INFERNAL1/a [1.1.5 | Sep 2023] NAME mir-723 ACC RF03315 DESC mir-723 microRNA precursor family STATES 184 NODES 41 CLEN 60 W 76 ALPH RNA RF no CONS yes MAP yes DATE Sun Jul 7 21:29:11 2024 COM [1] /hps/software/users/agb/rfam/bin/cmbuild -F CM SEED COM [2] /hps/software/users/agb/rfam/bin/cmcalibrate --cpu 8 /nfs/production/agb/rfam/15/rescan/families/RF03315/CM PBEGIN 0.05 PEND 0.05 WBETA 1e-07 QDBBETA1 1e-07 QDBBETA2 1e-15 N2OMEGA 1.52588e-05 N3OMEGA 1.52588e-05 ELSELF -0.08926734 NSEQ 3 EFFN 2.053711 CKSUM 1593589361 NULL 0.000 0.000 0.000 0.000 GA 63.00 TC 63.00 NC 62.90 EFP7GF -9.0709 0.72058 ECMLC 0.62210 -5.51155 3.73246 1600000 377287 0.003181 ECMGC 0.46781 -13.42513 -0.48926 1600000 169899 0.002354 ECMLI 0.60517 -4.14449 4.89646 1600000 285329 0.004206 ECMGI 0.48373 -9.41128 2.32200 1600000 116684 0.003428 CM [ ROOT 0 ] - - - - - - S 0 -1 0 1 4 1 1 76 95 -6.998 -7.205 -0.051 -5.619 IL 1 1 2 1 4 1 11 80 100 -1.686 -2.369 -1.117 -4.855 0.000 0.000 0.000 0.000 IR 2 2 3 2 3 1 11 79 99 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 1 ] 1 - G - - - ML 3 2 3 5 3 1 11 76 95 -8.398 -0.018 -6.716 -1.680 -2.916 1.745 -2.303 D 4 2 3 5 3 0 5 74 94 -5.620 -0.734 -1.403 IL 5 5 3 5 3 1 9 77 96 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 2 ] - 61 - U - - MR 6 5 3 8 3 1 10 75 94 -8.398 -0.018 -6.716 -1.572 -1.554 -2.310 1.642 D 7 5 3 8 3 0 3 73 93 -6.390 -1.568 -0.620 IR 8 8 3 8 3 1 8 76 95 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 3 ] - 60 - C - - MR 9 8 3 11 3 1 9 74 93 -8.398 -0.018 -6.716 -1.855 1.654 -2.682 -1.246 D 10 8 3 11 3 0 2 72 92 -6.390 -1.568 -0.620 IR 11 11 3 11 3 1 7 74 94 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 4 ] - 59 - G - - MR 12 11 3 14 5 1 9 73 92 -7.134 -0.038 -6.950 -7.162 -8.053 -1.680 -2.916 1.745 -2.303 D 13 11 3 14 5 0 2 71 91 -5.352 -0.707 -2.978 -4.409 -2.404 IR 14 14 3 14 5 1 5 73 93 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 5 ] 2 58 g u - - MP 15 14 3 19 6 2 9 72 91 -9.127 -9.066 -0.021 -7.843 -8.122 -8.517 -3.442 -2.373 -3.579 2.208 -4.270 -4.912 0.018 -3.729 -3.380 1.505 -3.914 2.450 -0.236 -4.050 -1.882 -2.375 ML 16 14 3 19 6 1 3 70 90 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 17 14 3 19 6 1 3 70 90 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 18 14 3 19 6 0 0 68 87 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 19 19 5 19 6 1 5 71 91 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 20 20 6 20 5 1 5 71 91 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 6 ] 3 57 C G - - MP 21 20 6 25 6 2 8 70 89 -9.127 -9.066 -0.021 -7.843 -8.122 -8.517 -4.655 -4.570 -4.327 -0.793 -3.022 -4.725 3.582 -3.843 -4.380 -0.567 -4.629 -2.519 0.482 -4.717 -0.731 -3.216 ML 22 20 6 25 6 1 3 68 88 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 23 20 6 25 6 1 3 68 88 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 24 20 6 25 6 0 0 66 86 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 25 25 5 25 6 1 4 69 89 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 26 26 6 26 5 1 4 69 89 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 7 ] 4 56 A U - - MP 27 26 6 31 6 2 6 68 87 -9.127 -9.066 -0.021 -7.843 -8.122 -8.517 -3.878 -2.887 -3.890 3.385 -4.271 -5.342 0.034 -3.926 -3.778 0.985 -4.330 -0.349 -0.383 -4.515 -1.906 -2.719 ML 28 26 6 31 6 1 2 67 87 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 29 26 6 31 6 1 2 67 86 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 30 26 6 31 6 0 0 65 85 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 31 31 5 31 6 1 3 67 87 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 32 32 6 32 5 1 3 67 87 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 8 ] 5 55 G C - - MP 33 32 6 37 4 2 4 66 85 -6.998 -7.205 -0.051 -5.619 -4.837 -3.139 -4.945 0.137 -5.366 -4.731 -0.707 -5.194 -4.389 3.660 -4.720 -0.842 -1.090 -4.530 -2.750 -3.821 ML 34 32 6 37 4 1 2 66 86 -3.758 -3.940 -0.507 -2.670 0.368 -0.385 -0.191 0.094 MR 35 32 6 37 4 1 1 66 85 -4.809 -3.838 -1.706 -0.766 0.368 -0.385 -0.191 0.094 D 36 32 6 37 4 0 0 65 84 -4.568 -4.250 -2.265 -0.520 IL 37 37 5 37 4 1 3 67 87 -1.686 -2.369 -1.117 -4.855 0.000 0.000 0.000 0.000 IR 38 38 6 38 3 1 3 66 86 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 9 ] 6 - c - - - ML 39 38 6 41 3 1 3 63 83 -8.398 -0.018 -6.716 -0.804 0.804 -1.607 0.437 D 40 38 6 41 3 0 0 62 81 -5.620 -0.734 -1.403 IL 41 41 3 41 3 1 2 64 84 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 10 ] - 54 - U - - MR 42 41 3 44 5 1 3 62 82 -7.134 -0.038 -6.950 -7.162 -8.053 -1.572 -1.554 -2.310 1.642 D 43 41 3 44 5 0 0 61 80 -5.352 -0.707 -2.978 -4.409 -2.404 IR 44 44 3 44 5 1 1 63 82 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 11 ] 7 53 U A - - MP 45 44 3 49 6 2 4 61 81 -9.127 -9.066 -0.021 -7.843 -8.122 -8.517 -4.302 -4.130 -4.128 -0.417 -3.046 -4.682 1.284 -3.750 -4.132 -0.179 -4.499 -2.025 3.379 -4.449 -0.720 -2.945 ML 46 44 3 49 6 1 1 60 79 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 47 44 3 49 6 1 1 60 79 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 48 44 3 49 6 0 0 57 77 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 49 49 5 49 6 1 1 61 80 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 50 50 6 50 5 1 1 61 80 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 12 ] 8 52 U A - - MP 51 50 6 55 6 2 4 59 79 -9.127 -9.066 -0.021 -7.843 -8.122 -8.517 -4.302 -4.130 -4.128 -0.417 -3.046 -4.682 1.284 -3.750 -4.132 -0.179 -4.499 -2.025 3.379 -4.449 -0.720 -2.945 ML 52 50 6 55 6 1 1 58 77 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 53 50 6 55 6 1 1 58 77 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 54 50 6 55 6 0 0 56 75 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 55 55 5 55 6 1 1 59 78 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 56 56 6 56 5 1 1 59 78 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 13 ] 9 51 U A - - MP 57 56 6 61 6 2 3 57 77 -9.127 -9.066 -0.021 -7.843 -8.122 -8.517 -4.302 -4.130 -4.128 -0.417 -3.046 -4.682 1.284 -3.750 -4.132 -0.179 -4.499 -2.025 3.379 -4.449 -0.720 -2.945 ML 58 56 6 61 6 1 1 57 76 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 59 56 6 61 6 1 1 56 76 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 60 56 6 61 6 0 0 55 74 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 61 61 5 61 6 1 1 57 77 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 62 62 6 62 5 1 1 57 76 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 14 ] 10 50 g u - - MP 63 62 6 67 4 2 2 55 75 -6.998 -7.205 -0.051 -5.619 -3.442 -2.373 -3.579 2.208 -4.270 -4.912 0.018 -3.729 -3.380 1.505 -3.914 2.450 -0.236 -4.050 -1.882 -2.375 ML 64 62 6 67 4 1 1 56 75 -3.758 -3.940 -0.507 -2.670 0.368 -0.385 -0.191 0.094 MR 65 62 6 67 4 1 1 55 75 -4.809 -3.838 -1.706 -0.766 0.368 -0.385 -0.191 0.094 D 66 62 6 67 4 0 0 54 74 -4.568 -4.250 -2.265 -0.520 IL 67 67 5 67 4 1 1 57 77 -1.686 -2.369 -1.117 -4.855 0.000 0.000 0.000 0.000 IR 68 68 6 68 3 1 1 56 76 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 15 ] 11 - A - - - ML 69 68 6 71 3 1 1 53 72 -8.011 -0.020 -6.665 1.738 -2.466 -2.088 -2.018 D 70 68 6 71 3 0 0 52 71 -6.174 -1.687 -0.566 IL 71 71 3 71 3 1 1 55 75 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 16 ] 12 - A - - - ML 72 71 3 74 3 1 1 52 71 -8.398 -0.018 -6.716 1.738 -2.466 -2.088 -2.018 D 73 71 3 74 3 0 0 51 70 -5.620 -0.734 -1.403 IL 74 74 3 74 3 1 1 53 72 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 17 ] - 49 - a - - MR 75 74 3 77 3 1 1 51 70 -8.398 -0.018 -6.716 0.866 -0.962 -1.089 0.255 D 76 74 3 77 3 0 0 49 68 -6.390 -1.568 -0.620 IR 77 77 3 77 3 1 1 52 71 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 18 ] - 48 - g - - MR 78 77 3 80 5 1 1 50 69 -7.134 -0.038 -6.950 -7.162 -8.053 0.375 -1.542 0.881 -0.950 D 79 77 3 80 5 0 0 48 68 -5.352 -0.707 -2.978 -4.409 -2.404 IR 80 80 3 80 5 1 1 50 69 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 19 ] 13 47 U A - - MP 81 80 3 85 6 2 2 49 68 -9.127 -9.066 -0.021 -7.843 -8.122 -8.517 -4.302 -4.130 -4.128 -0.417 -3.046 -4.682 1.284 -3.750 -4.132 -0.179 -4.499 -2.025 3.379 -4.449 -0.720 -2.945 ML 82 80 3 85 6 1 1 47 66 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 83 80 3 85 6 1 1 47 66 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 84 80 3 85 6 0 0 45 64 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 85 85 5 85 6 1 1 48 68 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 86 86 6 86 5 1 1 48 67 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 20 ] 14 46 G C - - MP 87 86 6 91 6 2 2 47 66 -9.127 -9.066 -0.021 -7.843 -8.122 -8.517 -4.837 -3.139 -4.945 0.137 -5.366 -4.731 -0.707 -5.194 -4.389 3.660 -4.720 -0.842 -1.090 -4.530 -2.750 -3.821 ML 88 86 6 91 6 1 1 45 64 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 89 86 6 91 6 1 1 45 64 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 90 86 6 91 6 0 0 43 62 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 91 91 5 91 6 1 1 46 66 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 92 92 6 92 5 1 1 46 65 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 21 ] 15 45 A U - - MP 93 92 6 97 6 2 2 45 64 -9.127 -9.066 -0.021 -7.843 -8.122 -8.517 -3.878 -2.887 -3.890 3.385 -4.271 -5.342 0.034 -3.926 -3.778 0.985 -4.330 -0.349 -0.383 -4.515 -1.906 -2.719 ML 94 92 6 97 6 1 1 43 62 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 95 92 6 97 6 1 1 43 62 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 96 92 6 97 6 0 0 41 60 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 97 97 5 97 6 1 1 44 64 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 98 98 6 98 5 1 1 44 63 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 22 ] 16 44 U A - - MP 99 98 6 103 6 2 2 43 62 -9.127 -9.066 -0.021 -7.843 -8.122 -8.517 -4.302 -4.130 -4.128 -0.417 -3.046 -4.682 1.284 -3.750 -4.132 -0.179 -4.499 -2.025 3.379 -4.449 -0.720 -2.945 ML 100 98 6 103 6 1 1 41 61 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 101 98 6 103 6 1 1 41 61 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 102 98 6 103 6 0 0 39 58 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 103 103 5 103 6 1 1 42 62 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 104 104 6 104 5 1 1 42 61 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 23 ] 17 43 G C - - MP 105 104 6 109 6 2 2 41 60 -9.127 -9.066 -0.021 -7.843 -8.122 -8.517 -4.837 -3.139 -4.945 0.137 -5.366 -4.731 -0.707 -5.194 -4.389 3.660 -4.720 -0.842 -1.090 -4.530 -2.750 -3.821 ML 106 104 6 109 6 1 1 40 59 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 107 104 6 109 6 1 1 40 59 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 108 104 6 109 6 0 0 38 57 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 109 109 5 109 6 1 1 41 60 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 110 110 6 110 5 1 1 40 59 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 24 ] 18 42 U A - - MP 111 110 6 115 4 2 2 39 58 -6.998 -7.205 -0.051 -5.619 -4.302 -4.130 -4.128 -0.417 -3.046 -4.682 1.284 -3.750 -4.132 -0.179 -4.499 -2.025 3.379 -4.449 -0.720 -2.945 ML 112 110 6 115 4 1 1 39 59 -3.758 -3.940 -0.507 -2.670 0.368 -0.385 -0.191 0.094 MR 113 110 6 115 4 1 1 39 58 -4.809 -3.838 -1.706 -0.766 0.368 -0.385 -0.191 0.094 D 114 110 6 115 4 0 0 38 57 -4.568 -4.250 -2.265 -0.520 IL 115 115 5 115 4 1 1 41 60 -1.686 -2.369 -1.117 -4.855 0.000 0.000 0.000 0.000 IR 116 116 6 116 3 1 1 40 59 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 25 ] 19 - U - - - ML 117 116 6 119 3 1 1 36 55 -8.011 -0.020 -6.665 -1.572 -1.554 -2.310 1.642 D 118 116 6 119 3 0 0 35 54 -6.174 -1.687 -0.566 IL 119 119 3 119 3 1 1 39 58 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 26 ] 20 - A - - - ML 120 119 3 122 5 1 1 35 54 -7.134 -0.038 -6.950 -7.162 -8.053 1.738 -2.466 -2.088 -2.018 D 121 119 3 122 5 0 0 34 53 -4.959 -0.803 -4.221 -2.596 -2.508 IL 122 122 3 122 5 1 1 35 54 -2.408 -0.496 -4.087 -5.920 -5.193 0.000 0.000 0.000 0.000 [ MATP 27 ] 21 41 C G - - MP 123 122 3 127 6 2 2 34 53 -9.127 -3.667 -0.138 -7.843 -8.122 -8.517 -4.655 -4.570 -4.327 -0.793 -3.022 -4.725 3.582 -3.843 -4.380 -0.567 -4.629 -2.519 0.482 -4.717 -0.731 -3.216 ML 124 122 3 127 6 1 1 32 51 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 125 122 3 127 6 1 1 32 51 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 126 122 3 127 6 0 0 30 49 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 127 127 5 127 6 1 1 33 52 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 128 128 6 128 5 1 1 33 52 -2.958 -0.320 -6.469 -4.637 -5.743 0.000 0.000 0.000 0.000 [ MATP 28 ] 22 39 U A - - MP 129 128 6 133 6 2 2 32 51 -9.127 -9.066 -0.021 -7.843 -8.122 -8.517 -4.302 -4.130 -4.128 -0.417 -3.046 -4.682 1.284 -3.750 -4.132 -0.179 -4.499 -2.025 3.379 -4.449 -0.720 -2.945 ML 130 128 6 133 6 1 1 30 49 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 131 128 6 133 6 1 1 30 49 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 132 128 6 133 6 0 0 28 47 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 133 133 5 133 6 1 1 32 50 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 134 134 6 134 5 1 1 31 50 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 29 ] 23 38 u a - - MP 135 134 6 139 6 2 2 30 49 -9.127 -9.066 -0.021 -7.843 -8.122 -8.517 -3.495 -3.473 -3.429 0.163 -2.499 -4.047 1.789 -3.174 -3.449 0.379 -3.868 -1.539 2.621 -3.670 1.365 -2.361 ML 136 134 6 139 6 1 1 28 47 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 137 134 6 139 6 1 1 28 47 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 138 134 6 139 6 0 0 26 45 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 139 139 5 139 6 1 1 30 48 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 140 140 6 140 5 1 1 29 48 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 30 ] 24 37 c g - - MP 141 140 6 145 6 2 2 28 47 -9.127 -9.066 -0.021 -7.843 -8.122 -8.517 -3.798 -3.782 -3.632 -0.076 -2.511 -4.151 2.918 -3.250 -3.656 0.131 -4.017 -1.826 1.093 -3.919 1.603 -2.533 ML 142 140 6 145 6 1 1 26 45 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 143 140 6 145 6 1 1 26 45 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 144 140 6 145 6 0 0 24 43 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 145 145 5 145 6 1 1 28 46 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 146 146 6 146 5 1 1 27 46 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 31 ] 25 36 U A - - MP 147 146 6 151 6 2 2 26 45 -9.127 -9.066 -0.021 -7.843 -8.122 -8.517 -4.302 -4.130 -4.128 -0.417 -3.046 -4.682 1.284 -3.750 -4.132 -0.179 -4.499 -2.025 3.379 -4.449 -0.720 -2.945 ML 148 146 6 151 6 1 1 25 44 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 149 146 6 151 6 1 1 25 43 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 150 146 6 151 6 0 0 22 41 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 151 151 5 151 6 1 1 26 44 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 152 152 6 152 5 1 1 25 44 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 32 ] 26 35 u a - - MP 153 152 6 157 6 2 2 24 43 -9.127 -9.066 -0.021 -7.843 -8.122 -8.517 -3.483 -3.464 -3.418 0.168 -2.490 -4.035 1.796 -3.165 -3.439 0.382 -3.857 -1.534 2.571 -3.660 1.460 -2.353 ML 154 152 6 157 6 1 1 23 42 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 155 152 6 157 6 1 1 23 42 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 156 152 6 157 6 0 0 22 40 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 157 157 5 157 6 1 1 24 43 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 158 158 6 158 5 1 1 23 42 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 33 ] 27 34 u g - - MP 159 158 6 163 4 2 2 22 41 -6.998 -7.205 -0.051 -5.619 0.580 -2.455 -2.510 0.728 -2.177 -3.290 1.617 -2.648 -2.556 0.832 -3.074 -0.824 1.187 -2.681 1.831 -1.653 ML 160 158 6 163 4 1 1 23 42 -3.758 -3.940 -0.507 -2.670 0.368 -0.385 -0.191 0.094 MR 161 158 6 163 4 1 1 22 41 -4.809 -3.838 -1.706 -0.766 0.368 -0.385 -0.191 0.094 D 162 158 6 163 4 0 0 21 40 -4.568 -4.250 -2.265 -0.520 IL 163 163 5 163 4 1 1 24 43 -1.686 -2.369 -1.117 -4.855 0.000 0.000 0.000 0.000 IR 164 164 6 164 3 1 1 23 42 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 34 ] 28 - U - - - ML 165 164 6 167 3 1 1 19 37 -8.011 -0.020 -6.665 -1.572 -1.554 -2.310 1.642 D 166 164 6 167 3 0 0 18 37 -6.174 -1.687 -0.566 IL 167 167 3 167 3 1 1 22 41 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 35 ] 29 - u - - - ML 168 167 3 170 3 1 1 17 36 -8.011 -0.020 -6.665 -0.288 -0.002 -0.188 0.383 D 169 167 3 170 3 0 0 17 36 -6.174 -1.687 -0.566 IL 170 170 3 170 3 1 1 21 40 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 36 ] 30 - A - - - ML 171 170 3 173 3 1 1 16 35 -8.011 -0.020 -6.665 1.738 -2.466 -2.088 -2.018 D 172 170 3 173 3 0 0 16 34 -6.174 -1.687 -0.566 IL 173 173 3 173 3 1 1 20 38 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 37 ] 31 - a - - - ML 174 173 3 176 3 1 1 15 33 -8.011 -0.020 -6.665 0.958 -0.174 -1.142 -0.480 D 175 173 3 176 3 0 0 15 33 -6.174 -1.687 -0.566 IL 176 176 3 176 3 1 1 19 37 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 38 ] 32 - u - - - ML 177 176 3 179 3 1 1 13 31 -8.011 -0.020 -6.665 0.231 -0.861 -1.160 0.871 D 178 176 3 179 3 0 0 13 32 -6.174 -1.687 -0.566 IL 179 179 3 179 3 1 1 18 36 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 39 ] 33 - U - - - ML 180 179 3 182 2 1 1 1 1 * 0.000 -1.572 -1.554 -2.310 1.642 D 181 179 3 182 2 0 0 0 0 * 0.000 IL 182 182 3 182 2 1 1 13 28 -1.823 -0.479 0.000 0.000 0.000 0.000 [ END 40 ] - - - - - - E 183 182 3 -1 0 0 0 0 0 // HMMER3/f [3.4 | Aug 2023] NAME mir-723 ACC RF03315 DESC mir-723 microRNA precursor family LENG 60 MAXL 142 ALPH RNA RF no MM no CONS yes CS yes MAP yes DATE Sun Jul 7 21:29:11 2024 COM [1] /hps/software/users/agb/rfam/bin/cmbuild -F CM SEED COM [2] /hps/software/users/agb/rfam/bin/cmcalibrate --cpu 8 /nfs/production/agb/rfam/15/rescan/families/RF03315/CM NSEQ 3 EFFN 2.815430 CKSUM 1593589361 STATS LOCAL MSV -8.3564 0.72058 STATS LOCAL VITERBI -8.5837 0.72058 STATS LOCAL FORWARD -3.4491 0.72058 HMM A C G U m->m m->i m->d i->m i->i d->m d->d COMPO 1.27472 1.71393 1.49407 1.15240 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 0.00000 * 1 2.91939 3.82540 0.11561 3.39923 1 G - - : 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 2 1.10407 2.98357 0.58710 2.78172 2 G - - < 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 3 3.42304 0.19163 3.22240 2.28359 3 C - - < 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 4 0.26269 3.04391 2.02673 2.96412 4 A - - < 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 5 2.72579 3.45754 0.13987 3.39546 5 G - - < 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 6 2.11222 0.74606 2.69079 1.08776 6 c - - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 7 3.22421 2.09523 3.00067 0.23900 7 U - - < 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 8 3.22525 2.09531 3.00116 0.23890 8 U - - < 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 9 3.22479 2.09527 3.00094 0.23894 9 U - - < 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 10 1.10408 2.98309 0.58720 2.78114 10 G - - < 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 11 0.12277 3.45569 3.15905 3.18211 11 A - - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 12 0.12277 3.45569 3.15905 3.18211 12 A - - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 13 3.22393 2.09520 3.00053 0.23902 13 U - - < 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 14 2.72640 3.45833 0.13975 3.39655 14 G - - < 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 15 0.26272 3.04374 2.02670 2.96389 15 A - - < 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 16 3.22371 2.09519 3.00042 0.23904 16 U - - < 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 17 2.72502 3.45655 0.14001 3.39411 17 G - - < 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 18 3.22151 2.09502 2.99937 0.23925 18 U - - < 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 19 2.81488 2.74444 3.33974 0.17393 19 U - - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 20 0.12277 3.45569 3.15905 3.18211 20 A - - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 21 3.42617 0.19136 3.22398 2.28416 21 C - - < 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 22 3.21789 2.09473 2.99763 0.23959 22 U - - < 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 23 2.62456 1.55474 2.40626 0.46819 23 U - - < 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 24 2.82182 0.64528 2.60997 1.07162 24 C - - < 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 25 3.21904 2.09482 2.99819 0.23948 25 U - - < 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 26 2.62336 1.55178 2.40625 0.46933 26 U - - < 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 27 1.46051 1.62395 2.07617 0.80888 27 u - - < 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 28 2.81488 2.74444 3.33974 0.17393 28 U - - _ 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 29 1.65562 1.35502 1.48990 1.12182 29 u - - _ 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 30 0.12277 3.45569 3.15905 3.18211 30 A - - _ 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 31 0.65981 1.48521 2.31254 1.84780 31 A - - _ 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 32 1.22687 2.08745 2.30009 0.72870 32 u - - _ 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 33 2.81488 2.74444 3.33974 0.17393 33 U - - _ 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 34 1.29448 2.25210 0.71508 2.02776 34 g - - > 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 35 0.84181 2.57158 0.91270 2.39451 35 a - - > 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 36 0.27194 3.18330 1.93107 2.96308 36 A - - > 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 37 2.02819 2.76924 0.31456 2.58224 37 G - - > 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 38 0.80927 2.56892 0.95000 2.39187 38 a - - > 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 39 0.27399 3.17055 1.92926 2.94842 39 A - - > 1.38629 1.38629 1.38629 1.38629 0.27494 1.50890 3.95124 0.16567 1.87947 1.09861 0.40547 40 2.55645 3.37912 0.16677 3.17134 41 G - - > 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 41 0.27126 3.18760 1.93167 2.96804 42 A - - > 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 42 3.58686 0.16673 3.29652 2.42055 43 C - - > 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 43 0.27093 3.18968 1.93196 2.97043 44 A - - > 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 44 3.19166 2.34676 2.85470 0.21611 45 U - - > 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 45 3.60099 0.16571 3.30301 2.42319 46 C - - > 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 46 0.26989 3.19627 1.93289 2.97802 47 A - - > 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 47 1.12252 2.63652 0.70089 2.23693 48 g - - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 48 0.73708 2.15044 2.24518 1.20682 49 a - - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 49 2.98979 1.89167 2.77661 0.30567 50 U - - > 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 50 0.27068 3.19126 1.93218 2.97225 51 A - - > 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 51 0.27035 3.19336 1.93248 2.97467 52 A - - > 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 52 0.26988 3.19632 1.93289 2.97808 53 A - - > 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 53 2.81488 2.74444 3.33974 0.17393 54 U - - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 54 3.59061 0.16646 3.29825 2.42125 55 C - - > 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 55 3.19191 2.34680 2.85480 0.21609 56 U - - > 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 56 2.56691 3.39446 0.16433 3.18916 57 G - - > 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 57 2.99984 1.89217 2.78127 0.30449 58 U - - > 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 58 2.91939 3.82540 0.11561 3.39923 59 G - - : 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 59 3.10826 0.15552 3.68260 2.60113 60 C - - : 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 60 2.81488 2.74444 3.33974 0.17393 61 U - - : 1.38629 1.38629 1.38629 1.38629 0.01980 3.93183 * 1.46634 0.26236 0.00000 * //