 93 MAXL 192 ALPH RNA RF no MM no CONS yes CS yes MAP yes DATE Tue Jul 9 07:59:10 2024 COM [1] /hps/software/users/agb/rfam/bin/cmbuild -F CM SEED COM [2] /hps/software/users/agb/rfam/bin/cmcalibrate --cpu 8 /nfs/production/agb/rfam/15/rescan/families/RF03377/CM NSEQ 2 EFFN 1.597656 CKSUM 1149371858 STATS LOCAL MSV -8.3771 0.71874 STATS LOCAL VITERBI -10.0902 0.71874 STATS LOCAL FORWARD -3.7314 0.71874 HMM A C G U m->m m->i m->d i->m i->i d->m d->d COMPO 1.50138 1.43150 1.40607 1.22716 1.38629 1.38629 1.38629 1.38629 0.05212 3.67333 3.67333 1.46634 0.26236 0.00000 * 1 2.28616 3.09952 0.24302 2.67335 1 G - - : 1.38629 1.38629 1.38629 1.38629 0.05212 3.67333 3.67333 1.46634 0.26236 1.09861 0.40547 2 2.33859 2.82705 0.24581 2.77609 2 G - - < 1.38629 1.38629 1.38629 1.38629 0.05212 3.67333 3.67333 1.46634 0.26236 1.09861 0.40547 3 1.76152 2.49806 0.42330 2.39587 3 G - - < 1.38629 1.38629 1.38629 1.38629 0.05212 3.67333 3.67333 1.46634 0.26236 1.09861 0.40547 4 2.57310 1.61870 2.27047 0.47436 4 U - - < 1.38629 1.38629 1.38629 1.38629 0.05212 3.67333 3.67333 1.46634 0.26236 1.09861 0.40547 5 2.57258 1.61871 2.27029 0.47445 5 U - - < 1.38629 1.38629 1.38629 1.38629 0.05212 3.67333 3.67333 1.46634 0.26236 1.09861 0.40547 6 2.57203 1.61871 2.27010 0.47455 6 U - - < 1.38629 1.38629 1.38629 1.38629 0.05212 3.67333 3.67333 1.46634 0.26236 1.09861 0.40547 7 2.24990 2.27720 2.74898 0.31742 7 U - - - 1.38629 1.38629 1.38629 1.38629 0.05212 3.67333 3.67333 1.46634 0.26236 1.09861 0.40547 8 1.76000 2.49575 0.42446 2.39252 8 G - - < 1.38629 1.38629 1.38629 1.38629 0.05212 3.67333 3.67333 1.46634 0.26236 1.09861 0.40547 9 2.57075 1.61873 2.26966 0.47478 9 U - - < 1.38629 1.38629 1.38629 1.38629 0.05212 3.67333 3.67333 1.46634 0.26236 1.09861 0.40547 10 0.54186 2.33167 1.51889 2.28035 10 A - - < 1.38629 1.38629 1.38629 1.38629 0.05212 3.67333 3.67333 1.46634 0.26236 1.09861 0.40547 11 2.81161 0.35783 2.53230 1.82495 11 C - - < 1.38629 1.38629 1.38629 1.38629 0.05212 3.67333 3.67333 1.46634 0.26236 1.09861 0.40547 12 2.81130 0.35788 2.53218 1.82491 12 C - - < 1.38629 1.38629 1.38629 1.38629 0.05212 3.67333 3.67333 1.46634 0.26236 1.09861 0.40547 13 0.54193 2.33154 1.51889 2.28013 13 A - - < 1.38629 1.38629 1.38629 1.38629 0.05212 3.67333 3.67333 1.46634 0.26236 1.09861 0.40547 14 2.37450 0.32802 2.93676 2.01325 14 C - - - 1.38629 1.38629 1.38629 1.38629 0.05212 3.67333 3.67333 1.46634 0.26236 1.09861 0.40547 15 0.23907 2.84674 2.61008 2.51231 15 A - - - 1.38629 1.38629 1.38629 1.38629 0.05212 3.67333 3.67333 1.46634 0.26236 1.09861 0.40547 16 2.56757 1.61876 2.26855 0.47534 16 U - - < 1.38629 1.38629 1.38629 1.38629 0.05212 3.67333 3.67333 1.46634 0.26236 1.09861 0.40547 17 2.57060 1.61873 2.26960 0.47480 17 U - - < 1.38629 1.38629 1.38629 1.38629 0.05212 3.67333 3.67333 1.46634 0.26236 1.09861 0.40547 18 2.37450 0.32802 2.93676 2.01325 18 C - - - 1.38629 1.38629 1.38629 1.38629 0.05212 3.67333 3.67333 1.46634 0.26236 1.09861 0.40547 19 1.01697 1.93087 2.06929 1.00236 19 u - - - 1.38629 1.38629 1.38629 1.38629 0.05212 3.67333 3.67333 1.46634 0.26236 1.09861 0.40547 20 1.76000 2.49576 0.42446 2.39254 20 G - - < 1.38629 1.38629 1.38629 1.38629 0.05212 3.67333 3.67333 1.46634 0.26236 1.09861 0.40547 21 0.54200 2.33138 1.51889 2.27987 21 A - - < 1.38629 1.38629 1.38629 1.38629 0.05212 3.67333 3.67333 1.46634 0.26236 1.09861 0.40547 22 2.33753 2.82604 0.24614 2.77460 22 G - - < 1.38629 1.38629 1.38629 1.38629 0.05212 3.67333 3.67333 1.46634 0.26236 1.09861 0.40547 23 2.57188 1.61872 2.27005 0.47458 23 U - - < 1.38629 1.38629 1.38629 1.38629 0.05212 3.67333 3.67333 1.46634 0.26236 1.09861 0.40547 24 0.23907 2.84674 2.61008 2.51231 24 A - - - 1.38629 1.38629 1.38629 1.38629 0.05212 3.67333 3.67333 1.46634 0.26236 1.09861 0.40547 25 2.56796 1.61876 2.26869 0.47527 25 U - - < 1.38629 1.38629 1.38629 1.38629 0.05212 3.67333 3.67333 1.46634 0.26236 1.09861 0.40547 26 2.58158 1.40103 2.32078 0.54506 26 U - - < 1.38629 1.38629 1.38629 1.38629 0.05212 3.67333 3.67333 1.46634 0.26236 1.09861 0.40547 27 2.81150 0.35785 2.53226 1.82494 27 C - - < 1.38629 1.38629 1.38629 1.38629 0.05212 3.67333 3.67333 1.46634 0.26236 1.09861 0.40547 28 2.81166 0.35782 2.53232 1.82496 28 C - - < 1.38629 1.38629 1.38629 1.38629 0.05212 3.67333 3.67333 1.46634 0.26236 1.09861 0.40547 29 0.54187 2.33165 1.51889 2.28032 29 A - - < 1.38629 1.38629 1.38629 1.38629 0.05212 3.67333 3.67333 1.46634 0.26236 1.09861 0.40547 30 2.33721 2.82573 0.24624 2.77415 30 G - - < 1.38629 1.38629 1.38629 1.38629 0.05212 3.67333 3.67333 1.46634 0.26236 1.09861 0.40547 31 1.07928 2.31888 0.80189 2.17777 31 g - - < 1.38629 1.38629 1.38629 1.38629 0.05212 3.67333 3.67333 1.46634 0.26236 1.09861 0.40547 32 2.29678 1.35895 2.03944 0.66868 32 U - - < 1.38629 1.38629 1.38629 1.38629 0.05212 3.67333 3.67333 1.46634 0.26236 1.09861 0.40547 33 2.58104 1.40106 2.32058 0.54515 33 U - - < 1.38629 1.38629 1.38629 1.38629 0.05212 3.67333 3.67333 1.46634 0.26236 1.09861 0.40547 34 2.33628 2.82485 0.24652 2.77285 34 G - - < 1.38629 1.38629 1.38629 1.38629 0.05212 3.67333 3.67333 1.46634 0.26236 1.09861 0.40547 35 2.37450 0.32802 2.93676 2.01325 35 C - - - 1.38629 1.38629 1.38629 1.38629 0.05212 3.67333 3.67333 1.46634 0.26236 1.09861 0.40547 36 0.54247 2.33036 1.51888 2.27818 36 A - - < 1.38629 1.38629 1.38629 1.38629 0.05212 3.67333 3.67333 1.46634 0.26236 1.09861 0.40547 37 2.29671 1.35896 2.03942 0.66869 37 U - - < 1.38629 1.38629 1.38629 1.38629 0.05212 3.67333 3.67333 1.46634 0.26236 1.09861 0.40547 38 0.54189 2.33162 1.51889 2.28027 38 A - - < 1.38629 1.38629 1.38629 1.38629 0.05212 3.67333 3.67333 1.46634 0.26236 1.09861 0.40547 39 2.33754 2.82605 0.24614 2.77462 39 G - - < 1.38629 1.38629 1.38629 1.38629 0.05212 3.67333 3.67333 1.46634 0.26236 1.09861 0.40547 40 2.81120 0.35790 2.53214 1.82489 40 C - - < 1.38629 1.38629 1.38629 1.38629 0.05212 3.67333 3.67333 1.46634 0.26236 1.09861 0.40547 41 2.24990 2.27720 2.74898 0.31742 41 U - - - 1.38629 1.38629 1.38629 1.38629 0.05212 3.67333 3.67333 1.46634 0.26236 1.09861 0.40547 42 2.24990 2.27720 2.74898 0.31742 42 U - - - 1.38629 1.38629 1.38629 1.38629 0.05212 3.67333 3.67333 1.46634 0.26236 1.09861 0.40547 43 2.56762 1.61876 2.26857 0.47533 43 U - - < 1.38629 1.38629 1.38629 1.38629 0.05212 3.67333 3.67333 1.46634 0.26236 1.09861 0.40547 44 1.76076 2.49691 0.42388 2.39420 44 G - - < 1.38629 1.38629 1.38629 1.38629 0.05212 3.67333 3.67333 1.46634 0.26236 1.09861 0.40547 45 2.24990 2.27720 2.74898 0.31742 45 U - - _ 1.38629 1.38629 1.38629 1.38629 0.05212 3.67333 3.67333 1.46634 0.26236 1.09861 0.40547 46 2.28616 3.09952 0.24302 2.67335 46 G - - _ 1.38629 1.38629 1.38629 1.38629 0.05212 3.67333 3.67333 1.46634 0.26236 1.09861 0.40547 47 2.37450 0.32802 2.93676 2.01325 47 C - - _ 1.38629 1.38629 1.38629 1.38629 0.05212 3.67333 3.67333 1.46634 0.26236 1.09861 0.40547 48 2.24990 2.27720 2.74898 0.31742 48 U - - _ 1.38629 1.38629 1.38629 1.38629 0.05212 3.67333 3.67333 1.46634 0.26236 1.09861 0.40547 49 0.23907 2.84674 2.61008 2.51231 49 A - - _ 1.38629 1.38629 1.38629 1.38629 0.05212 3.67333 3.67333 1.46634 0.26236 1.09861 0.40547 50 2.37450 0.32802 2.93676 2.01325 50 C - - _ 1.38629 1.38629 1.38629 1.38629 0.05212 3.67333 3.67333 1.46634 0.26236 1.09861 0.40547 51 2.61836 1.58540 2.30546 0.47401 51 U - - > 1.38629 1.38629 1.38629 1.38629 0.05212 3.67333 3.67333 1.46634 0.26236 1.09861 0.40547 52 0.54014 2.44805 1.45516 2.32782 52 A - - > 1.38629 1.38629 1.38629 1.38629 0.05212 3.67333 3.67333 1.46634 0.26236 1.09861 0.40547 53 2.24990 2.27720 2.74898 0.31742 53 U - - - 1.38629 1.38629 1.38629 1.38629 0.05212 3.67333 3.67333 1.46634 0.26236 1.09861 0.40547 54 2.24990 2.27720 2.74898 0.31742 54 U - - - 1.38629 1.38629 1.38629 1.38629 0.05212 3.67333 3.67333 1.46634 0.26236 1.09861 0.40547 55 2.09849 2.69838 0.31012 2.56808 55 G - - > 1.38629 1.38629 1.38629 1.38629 0.05212 3.67333 3.67333 1.46634 0.26236 1.09861 0.40547 56 2.99481 0.28737 2.65620 2.04406 56 C - - > 1.38629 1.38629 1.38629 1.38629 0.05212 3.67333 3.67333 1.46634 0.26236 1.09861 0.40547 57 2.51387 1.76986 2.14826 0.45886 57 U - - > 1.38629 1.38629 1.38629 1.38629 0.05212 3.67333 3.67333 1.46634 0.26236 1.09861 0.40547 58 1.13559 2.20306 0.81518 2.07350 58 g - - > 1.38629 1.38629 1.38629 1.38629 0.05212 3.67333 3.67333 1.46634 0.26236 1.09861 0.40547 59 2.51631 1.76996 2.14898 0.45839 59 U - - > 1.38629 1.38629 1.38629 1.38629 0.05212 3.67333 3.67333 1.46634 0.26236 1.09861 0.40547 60 0.23907 2.84674 2.61008 2.51231 60 A - - - 1.38629 1.38629 1.38629 1.38629 0.05212 3.67333 3.67333 1.46634 0.26236 1.09861 0.40547 61 2.98937 0.28811 2.65408 2.04300 61 C - - > 1.38629 1.38629 1.38629 1.38629 0.05212 3.67333 3.67333 1.46634 0.26236 1.09861 0.40547 62 1.88845 2.49105 0.40211 2.33344 62 G - - > 1.38629 1.38629 1.38629 1.38629 0.05212 3.67333 3.67333 1.46634 0.26236 1.09861 0.40547 63 1.13559 2.20199 0.81592 2.07186 63 g - - > 1.38629 1.38629 1.38629 1.38629 0.05212 3.67333 3.67333 1.46634 0.26236 1.09861 0.40547 64 2.39905 1.46881 2.12546 0.58050 64 U - - > 1.38629 1.38629 1.38629 1.38629 0.05212 3.67333 3.67333 1.46634 0.26236 1.09861 0.40547 65 2.99237 0.28770 2.65525 2.04359 65 C - - > 1.38629 1.38629 1.38629 1.38629 0.05212 3.67333 3.67333 1.46634 0.26236 1.09861 0.40547 66 2.51226 1.76979 2.14779 0.45918 66 U - - > 1.38629 1.38629 1.38629 1.38629 0.05212 3.67333 3.67333 1.46634 0.26236 1.09861 0.40547 67 2.09897 2.69892 0.30991 2.56881 67 G - - > 1.38629 1.38629 1.38629 1.38629 0.05212 3.67333 3.67333 1.46634 0.26236 1.09861 0.40547 68 2.09949 2.69951 0.30969 2.56960 68 G - - > 1.38629 1.38629 1.38629 1.38629 0.05212 3.67333 3.67333 1.46634 0.26236 1.09861 0.40547 69 1.89031 2.49321 0.40100 2.33631 69 G - - > 1.38629 1.38629 1.38629 1.38629 0.05212 3.67333 3.67333 1.46634 0.26236 1.09861 0.40547 70 0.54012 2.44809 1.45516 2.32788 70 A - - > 1.38629 1.38629 1.38629 1.38629 0.05212 3.67333 3.67333 1.46634 0.26236 1.09861 0.40547 71 2.37450 0.32802 2.93676 2.01325 71 C - - - 1.38629 1.38629 1.38629 1.38629 0.05212 3.67333 3.67333 1.46634 0.26236 1.09861 0.40547 72 0.54064 2.44668 1.45523 2.32587 72 A - - > 1.38629 1.38629 1.38629 1.38629 0.05212 3.67333 3.67333 1.46634 0.26236 1.09861 0.40547 73 2.99670 0.28711 2.65693 2.04443 73 C - - > 1.38629 1.38629 1.38629 1.38629 0.05212 3.67333 3.67333 1.46634 0.26236 1.09861 0.40547 74 2.51511 1.76991 2.14863 0.45862 74 U - - > 1.38629 1.38629 1.38629 1.38629 0.05212 3.67333 3.67333 1.46634 0.26236 1.09861 0.40547 75 2.61998 1.58537 2.30603 0.47374 75 U - - > 1.38629 1.38629 1.38629 1.38629 0.05212 3.67333 3.67333 1.46634 0.26236 1.09861 0.40547 76 2.24990 2.27720 2.74898 0.31742 76 U - - - 1.38629 1.38629 1.38629 1.38629 0.05212 3.67333 3.67333 1.46634 0.26236 1.09861 0.40547 77 2.24990 2.27720 2.74898 0.31742 77 U - - - 1.38629 1.38629 1.38629 1.38629 0.05212 3.67333 3.67333 1.46634 0.26236 1.09861 0.40547 78 0.54034 2.44750 1.45519 2.32703 78 A - - > 1.38629 1.38629 1.38629 1.38629 0.05212 3.67333 3.67333 1.46634 0.26236 1.09861 0.40547 79 0.54014 2.44804 1.45516 2.32781 79 A - - > 1.38629 1.38629 1.38629 1.38629 0.05212 3.67333 3.67333 1.46634 0.26236 1.09861 0.40547 80 2.37450 0.32802 2.93676 2.01325 80 C - - - 1.38629 1.38629 1.38629 1.38629 0.05212 3.67333 3.67333 1.46634 0.26236 1.09861 0.40547 81 0.23907 2.84674 2.61008 2.51231 81 A - - - 1.38629 1.38629 1.38629 1.38629 0.05212 3.67333 3.67333 1.46634 0.26236 1.09861 0.40547 82 2.51159 1.76976 2.14759 0.45931 82 U - - > 1.38629 1.38629 1.38629 1.38629 0.05212 3.67333 3.67333 1.46634 0.26236 1.09861 0.40547 83 2.09853 2.69842 0.31010 2.56813 83 G - - > 1.38629 1.38629 1.38629 1.38629 0.05212 3.67333 3.67333 1.46634 0.26236 1.09861 0.40547 84 2.09896 2.69890 0.30992 2.56879 84 G - - > 1.38629 1.38629 1.38629 1.38629 0.05212 3.67333 3.67333 1.46634 0.26236 1.09861 0.40547 85 2.51397 1.76986 2.14829 0.45885 85 U - - > 1.38629 1.38629 1.38629 1.38629 0.05212 3.67333 3.67333 1.46634 0.26236 1.09861 0.40547 86 0.54033 2.44753 1.45519 2.32707 86 A - - > 1.38629 1.38629 1.38629 1.38629 0.05212 3.67333 3.67333 1.46634 0.26236 1.09861 0.40547 87 2.61997 1.58537 2.30603 0.47374 87 U - - > 1.38629 1.38629 1.38629 1.38629 0.05212 3.67333 3.67333 1.46634 0.26236 1.09861 0.40547 88 2.37450 0.32802 2.93676 2.01325 88 C - - - 1.38629 1.38629 1.38629 1.38629 0.05212 3.67333 3.67333 1.46634 0.26236 1.09861 0.40547 89 0.54084 2.44613 1.45526 2.32508 89 A - - > 1.38629 1.38629 1.38629 1.38629 0.05212 3.67333 3.67333 1.46634 0.26236 1.09861 0.40547 90 0.54081 2.44623 1.45525 2.32523 90 A - - > 1.38629 1.38629 1.38629 1.38629 0.05212 3.67333 3.67333 1.46634 0.26236 1.09861 0.40547 91 0.54081 2.44621 1.45525 2.32520 91 A - - > 1.38629 1.38629 1.38629 1.38629 0.05212 3.67333 3.67333 1.46634 0.26236 1.09861 0.40547 92 2.61393 1.58549 2.30392 0.47475 92 U - - > 1.38629 1.38629 1.38629 1.38629 0.05212 3.67333 3.67333 1.46634 0.26236 1.09861 0.40547 93 2.98797 0.28830 2.65353 2.04273 93 C - - > 1.38629 1.38629 1.38629 1.38629 0.02640 3.64761 * 1.46634 0.26236 0.00000 * //